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ONTOLOGY REPORT - ANNOTATIONS

Term:microbody lumen
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Accession:GO:0031907 term browser browse the term
Definition:The volume enclosed by the membranes of a microbody.


show annotations for term's descendants           Sort by:
peroxisomal matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd3 ATP-binding cassette, sub-family D member 3 located_in IEA
ISO		 Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr 3:121,552,553...121,609,851
Ensembl chr 3:121,552,423...121,608,951 		JBrowse link
G Acaa1a acetyl-Coenzyme A acyltransferase 1A located_in TAS Reactome Reactome:R-MMU-9034356 NCBI chr 9:119,170,113...119,179,361
Ensembl chr 9:119,168,742...119,179,365 		JBrowse link
G Acot8 acyl-CoA thioesterase 8 is_active_in
located_in		 IBA
ISO
IEA		 GO_Central
UniProt		 GO_REF:0000033 GO_REF:0000044 GO_REF:0000119 NCBI chr 2:164,634,688...164,662,132
Ensembl chr 2:164,634,685...164,646,802 		JBrowse link
G Acox3 acyl-Coenzyme A oxidase 3, pristanoyl located_in TAS (PMID:10806321) MGI PMID:10806321 NCBI chr 5:35,740,293...35,772,397
Ensembl chr 5:35,740,384...35,772,696 		JBrowse link
G Agps alkylglycerone phosphate synthase located_in TAS Reactome Reactome:R-MMU-9033995 NCBI chr 2:75,662,477...75,761,694
Ensembl chr 2:75,662,521...75,761,694 		JBrowse link
G Agxt alanine-glyoxylate aminotransferase located_in IEA
ISO		 Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr 1:93,062,962...93,073,143
Ensembl chr 1:93,062,962...93,073,143 		JBrowse link
G Atm ataxia telangiectasia mutated is_active_in ISS
ISO		 UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000119 NCBI chr 9:53,348,422...53,448,125
Ensembl chr 9:53,350,449...53,448,040 		JBrowse link
G Cat catalase located_in IEA UniProt GO_REF:0000044 NCBI chr 2:103,284,249...103,315,498
Ensembl chr 2:103,284,194...103,315,505 		JBrowse link
G Dao D-amino acid oxidase located_in ISO
IDA		 (PMID:1686595) GO_Central
UniProt		 PMID:1686595 GO_REF:0000096 GO_REF:0000119 NCBI chr 5:114,137,696...114,163,736
Ensembl chr 5:114,141,764...114,163,743 		JBrowse link
G Ddo D-aspartate oxidase located_in ISS UniProt GO_REF:0000024 NCBI chr10:40,505,933...40,557,847
Ensembl chr10:40,506,007...40,557,843 		JBrowse link
G Eci2 enoyl-Coenzyme A delta isomerase 2 located_in ISS
IEA
ISO		 (PMID:10419495) UniProt
GO_Central		 PMID:10419495 GO_REF:0000044 GO_REF:0000119 NCBI chr13:35,161,731...35,211,098
Ensembl chr13:35,161,731...35,211,079 		JBrowse link
G Eci3 enoyl-Coenzyme A delta isomerase 3 located_in ISO GO_Central GO_REF:0000119 NCBI chr13:35,130,595...35,147,971
Ensembl chr13:35,130,597...35,147,793 		JBrowse link
G Fabp1 fatty acid binding protein 1, liver located_in ISO
IEA		 low level constitutive localization increased by clofibrate RGD
Ensembl
GO_Central		 PMID:16262600 GO_REF:0000096 GO_REF:0000107 RGD:1626442 NCBI chr 6:71,176,863...71,182,018
Ensembl chr 6:71,176,811...71,182,007 		JBrowse link
G Gnpat glyceronephosphate O-acyltransferase located_in TAS (PMID:10395968) MGI PMID:10395968 NCBI chr 8:125,589,772...125,616,796
Ensembl chr 8:125,589,772...125,616,796 		JBrowse link
G Hao1 hydroxyacid oxidase 1, liver located_in ISO
IEA		 GO_Central
UniProt		 GO_REF:0000044 GO_REF:0000119 NCBI chr 2:134,339,281...134,396,272
Ensembl chr 2:134,339,281...134,396,288 		JBrowse link
G Hao2 hydroxyacid oxidase 2 located_in
is_active_in		 IEA
ISO
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119 NCBI chr 3:98,781,835...98,802,692
Ensembl chr 3:98,781,837...98,800,555 		JBrowse link
G Hsd17b4 hydroxysteroid (17-beta) dehydrogenase 4 located_in TAS Reactome Reactome:R-MMU-9034351 NCBI chr18:50,261,268...50,329,337
Ensembl chr18:50,261,268...50,329,336 		JBrowse link
G Hspd1 heat shock protein 1 (chaperonin) located_in ISO RGD
