Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:liver development
go back to main search page
Accession:GO:0001889 term browser browse the term
Definition:The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes.

GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
liver development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aacs acetoacetyl-CoA synthetase ISO RGD PMID:10513626 RGD:2301023 NCBI chrNW_004936558:327,822...373,474
Ensembl chrNW_004936558:327,407...373,683 		JBrowse link
G Acadm acyl-CoA dehydrogenase medium chain acts_upstream_of_or_within ISO (PMID:16121256) MGI PMID:16121256 NCBI chrNW_004936571:2,761,254...2,797,045 JBrowse link
G Acat1 acetyl-CoA acetyltransferase 1 ISO RGD PMID:5166591 RGD:2326169 NCBI chrNW_004936551:594,647...626,016
Ensembl chrNW_004936551:591,695...626,056 		JBrowse link
G Acat2 acetyl-CoA acetyltransferase 2 ISO RGD PMID:5166591 RGD:2326169 NCBI chrNW_004936489:11,255,871...11,273,848
Ensembl chrNW_004936489:11,255,871...11,283,216 		JBrowse link
G Aco1 aconitase 1 ISO RGD PMID:755797 RGD:11552585 NCBI chrNW_004936524:1,081,672...1,134,971
Ensembl chrNW_004936524:1,081,696...1,134,971 		JBrowse link
G Aco2 aconitase 2 ISO RGD PMID:755797 RGD:11552585 NCBI chrNW_004936492:407,482...452,538
Ensembl chrNW_004936492:407,482...452,537 		JBrowse link
G Ada adenosine deaminase acts_upstream_of_or_within ISO (PMID:7670465)
(PMID:7731963)		 MGI PMID:7670465 PMID:7731963 NCBI chrNW_004936530:2,217,713...2,224,070 JBrowse link
G Adrb2 adrenoceptor beta 2 ISO RGD PMID:8408243 RGD:8548535 NCBI chrNW_004936504:5,985,407...5,987,453
Ensembl chrNW_004936504:5,985,960...5,987,210 		JBrowse link
G Afp alpha fetoprotein ISO RGD PMID:16822301 RGD:2292045 NCBI chrNW_004936598:2,058,474...2,077,711
Ensembl chrNW_004936598:2,058,117...2,077,728 		JBrowse link
G Ahr aryl hydrocarbon receptor involved_in ISO (MGI:1889403|PMID:10973493), (MGI:72762|PMID:7732381), (MGI:81320|PMID:8692887) DFLAT PMID:7732381 PMID:8692887 PMID:10973493 MGI:1889403 MGI:72762 MGI:81320 NCBI chrNW_004936546:3,737,908...3,783,492
Ensembl chrNW_004936546:3,737,851...3,783,588 		JBrowse link
G Ak2 adenylate kinase 2 ISO RGD PMID:5123889 RGD:5490208 NCBI chrNW_004936474:15,887,014...15,908,522 JBrowse link
G Ak3 adenylate kinase 3 ISO RGD PMID:5123889 RGD:5490208 NCBI chrNW_004936503:497,391...517,011
Ensembl chrNW_004936503:496,965...516,888 		JBrowse link
G Ak4 adenylate kinase 4 ISO RGD PMID:9813319 RGD:632174 NCBI chrNW_004936692:2,593,409...2,654,583 JBrowse link
G Aldh1a1 aldehyde dehydrogenase 1 family member A1 ISO RGD PMID:14729401 RGD:1643117 NCBI chrNW_004936503:8,869,073...8,953,726
Ensembl chrNW_004936503:8,868,961...8,918,532 		JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family member A2 ISO RGD PMID:14729401 RGD:1643117 NCBI chrNW_004936471:19,175,997...19,263,335
Ensembl chrNW_004936471:19,175,992...19,263,335 		JBrowse link
G Aldh2 aldehyde dehydrogenase 2 family member ISO RGD PMID:16291827 RGD:2300311 NCBI chrNW_004936558:4,362,693...4,387,705
Ensembl chrNW_004936558:4,362,654...4,390,414 		JBrowse link
G Aldh9a1 aldehyde dehydrogenase 9 family member A1 ISO RGD PMID:19150623 RGD:2313411 NCBI chrNW_004936481:19,630,045...19,650,009 JBrowse link
G Aldob aldolase, fructose-bisphosphate B ISO RGD PMID:8641049 RGD:2313428 NCBI chrNW_004936524:9,584,302...9,592,961
Ensembl chrNW_004936524:9,584,140...9,596,276 		JBrowse link
G Ang angiogenin ISO RGD PMID:2440105 RGD:2325721 NCBI chrNW_004936880:39,372...40,070 JBrowse link
G Arf6 ADP ribosylation factor 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16880525) Ensembl
MGI		 PMID:16880525 GO_REF:0000107 NCBI chrNW_004936583:181,490...185,466
Ensembl chrNW_004936583:181,490...185,471 		JBrowse link
G Asl argininosuccinate lyase ISO DNA:increased methylation:5' utr RGD PMID:9535537 PMID:10473900 RGD:1599266 RGD:1599268 NCBI chrNW_004936543:7,688,788...7,699,842
Ensembl chrNW_004936543:7,688,741...7,699,851 		JBrowse link
G Asns asparagine synthetase (glutamine-hydrolyzing) ISO RGD PMID:237754 RGD:2316008 NCBI chrNW_004936585:2,834,202...2,854,740
Ensembl chrNW_004936585:2,834,008...2,855,387 		JBrowse link
G Ass1 argininosuccinate synthase 1 ISO RGD PMID:9395312 PMID:10473900 RGD:1599266 RGD:4139912 NCBI chrNW_004936487:17,482,307...17,527,407
Ensembl chrNW_004936487:17,486,826...17,527,435 		JBrowse link
G Atf2 activating transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:4,729,984...4,826,367
Ensembl chrNW_004936509:4,732,930...4,826,443 		JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO (PMID:15866887) MGI PMID:15866887 NCBI chrNW_004936602:1,938,720...2,179,239
Ensembl chrNW_004936602:1,935,507...2,179,256 		JBrowse link
G Atp5f1b ATP synthase F1 subunit beta ISO RGD PMID:8420961 RGD:13792579 NCBI chrNW_004936646:951,236...958,907 JBrowse link
G Atp7a ATPase copper transporting alpha ISO RGD PMID:25349135 RGD:11341669 NCBI chrNW_004936683:2,874,022...2,936,214
Ensembl chrNW_004936683:2,874,042...2,935,040 		JBrowse link
G Baat bile acid-CoA:amino acid N-acyltransferase ISO RGD PMID:7575455 RGD:69770 NCBI chrNW_004936524:9,536,032...9,544,901
Ensembl chrNW_004936524:9,536,010...9,545,076 		JBrowse link
G Bdh1 3-hydroxybutyrate dehydrogenase 1 ISO RGD PMID:2806552 RGD:4105456 NCBI chrNW_004936833:367,790...409,966
Ensembl chrNW_004936833:367,710...410,139 		JBrowse link
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase ISO RGD PMID:14160653 RGD:2303538 NCBI chrNW_004936493:5,308,268...5,332,934
Ensembl chrNW_004936493:5,310,228...5,332,918 		JBrowse link
G Cadm1 cell adhesion molecule 1 ISO RGD PMID:17326163 RGD:2289097 NCBI chrNW_004936542:569,739...883,738
Ensembl chrNW_004936542:565,843...883,609 		JBrowse link
G Cast calpastatin ISO RGD PMID:16871587 RGD:5683869 NCBI chrNW_004936523:6,688,153...6,798,184
Ensembl chrNW_004936523:6,686,519...6,798,321 		JBrowse link
G Ccnd1 cyclin D1 ISO RGD PMID:15809057 RGD:1582338 Ensembl chrNW_004936599:973,838...983,316 JBrowse link
G Ccnd2 cyclin D2 ISO RGD PMID:15809057 RGD:1582338 NCBI chrNW_004936606:4,474,801...4,496,158
Ensembl chrNW_004936606:4,474,749...4,496,810 		JBrowse link
G Ccne1 cyclin E1 ISO RGD PMID:15809057 RGD:1582338 NCBI chrNW_004936570:5,536,817...5,547,880
Ensembl chrNW_004936570:5,536,672...5,548,008 		JBrowse link
G Cd2ap CD2 associated protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29729186) Ensembl
MGI		 PMID:29729186 GO_REF:0000107 NCBI chrNW_004936476:12,890,595...12,989,046
Ensembl chrNW_004936476:12,890,468...12,987,843 		JBrowse link
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:13,345,443...13,355,841
Ensembl chrNW_004936490:13,345,443...13,355,841 		JBrowse link
G Cdkn2b cyclin dependent kinase inhibitor 2B ISO RGD PMID:11042273 RGD:7248763 NCBI chrNW_004936652:3,576,975...3,582,790
Ensembl chrNW_004936652:3,538,986...3,581,159 		JBrowse link
G Cebpa CCAAT enhancer binding protein alpha acts_upstream_of_or_within
involved_in		 ISO (PMID:17021047)
(MGI:83240|PMID:8798745)		 RGD
MGI
UniProt		 PMID:8798745 PMID:16172914 PMID:17021047 MGI:83240 RGD:1625368 NCBI chrNW_004936570:2,513,561...2,516,213 JBrowse link
