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ONTOLOGY REPORT - ANNOTATIONS

Term:DNA-templated transcription elongation
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Accession:GO:0006354 term browser browse the term
Definition:The extension of an RNA molecule after transcription initiation and promoter clearance at a DNA-dependent RNA polymerase promoter by the addition of ribonucleotides catalyzed by an RNA polymerase.
Synonyms:exact_synonym: DNA-dependent transcription, elongation;   transcriptional elongation, DNA-dependent
 narrow_synonym: RNA elongation from bacterial-type RNA polymerase promoter;   transcription elongation from bacterial-type RNA polymerase promoter
 broad_synonym: RNA elongation
 alt_id: GO:0001124


show annotations for term's descendants           Sort by:
DNA-templated transcription elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ell3 elongation factor for RNA polymerase II 3 involved_in ISO (PMID:10882741) RGD PMID:10882741 NCBI chr 3:128,866,755...128,870,896
Ensembl chr 3:128,864,777...128,870,852 		JBrowse link
G Supt5h SPT5 homolog, DSIF elongation factor subunit involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:92,714,276...92,745,489
Ensembl chr 1:92,714,281...92,744,445 		JBrowse link
maintenance of transcriptional fidelity during transcription elongation by RNA polymerase II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Polr2i RNA polymerase II subunit I involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:94,610,976...94,612,413
Ensembl chr 1:94,610,942...94,613,000 		JBrowse link
negative regulation of DNA-templated transcription, elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENSRNOG00000068353 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117
G Supt4h1 SPT4 homolog, DSIF elongation factor subunit involved_in ISO
IEA 		(PMID:9450929), (PMID:9857195)
GO_REF:0000117 		RGD
UniProt		 PMID:9450929 PMID:9857195 GO_REF:0000117 NCBI chr10:73,036,560...73,042,821
Ensembl chr10:73,036,343...73,043,088 		JBrowse link
G Supt5h SPT5 homolog, DSIF elongation factor subunit involved_in ISO
IEA 		(PMID:10075709), (PMID:9450929)
GO_REF:0000107 		RGD
Ensembl		 PMID:9450929 PMID:10075709 GO_REF:0000107 NCBI chr 1:92,714,276...92,745,489
Ensembl chr 1:92,714,281...92,744,445 		JBrowse link
G Wdr82 WD repeat domain 82 involved_in ISO
IEA 		(PMID:33913806)
GO_REF:0000117
GO_REF:0000107
(PMID:33767452) 		RGD
UniProt
Ensembl		 PMID:33767452 PMID:33913806 GO_REF:0000107 GO_REF:0000117 NCBI chr 8:115,693,297...115,713,262
Ensembl chr 8:115,693,315...115,713,242 		JBrowse link
G Zc3h4 zinc finger CCCH-type containing 4 involved_in ISO
IEA 		(PMID:33913806)
GO_REF:0000117
GO_REF:0000107
(PMID:33767452) 		RGD
UniProt
Ensembl		 PMID:33767452 PMID:33913806 GO_REF:0000107 GO_REF:0000117 NCBI chr 1:86,234,457...86,271,963
Ensembl chr 1:86,234,457...86,271,963 		JBrowse link
negative regulation of transcription elongation by RNA polymerase II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axin1 axin 1 acts_upstream_of_or_within ISO
IEA 		(PMID:10318824), (PMID:19204372)
GO_REF:0000107 		RGD
Ensembl		 PMID:10318824 PMID:19204372 GO_REF:0000107 NCBI chr10:15,667,894...15,720,092
Ensembl chr10:15,667,958...15,720,092 		JBrowse link
G Cdk9 cyclin-dependent kinase 9 acts_upstream_of_or_within ISO (PMID:27256882) RGD PMID:27256882 NCBI chr 3:36,394,168...36,399,016
Ensembl chr 3:36,394,169...36,399,528 		JBrowse link
G Eapp E2F-associated phosphoprotein acts_upstream_of_or_within ISO
IEA 		(PMID:15716352)
GO_REF:0000107 		RGD
Ensembl		 PMID:15716352 GO_REF:0000107 NCBI chr 6:77,879,634...77,929,653
Ensembl chr 6:77,907,485...77,928,930 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit acts_upstream_of_or_within ISO
IEA 		MGI:2661097 (PMID:19303854)
GO_REF:0000107 		RGD
Ensembl		 PMID:19303854 GO_REF:0000107 NCBI chr 4:77,624,223...77,698,598
Ensembl chr 4:77,624,223...77,687,183 		JBrowse link
G Hexim1 HEXIM P-TEFb complex subunit 1 involved_in ISO
ISS 		(PMID:14580347)
GO_REF:0000024 		RGD
UniProt		 PMID:14580347 GO_REF:0000024 NCBI chr10:88,562,889...88,565,001
Ensembl chr10:88,560,519...88,580,000 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in IEA
ISO 		GO_REF:0000107
(PMID:10490622) 		Ensembl
RGD		 PMID:10490622 GO_REF:0000107 NCBI chr13:92,609,791...92,618,580
Ensembl chr13:92,605,216...92,618,612 		JBrowse link
G Nelfa negative elongation factor complex member A involved_in
acts_upstream_of_or_within 		ISO
IEA
IBA 		(PMID:12612062)
GO_REF:0000107
(PMID:21670248)
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:12612062 PMID:21670248 GO_REF:0000033 GO_REF:0000107 NCBI chr14:81,033,470...81,057,546
Ensembl chr14:81,033,514...81,058,719 		JBrowse link
G Nelfb negative elongation factor complex member B involved_in ISO
IEA
IBA 		(PMID:12612062)
GO_REF:0000107
(PMID:19340312), (PMID:24656816), (PMID:25773599)
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:12612062 PMID:19340312 PMID:24656816 PMID:25773599 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:28,409,045...28,425,564
Ensembl chr 3:28,409,050...28,425,564 		JBrowse link
