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ONTOLOGY REPORT - ANNOTATIONS

Term:cytochrome complex assembly
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Accession:GO:0017004 term browser browse the term
Definition:The aggregation, arrangement and bonding together of a cytochrome complex. A cytochrome complex is a protein complex in which at least one of the proteins is a cytochrome, i.e. a heme-containing protein involved in catalysis of redox reactions.
Synonyms:broad_synonym: cytochrome biogenesis


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cytochrome complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cox10 cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10 acts_upstream_of_or_within ISO (MGI:3604933|PMID:16103131) RGD PMID:16103131 MGI:3604933 NCBI chr10:48,630,993...48,742,835
Ensembl chr10:48,630,676...48,746,667 		JBrowse link
G Cyba cytochrome b-245 alpha chain involved_in ISO (PMID:7938008) RGD PMID:7938008 NCBI chr19:50,487,598...50,495,669
Ensembl chr19:50,487,597...50,495,721 		JBrowse link
cytochrome c-heme linkage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hccs holocytochrome c synthase involved_in ISO
IBA		 (PMID:23150584)
PMID:21873635		 RGD PMID:23150584 PMID:21873635 RGD:13792537 NCBI chr  X:24,932,943...24,942,376
Ensembl chr  X:24,933,002...24,942,366 		JBrowse link
mitochondrial cytochrome c oxidase assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07015507.1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002
G Bcs1l BCS1 homolog, ubiquinol-cytochrome c reductase complex chaperone involved_in ISO (PMID:18628306) RGD PMID:18628306 NCBI chr 9:76,164,925...76,168,940
Ensembl chr 9:76,164,932...76,168,938 		JBrowse link
G Coa3 cytochrome C oxidase assembly factor 3 involved_in ISO
IBA		 (PMID:23260140)
PMID:21873635		 RGD PMID:23260140 PMID:21873635 RGD:13792537 NCBI chr10:86,220,192...86,221,173
Ensembl chr10:86,220,194...86,221,178 		JBrowse link
G Coa4 cytochrome c oxidase assembly factor 4 homolog involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:154,882,199...154,885,445
Ensembl chr 1:154,882,155...154,888,174 		JBrowse link
G Coa8 cytochrome c oxidase assembly factor 8 involved_in ISO
ISS		 (PMID:25175347), (PMID:30552096)
(MGI:6355662|PMID:30552096)
GO_REF:0000024		 RGD
UniProt		 PMID:25175347 PMID:30552096 GO_REF:0000024 MGI:6355662 NCBI chr 6:130,772,218...130,797,081
Ensembl chr 6:130,771,199...130,797,081 		JBrowse link
G Cox14 cytochrome c oxidase assembly factor COX14 involved_in ISS
IBA
ISO		 GO_REF:0000024
PMID:21873635
(PMID:22243966)		 UniProt
RGD		 PMID:22243966 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 7:130,852,226...130,854,316 JBrowse link
G Cox16 cytochrome c oxidase assembly factor COX16 involved_in IBA
ISO		 PMID:21873635
(PMID:29355485), (PMID:29381136)		 RGD PMID:29355485 PMID:29381136 PMID:21873635 RGD:13792537 NCBI chr 6:101,162,231...101,181,277
Ensembl chr 6:101,019,680...101,181,246 		JBrowse link
G Cox17 cytochrome c oxidase copper chaperone COX17 involved_in ISO (PMID:19393246) RGD PMID:19393246 NCBI chr11:62,400,733...62,406,507 JBrowse link
G Cox18 cytochrome c oxidase assembly factor COX18 involved_in ISO
IBA		 (PMID:28330871)
PMID:21873635		 RGD PMID:28330871 PMID:21873635 RGD:13792537 NCBI chr14:17,864,581...17,877,483
Ensembl chr14:17,865,857...17,877,480 		JBrowse link
G Cox19 cytochrome c oxidase assembly factor COX19 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:15,303,535...15,313,014
Ensembl chr12:15,303,551...15,313,014 		JBrowse link
G Cox20 cytochrome c oxidase assembly factor COX20 involved_in ISO (PMID:23125284), (PMID:24403053) RGD PMID:23125284 PMID:24403053 NCBI chr13:90,065,900...90,075,386 JBrowse link
G ENSRNOG00000070717 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 5:148,223,650...148,224,105 JBrowse link
G Fastkd3 FAST kinase domains 3 involved_in ISS
ISO		 GO_REF:0000024
(PMID:27789713)		 UniProt
RGD		 PMID:27789713 GO_REF:0000024 NCBI chr 1:34,858,342...34,866,988
Ensembl chr 1:34,858,219...34,866,973 		JBrowse link
G LOC120096563 cytochrome c oxidase assembly protein COX20, mitochondrial-like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:6,567,733...6,568,059
Ensembl chr14:6,567,733...6,568,056 		JBrowse link
