Uqcc1 (ubiquinol-cytochrome c reductase complex assembly factor 1) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Behavioral & Substance Use Disorder Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Uqcc1 (ubiquinol-cytochrome c reductase complex assembly factor 1) Rattus norvegicus
Analyze
Symbol: Uqcc1
Name: ubiquinol-cytochrome c reductase complex assembly factor 1
RGD ID: 1585681
Description: Predicted to be involved in mitochondrial respiratory chain complex III assembly. Predicted to be located in cytoplasmic vesicle and mitochondrial inner membrane. Predicted to be active in mitochondrion. Orthologous to human UQCC1 (ubiquinol-cytochrome c reductase complex assembly factor 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; aconitine; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC683512; similar to Basic FGF-repressed Zic-binding protein (mbFZb); ubiquinol-cytochrome c reductase complex chaperone; Uqcc
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Uqcc1-ps1  
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83164,813,398 - 164,905,892 (-)NCBIGRCr8
GRCr8 Ensembl3164,814,424 - 164,905,778 (-)EnsemblGRCr8 Ensembl
mRatBN7.23144,353,276 - 144,445,810 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3144,353,287 - 144,445,711 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3148,219,693 - 148,311,155 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03156,836,953 - 156,928,424 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03154,576,474 - 154,667,954 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03151,384,965 - 151,474,112 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3151,384,954 - 151,474,135 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03157,748,573 - 157,840,990 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera3143,077,638 - 143,168,240 (-)NCBICelera
Cytogenetic Map3q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:11118897   PMID:12477932   PMID:18614015   PMID:24385928   PMID:34800366  


Genomics

Comparative Map Data
Uqcc1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83164,813,398 - 164,905,892 (-)NCBIGRCr8
GRCr8 Ensembl3164,814,424 - 164,905,778 (-)EnsemblGRCr8 Ensembl
mRatBN7.23144,353,276 - 144,445,810 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3144,353,287 - 144,445,711 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3148,219,693 - 148,311,155 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03156,836,953 - 156,928,424 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03154,576,474 - 154,667,954 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03151,384,965 - 151,474,112 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3151,384,954 - 151,474,135 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03157,748,573 - 157,840,990 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera3143,077,638 - 143,168,240 (-)NCBICelera
Cytogenetic Map3q42NCBI
UQCC1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382035,302,578 - 35,411,973 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2035,302,566 - 35,412,031 (-)EnsemblGRCh38hg38GRCh38
GRCh372033,890,381 - 33,999,776 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362033,353,795 - 33,463,247 (-)NCBINCBI36Build 36hg18NCBI36
Build 342033,353,794 - 33,463,247NCBI
Celera2030,638,977 - 30,748,569 (-)NCBICelera
Cytogenetic Map20q11.22NCBI
HuRef2030,667,798 - 30,777,427 (-)NCBIHuRef
CHM1_12033,791,448 - 33,901,370 (-)NCBICHM1_1
T2T-CHM13v2.02037,023,439 - 37,132,841 (-)NCBIT2T-CHM13v2.0
Uqcc1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392155,688,806 - 155,772,230 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2155,688,814 - 155,772,230 (-)EnsemblGRCm39 Ensembl
GRCm382155,846,886 - 155,930,310 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2155,846,894 - 155,930,310 (-)EnsemblGRCm38mm10GRCm38
MGSCv372155,672,622 - 155,756,046 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362155,538,348 - 155,621,489 (-)NCBIMGSCv36mm8
Celera2161,779,639 - 161,863,573 (-)NCBICelera
Cytogenetic Map2H1NCBI
cM Map277.26NCBI
LOC102012974
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542226,009,078 - 26,096,300 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542226,009,078 - 26,096,300 (+)NCBIChiLan1.0ChiLan1.0
LOC100983071