G Nelfcd negative elongation factor complex member C/D involved_in ISO
IEA
IBA 		(PMID:12612062)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:12612062 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:183,631,968...183,643,088
Ensembl chr 3:183,631,968...183,643,088 		JBrowse link
G Nelfe negative elongation factor complex member E involved_in
acts_upstream_of_or_within 		IBA
ISO
IEA 		GO_REF:0000033
(PMID:12612062), (PMID:27256882)
GO_REF:0000107
(PMID:21670248)
(PMID:31399344) 		GO_Central
RGD
Ensembl		 PMID:12612062 PMID:21670248 PMID:27256882 PMID:31399344 GO_REF:0000033 GO_REF:0000107 NCBI chr20:3,981,259...3,987,016
Ensembl chr20:3,981,261...3,986,922 		JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 involved_in
acts_upstream_of_or_within 		ISO
IEA 		(PMID:35393539)
GO_REF:0000107
(PMID:27256882) 		RGD
Ensembl		 PMID:27256882 PMID:35393539 GO_REF:0000107 NCBI chr13:94,839,484...94,871,295
Ensembl chr13:94,839,433...94,871,567 		JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in IEA
ISS
ISO 		GO_REF:0000107
GO_REF:0000024
(PMID:31677974) 		Ensembl
UniProt
RGD		 PMID:31677974 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:210,914,576...210,918,193
Ensembl chr 1:210,914,567...210,918,193 		JBrowse link
G Ppp1r10 protein phosphatase 1, regulatory subunit 10 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:31677974) 		UniProt
Ensembl
RGD		 PMID:31677974 GO_REF:0000024 GO_REF:0000107 NCBI chr20:2,827,802...2,842,418
Ensembl chr20:2,827,802...2,842,418 		JBrowse link
G Recql5 RecQ like helicase 5 involved_in ISO
ISS 		(PMID:23748380)
GO_REF:0000024 		RGD
UniProt		 PMID:23748380 GO_REF:0000024 NCBI chr10:101,625,477...101,664,582
Ensembl chr10:101,625,480...101,664,663 		JBrowse link
G Rnf168 ring finger protein 168 involved_in ISS
ISO 		GO_REF:0000024
(PMID:20550933) 		UniProt
RGD		 PMID:20550933 GO_REF:0000024 NCBI chr11:81,991,352...82,013,306
Ensembl chr11:81,991,360...82,013,306 		JBrowse link
G Rnf8 ring finger protein 8 involved_in ISO
ISS 		(PMID:20550933)
GO_REF:0000024 		RGD
UniProt		 PMID:20550933 GO_REF:0000024 NCBI chr20:7,683,890...7,708,437 JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO
IEA 		(PMID:17284610)
GO_REF:0000107 		RGD
Ensembl		 PMID:17284610 GO_REF:0000107 NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:7,687,846...7,697,901 		JBrowse link
G Sirt6 sirtuin 6 involved_in
acts_upstream_of_or_within 		ISO
IEA 		(PMID:25247314), (PMID:31399344)
(PMID:31399344)
GO_REF:0000107 		RGD
Ensembl		 PMID:25247314 PMID:31399344 GO_REF:0000107 NCBI chr 7:8,733,056...8,738,543
Ensembl chr 7:8,732,974...8,738,542 		JBrowse link
G Supt4h1 SPT4 homolog, DSIF elongation factor subunit acts_upstream_of_or_within ISO (PMID:21670248) RGD PMID:21670248 NCBI chr10:73,036,560...73,042,821
Ensembl chr10:73,036,343...73,043,088 		JBrowse link
G Vhl von Hippel-Lindau tumor suppressor involved_in ISO (PMID:7660122) RGD PMID:7660122 NCBI chr 4:148,328,099...148,334,992
Ensembl chr 4:148,328,079...148,334,991 		JBrowse link
positive regulation of DNA-templated transcription, elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnk cyclin K involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:132,854,428...132,877,604
Ensembl chr 6:132,854,700...132,877,602 		JBrowse link
G Ccnt1 cyclin T1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:131,566,176...131,596,988
Ensembl chr 7:131,566,176...131,596,938 		JBrowse link
G Ccnt2 cyclin T2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:41,804,007...41,845,641
Ensembl chr13:41,804,046...41,844,488 		JBrowse link
G Ell3 elongation factor for RNA polymerase II 3 involved_in ISO (PMID:10882741) RGD PMID:10882741 NCBI chr 3:128,866,755...128,870,896
Ensembl chr 3:128,864,777...128,870,852 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in ISO
IEA 		(PMID:9326587)
GO_REF:0000107 		RGD
Ensembl		 PMID:9326587 GO_REF:0000107 NCBI chr16:7,771,311...7,841,895
Ensembl chr16:7,771,581...7,841,895 		JBrowse link
G Kat7 lysine acetyltransferase 7 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:31827282) 		UniProt
Ensembl
RGD		 PMID:31827282 GO_REF:0000024 GO_REF:0000107 NCBI chr10:80,718,335...80,752,387
Ensembl chr10:80,718,335...80,752,387 		JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 involved_in ISO
IEA 		(PMID:27256882)
GO_REF:0000107 		RGD
Ensembl		 PMID:27256882 GO_REF:0000107 NCBI chr13:94,839,484...94,871,295
Ensembl chr13:94,839,433...94,871,567 		JBrowse link
G Scaf8 SR-related CTD-associated factor 8 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:31104839) 		UniProt
Ensembl
RGD		 PMID:31104839 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:46,132,972...46,321,162
Ensembl chr 1:46,132,873...46,261,174 		JBrowse link
G Supt16h SPT16 homolog, facilitates chromatin remodeling subunit involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr15:27,341,196...27,378,314
Ensembl chr15:27,341,196...27,378,314 		JBrowse link
G Supt4h1 SPT4 homolog, DSIF elongation factor subunit involved_in ISO (PMID:9450929) RGD PMID:9450929 NCBI chr10:73,036,560...73,042,821
Ensembl chr10:73,036,343...73,043,088 		JBrowse link