G Cebpg CCAAT enhancer binding protein gamma involved_in ISO PMID:1377818 UniProt PMID:1377818 RGD:69946 NCBI chrNW_004936570:2,435,672...2,439,056
Ensembl chrNW_004936570:2,438,187...2,438,639 		JBrowse link
G Cit citron rho-interacting serine/threonine kinase ISO RGD PMID:12411428 RGD:628497 NCBI chrNW_004936668:991,043...1,146,578
Ensembl chrNW_004936668:991,036...1,146,294 		JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17644732) Ensembl
MGI		 PMID:17644732 GO_REF:0000107 NCBI chrNW_004936560:6,353,901...6,356,749
Ensembl chrNW_004936560:6,354,338...6,356,735 		JBrowse link
G Cobl cordon-bleu WH2 repeat protein involved_in ISO (MGI:76306|PMID:7586755) BHF-UCL PMID:7586755 MGI:76306 NCBI chrNW_004936686:621,502...872,824 JBrowse link
G Cp ceruloplasmin ISO RGD PMID:2332446 RGD:728241 NCBI chrNW_004936519:6,431,156...6,473,183
Ensembl chrNW_004936519:6,431,144...6,481,858 		JBrowse link
G Cps1 carbamoyl-phosphate synthase 1 ISO RGD PMID:8690412 RGD:4144072 NCBI chrNW_004936586:5,739,038...5,850,317
Ensembl chrNW_004936586:5,739,337...5,850,312 		JBrowse link
G Ctnnb1 catenin beta 1 ISO RGD PMID:17236583 RGD:1599633 NCBI chrNW_004936473:29,999,542...30,034,610
Ensembl chrNW_004936473:29,999,562...30,038,293 		JBrowse link
G Dbp D-box binding PAR bZIP transcription factor ISO RGD PMID:2331750 RGD:727680 NCBI chrNW_004936664:2,676,754...2,682,425
Ensembl chrNW_004936664:2,676,754...2,682,425 		JBrowse link
G Ddx39b DExD-box helicase 39B ISO RGD PMID:1618789 RGD:632224 NCBI chrNW_004936727:1,968,032...1,980,789
Ensembl chrNW_004936727:1,968,094...1,980,785 		JBrowse link
G Dut deoxyuridine triphosphatase ISO RGD PMID:11121581 RGD:5133681 NCBI chrNW_004936471:10,670,604...10,681,356 JBrowse link
G Egfr epidermal growth factor receptor ISO RGD PMID:12454858 RGD:2289959 NCBI chrNW_004936678:365,005...560,546
Ensembl chrNW_004936678:365,834...436,528 		JBrowse link
G Elk1 ETS transcription factor ELK1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:31877385) Ensembl
MGI		 PMID:31877385 GO_REF:0000107 NCBI chrNW_004936502:13,402,726...13,418,214
Ensembl chrNW_004936502:13,402,728...13,418,214 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO RGD PMID:10231554 RGD:13204733 NCBI chrNW_004937067:194,375...246,607 JBrowse link
G Ephx1 epoxide hydrolase 1 ISO RGD PMID:2469391 RGD:4889418 NCBI chrNW_004936526:2,589,254...2,652,831
Ensembl chrNW_004936526:2,614,059...2,653,286 		JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 ISO RGD PMID:12454858 RGD:2289959 NCBI chrNW_004936490:14,887,062...14,910,038
Ensembl chrNW_004936490:14,887,043...14,909,956 		JBrowse link
G Errfi1 ERBB receptor feedback inhibitor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22912762)
(PMID:28053990)		 Ensembl
MGI		 PMID:22912762 PMID:28053990 GO_REF:0000107 NCBI chrNW_004936623:2,457,709...2,462,956
Ensembl chrNW_004936623:2,456,294...2,462,467 		JBrowse link
G Foxm1 forkhead box M1 acts_upstream_of_or_within ISO (PMID:15531365) MGI PMID:15531365 NCBI chrNW_004936606:3,185,289...3,198,427
Ensembl chrNW_004936606:3,185,982...3,198,378 		JBrowse link
G Fpgs folylpolyglutamate synthase ISO RGD PMID:1435744 RGD:2315102 NCBI chrNW_004936487:15,453,010...15,466,591
Ensembl chrNW_004936487:15,453,032...15,468,985 		JBrowse link
G Fscn1 fascin actin-bundling protein 1 ISO RGD PMID:18855019 RGD:2317768 NCBI chrNW_004936765:609,894...619,417
Ensembl chrNW_004936765:609,861...619,456 		JBrowse link
G Gata6 GATA binding protein 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15767668) Ensembl
MGI		 PMID:15767668 GO_REF:0000107 NCBI chrNW_004936550:1,814,336...1,844,399
Ensembl chrNW_004936550:1,814,336...1,844,399 		JBrowse link
G Gfer growth factor, augmenter of liver regeneration involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936694:2,051,362...2,053,812
Ensembl chrNW_004936694:2,051,325...2,053,818 		JBrowse link
G Gnpnat1 glucosamine-phosphate N-acetyltransferase 1 ISO RGD PMID:3996734 RGD:2302171 NCBI chrNW_004936697:2,079,396...2,087,602
Ensembl chrNW_004936697:2,079,470...2,086,877 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15578515) Ensembl
MGI		 PMID:15578515 GO_REF:0000107 NCBI chrNW_004936711:640,002...642,580
Ensembl chrNW_004936711:639,905...642,622 		JBrowse link
G Hgf hepatocyte growth factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16880525) Ensembl
MGI		 PMID:16880525 GO_REF:0000107 NCBI chrNW_004936734:354,798...428,356
Ensembl chrNW_004936734:356,115...428,779 		JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO (PMID:15459110)
(PMID:11027604)
(PMID:10804184), (PMID:16364283)		 MGI PMID:10804184 PMID:11027604 PMID:15459110 PMID:16364283 NCBI chrNW_004936601:2,137,490...2,143,797
Ensembl chrNW_004936601:2,136,873...2,143,857 		JBrowse link
G Hlx H2.0 like homeobox involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8557196) Ensembl
MGI		 PMID:8557196 GO_REF:0000107 NCBI chrNW_004936650:1,416,825...1,422,595
Ensembl chrNW_004936650:1,416,812...1,422,588 		JBrowse link
G Hmbs hydroxymethylbilane synthase ISO RGD PMID:971328 RGD:25394583 NCBI chrNW_004936542:4,037,888...4,046,089
Ensembl chrNW_004936542:4,037,201...4,050,810 		JBrowse link
G Hmgcl 3-hydroxy-3-methylglutaryl-CoA lyase ISO RGD PMID:13990 RGD:2326149 NCBI chrNW_004936474:8,955,216...8,971,078
Ensembl chrNW_004936474:8,954,379...8,971,132 		JBrowse link
G Hmgcs1 3-hydroxy-3-methylglutaryl-CoA synthase 1 ISO RGD PMID:5166591 RGD:2326169 NCBI chrNW_004936480:18,862,288...18,882,614
Ensembl chrNW_004936480:18,862,238...18,882,616 		JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 ISO RGD PMID:8620869 RGD:2326125 NCBI chrNW_004936627:4,451,847...4,473,163
Ensembl chrNW_004936627:4,451,823...4,473,223 		JBrowse link
G Hnf1a HNF1 homeobox A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9566924) Ensembl
MGI
InterPro		 PMID:9566924 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936668:62,103...81,549
Ensembl chrNW_004936668:67,535...81,505 		JBrowse link
G Hnf1b HNF1 homeobox B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18635606) InterPro
MGI
Ensembl		 PMID:18635606 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936490:649,551...702,448
Ensembl chrNW_004936490:649,546...702,672 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D ISO RGD PMID:20102719 RGD:10042969 NCBI chrNW_004936738:2,096,370...2,115,135
Ensembl chrNW_004936738:2,096,370...2,113,604 		JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:16488668 RGD:10002779 NCBI chrNW_004936828:827,660...839,088
Ensembl chrNW_004936828:828,837...838,720 		JBrowse link
G Hras HRas proto-oncogene, GTPase ISO RGD PMID:2581126 RGD:14694813 NCBI chrNW_004936888:375,372...378,125
Ensembl chrNW_004936888:375,377...377,958 		JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO (PMID:11773599), (PMID:9176412) MGI PMID:9176412 PMID:11773599 NCBI chrNW_004936720:1,041,216...1,168,725
Ensembl chrNW_004936720:1,041,211...1,168,748 		JBrowse link
G Igf2r insulin like growth factor 2 receptor ISO RGD PMID:12127995 RGD:2311626 NCBI chrNW_004936489:11,447,043...11,523,695
Ensembl chrNW_004936489:11,447,038...11,524,174 		JBrowse link
G Insr insulin receptor ISO RGD PMID:6364984 RGD:14701029 NCBI chrNW_004936588:4,345,306...4,453,380