G Pet100 PET100 cytochrome c oxidase chaperone involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:1,679,805...1,682,540
Ensembl chr12:1,679,859...1,682,540 		JBrowse link
G Sco1 synthesis of cytochrome C oxidase 1 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:15229189)
MGI:2176228|MGI:5758867 (MGI:5643882|PMID:25683716)
PMID:21873635		 RGD PMID:15229189 PMID:25683716 PMID:21873635 MGI:5643882, RGD:13792537 NCBI chr10:51,744,656...51,757,246
Ensembl chr10:51,744,656...51,757,237 		JBrowse link
G Smim20 small integral membrane protein 20 involved_in ISO
IBA
IEA		 (PMID:26321642)
PMID:21873635
GO_REF:0000002		 RGD
InterPro		 PMID:26321642 PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr14:57,711,304...57,722,681
Ensembl chr14:57,711,307...57,722,681 		JBrowse link
G Stmp1 short transmembrane mitochondrial protein 1 involved_in ISO (PMID:35450818) RGD PMID:35450818 NCBI chr 4:63,927,523...63,937,355 JBrowse link
G Surf1 SURF1, cytochrome c oxidase assembly factor involved_in ISS
ISO		 GO_REF:0000024
(PMID:24027061)		 UniProt
RGD		 PMID:24027061 GO_REF:0000024 NCBI chr 3:10,241,793...10,244,686
Ensembl chr 3:10,241,837...10,263,315 		JBrowse link
G Taco1 translational activator of cytochrome c oxidase I involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:5905291 (MGI:5881987|PMID:27319982)		 Ensembl
RGD		 PMID:27319982 GO_REF:0000107 MGI:5881987 NCBI chr10:91,002,590...91,010,494
Ensembl chr10:91,002,640...91,012,042 		JBrowse link
G Timm21 translocase of inner mitochondrial membrane 21 involved_in ISS
ISO		 GO_REF:0000024
(PMID:23260140)		 UniProt
RGD		 PMID:23260140 GO_REF:0000024 NCBI chr18:78,314,900...78,319,362
Ensembl chr18:78,314,909...78,319,454 		JBrowse link
G Tmem223 transmembrane protein 223 involved_in ISO (PMID:34969438) RGD PMID:34969438 NCBI chr 1:205,668,716...205,670,077
Ensembl chr 1:205,662,063...205,670,056 		JBrowse link
G Uqcc5 ubiquinol-cytochrome c reductase complex assembly factor 5 involved_in ISO (PMID:34969438) RGD PMID:34969438 NCBI chr16:6,316,629...6,320,509
Ensembl chr16:6,286,300...6,320,642 		JBrowse link
G Uqcc6 ubiquinol-cytochrome c reductase complex assembly factor 6 involved_in ISO (PMID:34969438) RGD PMID:34969438 NCBI chr 7:21,104,729...21,108,135
Ensembl chr 7:21,105,042...21,108,135 		JBrowse link
mitochondrial respiratory chain complex III assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcs1l BCS1 homolog, ubiquinol-cytochrome c reductase complex chaperone involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:18628306)
PMID:21873635
MGI:5446796 (MGI:5446800|PMID:21274865)		 RGD PMID:18628306 PMID:21274865 PMID:21873635 MGI:5446800, RGD:13792537 NCBI chr 9:76,164,925...76,168,940
Ensembl chr 9:76,164,932...76,168,938 		JBrowse link
G ENSRNOG00000062467 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr19:13,663,574...13,664,092 JBrowse link
G LOC120093241 ubiquinol-cytochrome-c reductase complex assembly factor 3-like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:41,725,311...41,725,677
Ensembl chr 6:41,725,311...41,725,580 		JBrowse link
G LOC686324 similar to Protein UNQ655/PRO1286 homolog precursor involved_in IBA
ISS		 PMID:21873635
GO_REF:0000024		 UniProt PMID:21873635 GO_REF:0000024, RGD:13792537
G Lyrm7 LYR motif containing 7 involved_in ISO
IEA
IBA		 (PMID:23168492)
GO_REF:0000002
PMID:21873635		 RGD
InterPro		 PMID:23168492 PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr10:38,964,299...38,983,628
Ensembl chr10:38,964,311...38,983,601 		JBrowse link
G Slc25a33 solute carrier family 25 member 33 involved_in ISO (PMID:20453889) RGD PMID:20453889 NCBI chr 5:160,195,040...160,219,961
Ensembl chr 5:160,195,042...160,219,961 		JBrowse link
G Stmp1 short transmembrane mitochondrial protein 1 involved_in ISO (MGI:6877035|PMID:35101990) RGD PMID:35101990 MGI:6877035 NCBI chr 4:63,927,523...63,937,355 JBrowse link
G Ttc19 tetratricopeptide repeat domain 19 involved_in ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000002
PMID:21873635
(PMID:21278747)		 UniProt
InterPro
RGD		 PMID:21278747 PMID:21873635 GO_REF:0000002 GO_REF:0000024, RGD:13792537 NCBI chr10:46,969,727...46,997,789
Ensembl chr10:46,969,727...46,997,789 		JBrowse link
G Uqcc1 ubiquinol-cytochrome c reductase complex assembly factor 1 involved_in ISO
IBA		 (PMID:24385928)