G Supt5h SPT5 homolog, DSIF elongation factor subunit involved_in ISO
IEA 		(PMID:9450929)
GO_REF:0000107 		RGD
Ensembl		 PMID:9450929 GO_REF:0000107 NCBI chr 1:92,714,276...92,745,489
Ensembl chr 1:92,714,281...92,744,445 		JBrowse link
positive regulation of transcription elongation by RNA polymerase II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brd4 bromodomain containing 4 acts_upstream_of_or_within
involved_in 		ISO (PMID:18039861)
(PMID:19103749) 		RGD PMID:18039861 PMID:19103749 NCBI chr 7:11,866,997...11,946,575
Ensembl chr 7:11,866,997...11,946,923 		JBrowse link
G Btbd18 BTB domain containing 18 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:90,149,351...90,158,313
Ensembl chr 3:90,149,350...90,158,305 		JBrowse link
G Cbx7 chromobox 7 IMP RGD PMID:19706751 RGD:9586729 NCBI chr 7:113,341,030...113,358,716
Ensembl chr 7:113,341,030...113,358,346 		JBrowse link
G Ccnk cyclin K involved_in ISO
IEA 		(PMID:22988298), (PMID:26748711)
GO_REF:0000107 		RGD
Ensembl		 PMID:22988298 PMID:26748711 GO_REF:0000107 NCBI chr 6:132,854,428...132,877,604
Ensembl chr 6:132,854,700...132,877,602 		JBrowse link
G Ccnt1 cyclin T1 involved_in ISO
IEA 		(PMID:30134174), (PMID:35393539), (PMID:9499409)
GO_REF:0000107 		RGD
Ensembl		 PMID:9499409 PMID:30134174 PMID:35393539 GO_REF:0000107 NCBI chr 7:131,566,176...131,596,988
Ensembl chr 7:131,566,176...131,596,938 		JBrowse link
G Ccnt2 cyclin T2 involved_in ISO (PMID:9499409) RGD PMID:9499409 NCBI chr13:41,804,007...41,845,641
Ensembl chr13:41,804,046...41,844,488 		JBrowse link
G Cdc73 cell division cycle 73 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:57,897,924...58,000,031
Ensembl chr13:57,883,983...57,999,978 		JBrowse link
G Cdk12 cyclin-dependent kinase 12 involved_in ISO
IBA
IEA 		(PMID:22988298)
GO_REF:0000033
GO_REF:0000107 		RGD
GO_Central
Ensembl		 PMID:22988298 GO_REF:0000033 GO_REF:0000107 NCBI chr10:83,697,174...83,793,676
Ensembl chr10:83,767,206...83,777,183
Ensembl chr10:83,767,206...83,777,183 		JBrowse link
G Cdk13 cyclin-dependent kinase 13 involved_in ISO
IEA
IBA 		(PMID:26748711)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:26748711 GO_REF:0000033 GO_REF:0000107 NCBI chr17:51,945,975...52,040,218
Ensembl chr17:51,946,701...52,037,257 		JBrowse link
G Cdk7 cyclin-dependent kinase 7 acts_upstream_of_or_within ISO (PMID:39603239), (PMID:39603240) RGD PMID:39603239 PMID:39603240 NCBI chr 2:33,574,623...33,599,485
Ensembl chr 2:33,574,623...33,599,485 		JBrowse link
G Cdk9 cyclin-dependent kinase 9 involved_in ISS
IBA
ISO
IEA 		GO_REF:0000024
GO_REF:0000033
(PMID:14701750), (PMID:30134174), (PMID:9499409)
GO_REF:0000107 		UniProt
GO_Central
RGD
Ensembl		 PMID:9499409 PMID:14701750 PMID:30134174 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:36,394,168...36,399,016
Ensembl chr 3:36,394,169...36,399,528 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in IEA
ISO 		GO_REF:0000107
MGI:2148567|MGI:3841145 (PMID:30478225) 		Ensembl
RGD		 PMID:30478225 GO_REF:0000107 NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:129,517,545...129,544,662 		JBrowse link
G Dab2 DAB adaptor protein 2 involved_in ISO (PMID:15894542) RGD PMID:15894542 NCBI chr 2:57,241,947...57,294,893
Ensembl chr 2:57,242,064...57,294,888 		JBrowse link
G Eapp E2F-associated phosphoprotein acts_upstream_of_or_within ISO
IEA 		(PMID:15716352)
GO_REF:0000107 		RGD
Ensembl		 PMID:15716352 GO_REF:0000107 NCBI chr 6:77,879,634...77,929,653
Ensembl chr 6:77,907,485...77,928,930 		JBrowse link
G Ell elongation factor for RNA polymerase II involved_in ISO
IEA
IBA 		(PMID:23932780)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:23932780 GO_REF:0000033 GO_REF:0000107 NCBI chr16:18,877,751...18,925,449
Ensembl chr16:18,877,751...18,925,076 		JBrowse link
G Ell2 elongation factor for RNA polymerase II 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:6,910,446...6,990,654
Ensembl chr 2:6,921,771...7,016,199 		JBrowse link
G Ell2l1 elongation factor for RNA polymerase II 2 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:150,919,971...150,929,504
Ensembl chr  X:150,919,985...150,929,499 		JBrowse link
G Ell3 elongation factor for RNA polymerase II 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:128,866,755...128,870,896
Ensembl chr 3:128,864,777...128,870,852 		JBrowse link
G Eloc elongin C IDA RGD PMID:8202474 RGD:730008 NCBI chr 5:7,444,769...7,461,187
Ensembl chr 5:7,445,018...7,464,128
Ensembl chr20:7,445,018...7,464,128 		JBrowse link
G Gtf2f1 general transcription factor IIF subunit 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:1,931,033...1,940,197
Ensembl chr 9:1,930,055...1,940,197 		JBrowse link
G Ikzf1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO MGI:2158690 (PMID:21245044) RGD PMID:21245044 NCBI chr14:90,468,696...90,556,522
Ensembl chr14:90,469,172...90,557,574 		JBrowse link
G Ldb1 LIM domain binding 1 involved_in ISO
IEA 		(PMID:20570862)
GO_REF:0000107 		RGD
Ensembl		 PMID:20570862 GO_REF:0000107 NCBI chr 1:254,813,161...254,838,931
Ensembl chr 1:254,826,160...254,838,998 		JBrowse link