Ensembl chrNW_004936588:4,345,306...4,453,668 		JBrowse link
G Jarid2 jumonji and AT-rich interaction domain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9376320) Ensembl
MGI		 PMID:9376320 GO_REF:0000107 NCBI chrNW_004936552:1,566,382...1,786,837
Ensembl chrNW_004936552:1,566,788...1,785,490 		JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (PMID:10352021) MGI PMID:10352021 NCBI chrNW_004936522:3,034,364...3,037,632
Ensembl chrNW_004936522:3,035,346...3,036,350 		JBrowse link
G Klf1 KLF transcription factor 1 acts_upstream_of_or_within ISO (PMID:7753194) MGI PMID:7753194 NCBI chrNW_004936659:1,946,614...1,950,003
Ensembl chrNW_004936659:1,947,075...1,950,003 		JBrowse link
G Kras KRAS proto-oncogene, GTPase ISO RGD PMID:1526114 RGD:11060153 NCBI chrNW_004936548:2,078,568...2,113,877
Ensembl chrNW_004936548:2,079,036...2,110,523 		JBrowse link
G Lbp lipopolysaccharide binding protein ISO RGD PMID:20978830 RGD:9685195 NCBI chrNW_004936561:3,017,471...3,035,481
Ensembl chrNW_004936561:3,016,926...3,035,552 		JBrowse link
G Ldha lactate dehydrogenase A ISO RGD PMID:6849973 RGD:1600284 NCBI chrNW_004936528:866,607...879,977 JBrowse link
G Lipc lipase C, hepatic type ISO RGD PMID:11004003 RGD:2307448 NCBI chrNW_004936471:19,604,083...19,733,721
Ensembl chrNW_004936471:19,703,236...19,733,686 		JBrowse link
G LOC101954516 signal transducer and activator of transcription 5B ISO RGD PMID:17565389 RGD:2291935 NCBI chrNW_004936490:17,022,268...17,043,751
Ensembl chrNW_004936490:17,021,051...17,043,941 		JBrowse link
G LOC101960702 lysosomal acid lipase/cholesteryl ester hydrolase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936601:4,975,296...5,008,938
Ensembl chrNW_004936601:4,975,211...5,008,962 		JBrowse link
G LOC101960773 cyclic AMP-dependent transcription factor ATF-7 involved_in ISO (PMID:17699753) MGI PMID:17699753 NCBI chrNW_004936512:10,780,826...10,884,806
Ensembl chrNW_004936512:10,785,763...10,884,795 		JBrowse link
G LOC101960907 uncharacterized LOC101960907 acts_upstream_of_or_within ISO (PMID:17936262) MGI PMID:17936262 NCBI chrNW_004936471:14,532,888...14,581,258
Ensembl chrNW_004936471:14,532,892...14,566,904 		JBrowse link
G LOC101965998 notch receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25446530) Ensembl
MGI		 PMID:25446530 GO_REF:0000107 NCBI chrNW_004936872:454,273...539,544
Ensembl chrNW_004936872:390,852...536,321 		JBrowse link
G LOC101969148 cytochrome P450 1A1 ISO RGD PMID:12162855 RGD:727721 NCBI chrNW_004936471:33,682,730...33,688,332
Ensembl chrNW_004936471:33,682,730...33,688,332 		JBrowse link
G LOC101976500 haptoglobin ISO RGD PMID:16172914 RGD:1625368 NCBI chrNW_004936475:21,841,054...21,845,821 JBrowse link
G Lsr lipolysis stimulated lipoprotein receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936570:1,023,967...1,038,223
Ensembl chrNW_004936570:1,023,960...1,038,587 		JBrowse link
G Man2a1 mannosidase alpha class 2A member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16754854) Ensembl
MGI		 PMID:16754854 GO_REF:0000107 NCBI chrNW_004936531:4,331,354...4,494,110
Ensembl chrNW_004936531:4,331,200...4,494,131 		JBrowse link
G Med1 mediator complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14500757) Ensembl
MGI		 PMID:14500757 GO_REF:0000107 NCBI chrNW_004936490:14,625,201...14,663,184
Ensembl chrNW_004936490:14,625,897...14,657,802 		JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:7651534) RGD
MGI		 PMID:7651534 PMID:8506951 RGD:2317549 NCBI chrNW_004936589:2,280,803...2,390,179
Ensembl chrNW_004936589:2,280,799...2,390,179 		JBrowse link
G Mpst mercaptopyruvate sulfurtransferase ISO RGD PMID:6573924 RGD:9685558 NCBI chrNW_004936492:3,873,295...3,876,895
Ensembl chrNW_004936492:3,873,176...3,876,706 		JBrowse link
G Mrtfb myocardin related transcription factor B acts_upstream_of_or_within ISO (PMID:17183527) MGI PMID:17183527 NCBI chrNW_004936501:2,414,696...2,571,627
Ensembl chrNW_004936501:2,468,345...2,567,234 		JBrowse link
G Mst1r macrophage stimulating 1 receptor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936529:1,494,748...1,509,925
Ensembl chrNW_004936529:1,495,059...1,509,901 		JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19632871) Ensembl
MGI		 PMID:19632871 GO_REF:0000107 NCBI chrNW_004936490:17,305,033...17,312,167
Ensembl chrNW_004936490:17,304,586...17,314,521 		JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7926784) Ensembl
MGI		 PMID:7926784 GO_REF:0000107 NCBI chrNW_004936538:3,394,623...3,596,025
Ensembl chrNW_004936538:3,398,222...3,595,261 		JBrowse link
G Nodal nodal growth differentiation factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11311163) Ensembl
MGI		 PMID:11311163 GO_REF:0000107 NCBI chrNW_004936521:8,171,146...8,178,802
Ensembl chrNW_004936521:8,171,146...8,178,705 		JBrowse link
G Notch1 notch receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15226394) Ensembl
MGI		 PMID:15226394 GO_REF:0000107 NCBI chrNW_004936669:1,292,016...1,334,061
Ensembl chrNW_004936669:1,292,088...1,332,428 		JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21289032) Ensembl
MGI		 PMID:21289032 GO_REF:0000107 NCBI chrNW_004936550:2,983,172...3,032,222
Ensembl chrNW_004936550:2,980,442...3,032,229 		JBrowse link
G Nr1h3 nuclear receptor subfamily 1 group H member 3 ISO RGD PMID:17341476 RGD:401827282 NCBI chrNW_004936562:1,937,665...1,946,680
Ensembl chrNW_004936562:1,937,667...1,946,669 		JBrowse link
G Nts neurotensin ISO RGD PMID:8342998 RGD:9743870 NCBI chrNW_004936507:3,318,982...3,329,248
Ensembl chrNW_004936507:3,318,915...3,329,342 		JBrowse link
G Onecut1 one cut homeobox 1 involved_in IEA Ensembl GO_REF:0000107
G Onecut2 one cut homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17936262) Ensembl
MGI		 PMID:17936262 GO_REF:0000107 NCBI chrNW_004936497:6,853,739...6,896,408
Ensembl chrNW_004936497:6,854,238...6,895,660 		JBrowse link
G Otc ornithine transcarbamylase ISO RGD PMID:8690412 RGD:4144072 NCBI chrNW_004936502:5,234,253...5,291,891
Ensembl chrNW_004936502:5,234,253...5,291,891 		JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936522:6,271,339...6,300,202
Ensembl chrNW_004936522:6,272,507...6,299,917 		JBrowse link
G Pdx1 pancreatic and duodenal homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19619492) Ensembl
MGI		 PMID:19619492 GO_REF:0000107 NCBI chrNW_004936472:23,102,534...23,107,127
Ensembl chrNW_004936472:23,102,534...23,107,127 		JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24691033) Ensembl
MGI		 PMID:24691033 GO_REF:0000107 NCBI chrNW_004936566:3,924,013...3,951,052
Ensembl chrNW_004936566:3,923,934...3,951,073 		JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21685914) Ensembl
MGI		 PMID:21685914 GO_REF:0000107 NCBI chrNW_004936694:1,923,383...1,958,160
Ensembl chrNW_004936694:1,930,621...1,957,179 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21685914) Ensembl
MGI		 PMID:21685914 GO_REF:0000107 NCBI chrNW_004936905:76,781...128,995 JBrowse link
G Pkm pyruvate kinase M1/2 ISO RGD PMID:7327170 RGD:2303137 NCBI chrNW_004936471:31,589,322...31,617,891
Ensembl chrNW_004936471:31,589,324...31,617,873 		JBrowse link
