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ONTOLOGY REPORT - ANNOTATIONS


Term:cytochrome complex assembly
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Accession:GO:0017004 term browser browse the term
Definition:The aggregation, arrangement and bonding together of a cytochrome complex. A cytochrome complex is a protein complex in which at least one of the proteins is a cytochrome, i.e. a heme-containing protein involved in catalysis of redox reactions.
Synonyms:broad_synonym: cytochrome biogenesis


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cytochrome complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cox10 cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10 acts_upstream_of_or_within ISO (MGI:3604933|PMID:16103131) RGD PMID:16103131 MGI:3604933 NCBI chr10:48,630,993...48,742,835
Ensembl chr10:48,630,676...48,746,667
JBrowse link
G Cyba cytochrome b-245 alpha chain involved_in ISO (PMID:7938008) RGD PMID:7938008 NCBI chr19:50,487,598...50,495,669
Ensembl chr19:50,487,597...50,495,721
JBrowse link
cytochrome c-heme linkage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hccs holocytochrome c synthase involved_in IBA
ISO
PMID:21873635
(PMID:23150584)
RGD PMID:23150584 PMID:21873635 RGD:13792537 NCBI chr  X:24,932,943...24,942,376
Ensembl chr  X:24,933,002...24,942,366
JBrowse link
mitochondrial cytochrome c oxidase assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcs1l BCS1 homolog, ubiquinol-cytochrome c reductase complex chaperone involved_in ISO (PMID:18628306) RGD PMID:18628306 NCBI chr 9:76,164,925...76,168,940
Ensembl chr 9:76,164,932...76,168,938
JBrowse link
G Coa3 cytochrome C oxidase assembly factor 3 involved_in ISO
IBA
(PMID:23260140)
PMID:21873635
RGD PMID:23260140 PMID:21873635 RGD:13792537 NCBI chr10:86,220,192...86,221,173
Ensembl chr10:86,220,194...86,221,178
JBrowse link
G Coa4 cytochrome c oxidase assembly factor 4 homolog involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:154,882,199...154,885,445
Ensembl chr 1:154,882,155...154,888,174
JBrowse link
G Coa5 cytochrome C oxidase assembly factor 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:39,651,459...39,664,870 JBrowse link
G Coa8 cytochrome c oxidase assembly factor 8 involved_in ISO
ISS
(PMID:25175347), (PMID:30552096)
(MGI:6355662|PMID:30552096)
GO_REF:0000024
RGD
UniProt
PMID:25175347 PMID:30552096 GO_REF:0000024 MGI:6355662 NCBI chr 6:130,772,218...130,797,081
Ensembl chr 6:130,771,199...130,797,081
JBrowse link
G Cox14 cytochrome c oxidase assembly factor COX14 involved_in ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:22243966)
UniProt
RGD
PMID:22243966 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 7:130,852,226...130,854,316 JBrowse link
G Cox16 cytochrome c oxidase assembly factor COX16 involved_in IBA
ISO
PMID:21873635
(PMID:29355485), (PMID:29381136)
RGD PMID:29355485 PMID:29381136 PMID:21873635 RGD:13792537 NCBI chr 6:101,162,231...101,181,277
Ensembl chr 6:101,019,680...101,181,246
JBrowse link
G Cox17 cytochrome c oxidase copper chaperone COX17 involved_in IBA
ISO
PMID:21873635
(PMID:19393246)
RGD PMID:19393246 PMID:21873635 RGD:13792537 NCBI chr11:62,400,733...62,406,507 JBrowse link
G Cox18 cytochrome c oxidase assembly factor COX18 involved_in ISO
IBA
(PMID:28330871)
PMID:21873635
RGD PMID:28330871 PMID:21873635 RGD:13792537 NCBI chr14:17,864,581...17,877,483
Ensembl chr14:17,865,857...17,877,480
JBrowse link
G Cox19 cytochrome c oxidase assembly factor COX19 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:15,303,535...15,313,014
Ensembl chr12:15,303,551...15,313,014
JBrowse link
G Cox20 cytochrome c oxidase assembly factor COX20 involved_in IBA
ISO
PMID:21873635
(PMID:23125284), (PMID:24403053)
RGD PMID:23125284 PMID:24403053 PMID:21873635 RGD:13792537 NCBI chr13:90,065,900...90,075,386 JBrowse link
G Fastkd3 FAST kinase domains 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:27789713)
UniProt
RGD
PMID:27789713 GO_REF:0000024 NCBI chr 1:34,858,342...34,866,988
Ensembl chr 1:34,858,219...34,866,973
JBrowse link
G Oxa1l OXA1L, mitochondrial inner membrane protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:27,813,688...27,821,319
Ensembl chr15:27,813,625...27,821,319
JBrowse link
G Pet100 PET100 cytochrome c oxidase chaperone involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:1,679,805...1,682,540
Ensembl chr12:1,679,859...1,682,540
JBrowse link
G Sco1 synthesis of cytochrome C oxidase 1 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:15229189)
MGI:2176228|MGI:5758867 (MGI:5643882|PMID:25683716)
PMID:21873635
RGD PMID:15229189 PMID:25683716 PMID:21873635 MGI:5643882, RGD:13792537 NCBI chr10:51,744,656...51,757,246
Ensembl chr10:51,744,656...51,757,237
JBrowse link
G Smim20 small integral membrane protein 20 involved_in ISO (PMID:26321642) RGD PMID:26321642 NCBI chr14:57,711,304...57,722,681 JBrowse link
G Surf1 SURF1, cytochrome c oxidase assembly factor involved_in ISS
ISO
GO_REF:0000024
(PMID:24027061)
UniProt
RGD
PMID:24027061 GO_REF:0000024 NCBI chr 3:10,241,793...10,244,686
Ensembl chr 3:10,241,837...10,263,315
JBrowse link