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22141,037,093 - 41,146,181 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12041,030,197 - 41,138,162 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02031,632,012 - 31,739,994 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12032,754,820 - 32,861,330 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2032,754,820 - 32,861,330 (-)Ensemblpanpan1.1panPan2
UQCC1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12424,285,147 - 24,381,819 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2424,286,320 - 24,381,699 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2423,931,045 - 24,027,512 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02424,977,348 - 25,074,111 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2424,975,855 - 25,074,003 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12424,264,179 - 24,360,878 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02424,359,193 - 24,455,898 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02424,798,305 - 24,894,928 (-)NCBIUU_Cfam_GSD_1.0
LOC101971618
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640173,295,851 - 173,390,648 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365615,358,779 - 5,450,957 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365615,358,954 - 5,453,583 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
UQCC1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1738,658,579 - 38,775,328 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11738,661,544 - 38,775,354 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21744,042,305 - 44,072,594 (+)NCBISscrofa10.2Sscrofa10.2susScr3
UQCC1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1256,209,851 - 56,317,572 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl256,209,485 - 56,317,620 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660872,360,513 - 2,468,739 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
LOC101697349
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248423,977,737 - 4,084,558 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248423,978,051 - 4,085,983 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Uqcc1
429 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:338
Count of miRNA genes:218
Interacting mature miRNAs:245
Transcripts:ENSRNOT00000072679
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
12879876Bw182Body weight QTL 1820.003body mass (VT:0001259)body weight (CMO:0000012)3141555229186555229Rat
2301411Bp320Blood pressure QTL 3200.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)3141555229186555229Rat
1582233Insul10Insulin level QTL 105.40.0015blood insulin amount (VT:0001560)serum insulin level times blood glucose level (CMO:0002040)3133259579178259579Rat
12879872Cm97Cardiac mass QTL 970.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)3141555229186555229Rat
12879873Cm96Cardiac mass QTL 960.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)3141555229186555229Rat
1578653Vnigr3Vascular neointimal growth QTL 33.1artery morphology trait (VT:0002191)artery neointimal hyperplastic lesion area (CMO:0001414)3151075912189428310Rat
2302373Gluco39Glucose level QTL 395.01blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)3129154923182114333Rat
12879874Cm98Cardiac mass QTL 980.005heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)3141555229186555229Rat
12879875Kidm64Kidney mass QTL 640.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)3141555229186555229Rat
1298068Bp167Blood pressure QTL 1670.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3161492708189428310Rat
70216Cm14Cardiac mass QTL 142.1heart mass (VT:0007028)heart wet weight (CMO:0000069)351581665184004958Rat
2292591Esta4Estrogen-induced thymic atrophy QTL 4thymus mass (VT:0004954)thymus wet weight (CMO:0000855)367641776167835660Rat
61335Bp20Blood pressure QTL 203arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3161799493176036425Rat
1578754Stresp16Stress response QTL 1640.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)3133134628178134628Rat
1331726Bp208Blood pressure QTL 2083.129arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)3161799270187311134Rat
1582213Insul6Insulin level QTL 63.70.0009blood insulin amount (VT:0001560)calculated serum insulin level (CMO:0000359)3155759447189428310Rat
1300173Rf11Renal function QTL 113.38renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)3141508991166376254Rat
9589106Insul23Insulin level QTL 2313.860.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)3152055202189428310Rat