G Ppdpf pancreatic progenitor cell differentiation and proliferation factor acts_upstream_of_or_within ISO (PMID:34031390) MGI PMID:34031390 NCBI chrNW_004936514:10,820,874...10,822,054
Ensembl chrNW_004936514:10,820,889...10,822,054 		JBrowse link
G Prkcsh PRKCSH beta subunit of glucosidase II involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21685914) Ensembl
MGI
TreeGrafter		 PMID:21685914 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936659:1,501,425...1,511,634
Ensembl chrNW_004936659:1,501,419...1,511,625 		JBrowse link
G Proc protein C, inactivator of coagulation factors Va and VIIIa acts_upstream_of_or_within ISO (PMID:9788960) RGD
MGI		 PMID:7660357 PMID:9788960 RGD:1299299 NCBI chrNW_004936469:43,841,989...43,850,322
Ensembl chrNW_004936469:43,841,989...43,850,304 		JBrowse link
G Pros1 protein S ISO RGD PMID:7660357 RGD:1299299 NCBI chrNW_004936666:18,303...110,357
Ensembl chrNW_004936666:19,387...110,014 		JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:16770575 GO_REF:0000107 RGD:5133274 NCBI chrNW_004936628:4,185,712...4,240,680
Ensembl chrNW_004936628:4,185,706...4,238,451 		JBrowse link
G Psmb9 proteasome 20S subunit beta 9 ISO RGD PMID:24707720 RGD:9854625 NCBI chrNW_004936476:25,894,313...25,899,132
Ensembl chrNW_004936476:25,894,027...25,899,319 		JBrowse link
G Ptcd2 pentatricopeptide repeat domain 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18729827) Ensembl
MGI		 PMID:18729827 GO_REF:0000107 NCBI chrNW_004936549:4,135,854...4,164,991
Ensembl chrNW_004936549:4,135,811...4,165,009 		JBrowse link
G Ptn pleiotrophin ISO RGD PMID:12057922 RGD:727382 NCBI chrNW_004936592:1,706,979...1,806,345
Ensembl chrNW_004936592:1,707,693...1,730,617 		JBrowse link
G Qdpr quinoid dihydropteridine reductase ISO RGD PMID:710385 RGD:5128606 NCBI chrNW_004936477:10,687,328...10,708,015
Ensembl chrNW_004936477:10,687,276...10,708,031 		JBrowse link
G Rara retinoic acid receptor alpha ISO RGD PMID:15388488 RGD:2314298 NCBI chrNW_004936490:15,376,217...15,420,638
Ensembl chrNW_004936490:15,376,205...15,421,611 		JBrowse link
G Rb1cc1 RB1 inducible coiled-coil 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17015619) Ensembl
MGI		 PMID:17015619 GO_REF:0000107 NCBI chrNW_004936590:260,685...335,143
Ensembl chrNW_004936590:260,685...334,721 		JBrowse link
G Rcbtb2 RCC1 and BTB domain containing protein 2 acts_upstream_of_or_within ISO (PMID:26291700) MGI PMID:26291700 NCBI chrNW_004936565:1,750,565...1,789,779
Ensembl chrNW_004936565:1,750,105...1,789,737 		JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:3,800,142...3,810,583
Ensembl chrNW_004936599:3,801,636...3,809,813 		JBrowse link
G Rgn regucalcin ISO RGD PMID:8794449 PMID:9546611 RGD:9590173 RGD:9590212 NCBI chrNW_004936502:12,872,938...12,891,270
Ensembl chrNW_004936502:12,872,824...12,891,506 		JBrowse link
G Rhbdd3 rhomboid domain containing 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23610400) Ensembl
MGI		 PMID:23610400 GO_REF:0000107 NCBI chrNW_004936657:3,290,684...3,296,352
Ensembl chrNW_004936657:3,290,574...3,296,705 		JBrowse link
G Rpgrip1l RPGRIP1 like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17558409) Ensembl
MGI		 PMID:17558409 GO_REF:0000107 NCBI chrNW_004936475:6,219,187...6,321,612
Ensembl chrNW_004936475:6,215,475...6,321,618 		JBrowse link
G Rxra retinoid X receptor alpha ISO RGD PMID:14729401 RGD:1643117 NCBI chrNW_004936669:2,735,111...2,763,060
Ensembl chrNW_004936669:2,738,448...2,763,070 		JBrowse link
G Sec63 SEC63 homolog, protein translocation regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21685914) Ensembl
MGI		 PMID:21685914 GO_REF:0000107 NCBI chrNW_004936564:4,182,330...4,221,927
Ensembl chrNW_004936564:4,179,584...4,221,904 		JBrowse link
G Slc25a4 solute carrier family 25 member 4 ISO RGD PMID:9468308 RGD:9681468 NCBI chrNW_004936554:4,130,461...4,135,046
Ensembl chrNW_004936554:4,130,459...4,135,044 		JBrowse link
G Slco1b3 solute carrier organic anion transporter family member 1B3 ISO RGD PMID:15288467 RGD:2303131 NCBI chrNW_004936548:5,593,908...5,682,187 JBrowse link
G Slco2b1 solute carrier organic anion transporter family member 2B1 ISO RGD PMID:15345472 RGD:2316987 NCBI chrNW_004936498:3,998,537...4,047,436
Ensembl chrNW_004936498:3,998,474...4,047,239 		JBrowse link
G Smad3 SMAD family member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15183723) Ensembl
MGI		 PMID:15183723 GO_REF:0000107 NCBI chrNW_004936471:27,080,662...27,185,861
Ensembl chrNW_004936471:27,080,575...27,189,793 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO (PMID:16287714) MGI PMID:16287714 NCBI chrNW_004936659:1,152,846...1,246,718
Ensembl chrNW_004936659:1,169,792...1,249,213 		JBrowse link
G Sod2 superoxide dismutase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17367743) Ensembl
MGI		 PMID:17367743 GO_REF:0000107 NCBI chrNW_004936489:11,178,338...11,191,601
Ensembl chrNW_004936489:11,178,015...11,191,781 		JBrowse link
G Sp1 Sp1 transcription factor acts_upstream_of_or_within ISO (PMID:17584888) MGI PMID:17584888 NCBI chrNW_004936512:10,655,116...10,693,025
Ensembl chrNW_004936512:10,655,349...10,693,042 		JBrowse link
G Sp3 Sp3 transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17584888) Ensembl
MGI		 PMID:17584888 GO_REF:0000107 NCBI chrNW_004936509:3,740,393...3,782,873
Ensembl chrNW_004936509:3,741,836...3,793,136 		JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 ISO RGD PMID:8770891 RGD:4892048 NCBI chrNW_004936634:758,231...798,809 JBrowse link
G Srsf5 serine and arginine rich splicing factor 5 ISO RGD PMID:9199345 RGD:11039429 NCBI chrNW_004936495:12,952,610...12,957,640
Ensembl chrNW_004936495:12,952,646...12,960,681 		JBrowse link
G Taf10 TATA-box binding protein associated factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18722179) Ensembl
MGI		 PMID:18722179 GO_REF:0000107 NCBI chrNW_004936842:667,960...669,367
Ensembl chrNW_004936842:667,936...669,441 		JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 involved_in ISO (MGI:2663364|PMID:12773577) BHF-UCL PMID:12773577 MGI:2663364 NCBI chrNW_004936537:7,154,125...7,340,218
Ensembl chrNW_004936537:7,175,516...7,336,895 		JBrowse link
G Thra thyroid hormone receptor alpha ISO RGD PMID:17496154 RGD:2314319 NCBI chrNW_004936490:15,188,341...15,206,032
Ensembl chrNW_004936490:15,193,150...15,206,784 		JBrowse link
G Tk1 thymidine kinase 1 ISO RGD PMID:995499 RGD:2317236 NCBI chrNW_004936594:2,784,891...2,794,693
Ensembl chrNW_004936594:2,784,226...2,794,830 		JBrowse link
G Upb1 beta-ureidopropionase 1 ISO RGD PMID:6870258 RGD:2317093 NCBI chrNW_004936619:668,380...713,720
Ensembl chrNW_004936619:668,351...696,306 		JBrowse link
G Upf2 UPF2 regulator of nonsense mediated mRNA decay involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20657840) Ensembl
MGI		 PMID:20657840 GO_REF:0000107 NCBI chrNW_004936484:3,266,196...3,381,511
Ensembl chrNW_004936484:3,266,190...3,381,526 		JBrowse link
G Urod uroporphyrinogen decarboxylase ISO RGD PMID:6219675 RGD:4145103 NCBI chrNW_004936474:26,207,169...26,210,599
Ensembl chrNW_004936474:26,207,169...26,210,623 		JBrowse link