G Leo1 LEO1 homolog, Paf1/RNA polymerase II complex component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:85,080,036...85,104,471
Ensembl chr 8:85,079,996...85,105,094 		JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 IMP RGD PMID:18086894 RGD:2292639 NCBI chr 8:73,578,747...73,650,184
Ensembl chr 8:73,578,752...73,650,184 		JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:39603239), (PMID:39603240)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:39603239 PMID:39603240 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:210,914,576...210,918,193
Ensembl chr 1:210,914,567...210,918,193 		JBrowse link
G Ppp1r10 protein phosphatase 1, regulatory subunit 10 involved_in IEA
ISO
ISS 		GO_REF:0000107
(PMID:39603239), (PMID:39603240)
GO_REF:0000024 		Ensembl
RGD
UniProt		 PMID:39603239 PMID:39603240 GO_REF:0000024 GO_REF:0000107 NCBI chr20:2,827,802...2,842,418
Ensembl chr20:2,827,802...2,842,418 		JBrowse link
G Pwwp2a PWWP domain containing 2A involved_in ISO
IEA 		(PMID:30228260)
GO_REF:0000117
GO_REF:0000107 		RGD
UniProt
Ensembl		 PMID:30228260 GO_REF:0000107 GO_REF:0000117 NCBI chr10:28,654,272...28,696,693
Ensembl chr10:28,656,994...28,696,693 		JBrowse link
G Pwwp2b PWWP domain containing 2B involved_in ISO
IEA 		(PMID:30228260)
GO_REF:0000117
GO_REF:0000107 		RGD
UniProt
Ensembl		 PMID:30228260 GO_REF:0000107 GO_REF:0000117 NCBI chr 1:203,470,172...203,489,575
Ensembl chr 1:203,470,928...203,489,549 		JBrowse link
G Supt5h SPT5 homolog, DSIF elongation factor subunit involved_in IEA
ISO 		GO_REF:0000107
(PMID:16427012) 		Ensembl
RGD		 PMID:16427012 GO_REF:0000107 NCBI chr 1:92,714,276...92,745,489
Ensembl chr 1:92,714,281...92,744,445 		JBrowse link
G Supt6h SPT6 homolog, histone chaperone and transcription elongation factor involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr10:63,601,990...63,638,851
Ensembl chr10:63,601,993...63,638,851 		JBrowse link
G Tox4 TOX high mobility group box family member 4 involved_in IEA
ISO
ISS 		GO_REF:0000107
(PMID:39603239), (PMID:39603240)
GO_REF:0000024 		Ensembl
RGD
UniProt		 PMID:39603239 PMID:39603240 GO_REF:0000024 GO_REF:0000107 NCBI chr15:27,462,735...27,476,320
Ensembl chr15:27,462,727...27,477,617 		JBrowse link
G Wdr82 WD repeat domain 82 involved_in IEA
ISO 		GO_REF:0000107
(PMID:39603239), (PMID:39603240) 		Ensembl
RGD		 PMID:39603239 PMID:39603240 GO_REF:0000107 NCBI chr 8:115,693,297...115,713,262
Ensembl chr 8:115,693,315...115,713,242 		JBrowse link
G Zmynd8 zinc finger, MYND-type containing 8 involved_in ISO
IEA 		UniProtKB:P50750 (PMID:26655721), (PMID:30134174)
GO_REF:0000107 		RGD
Ensembl		 PMID:26655721 PMID:30134174 GO_REF:0000107 NCBI chr 3:174,948,162...175,061,382
Ensembl chr 3:174,948,537...175,061,571 		JBrowse link
regulation of DNA-templated transcription elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccar2 cell cycle and apoptosis regulator 2 involved_in ISO
IEA 		(PMID:22446626)
GO_REF:0000107 		RGD
Ensembl		 PMID:22446626 GO_REF:0000107 NCBI chr15:51,622,519...51,637,911
Ensembl chr15:51,622,464...51,637,774 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in ISO
IEA 		(PMID:9326587)
GO_REF:0000107 		RGD
Ensembl		 PMID:9326587 GO_REF:0000107 NCBI chr16:7,771,311...7,841,895
Ensembl chr16:7,771,581...7,841,895 		JBrowse link
G Setd5 SET domain containing 5 involved_in ISO
IEA 		(PMID:31515109)
GO_REF:0000107 		RGD
Ensembl		 PMID:31515109 GO_REF:0000107 NCBI chr 4:147,772,955...147,850,669
Ensembl chr 4:147,773,028...147,850,667 		JBrowse link
G Supt5h SPT5 homolog, DSIF elongation factor subunit involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:92,714,276...92,745,489
Ensembl chr 1:92,714,281...92,744,445 		JBrowse link
G Zfp326 zinc finger protein 326 involved_in ISO
IBA 		(PMID:22446626)
GO_REF:0000033 		RGD
GO_Central		 PMID:22446626 GO_REF:0000033 NCBI chr14:4,246,081...4,286,805
Ensembl chr14:4,245,878...4,331,064 		JBrowse link
regulation of transcription elongation by RNA polymerase II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eaf1 ELL associated factor 1 involved_in ISO
IEA 		(PMID:32087315)
GO_REF:0000107 		RGD
Ensembl		 PMID:32087315 GO_REF:0000107 NCBI chr16:6,704,727...6,719,476
Ensembl chr16:6,704,727...6,719,476 		JBrowse link
G Eaf2 ELL associated factor 2 involved_in ISO (PMID:32087315) RGD PMID:32087315 NCBI chr11:77,465,585...77,509,993
Ensembl chr11:77,406,020...77,509,993 		JBrowse link
G ENSRNOG00000068353 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117
G Ercc6 ERCC excision repair 6, chromatin remodeling factor IMP RGD PMID:31644904 RGD:126925983 NCBI chr16:7,771,311...7,841,895
Ensembl chr16:7,771,581...7,841,895 		JBrowse link
G Supt4h1 SPT4 homolog, DSIF elongation factor subunit involved_in ISO
IEA 		(PMID:9450929)
GO_REF:0000117 		RGD
UniProt		 PMID:9450929 GO_REF:0000117 NCBI chr10:73,036,560...73,042,821
Ensembl chr10:73,036,343...73,043,088 		JBrowse link
G Supt5h SPT5 homolog, DSIF elongation factor subunit involved_in ISO
IEA 		(PMID:9450929)
GO_REF:0000107 		RGD
Ensembl		 PMID:9450929 GO_REF:0000107 NCBI chr 1:92,714,276...92,745,489
Ensembl chr 1:92,714,281...92,744,445 		JBrowse link