10755461Coatc16Coat color QTL 16coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)3142898802187898802Rat
8662816Vetf4Vascular elastic tissue fragility QTL 44renal artery integrity trait (VT:0010642)number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)379649560177741895Rat
1559282Emca5Estrogen-induced mammary cancer QTL 53.9mammary gland integrity trait (VT:0010552)percentage of study population developing mammary tumors during a period of time (CMO:0000948)3145335553189428310Rat
2303620Vencon4Ventilatory control QTL 43.9respiration trait (VT:0001943)tidal volume (CMO:0000222)3125116475170116475Rat
1582256Insul9Insulin level QTL 94.40.0016blood insulin amount (VT:0001560)absolute change in serum insulin level (CMO:0002038)3155759447189428310Rat
1576306Schws3Schwannoma susceptibility QTL 30.001nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)3139299381184299381Rat
5686842Rf59Renal function QTL 59urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)3122395989167395989Rat
1300159Kidm4Kidney mass QTL 43.83kidney mass (VT:0002707)right kidney wet weight to body weight ratio (CMO:0001953)3141508991177728348Rat
2301971Cm71Cardiac mass QTL 714.63heart left ventricle mass (VT:0007031)heart left ventricle weight (CMO:0000776)3131036586176036586Rat
631673Iddm13Insulin dependent diabetes mellitus QTL 131.30.663blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)3137114333182114333Rat
1582248Insul7Insulin level QTL 73.90.0041blood insulin amount (VT:0001560)calculated serum insulin level (CMO:0000359)3155759447189428310Rat
2301970Bw81Body weight QTL 815.19body mass (VT:0001259)body weight (CMO:0000012)3131036586176036586Rat
1581546Pur13Proteinuria QTL 132.930.0335urine total protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)398651826167012663Rat
1578666Vnigr1Vascular neointimal growth QTL 14.6artery morphology trait (VT:0002191)artery lumen area (CMO:0001409)3151075912189428310Rat
1578656Vnigr2Vascular neointimal growth QTL 24.2artery morphology trait (VT:0002191)lesioned artery residual lumen area (CMO:0001417)3151075912189428310Rat
12879871Am7Aortic mass QTL 70.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)3141555229186555229Rat
631541Bp81Blood pressure QTL 814arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3144575244189428310Rat
2293087Iddm27Insulin dependent diabetes mellitus QTL 272.68blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)3160357340167835660Rat

Markers in Region
AU049262  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.23144,425,088 - 144,425,200 (+)MAPPERmRatBN7.2
Rnor_6.03151,454,105 - 151,454,216NCBIRnor6.0
Rnor_5.03157,820,735 - 157,820,846UniSTSRnor5.0
Celera3143,148,014 - 143,148,125UniSTS
RH137298  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.23144,354,435 - 144,354,617 (+)MAPPERmRatBN7.2
Rnor_6.03151,386,125 - 151,386,306NCBIRnor6.0
Rnor_5.03157,749,733 - 157,749,914UniSTSRnor5.0
Celera3143,077,773 - 143,077,954UniSTS
UniSTS:234578  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.23144,354,686 - 144,354,788 (+)MAPPERmRatBN7.2
Rnor_6.03151,386,376 - 151,386,477NCBIRnor6.0
Rnor_5.03157,749,984 - 157,750,085UniSTSRnor5.0
Celera3143,078,024 - 143,078,126UniSTS
REN57263  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.23144,370,195 - 144,370,465 (+)MAPPERmRatBN7.2
Rnor_6.03151,401,882 - 151,402,151NCBIRnor6.0
Rnor_5.03157,765,490 - 157,765,759UniSTSRnor5.0
Celera3143,093,507 - 143,093,776UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 164 91 90 59 92 59 6 356 192 11 143 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000072679   ⟹   ENSRNOP00000066461
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3164,814,424 - 164,905,778 (-)Ensembl
mRatBN7.2 Ensembl3144,353,287 - 144,445,711 (-)Ensembl
Rnor_6.0 Ensembl3151,384,954 - 151,474,135 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000101088   ⟹   ENSRNOP00000093473
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3164,817,541 - 164,897,735 (-)Ensembl
mRatBN7.2 Ensembl3144,357,419 - 144,437,647 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000105431   ⟹   ENSRNOP00000093964
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3164,814,424 - 164,905,778 (-)Ensembl
mRatBN7.2 Ensembl3144,353,287 - 144,445,711 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000108633   ⟹   ENSRNOP00000076446