G Vwf von Willebrand factor acts_upstream_of_or_within ISO (PMID:7854452) MGI PMID:7854452 NCBI chrNW_004936709:1,578,137...1,741,877
Ensembl chrNW_004936709:1,579,096...1,741,754 		JBrowse link
G Wnt4 Wnt family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:7,623,462...7,635,416
Ensembl chrNW_004936474:7,623,463...7,635,664 		JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO (MGI:1352298|PMID:10652269) UniProt PMID:10652269 MGI:1352298 NCBI chrNW_004936657:2,891,171...2,895,409
Ensembl chrNW_004936657:2,891,907...2,896,174 		JBrowse link
G Zfyve9 zinc finger FYVE-type containing 9 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936522:8,632,626...8,808,008
Ensembl chrNW_004936522:8,633,043...8,808,008 		JBrowse link
G Zmpste24 zinc metallopeptidase STE24 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23117660) Ensembl
MGI		 PMID:23117660 GO_REF:0000107 NCBI chrNW_004936474:22,035,059...22,077,846
Ensembl chrNW_004936474:22,034,801...22,077,986 		JBrowse link
determination of liver left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc39 coiled-coil domain 39 molecular ruler complex subunit involved_in ISO (PMID:22693285) BHF-UCL PMID:22693285 NCBI chrNW_004936566:2,610,756...2,663,657 JBrowse link
G Ccdc40 coiled-coil domain 40 molecular ruler complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:4,075,105...4,124,850
Ensembl chrNW_004936594:4,089,214...4,124,153 		JBrowse link
G Dnaaf1 dynein axonemal assembly factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:3,656,331...3,674,907
Ensembl chrNW_004936641:3,657,058...3,673,729 		JBrowse link
G Nphp3 nephrocystin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:6,013,321...6,048,249
Ensembl chrNW_004936529:6,009,301...6,049,447 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:21719175) BHF-UCL PMID:21719175 NCBI chrNW_004936905:76,781...128,995 JBrowse link
G Zic3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936513:9,780,895...9,792,865
Ensembl chrNW_004936513:9,786,709...9,793,077 		JBrowse link
hepatoblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ggt1 gamma-glutamyltransferase 1 ISO RGD PMID:10934156 RGD:14701049 NCBI chrNW_004936619:762,278...791,610 JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO (PMID:17580084) MGI PMID:17580084 NCBI chrNW_004936601:2,137,490...2,143,797
Ensembl chrNW_004936601:2,136,873...2,143,857 		JBrowse link
G Hnf1b HNF1 homeobox B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18635606) Ensembl
MGI		 PMID:18635606 GO_REF:0000107 NCBI chrNW_004936490:649,551...702,448
Ensembl chrNW_004936490:649,546...702,672 		JBrowse link
G Tbx3 T-box transcription factor 3 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:18356246) Ensembl
MGI		 PMID:18356246 GO_REF:0000107 NCBI chrNW_004936558:7,230,361...7,243,651
Ensembl chrNW_004936558:7,230,668...7,244,361 		JBrowse link
hepatocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa1 annexin A1 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:11668598 GO_REF:0000118 RGD:2306909 NCBI chrNW_004936503:9,124,314...9,142,372
Ensembl chrNW_004936503:9,124,264...9,142,413 		JBrowse link
G Cps1 carbamoyl-phosphate synthase 1 ISO RGD PMID:12939595 RGD:4144098 NCBI chrNW_004936586:5,739,038...5,850,317
Ensembl chrNW_004936586:5,739,337...5,850,312 		JBrowse link
G E2f7 E2F transcription factor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936568:5,206,135...5,245,324
Ensembl chrNW_004936568:5,206,135...5,244,450 		JBrowse link
G E2f8 E2F transcription factor 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936654:322,863...339,365
Ensembl chrNW_004936654:322,863...338,699 		JBrowse link
G Foxh1 forkhead box H1 ISO RGD PMID:22715131 RGD:155791677 NCBI chrNW_004936470:7,789,486...7,791,067
Ensembl chrNW_004936470:7,789,541...7,791,039 		JBrowse link
G Frzb frizzled related protein involved_in
acts_upstream_of		 IEA
ISO		 (PMID:19562671) Ensembl
MGI		 PMID:19562671 GO_REF:0000107 NCBI chrNW_004936509:11,440,414...11,471,042
Ensembl chrNW_004936509:11,440,148...11,470,967 		JBrowse link
G Ggt1 gamma-glutamyltransferase 1 ISO RGD PMID:10934156 RGD:14701049 NCBI chrNW_004936619:762,278...791,610 JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO (PMID:11027604) MGI PMID:11027604 NCBI chrNW_004936601:2,137,490...2,143,797
Ensembl chrNW_004936601:2,136,873...2,143,857 		JBrowse link
G Hnf1b HNF1 homeobox B ISO RGD PMID:18286537 RGD:2312718 NCBI chrNW_004936490:649,551...702,448
Ensembl chrNW_004936490:649,546...702,672 		JBrowse link
G Hnf4a hepatocyte nuclear factor 4 alpha ISO RGD PMID:19621519 RGD:12904750 NCBI chrNW_004936530:2,401,053...2,425,989
Ensembl chrNW_004936530:2,401,043...2,454,466 		JBrowse link
G Itga2 integrin subunit alpha 2 ISO RGD PMID:16458388 RGD:2307397 NCBI chrNW_004936480:14,320,292...14,417,828
Ensembl chrNW_004936480:14,320,692...14,417,786 		JBrowse link
G Krt18 keratin 18 ISO RGD PMID:24340101 PMID:28941653 RGD:27226712 RGD:27226713 NCBI chrNW_004936512:10,290,706...10,294,647
Ensembl chrNW_004936512:10,290,690...10,294,651 		JBrowse link
G LOC101969148 cytochrome P450 1A1 ISO RGD PMID:17574236 RGD:2306655 NCBI chrNW_004936471:33,682,730...33,688,332
Ensembl chrNW_004936471:33,682,730...33,688,332 		JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936530:361,872...367,005
Ensembl chrNW_004936530:361,872...367,005 		JBrowse link
G Pck2 phosphoenolpyruvate carboxykinase 2, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936722:428,473...450,452
Ensembl chrNW_004936722:428,307...437,328 		JBrowse link
G Prox1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936628:4,185,712...4,240,680
Ensembl chrNW_004936628:4,185,706...4,238,451 		JBrowse link
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16138077) Ensembl
MGI		 PMID:16138077 GO_REF:0000107 NCBI chrNW_004936619:1,276,239...1,308,945
Ensembl chrNW_004936619:1,275,362...1,308,913 		JBrowse link
G Taf10 TATA-box binding protein associated factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18722179) Ensembl
MGI		 PMID:18722179 GO_REF:0000107 NCBI chrNW_004936842:667,960...669,367
Ensembl chrNW_004936842:667,936...669,441 		JBrowse link
G Wnt1 Wnt family member 1 ISO RGD PMID:20413689 RGD:2326223 NCBI chrNW_004936512:6,781,001...6,785,358
Ensembl chrNW_004936512:6,780,882...6,785,358 		JBrowse link
hepatocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgl1 fibrinogen like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936614:431,537...452,174
Ensembl chrNW_004936614:431,631...450,034 		JBrowse link
G Il6 interleukin 6 involved_in ISO (MGI:84432|PMID:8910279) UniProt PMID:8910279 MGI:84432 NCBI chrNW_004936549:7,015,595...7,016,246 JBrowse link
G LOC101965998 notch receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25446530) Ensembl
MGI		 PMID:25446530 GO_REF:0000107 NCBI chrNW_004936872:454,273...539,544
Ensembl chrNW_004936872:390,852...536,321 		JBrowse link
G Mki67 marker of proliferation Ki-67 acts_upstream_of_or_within ISO (PMID:25446530) MGI PMID:25446530 NCBI chrNW_004936486:15,561,327...15,587,109 JBrowse link
G Nr1h4 nuclear receptor subfamily 1 group H member 4 ISO RGD PMID:29138817 RGD:15042871 NCBI chrNW_004936492:13,315,265...13,365,186