G Tox4 TOX high mobility group box family member 4 involved_in IEA
ISO 		GO_REF:0000107
(PMID:35365735) 		Ensembl
RGD		 PMID:35365735 GO_REF:0000107 NCBI chr15:27,462,735...27,476,320
Ensembl chr15:27,462,727...27,477,617 		JBrowse link
G Wdr43 WD repeat domain 43 involved_in ISO
IEA 		(PMID:31128943)
GO_REF:0000107 		RGD
Ensembl		 PMID:31128943 GO_REF:0000107 NCBI chr 6:29,565,610...29,604,954
Ensembl chr 6:29,565,610...29,604,954 		JBrowse link
G Zmynd11 zinc finger, MYND-type containing 11 involved_in IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
GO_REF:0000002
(PMID:24590075) 		GO_Central
Ensembl
InterPro
RGD		 PMID:24590075 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr17:65,226,907...65,323,278
Ensembl chr17:65,234,045...65,323,276 		JBrowse link
transcription elongation by mitochondrial RNA polymerase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tefm transcription elongation factor, mitochondrial involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:65,617,547...65,622,042
Ensembl chr10:65,617,550...65,622,042 		JBrowse link
transcription elongation by RNA polymerase I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit acts_upstream_of_or_within ISO
IEA 		MGI:2183949 (PMID:23562818)
GO_REF:0000107 		RGD
Ensembl		 PMID:23562818 GO_REF:0000107 NCBI chr 1:88,161,342...88,175,102
Ensembl chr 1:88,160,988...88,175,102 		JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit acts_upstream_of_or_within ISO (PMID:23562818) RGD PMID:23562818 NCBI chr18:24,157,831...24,188,543
Ensembl chr18:24,148,084...24,190,898 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor acts_upstream_of_or_within ISO
IEA 		MGI:1932102 (PMID:23562818)
GO_REF:0000107 		RGD
Ensembl		 PMID:23562818 GO_REF:0000107 NCBI chr16:7,771,311...7,841,895
Ensembl chr16:7,771,581...7,841,895 		JBrowse link
G Gtf2h5 general transcription factor IIH subunit 5 acts_upstream_of_or_within ISO MGI:5514340 (PMID:23562818) RGD PMID:23562818 NCBI chr 1:49,061,904...49,068,612
Ensembl chr 1:49,061,959...49,070,039 		JBrowse link
G Polr1e RNA polymerase I subunit E involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:64,075,123...64,090,900
Ensembl chr 5:64,075,122...64,091,039 		JBrowse link
G Polr1f RNA polymerase I subunit F involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:55,780,706...55,797,935
Ensembl chr 6:55,780,706...55,797,935 		JBrowse link
G Polr2e RNA polymerase II, I and III subunit E involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:10,317,332...10,321,280
Ensembl chr 7:10,317,389...10,321,276 		JBrowse link
G Ubtf upstream binding transcription factor acts_upstream_of_or_within ISO (PMID:23562818) RGD PMID:23562818 NCBI chr10:87,758,346...87,775,377
Ensembl chr10:87,758,346...87,773,088 		JBrowse link
transcription elongation by RNA polymerase II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07002622.1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002
G AABR07043557.1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002
G Adrm1 ADRM1 26S proteasome ubiquitin receptor involved_in ISO
IEA 		(PMID:11818576)
GO_REF:0000107 		RGD
Ensembl		 PMID:11818576 GO_REF:0000107 NCBI chr 3:187,643,043...187,647,805
Ensembl chr 3:187,642,654...187,648,483 		JBrowse link
G Armc5 armadillo repeat containing 5 acts_upstream_of_or_within ISO (PMID:9852112) RGD PMID:9852112 NCBI chr 1:192,250,580...192,257,347
Ensembl chr 1:192,249,939...192,257,348 		JBrowse link
G Cdc73 cell division cycle 73 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000002
(PMID:20178742) 		UniProt
InterPro
RGD		 PMID:20178742 GO_REF:0000002 GO_REF:0000024 NCBI chr13:57,897,924...58,000,031
Ensembl chr13:57,883,983...57,999,978 		JBrowse link
G Cdk7 cyclin-dependent kinase 7 acts_upstream_of_or_within ISO (PMID:16427012), (PMID:9852112) RGD PMID:9852112 PMID:16427012 NCBI chr 2:33,574,623...33,599,485
Ensembl chr 2:33,574,623...33,599,485 		JBrowse link
G Cdk9 cyclin-dependent kinase 9 involved_in
acts_upstream_of_or_within 		IEA
ISO 		GO_REF:0000107
(PMID:9852112)
(PMID:14580347), (PMID:16427012) 		Ensembl
RGD		 PMID:9852112 PMID:14580347 PMID:16427012 GO_REF:0000107 NCBI chr 3:36,394,168...36,399,016
Ensembl chr 3:36,394,169...36,399,528 		JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component involved_in ISO
IEA
IBA 		(PMID:20178742)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:20178742 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:174,571,952...174,601,974
Ensembl chr 1:174,571,928...174,602,130 		JBrowse link
G Cul3 cullin 3 acts_upstream_of_or_within ISO (PMID:9852112) RGD PMID:9852112 NCBI chr 9:89,040,987...89,118,775
Ensembl chr 9:89,040,987...89,118,427 		JBrowse link
G Eaf1 ELL associated factor 1 involved_in IBA
IEA 		GO_REF:0000033
GO_REF:0000002 		GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr16:6,704,727...6,719,476
Ensembl chr16:6,704,727...6,719,476 		JBrowse link
G Eaf2 ELL associated factor 2 involved_in IBA
IEA 		GO_REF:0000033
GO_REF:0000002 		GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr11:77,465,585...77,509,993