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3164,814,424 - 164,905,778 (-)Ensembl
mRatBN7.2 Ensembl3144,353,287 - 144,445,711 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000108696   ⟹   ENSRNOP00000077620
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3164,814,424 - 164,905,778 (-)Ensembl
mRatBN7.2 Ensembl3144,353,287 - 144,445,711 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000114179   ⟹   ENSRNOP00000080991
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl3144,353,291 - 144,444,823 (-)Ensembl
RefSeq Acc Id: NM_001109446   ⟹   NP_001102916
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83164,814,423 - 164,905,778 (-)NCBI
mRatBN7.23144,354,301 - 144,445,692 (-)NCBI
Rnor_6.03151,385,990 - 151,474,112 (-)NCBI
Rnor_5.03157,748,573 - 157,840,990 (-)NCBI
Celera3143,077,638 - 143,168,240 (-)RGD
Sequence:
RefSeq Acc Id: XM_039105859   ⟹   XP_038961787
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83164,828,145 - 164,905,892 (-)NCBI
mRatBN7.23144,368,160 - 144,445,810 (-)NCBI
RefSeq Acc Id: XM_039105861   ⟹   XP_038961789
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83164,813,398 - 164,897,013 (-)NCBI
mRatBN7.23144,353,276 - 144,445,718 (-)NCBI
RefSeq Acc Id: XM_039105862   ⟹   XP_038961790
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83164,813,398 - 164,905,789 (-)NCBI
mRatBN7.23144,353,276 - 144,445,703 (-)NCBI
RefSeq Acc Id: NP_001102916   ⟸   NM_001109446
- UniProtKB: Q32Q54 (UniProtKB/TrEMBL),   M0RAB6 (UniProtKB/TrEMBL),   A0A8I6G7D8 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000066461   ⟸   ENSRNOT00000072679
RefSeq Acc Id: XP_038961789   ⟸   XM_039105861
- Peptide Label: isoform X2
- UniProtKB: A6KI69 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038961790   ⟸   XM_039105862
- Peptide Label: isoform X3
- UniProtKB: A0A8I6G7D8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038961787   ⟸   XM_039105859
- Peptide Label: isoform X1
Ensembl Acc Id: ENSRNOP00000077620   ⟸   ENSRNOT00000108696
Ensembl Acc Id: ENSRNOP00000093964   ⟸   ENSRNOT00000105431
Ensembl Acc Id: ENSRNOP00000093473   ⟸   ENSRNOT00000101088
Ensembl Acc Id: ENSRNOP00000076446   ⟸   ENSRNOT00000108633
Ensembl Acc Id: ENSRNOP00000080991   ⟸   ENSRNOT00000114179
Protein Domains
Ubiquinol-cytochrome c chaperone

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q32Q54-F1-model_v2 AlphaFold Q32Q54 1-299 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13692591
Promoter ID:EPDNEW_R3116
Type:single initiation site
Name:Uqcc1_1
Description:ubiquinol-cytochrome c reductase complex assembly factor 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.03151,474,117 - 151,474,177EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1585681 AgrOrtholog
BioCyc Gene G2FUF-47114 BioCyc
Ensembl Genes ENSRNOG00000048309 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000072679 ENTREZGENE
  ENSRNOT00000072679.3 UniProtKB/TrEMBL
  ENSRNOT00000101088.1 UniProtKB/TrEMBL
  ENSRNOT00000105431.1 UniProtKB/TrEMBL
  ENSRNOT00000108633.1 UniProtKB/TrEMBL
  ENSRNOT00000108696.1 UniProtKB/TrEMBL
  ENSRNOT00000114179.1 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7321008 IMAGE-MGC_LOAD
InterPro Ubiq_cyt_c_chap/UPF0174 UniProtKB/TrEMBL
  Ubiqinol_cyt_c_chaperone_CPB3 UniProtKB/TrEMBL
KEGG Report rno:683512 UniProtKB/TrEMBL
MGC_CLONE MGC:125051 IMAGE-MGC_LOAD
NCBI Gene 683512 ENTREZGENE
PANTHER Ubiq_cyt_C_chap UniProtKB/TrEMBL
  UBIQUINOL-CYTOCHROME-C REDUCTASE COMPLEX ASSEMBLY FACTOR 1 UniProtKB/TrEMBL
Pfam Ubiq_cyt_C_chap UniProtKB/TrEMBL
PhenoGen Uqcc1 PhenoGen
RatGTEx ENSRNOG00000048309 RatGTEx
UniProt A0A8I5XZY9_RAT UniProtKB/TrEMBL
  A0A8I5ZKC3_RAT UniProtKB/TrEMBL
  A0A8I6ALE3_RAT UniProtKB/TrEMBL
  A0A8I6AMU7_RAT UniProtKB/TrEMBL
  A0A8I6G7D8 ENTREZGENE, UniProtKB/TrEMBL
  A6KI69 ENTREZGENE, UniProtKB/TrEMBL
  M0RAB6 ENTREZGENE, UniProtKB/TrEMBL
  Q32Q54 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-11-11 Uqcc1  ubiquinol-cytochrome c reductase complex assembly factor 1  Uqcc  ubiquinol-cytochrome c reductase complex chaperone  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2010-11-12 Uqcc  ubiquinol-cytochrome c reductase complex chaperone  LOC683512  similar to Basic FGF-repressed Zic-binding protein (mbFZb)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-11-19 LOC683512  similar to Basic FGF-repressed Zic-binding protein (mbFZb)      Symbol and Name status set to provisional 70820 PROVISIONAL