Ensembl chrNW_004936492:13,315,265...13,374,034 		JBrowse link
G Prox1 prospero homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10888866) Ensembl
MGI		 PMID:10888866 GO_REF:0000107 NCBI chrNW_004936628:4,185,712...4,240,680
Ensembl chrNW_004936628:4,185,706...4,238,451 		JBrowse link
G Rps6ka1 ribosomal protein S6 kinase A1 involved_in ISO (MGI:3778721|PMID:10635333) UniProt PMID:10635333 MGI:3778721 NCBI chrNW_004936474:10,996,867...11,030,504
Ensembl chrNW_004936474:10,996,813...11,030,557 		JBrowse link
G Tgfa transforming growth factor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:14,659,089...14,758,614
Ensembl chrNW_004936491:14,657,100...14,758,848 		JBrowse link
intrahepatic bile duct development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gak cyclin G associated kinase acts_upstream_of_or_within ISO (PMID:18434600) MGI PMID:18434600 NCBI chrNW_004936477:22,254,109...22,300,827
Ensembl chrNW_004936477:22,253,471...22,300,932 		JBrowse link
G LOC101965998 notch receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25446530) Ensembl
MGI		 PMID:25446530 GO_REF:0000107 NCBI chrNW_004936872:454,273...539,544
Ensembl chrNW_004936872:390,852...536,321 		JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19403103) Ensembl
MGI		 PMID:19403103 GO_REF:0000107 NCBI chrNW_004936655:1,849,044...1,852,648
Ensembl chrNW_004936655:1,847,272...1,852,705 		JBrowse link
liver morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cul3 cullin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17339333) Ensembl
MGI		 PMID:17339333 GO_REF:0000107 NCBI chrNW_004936569:6,067,230...6,131,467
Ensembl chrNW_004936569:6,065,367...6,132,316 		JBrowse link
G LOC101960702 lysosomal acid lipase/cholesteryl ester hydrolase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936601:4,975,296...5,008,938
Ensembl chrNW_004936601:4,975,211...5,008,962 		JBrowse link
G LOC101965998 notch receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25446530) Ensembl
MGI		 PMID:25446530 GO_REF:0000107 NCBI chrNW_004936872:454,273...539,544
Ensembl chrNW_004936872:390,852...536,321 		JBrowse link
G Tet2 tet methylcytosine dioxygenase 2 acts_upstream_of_or_within ISO (PMID:21803851) MGI PMID:21803851 NCBI chrNW_004936752:440,137...577,339
Ensembl chrNW_004936752:440,136...577,615 		JBrowse link
liver regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrb2 adrenoceptor beta 2 ISO RGD PMID:8855951 RGD:8548508 NCBI chrNW_004936504:5,985,407...5,987,453
Ensembl chrNW_004936504:5,985,960...5,987,210 		JBrowse link
G Afp alpha fetoprotein ISO RGD PMID:2460696 RGD:126848734 NCBI chrNW_004936598:2,058,474...2,077,711
Ensembl chrNW_004936598:2,058,117...2,077,728 		JBrowse link
G Alas2 5'-aminolevulinate synthase 2 ISO RGD PMID:6895999 RGD:11035238 NCBI chrNW_004936751:1,818,255...1,841,028
Ensembl chrNW_004936751:1,814,446...1,841,531 		JBrowse link
G Angpt1 angiopoietin 1 ISO RGD PMID:11549276 RGD:704403 NCBI chrNW_004936470:37,105,469...37,328,183
Ensembl chrNW_004936470:37,105,466...37,328,190 		JBrowse link
G Atp2a3 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 ISO RGD PMID:11032760 RGD:13782137 NCBI chrNW_004936677:552,066...585,093
Ensembl chrNW_004936677:551,933...585,114 		JBrowse link
G Aurka aurora kinase A acts_upstream_of_or_within ISO (PMID:19435814) MGI PMID:19435814 NCBI chrNW_004936875:295,238...310,457 JBrowse link
G Bcl2 BCL2 apoptosis regulator ISO RGD PMID:21503946 RGD:11531107 NCBI chrNW_004936497:2,209,136...2,373,580
Ensembl chrNW_004936497:2,210,334...2,210,921 		JBrowse link
G Ccnd1 cyclin D1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23740243) Ensembl
MGI		 PMID:23740243 GO_REF:0000107 Ensembl chrNW_004936599:973,838...983,316 JBrowse link
G Cftr CF transmembrane conductance regulator ISO RGD PMID:1378998 RGD:11567227 NCBI chrNW_004936589:1,565,933...1,719,208 JBrowse link
G Cldn1 claudin 1 ISO RGD PMID:15826721 RGD:11344894 NCBI chrNW_004936578:98,489...113,125
Ensembl chrNW_004936578:98,273...113,153 		JBrowse link
G Cpb2 carboxypeptidase B2 ISO RGD PMID:19386599 RGD:7243112 NCBI chrNW_004936857:577,067...609,855
Ensembl chrNW_004936857:577,585...626,267 		JBrowse link
G Cpt1a carnitine palmitoyltransferase 1A ISO RGD PMID:31953200 RGD:25823179 NCBI chrNW_004936599:1,491,934...1,535,101
Ensembl chrNW_004936599:1,482,172...1,535,119 		JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 ISO RGD PMID:8573159 RGD:11565141 NCBI chrNW_004936485:17,966,993...18,021,191 JBrowse link
G Csnk2a2 casein kinase 2 alpha 2 ISO RGD PMID:8573159 RGD:11565141 NCBI chrNW_004936475:10,030,408...10,073,576
Ensembl chrNW_004936475:10,033,717...10,075,511 		JBrowse link
G Csnk2b casein kinase 2 beta ISO RGD PMID:8573159 RGD:11565141 NCBI chrNW_004936727:1,857,596...1,862,551
Ensembl chrNW_004936727:1,857,596...1,862,002 		JBrowse link
G Egfr epidermal growth factor receptor ISO RGD PMID:2401457 PMID:20395437 RGD:10395295 RGD:38599218 NCBI chrNW_004936678:365,005...560,546
Ensembl chrNW_004936678:365,834...436,528 		JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit acts_upstream_of_or_within ISO (PMID:25477280) MGI PMID:25477280 NCBI chrNW_004936490:17,430,383...17,465,889
Ensembl chrNW_004936490:17,428,677...17,465,877 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25477280) Ensembl
MGI		 PMID:25477280 GO_REF:0000107 NCBI chrNW_004936527:5,024,077...5,069,152
Ensembl chrNW_004936527:5,024,068...5,063,939 		JBrowse link
G Fas Fas cell surface death receptor ISO RGD PMID:10632538 RGD:8662889 NCBI chrNW_004936735:209,369...234,582 JBrowse link
G Fga fibrinogen alpha chain ISO RGD PMID:3817019 RGD:728788 NCBI chrNW_004936576:1,322,406...1,329,743 JBrowse link
G Flt1 fms related receptor tyrosine kinase 1 ISO RGD PMID:16162160 RGD:10402121 NCBI chrNW_004936472:23,442,946...23,617,523
Ensembl chrNW_004936472:23,440,088...23,617,041 		JBrowse link
G Gfer growth factor, augmenter of liver regeneration ISO RGD PMID:24880092 RGD:9685725 NCBI chrNW_004936694:2,051,362...2,053,812
Ensembl chrNW_004936694:2,051,325...2,053,818 		JBrowse link
G Ggt1 gamma-glutamyltransferase 1 ISO RGD PMID:10934156 RGD:14701049 NCBI chrNW_004936619:762,278...791,610 JBrowse link
G Gli1 GLI family zinc finger 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23740243) RGD
MGI
Ensembl		 PMID:22024090 PMID:22790641 PMID:23740243 GO_REF:0000107 RGD:12832760 RGD:12911223 NCBI chrNW_004936646:1,622,308...1,629,787
Ensembl chrNW_004936646:1,622,308...1,629,779 		JBrowse link
G Gli3 GLI family zinc finger 3 ISO RGD PMID:22024090 RGD:12911223 NCBI chrNW_004936478:17,129,922...17,403,630
Ensembl chrNW_004936478:17,126,911...17,403,011 		JBrowse link
G Gucd1 guanylyl cyclase domain containing 1 ISO RGD PMID:24743017 RGD:151665336 NCBI chrNW_004936619:709,535...728,849
Ensembl chrNW_004936619:715,875...728,916 		JBrowse link
G Hamp hepcidin antimicrobial peptide ISO RGD PMID:22364558 RGD:8694419 NCBI chrNW_004936570:1,009,344...1,010,654
Ensembl chrNW_004936570:1,009,312...1,010,686 		JBrowse link
G Hfe homeostatic iron regulator ISO RGD PMID:22364558 RGD:8694419 NCBI chrNW_004936671:1,940,079...1,947,574