Ensembl chr11:77,406,020...77,509,993 		JBrowse link
G Ell elongation factor for RNA polymerase II involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr16:18,877,751...18,925,449
Ensembl chr16:18,877,751...18,925,076 		JBrowse link
G Ell2 elongation factor for RNA polymerase II 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:6,910,446...6,990,654
Ensembl chr 2:6,921,771...7,016,199 		JBrowse link
G Ell2l1 elongation factor for RNA polymerase II 2 like 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:150,919,971...150,929,504
Ensembl chr  X:150,919,985...150,929,499 		JBrowse link
G Ell3 elongation factor for RNA polymerase II 3 involved_in ISO
IEA 		(PMID:10882741)
GO_REF:0000002 		RGD
InterPro		 PMID:10882741 GO_REF:0000002 NCBI chr 3:128,866,755...128,870,896
Ensembl chr 3:128,864,777...128,870,852 		JBrowse link
G Eloa elongin A involved_in IDA
IEA 		PMID:8896449
GO_REF:0000002 		InterPro PMID:8896449 GO_REF:0000002, RGD:8553414 NCBI chr 5:153,513,246...153,530,819
Ensembl chr 5:153,515,066...153,530,916 		JBrowse link
G Elob elongin B involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:13,353,413...13,358,484
Ensembl chr10:13,353,417...13,358,563 		JBrowse link
G Elob-ps13 elongin B, pseudogene 13 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:41,431,630...41,432,092 JBrowse link
G Elob-ps14 elongin B, pseudogene 14 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:41,385,881...41,386,571 JBrowse link
G Elob-ps15 elongin B, pseudogene 15 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:41,435,127...41,435,966 JBrowse link
G Elob-ps3 elongin B, pseudogene 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:41,408,348...41,409,231 JBrowse link
G Elob-ps4 elongin B, pseudogene 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:74,247,082...74,247,436
Ensembl chr10:74,229,663...74,247,606 		JBrowse link
G Elob-ps5 elongin B, pseudogene 5 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:41,439,065...41,439,946 JBrowse link
G Elob-ps7 elongin B, pseudogene 7 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:41,380,721...41,384,116 JBrowse link
G Elob-ps8 elongin B, pseudogene 8 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:41,423,236...41,424,174 JBrowse link
G Elobl7 elongin B like 7 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:119,873,558...119,874,018
Ensembl chr 8:119,868,335...119,874,233 		JBrowse link
G Elobl9 elongin B like 9 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:74,262,854...74,263,183
Ensembl chr10:74,261,337...74,263,309 		JBrowse link
G Elof1 elongation factor 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:28,921,338...28,926,612
Ensembl chr 8:28,921,339...28,926,228 		JBrowse link
G ENSRNOG00000063973 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002
G ENSRNOG00000064158 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002
G ENSRNOG00000065620 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002
G ENSRNOG00000066103 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002
G ENSRNOG00000066836 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002
G ENSRNOG00000067613 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117
G ENSRNOG00000068353 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G ENSRNOG00000068416 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002
G ENSRNOG00000069411 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002
G ENSRNOG00000070656 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002
G ENSRNOG00000071067 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002
G Eny2 ENY2, transcription and export complex 2 subunit involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 7:77,465,885...77,489,637
Ensembl chr 7:77,466,119...77,491,057 		JBrowse link
G Gtf2f1 general transcription factor IIF subunit 1 involved_in ISO
IEA 		(PMID:15351637)
GO_REF:0000107 		RGD
Ensembl		 PMID:15351637 GO_REF:0000107 NCBI chr 9:1,931,033...1,940,197
Ensembl chr 9:1,930,055...1,940,197 		JBrowse link
G Gtf2f2 general transcription factor IIF subunit 2 involved_in IDA
IEA
ISO 		GO_REF:0000117
(PMID:15351637) 		UniProt
RGD		 PMID:15351637 PMID:7929273 GO_REF:0000117, RGD:9681417 NCBI chr15:57,615,361...57,736,477
Ensembl chr15:57,614,841...57,736,516 		JBrowse link
G Ints11 integrator complex subunit 11 acts_upstream_of_or_within ISO (PMID:9852112) RGD PMID:9852112 NCBI chr 5:171,761,370...171,779,883
Ensembl chr 5:171,761,371...171,779,883 		JBrowse link
G Ints6 integrator complex subunit 6 acts_upstream_of_or_within ISO (PMID:9852112) RGD PMID:9852112 NCBI chr15:41,080,584...41,224,350
Ensembl chr15:41,109,125...41,197,519 		JBrowse link
G Leo1 LEO1 homolog, Paf1/RNA polymerase II complex component involved_in ISO
IEA
ISS 		(PMID:20178742)
GO_REF:0000002
GO_REF:0000024 		RGD
InterPro
UniProt		 PMID:20178742 GO_REF:0000002 GO_REF:0000024 NCBI chr 8:85,080,036...85,104,471
Ensembl chr 8:85,079,996...85,105,094 		JBrowse link
G LOC134479390 uncharacterized LOC134479390 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:81,805,637...81,812,349 JBrowse link