G Taco1 translational activator of cytochrome c oxidase I involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5905291 (MGI:5881987|PMID:27319982)
Ensembl
RGD
PMID:27319982 GO_REF:0000107 MGI:5881987 NCBI chr10:91,002,590...91,010,494
Ensembl chr10:91,002,640...91,012,042
JBrowse link
G Timm21 translocase of inner mitochondrial membrane 21 involved_in ISS
ISO
GO_REF:0000024
(PMID:23260140)
UniProt
RGD
PMID:23260140 GO_REF:0000024 NCBI chr18:78,314,900...78,319,362
Ensembl chr18:78,314,909...78,319,454
JBrowse link
mitochondrial respiratory chain complex III assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcs1l BCS1 homolog, ubiquinol-cytochrome c reductase complex chaperone involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:5446796 (MGI:5446800|PMID:21274865)
(PMID:18628306)
RGD PMID:18628306 PMID:21274865 PMID:21873635 MGI:5446800, RGD:13792537 NCBI chr 9:76,164,925...76,168,940
Ensembl chr 9:76,164,932...76,168,938
JBrowse link
G LOC686324 similar to Protein UNQ655/PRO1286 homolog precursor involved_in IBA
ISS
PMID:21873635
GO_REF:0000024
UniProt PMID:21873635 GO_REF:0000024, RGD:13792537
G LOC691921 hypothetical protein LOC691921 involved_in ISO
IBA
(PMID:32161263)
(MGI:6401640|PMID:32161263)
PMID:21873635
RGD PMID:32161263 PMID:21873635 MGI:6401640, RGD:13792537 NCBI chr 7:21,104,729...21,108,135
Ensembl chr 7:21,105,042...21,108,135
JBrowse link
G Lyrm7 LYR motif containing 7 involved_in ISO (PMID:23168492) RGD PMID:23168492 NCBI chr10:38,964,299...38,983,628
Ensembl chr10:38,964,311...38,983,601
JBrowse link
G RGD1561671 similar to RIKEN cDNA 2900010M23 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:11,936,026...11,936,668
Ensembl chr17:11,936,099...11,936,668
JBrowse link
G Slc25a33 solute carrier family 25 member 33 involved_in ISO (PMID:20453889) RGD PMID:20453889 NCBI chr 5:160,195,040...160,219,961
Ensembl chr 5:160,195,042...160,219,961
JBrowse link
G Ttc19 tetratricopeptide repeat domain 19 involved_in ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:21278747)
UniProt
RGD
PMID:21278747 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:46,969,727...46,997,789
Ensembl chr10:46,969,727...46,997,789
JBrowse link
G Uqcc1 ubiquinol-cytochrome c reductase complex assembly factor 1 involved_in ISO
IBA
(PMID:24385928)
PMID:21873635
RGD PMID:24385928 PMID:21873635 RGD:13792537 NCBI chr 3:144,353,276...144,445,810
Ensembl chr 3:144,353,287...144,445,711
JBrowse link
G Uqcc2 ubiquinol-cytochrome c reductase complex assembly factor 2 involved_in ISO
IBA
ISS
(PMID:24385928)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:24385928 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr20:5,202,837...5,214,541
Ensembl chr20:5,202,837...5,214,164
JBrowse link
G Uqcc3 ubiquinol-cytochrome c reductase complex assembly factor 3 involved_in IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(PMID:25605331)
UniProt
RGD
PMID:25605331 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:205,773,591...205,774,369
Ensembl chr 1:205,772,780...205,774,376
JBrowse link
G Uqcrfs1 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 involved_in ISO (PMID:31883641) RGD PMID:31883641 NCBI chr17:33,977,908...33,982,478
Ensembl chr17:33,977,921...33,982,479
JBrowse link
respiratory chain complex IV assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Coa6 cytochrome c oxidase assembly factor 6 involved_in ISO (PMID:24549041), (PMID:25959673), (PMID:26160915) RGD PMID:24549041 PMID:25959673 PMID:26160915 NCBI chr19:54,395,682...54,398,918 JBrowse link
G Cox10 cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10 involved_in ISO (PMID:14607829) RGD PMID:14607829 NCBI chr10:48,630,993...48,742,835
Ensembl chr10:48,630,676...48,746,667
JBrowse link
G Cox15 cytochrome c oxidase assembly homolog COX15 involved_in ISO (PMID:12474143) RGD PMID:12474143 NCBI chr 1:242,605,588...242,622,279
Ensembl chr 1:242,605,588...242,622,261
JBrowse link
G Cox18 cytochrome c oxidase assembly factor COX18 involved_in ISO UniProtKB:P53239 (PMID:16911509) RGD PMID:16911509 NCBI chr14:17,864,581...17,877,483
Ensembl chr14:17,865,857...17,877,480
JBrowse link
G Mt-co3 mitochondrially encoded cytochrome c oxidase III involved_in ISS
ISO
GO_REF:0000024
(PMID:8630495)
UniProt
RGD
PMID:8630495 GO_REF:0000024 Ensembl chr MT:8,599...9,382 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    cellular process 18340
      cellular component organization or biogenesis 6481
        cellular component organization 6235
          cellular component assembly 2970
            protein-containing complex assembly 1595
              cellular protein-containing complex assembly 1113
                cytochrome complex assembly 35
                  cytochrome P450 4A1-heme linkage 0
                  cytochrome b6f complex assembly 0
                  cytochrome c-heme linkage + 1
                  peroxidase-heme linkage + 0
                  protein-heme P460 linkage + 0
                  protein-heme linkage via 1'-L-histidine 0
                  respiratory chain complex III assembly + 11
                  respiratory chain complex IV assembly + 23
paths to the root