Ensembl chrNW_004936671:1,940,101...1,947,580 		JBrowse link
G Hmox1 heme oxygenase 1 ISO RGD PMID:24815159 RGD:10755743 NCBI chrNW_004936492:5,042,353...5,049,216
Ensembl chrNW_004936492:5,042,330...5,049,311 		JBrowse link
G Hsd3b7 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 ISO RGD PMID:16081591 RGD:1599972 NCBI chrNW_004936501:13,363,630...13,367,553
Ensembl chrNW_004936501:13,363,576...13,367,553 		JBrowse link
G Ihh Indian hedgehog signaling molecule ISO RGD PMID:22024090 RGD:12911223 NCBI chrNW_004936569:1,474,693...1,480,562
Ensembl chrNW_004936569:1,474,665...1,480,568 		JBrowse link
G Il10 interleukin 10 ISO RGD PMID:11813605 RGD:11049526 NCBI chrNW_004936557:5,834,874...5,838,502
Ensembl chrNW_004936557:5,834,874...5,838,502 		JBrowse link
G Il18 interleukin 18 ISO RGD PMID:24412291 RGD:14696652 NCBI chrNW_004936612:2,306,963...2,325,086
Ensembl chrNW_004936612:2,306,875...2,325,189 		JBrowse link
G Il6 interleukin 6 involved_in ISO (MGI:84432|PMID:8910279) UniProt PMID:8910279 MGI:84432 NCBI chrNW_004936549:7,015,595...7,016,246 JBrowse link
G Insr insulin receptor ISO RGD PMID:23633480 RGD:9685423 NCBI chrNW_004936588:4,345,306...4,453,380
Ensembl chrNW_004936588:4,345,306...4,453,668 		JBrowse link
G Itpr1 inositol 1,4,5-trisphosphate receptor type 1 ISO RGD PMID:24814243 RGD:13793384 NCBI chrNW_004936577:3,896,455...4,198,396
Ensembl chrNW_004936577:3,896,390...4,198,411 		JBrowse link
G Klkb1 kallikrein B1 ISO RGD PMID:9869390 RGD:7297052 NCBI chrNW_004936554:3,227,395...3,256,710
Ensembl chrNW_004936554:3,228,735...3,256,710 		JBrowse link
G LOC101963795 60S ribosomal protein L30 ISO RGD PMID:6121318 RGD:11038709 NCBI chrNW_004936493:7,942,669...7,943,133 JBrowse link
G LOC101973720 rap guanine nucleotide exchange factor 3 ISO RGD PMID:22227930 RGD:9850085 NCBI chrNW_004936512:5,636,197...5,659,606
Ensembl chrNW_004936512:5,636,758...5,659,300
Ensembl chrNW_004936512:5,636,758...5,659,300 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:3335218 RGD:10059623 NCBI chrNW_004936470:20,480,844...20,485,955
Ensembl chrNW_004936470:20,480,829...20,485,965 		JBrowse link
G Nfkbia NFKB inhibitor alpha ISO RGD PMID:24446557 RGD:150429839 NCBI chrNW_004936494:9,537,793...9,541,187
Ensembl chrNW_004936494:9,537,008...9,541,612 		JBrowse link
G Npm1 nucleophosmin 1 ISO RGD PMID:14635188 RGD:11534994 NCBI chrNW_004936609:3,712,628...3,725,635 JBrowse link
G Nr1h4 nuclear receptor subfamily 1 group H member 4 ISO RGD PMID:29138817 RGD:15042871 NCBI chrNW_004936492:13,315,265...13,365,186
Ensembl chrNW_004936492:13,315,265...13,374,034 		JBrowse link
G Pcna proliferating cell nuclear antigen ISO RGD PMID:7906221 RGD:10448980 NCBI chrNW_004936485:13,766,221...13,771,215 JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 ISO RGD PMID:191106 RGD:11554175 NCBI chrNW_004936491:1,989,429...2,032,430
Ensembl chrNW_004936491:1,987,097...2,032,430 		JBrowse link
G Pou2f1 POU class 2 homeobox 1 ISO RGD PMID:1841628 RGD:9743904 NCBI chrNW_004936481:18,607,212...18,679,828
Ensembl chrNW_004936481:18,617,572...18,678,183 		JBrowse link
G Prmt1 protein arginine methyltransferase 1 ISO RGD PMID:15837430 RGD:2299961 NCBI chrNW_004936664:3,492,032...3,502,738
Ensembl chrNW_004936664:3,491,920...3,504,667 		JBrowse link
G Prmt5 protein arginine methyltransferase 5 ISO RGD PMID:15837430 RGD:2299961 NCBI chrNW_004936722:1,379,515...1,388,538
Ensembl chrNW_004936722:1,379,515...1,388,546 		JBrowse link
G Ptch1 patched 1 ISO RGD PMID:22024090 RGD:12911223 NCBI chrNW_004936626:4,241,993...4,301,919
Ensembl chrNW_004936626:4,241,908...4,309,476 		JBrowse link
G Ptpn3 protein tyrosine phosphatase non-receptor type 3 ISO RGD PMID:7591957 RGD:1599982 NCBI chrNW_004936559:3,436,114...3,547,316
Ensembl chrNW_004936559:3,436,651...3,547,275 		JBrowse link
G Rap1a RAP1A, member of RAS oncogene family ISO RGD PMID:9015365 RGD:10003155 NCBI chrNW_004936690:275,840...363,752
Ensembl chrNW_004936690:315,752...366,413 		JBrowse link
G Reg1a regenerating family member 1 alpha ISO RGD PMID:19284990 RGD:10044030 NCBI chrNW_004936556:4,873,331...4,875,608
Ensembl chrNW_004936556:4,873,331...4,875,608 		JBrowse link
G Rgn regucalcin ISO RGD PMID:7759556 RGD:9590197 NCBI chrNW_004936502:12,872,938...12,891,270
Ensembl chrNW_004936502:12,872,824...12,891,506 		JBrowse link
G Rpl10 ribosomal protein L10 ISO RGD PMID:6121318 RGD:11038709 NCBI chrNW_004936809:1,146,994...1,149,573
Ensembl chrNW_004936809:1,146,809...1,149,618 		JBrowse link
G Rpl13 ribosomal protein L13 ISO RGD PMID:6121318 RGD:11038709 NCBI chrNW_004936641:437,684...441,257
Ensembl chrNW_004936641:437,731...440,999 		JBrowse link
G Rpl18 ribosomal protein L18 ISO RGD PMID:6121318 RGD:11038709 NCBI chrNW_004936664:2,665,084...2,668,706 JBrowse link
G Rpl19 ribosomal protein L19 ISO RGD PMID:6121318 RGD:11038709 NCBI chrNW_004936490:14,471,200...14,476,206
Ensembl chrNW_004936490:14,471,025...14,476,541 		JBrowse link
G Rpl32 ribosomal protein L32 ISO RGD PMID:6121318 RGD:11038709 NCBI chrNW_004936602:982,633...986,458
Ensembl chrNW_004936602:982,092...986,567 		JBrowse link
G Rpl7 ribosomal protein L7 ISO RGD PMID:6121318 RGD:11038709 NCBI chrNW_004936648:2,055,396...2,058,664
Ensembl chrNW_004936648:2,055,396...2,057,395 		JBrowse link
G Rps15 ribosomal protein S15 ISO RGD PMID:2829897 RGD:11040696 NCBI chrNW_004936588:762,153...763,405
Ensembl chrNW_004936588:761,924...764,742 		JBrowse link
G Rps16 ribosomal protein S16 ISO RGD PMID:6121318 RGD:11038709 NCBI chrNW_004936661:2,271,747...2,274,769
Ensembl chrNW_004936661:2,271,396...2,274,965 		JBrowse link
G Rps24 ribosomal protein S24 ISO RGD PMID:7612009 RGD:11041663 NCBI chrNW_004936521:1,562,013...1,568,280
Ensembl chrNW_004936521:1,561,992...1,568,280 		JBrowse link
G Serpina10 serpin family A member 10 ISO RGD PMID:8670294 RGD:729731 NCBI chrNW_004936733:2,121,875...2,129,988 JBrowse link
G Shh sonic hedgehog signaling molecule ISO RGD PMID:22790641 RGD:12832760 NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599 		JBrowse link
G Slc7a5 solute carrier family 7 member 5 ISO RGD PMID:9882595 RGD:151357002 NCBI chrNW_004936641:1,513,110...1,538,955 JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 ISO RGD PMID:23633480 RGD:9685423 NCBI chrNW_004936490:5,055,258...5,059,118
Ensembl chrNW_004936490:5,055,253...5,059,116 		JBrowse link
G Srsf5 serine and arginine rich splicing factor 5 ISO RGD PMID:7686911 RGD:729792 NCBI chrNW_004936495:12,952,610...12,957,640
Ensembl chrNW_004936495:12,952,646...12,960,681 		JBrowse link
G Sulf2 sulfatase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23740243) Ensembl
MGI		 PMID:23740243 GO_REF:0000107 NCBI chrNW_004936514:5,819,375...5,899,324
Ensembl chrNW_004936514:5,819,400...5,899,316 		JBrowse link
G Tgfb1 transforming growth factor beta 1 ISO RGD PMID:25862490 RGD:11073669 NCBI chrNW_004936661:3,742,080...3,758,266
Ensembl chrNW_004936661:3,742,066...3,758,272 		JBrowse link
G Tnf tumor necrosis factor ISO RGD PMID:9178702 RGD:14995465 NCBI chrNW_004936727:1,936,066...1,937,766
Ensembl chrNW_004936727:1,936,066...1,937,766 		JBrowse link
G Tyms thymidylate synthetase ISO RGD PMID:2707640 RGD:2317422 NCBI chrNW_004936550:33,797...42,233