G LOC134480734 elongin-B-like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:74,240,680...74,241,020
Ensembl chr10:74,240,740...74,241,036 		JBrowse link
G LOC134483601 DNA-directed RNA polymerase II subunit GRINL1A-like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr19:29,150,586...29,151,953 JBrowse link
G LOC134486081 elongin-B-like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:41,412,775...41,413,212 JBrowse link
G LOC134486082 elongin-B-like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:41,397,679...41,398,266 JBrowse link
G LOC134486083 elongin-B-like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:41,388,339...41,393,231 JBrowse link
G LOC134486084 elongin-B-like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:41,427,283...41,428,132 JBrowse link
G LOC134486085 elongin-B-like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:41,393,317...41,394,459 JBrowse link
G Myzap myocardial zonula adherens protein involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:81,036,599...81,123,933
Ensembl chr 8:81,036,601...81,123,810 		JBrowse link
G Paf1 PAF1 homolog, Paf1/RNA polymerase II complex component involved_in ISO
IEA
ISS 		(PMID:20178742)
GO_REF:0000002
GO_REF:0000107
GO_REF:0000024 		RGD
InterPro
Ensembl
UniProt		 PMID:20178742 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:92,811,197...92,816,775
Ensembl chr 1:92,798,237...92,816,779 		JBrowse link
G Pbrm1 polybromo 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:6,219,933...6,319,336
Ensembl chr16:6,219,917...6,319,336 		JBrowse link
G Pcid2 PCI domain containing 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:83,125,386...83,150,851
Ensembl chr16:83,124,658...83,156,970 		JBrowse link
G Polr2a RNA polymerase II subunit A involved_in ISO (PMID:9852112) RGD PMID:9852112 NCBI chr10:54,951,162...54,977,179
Ensembl chr10:54,951,162...54,977,179 		JBrowse link
G Polr2m RNA polymerase II subunit M involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:81,012,770...81,020,201
Ensembl chr 8:81,012,771...81,020,302 		JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha acts_upstream_of_or_within ISO (PMID:16427012), (PMID:9852112) RGD PMID:9852112 PMID:16427012 NCBI chr 1:210,914,576...210,918,193
Ensembl chr 1:210,914,567...210,918,193 		JBrowse link
G Ppp1r10 protein phosphatase 1, regulatory subunit 10 acts_upstream_of_or_within ISO (PMID:16427012), (PMID:9852112) RGD PMID:9852112 PMID:16427012 NCBI chr20:2,827,802...2,842,418
Ensembl chr20:2,827,802...2,842,418 		JBrowse link
G Ppp2ca protein phosphatase 2 catalytic subunit alpha acts_upstream_of_or_within ISO (PMID:9852112) RGD PMID:9852112 NCBI chr10:36,856,534...36,878,789 JBrowse link
G Ppp2r1a protein phosphatase 2 scaffold subunit A alpha acts_upstream_of_or_within ISO (PMID:9852112) RGD PMID:9852112 NCBI chr 1:69,213,198...69,232,441
Ensembl chr 1:69,213,038...69,238,242 		JBrowse link
G Rbx1 ring-box 1 acts_upstream_of_or_within ISO (PMID:9852112) RGD PMID:9852112 NCBI chr 7:114,870,893...114,881,194
Ensembl chr 7:114,870,972...114,881,191 		JBrowse link
G Rtf1 Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) involved_in ISO
IEA 		(PMID:20178742)
GO_REF:0000107 		RGD
Ensembl		 PMID:20178742 GO_REF:0000107 NCBI chr 3:127,113,171...127,172,761
Ensembl chr 3:127,113,163...127,172,761 		JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase involved_in ISO
IEA 		(PMID:23325844)
GO_REF:0000107 		RGD
Ensembl		 PMID:23325844 GO_REF:0000107 NCBI chr 8:119,390,207...119,475,863
Ensembl chr 8:119,390,207...119,475,863 		JBrowse link
G Skic8 SKI8 subunit of superkiller complex involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:20178742) 		UniProt
Ensembl
RGD		 PMID:20178742 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:63,999,669...64,016,959
Ensembl chr 8:63,999,671...64,016,846 		JBrowse link
G Sox10 SRY-box transcription factor 10 IDA RGD PMID:25524031 RGD:12879827 NCBI chr 7:112,605,721...112,615,097
Ensembl chr 7:112,605,721...112,615,990 		JBrowse link
G Supt16h SPT16 homolog, facilitates chromatin remodeling subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:27,341,196...27,378,314
Ensembl chr15:27,341,196...27,378,314 		JBrowse link
G Supt4h1 SPT4 homolog, DSIF elongation factor subunit involved_in ISO
IBA 		(PMID:9450929), (PMID:9857195)
GO_REF:0000033 		RGD
GO_Central		 PMID:9450929 PMID:9857195 GO_REF:0000033 NCBI chr10:73,036,560...73,042,821
Ensembl chr10:73,036,343...73,043,088 		JBrowse link
G Supt5h SPT5 homolog, DSIF elongation factor subunit involved_in ISO
IEA
IBA 		(PMID:10075709), (PMID:9450929)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:9450929 PMID:10075709 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:92,714,276...92,745,489
Ensembl chr 1:92,714,281...92,744,445 		JBrowse link
G Supt6h SPT6 homolog, histone chaperone and transcription elongation factor involved_in IEA
ISO
IBA 		GO_REF:0000107
(PMID:17234882)
GO_REF:0000033 		Ensembl
RGD
GO_Central		 PMID:17234882 GO_REF:0000033 GO_REF:0000107 NCBI chr10:63,601,990...63,638,851
Ensembl chr10:63,601,993...63,638,851 		JBrowse link