GO_Central		 PMID:8882520 GO_REF:0000096 RGD:10403038 NCBI chr 1:55,116,992...55,127,402
Ensembl chr 1:55,116,994...55,127,402 		JBrowse link
G Hspe1 heat shock protein 1 (chaperonin 10) IDA RGD PMID:8882520 RGD:10403038 NCBI chr 1:55,127,307...55,130,476
Ensembl chr 1:55,127,291...55,130,466 		JBrowse link
G Ide insulin degrading enzyme is_active_in
located_in		 ISO
IBA		 RGD
GO_Central		 PMID:11235899 GO_REF:0000033 GO_REF:0000096 RGD:1627575 NCBI chr19:37,246,140...37,341,664
Ensembl chr19:37,246,142...37,340,010 		JBrowse link
G Lonp2 lon peptidase 2, peroxisomal is_active_in
located_in		 ISO
IBA
ISS		 (PMID:14561759) RGD
GO_Central
HGNC-UCL		 PMID:14561759 GO_REF:0000033 GO_REF:0000096 RGD:1580664 NCBI chr 8:87,350,672...87,443,264
Ensembl chr 8:87,350,672...87,450,501 		JBrowse link
G Mlycd malonyl-CoA decarboxylase is_active_in
located_in		 IBA
ISO
ISS		 GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000096 NCBI chr 8:120,121,591...120,148,577
Ensembl chr 8:120,121,617...120,137,841 		JBrowse link
G Mvd mevalonate (diphospho) decarboxylase located_in ISO RGD
GO_Central		 PMID:11767099 GO_REF:0000096 RGD:729305 NCBI chr 8:123,160,335...123,170,161
Ensembl chr 8:123,160,340...123,170,161 		JBrowse link
G Nudt7 nudix hydrolase 7 located_in TAS Reactome Reactome:R-MMU-6810452 NCBI chr 8:114,860,314...114,881,471
Ensembl chr 8:114,860,297...114,881,479 		JBrowse link
G Paox polyamine oxidase (exo-N4-amino) located_in ISO
IEA		 RGD
GO_Central
Ensembl		 PMID:7560898 GO_REF:0000096 GO_REF:0000107 RGD:7244191 NCBI chr 7:139,693,182...139,714,249
Ensembl chr 7:139,695,712...139,717,137 		JBrowse link
G Pex5 peroxisomal biogenesis factor 5 is_active_in
located_in		 ISS
ISO		 UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000119 NCBI chr 6:124,373,774...124,392,878
Ensembl chr 6:124,373,775...124,392,026 		JBrowse link
G Pex7 peroxisomal biogenesis factor 7 is_active_in
located_in		 IBA
ISS
ISO		 GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000119 NCBI chr10:19,735,836...19,783,420
Ensembl chr10:19,729,646...19,783,435 		JBrowse link
G Phyh phytanoyl-CoA hydroxylase located_in TAS Reactome Reactome:R-MMU-9034001 NCBI chr 2:4,923,807...4,943,554
Ensembl chr 2:4,923,830...4,943,541 		JBrowse link
G Pomc pro-opiomelanocortin-alpha located_in ISO GO_Central GO_REF:0000119 NCBI chr12:4,004,945...4,010,643
Ensembl chr12:4,004,951...4,010,642 		JBrowse link
G Prdx1 peroxiredoxin 1 located_in ISO RGD
GO_Central		 PMID:14623930 GO_REF:0000096 RGD:2291802 NCBI chr 4:116,542,796...116,557,196
Ensembl chr 4:116,542,741...116,558,019 		JBrowse link
G Prdx5 peroxiredoxin 5 located_in ISO
ISS		 (PMID:10514471) GO_Central
UniProt		 PMID:10514471 GO_REF:0000119 NCBI chr19:6,884,065...6,887,474
Ensembl chr19:6,884,065...6,887,474 		JBrowse link
G Scp2 sterol carrier protein 2, liver located_in ISO
TAS
ISS		 RGD
Reactome
UniProt
GO_Central		 PMID:8063752 GO_REF:0000024 GO_REF:0000096 RGD:9850162 Reactome:R-MMU-9034335 NCBI chr 4:107,901,027...108,002,168
Ensembl chr 4:107,901,036...108,002,195 		JBrowse link
G Tysnd1 trypsin domain containing 1 located_in TAS Reactome Reactome:R-MMU-9033995 Reactome:R-MMU-9034001 Reactome:R-MMU-9034335 Reactome:R-MMU-9034351 Reactome:R-MMU-9034356 Reactome:R-NUL-9034341 NCBI chr10:61,531,279...61,538,552
Ensembl chr10:61,531,293...61,538,552 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 28568
    cellular anatomical structure 19603
      cytoplasm 12089
        microbody 157
          microbody lumen 33
            peroxisomal matrix + 33
Path 2
Term Annotations click to browse term
  cellular_component 28568
    cellular anatomical structure 19603
      organelle 13749
        intracellular organelle 13342
          intracellular membrane-bounded organelle 12233
            microbody 157
              microbody lumen 33
                peroxisomal matrix + 33
paths to the root