PMID:21873635		 RGD PMID:24385928 PMID:21873635 RGD:13792537 NCBI chr 3:144,353,276...144,445,810
Ensembl chr 3:144,353,287...144,445,711 		JBrowse link
G Uqcc1-ps1 ubiquinol-cytochrome c reductase complex assembly factor 1, pseudogene 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:11,936,026...11,936,668
Ensembl chr17:11,936,099...11,936,668 		JBrowse link
G Uqcc2 ubiquinol-cytochrome c reductase complex assembly factor 2 involved_in ISO
IEA
IBA
ISS		 (PMID:24385928)
GO_REF:0000002
PMID:21873635
GO_REF:0000024		 RGD
InterPro
UniProt		 PMID:24385928 PMID:21873635 GO_REF:0000002 GO_REF:0000024, RGD:13792537 NCBI chr20:5,202,837...5,214,541
Ensembl chr20:5,202,837...5,214,164 		JBrowse link
G Uqcc3 ubiquinol-cytochrome c reductase complex assembly factor 3 involved_in IBA
ISS
ISO		 PMID:21873635
GO_REF:0000024
(PMID:25605331)		 UniProt
RGD		 PMID:25605331 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:205,773,591...205,774,369
Ensembl chr 1:205,772,780...205,774,376 		JBrowse link
G Uqcc4 ubiquinol-cytochrome c reductase complex assembly factor 4 involved_in ISO (MGI:7332658|PMID:35977508) RGD PMID:35977508 MGI:7332658 NCBI chr10:14,202,217...14,203,519
Ensembl chr10:14,202,243...14,204,029 		JBrowse link
G Uqcc5 ubiquinol-cytochrome c reductase complex assembly factor 5 involved_in ISO (MGI:7332658|PMID:35977508) RGD PMID:35977508 MGI:7332658 NCBI chr16:6,316,629...6,320,509
Ensembl chr16:6,286,300...6,320,642 		JBrowse link
G Uqcc6 ubiquinol-cytochrome c reductase complex assembly factor 6 involved_in ISO
IBA		 (PMID:32161263)
(MGI:6401640|PMID:32161263), (MGI:7332658|PMID:35977508)
PMID:21873635		 RGD PMID:32161263 PMID:35977508 PMID:21873635 MGI:6401640 MGI:7332658, RGD:13792537 NCBI chr 7:21,104,729...21,108,135
Ensembl chr 7:21,105,042...21,108,135 		JBrowse link
G Uqcrfs1 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 involved_in ISO (PMID:31883641) RGD PMID:31883641 NCBI chr17:33,977,908...33,982,478
Ensembl chr17:33,977,921...33,982,479 		JBrowse link
respiratory chain complex IV assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Coa6 cytochrome c oxidase assembly factor 6 involved_in ISO (PMID:24549041), (PMID:25959673), (PMID:26160915) RGD PMID:24549041 PMID:25959673 PMID:26160915 NCBI chr19:54,395,682...54,398,918
Ensembl chr19:54,395,742...54,399,407 		JBrowse link
G Cox10 cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10 involved_in ISO (PMID:14607829) RGD PMID:14607829 NCBI chr10:48,630,993...48,742,835
Ensembl chr10:48,630,676...48,746,667 		JBrowse link
G Cox15 cytochrome c oxidase assembly homolog COX15 involved_in ISO (PMID:12474143) RGD PMID:12474143 NCBI chr 1:242,605,588...242,622,279
Ensembl chr 1:242,605,588...242,622,261 		JBrowse link
G Cox18 cytochrome c oxidase assembly factor COX18 involved_in ISO UniProtKB:P53239 (PMID:16911509) RGD PMID:16911509 NCBI chr14:17,864,581...17,877,483
Ensembl chr14:17,865,857...17,877,480 		JBrowse link
G Mt-co3 mitochondrially encoded cytochrome c oxidase III involved_in ISS
ISO		 GO_REF:0000024
(PMID:8630495)		 UniProt
RGD		 PMID:8630495 GO_REF:0000024 NCBI chr MT:8,599...9,382
Ensembl chr MT:8,599...9,382 		JBrowse link
G Slc25a46 solute carrier family 25, member 46 acts_upstream_of_or_within ISO (PMID:27390132) RGD PMID:27390132 NCBI chr18:23,215,954...23,244,917
Ensembl chr18:23,215,962...23,244,314 		JBrowse link
G Tymp thymidine phosphorylase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:120,438,768...120,444,088
Ensembl chr 7:120,438,770...120,443,874
Ensembl chr 7:120,438,770...120,443,874 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19738
    cellular process 17330
      cellular component organization or biogenesis 6793
        cellular component organization 6548
          cellular component assembly 3036
            protein-containing complex assembly 1596
              cytochrome complex assembly 44
                cytochrome P450 4A1-heme linkage 0
                cytochrome b6f complex assembly 0
                cytochrome c-heme linkage + 1
                peroxidase-heme linkage + 0
                protein-heme P460 linkage + 0
                protein-heme linkage via 1'-L-histidine 0
                respiratory chain complex III assembly + 16
                respiratory chain complex IV assembly + 30
paths to the root