G Tcea1 transcription elongation factor A1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:19,414,351...19,466,629
Ensembl chr15:12,831,339...12,834,156
Ensembl chr 5:12,831,339...12,834,156 		JBrowse link
G Tcea2 transcription elongation factor A2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:189,173,756...189,181,633
Ensembl chr 3:189,165,603...189,182,540 		JBrowse link
G Tcea3 transcription elongation factor A3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:153,760,401...153,792,934
Ensembl chr 5:153,760,407...153,792,930 		JBrowse link
transcription elongation-coupled chromatin remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk9 cyclin-dependent kinase 9 involved_in ISO
IEA 		(PMID:19844166)
GO_REF:0000107 		RGD
Ensembl		 PMID:19844166 GO_REF:0000107 NCBI chr 3:36,394,168...36,399,016
Ensembl chr 3:36,394,169...36,399,528 		JBrowse link
G ENSRNOG00000068353 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002
G ENSRNOG00000069559 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002
G Epop elongin BC and polycomb repressive complex 2 associated protein involved_in ISO
IEA 		(PMID:27863226)
GO_REF:0000107 		RGD
Ensembl		 PMID:27863226 GO_REF:0000107 NCBI chr10:83,120,767...83,122,287
Ensembl chr10:83,119,970...83,122,423 		JBrowse link
G Glyr1 glyoxylate reductase 1 homolog involved_in ISO
IEA
IBA 		(PMID:29759984)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:29759984 GO_REF:0000033 GO_REF:0000107 NCBI chr10:11,038,577...11,074,093
Ensembl chr10:11,038,568...11,074,090 		JBrowse link
G Iws1 interacts with SUPT6H, CTD assembly factor 1 involved_in ISO
IEA 		(PMID:19141475)
GO_REF:0000107 		RGD
Ensembl		 PMID:19141475 GO_REF:0000107 NCBI chr18:23,969,352...24,011,560
Ensembl chr18:23,969,733...24,010,415 		JBrowse link
G Sart3 spliceosome associated factor 3, U4/U6 recycling protein involved_in ISO
IEA 		(PMID:24526689)
GO_REF:0000107 		RGD
Ensembl		 PMID:24526689 GO_REF:0000107 NCBI chr12:48,519,579...48,547,584
Ensembl chr12:48,519,849...48,547,583 		JBrowse link
G Supt4h1 SPT4 homolog, DSIF elongation factor subunit involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:73,036,560...73,042,821
Ensembl chr10:73,036,343...73,043,088 		JBrowse link
G Supt6h SPT6 homolog, histone chaperone and transcription elongation factor involved_in ISO
IEA 		(PMID:23503590)
GO_REF:0000002
GO_REF:0000107
GO_REF:0000117 		RGD
InterPro
Ensembl
UniProt		 PMID:23503590 GO_REF:0000002 GO_REF:0000107 GO_REF:0000117 NCBI chr10:63,601,990...63,638,851
Ensembl chr10:63,601,993...63,638,851 		JBrowse link
G Usp15 ubiquitin specific peptidase 15 involved_in ISO
ISS
IEA
IBA 		(PMID:24526689)
GO_REF:0000024
GO_REF:0000107
GO_REF:0000033 		RGD
UniProt
Ensembl
GO_Central		 PMID:24526689 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:60,643,611...60,805,137
Ensembl chr 7:60,643,613...60,734,099 		JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in ISO (PMID:27863226) RGD PMID:27863226 NCBI chr10:7,335,508...7,432,018
Ensembl chr10:7,367,604...7,432,013 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20668
    cellular process 19605
      metabolic process 12252
        biosynthetic process 8769
          macromolecule biosynthetic process 7730
            nucleic acid biosynthetic process 4563
              RNA biosynthetic process 4442
                DNA-templated transcription elongation 135
                  maintenance of transcriptional fidelity during transcription elongation + 1
                  negative regulation of DNA-templated transcription, elongation + 24
                  positive regulation of DNA-templated transcription, elongation + 39
                  regulation of DNA-templated transcription elongation + 62
                  transcription elongation by RNA polymerase I + 8
                  transcription elongation by RNA polymerase II + 121
                  transcription elongation by RNA polymerase III + 0
                  transcription elongation by mitochondrial RNA polymerase 1
Path 2
Term Annotations click to browse term
  biological_process 20668
    cellular process 19605
      metabolic process 12252
        primary metabolic process 10845
          nucleobase-containing compound metabolic process 5964
            nucleic acid metabolic process 5331
              RNA metabolic process 4729
                RNA biosynthetic process 4442
                  DNA-templated transcription 3575
                    DNA-templated transcription elongation 135
                      maintenance of transcriptional fidelity during transcription elongation + 1
                      negative regulation of DNA-templated transcription, elongation + 24
                      positive regulation of DNA-templated transcription, elongation + 39
                      regulation of DNA-templated transcription elongation + 62
                      transcription elongation by RNA polymerase I + 8
                      transcription elongation by RNA polymerase II + 121
                      transcription elongation by RNA polymerase III + 0
                      transcription elongation by mitochondrial RNA polymerase 1
paths to the root