Ensembl chrNW_004936550:34,048...41,840 		JBrowse link
G Ucp2 uncoupling protein 2 ISO RGD PMID:19104935 RGD:7204431 NCBI chrNW_004936498:3,059,700...3,066,112
Ensembl chrNW_004936498:3,059,297...3,066,197 		JBrowse link
G Vtn vitronectin ISO RGD PMID:10988248 RGD:10003090 NCBI chrNW_004936538:4,522,275...4,525,245
Ensembl chrNW_004936538:4,522,074...4,525,336 		JBrowse link
G Vwf von Willebrand factor ISO RGD PMID:12217600 RGD:727737 NCBI chrNW_004936709:1,578,137...1,741,877
Ensembl chrNW_004936709:1,579,096...1,741,754 		JBrowse link
G Wdr35 WD repeat domain 35 ISO RGD PMID:18472094 RGD:11553927 NCBI chrNW_004936493:11,374,681...11,435,792
Ensembl chrNW_004936493:11,374,671...11,436,233 		JBrowse link
negative regulation of hepatocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Frzb frizzled related protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19562671) Ensembl
MGI		 PMID:19562671 GO_REF:0000107 NCBI chrNW_004936509:11,440,414...11,471,042
Ensembl chrNW_004936509:11,440,148...11,470,967 		JBrowse link
negative regulation of hepatocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpb2 carboxypeptidase B2 ISO RGD PMID:19386599 RGD:7243112 NCBI chrNW_004936857:577,067...609,855
Ensembl chrNW_004936857:577,585...626,267 		JBrowse link
G Lims1 LIM zinc finger domain containing 1 acts_upstream_of_or_within ISO (PMID:24058607) MGI PMID:24058607 NCBI chrNW_004936829:187,234...240,213 JBrowse link
G Lims2 LIM zinc finger domain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24058607) Ensembl
MGI		 PMID:24058607 GO_REF:0000107 NCBI chrNW_004936469:43,628,280...43,665,145
Ensembl chrNW_004936469:43,634,074...43,665,175 		JBrowse link
G LOC101954488 CEA cell adhesion molecule 1 involved_in ISO PMID:15467833
(MGI:3057041|PMID:15467833)		 UniProt PMID:15467833 MGI:3057041 RGD:11059592 NCBI chrNW_004936706:37,480...53,306 JBrowse link
G Smo smoothened, frizzled class receptor ISO RGD PMID:22994359 RGD:150521663 NCBI chrNW_004936579:5,893,064...5,917,021
Ensembl chrNW_004936579:5,892,542...5,917,281 		JBrowse link
positive regulation of hepatocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 ISO RGD PMID:19229878 RGD:8885195 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468 		JBrowse link
G Foxa3 forkhead box A3 ISO RGD PMID:9878541 RGD:2315086 NCBI chrNW_004936706:2,196,530...2,202,924
Ensembl chrNW_004936706:2,196,468...2,203,113 		JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:15,533,264...15,534,576
Ensembl chrNW_004936483:15,533,522...15,534,576 		JBrowse link
positive regulation of hepatocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cflar CASP8 and FADD like apoptosis regulator ISO RGD PMID:16033771 RGD:11341689 NCBI chrNW_004936726:381,888...425,565
Ensembl chrNW_004936726:381,835...423,311 		JBrowse link
G Fgf1 fibroblast growth factor 1 involved_in ISO PMID:16756958 UniProt PMID:16756958 RGD:10047366 NCBI chrNW_004936504:11,590,687...11,684,410
Ensembl chrNW_004936504:11,590,637...11,685,194 		JBrowse link
G Fgf18 fibroblast growth factor 18 involved_in ISO PMID:16756958 UniProt PMID:16756958 RGD:10047366 NCBI chrNW_004936609:3,677,661...3,706,511
Ensembl chrNW_004936609:3,677,237...3,706,517 		JBrowse link
G Hpn hepsin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936570:1,170,951...1,186,501
Ensembl chrNW_004936570:1,170,943...1,186,500 		JBrowse link
G Il18 interleukin 18 ISO RGD PMID:24412291 RGD:14696652 NCBI chrNW_004936612:2,306,963...2,325,086
Ensembl chrNW_004936612:2,306,875...2,325,189 		JBrowse link
G Itpr1 inositol 1,4,5-trisphosphate receptor type 1 ISO RGD PMID:24814243 RGD:13793384 NCBI chrNW_004936577:3,896,455...4,198,396
Ensembl chrNW_004936577:3,896,390...4,198,411 		JBrowse link
G Mdk midkine involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936562:2,687,825...2,690,292
Ensembl chrNW_004936562:2,687,825...2,689,484 		JBrowse link
G Med1 mediator complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17438330) Ensembl
MGI		 PMID:17438330 GO_REF:0000107 NCBI chrNW_004936490:14,625,201...14,663,184
Ensembl chrNW_004936490:14,625,897...14,657,802 		JBrowse link
G Ptn pleiotrophin involved_in ISO
IEA		 RGD
Ensembl		 PMID:16226713 GO_REF:0000107 RGD:9834996 NCBI chrNW_004936592:1,706,979...1,806,345
Ensembl chrNW_004936592:1,707,693...1,730,617 		JBrowse link
G Rtn4 reticulon 4 involved_in ISO (MGI:6282933|PMID:23299899) UniProt PMID:23299899 MGI:6282933 NCBI chrNW_004936491:1,407,414...1,474,031
Ensembl chrNW_004936491:1,407,414...1,474,360 		JBrowse link
G Tnf tumor necrosis factor ISO with PCB 126 or TCDD RGD PMID:9111198 PMID:17557910 RGD:14995469 RGD:14995481 NCBI chrNW_004936727:1,936,066...1,937,766
Ensembl chrNW_004936727:1,936,066...1,937,766 		JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936560:5,124,955...5,138,988
Ensembl chrNW_004936560:5,128,843...5,138,345 		JBrowse link
G Wnt3a Wnt family member 3A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23740243) Ensembl
MGI		 PMID:23740243 GO_REF:0000107 NCBI chrNW_004936864:150,742...179,205
Ensembl chrNW_004936864:150,732...192,423 		JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO (MGI:1352298|PMID:10652269) UniProt PMID:10652269 MGI:1352298 NCBI chrNW_004936657:2,891,171...2,895,409
Ensembl chrNW_004936657:2,891,907...2,896,174 		JBrowse link
regulation of hepatocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli1 GLI family zinc finger 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23740243) Ensembl
MGI		 PMID:23740243 GO_REF:0000107 NCBI chrNW_004936646:1,622,308...1,629,787
Ensembl chrNW_004936646:1,622,308...1,629,779 		JBrowse link
G Ifng interferon gamma ISO RGD PMID:15799032 RGD:8142374 NCBI chrNW_004936545:6,139,130...6,144,543
Ensembl chrNW_004936545:6,139,116...6,148,452 		JBrowse link
G Plau plasminogen activator, urokinase ISO RGD PMID:17587687 RGD:6484147 NCBI chrNW_004936521:5,238,128...5,243,829
Ensembl chrNW_004936521:5,238,093...5,243,877 		JBrowse link
G Sulf2 sulfatase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23740243) Ensembl
MGI		 PMID:23740243 GO_REF:0000107 NCBI chrNW_004936514:5,819,375...5,899,324
Ensembl chrNW_004936514:5,819,400...5,899,316 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15975
    developmental process 6338
      anatomical structure development 5971
        animal organ development 3371
          gland development 621
            liver development 263
              determination of liver left/right asymmetry 6
              hepatoblast differentiation 4
              hepatocyte differentiation + 22
              intrahepatic bile duct development 3
              liver morphogenesis + 34
              liver regeneration 75
              liver trabecula formation 0
Path 2
Term Annotations click to browse term
  biological_process 15975
    developmental process 6338
      anatomical structure development 5971
        multicellular organism development 4846
          system development 4223
            hepaticobiliary system development 266
              liver development 263
                determination of liver left/right asymmetry 6
                hepatoblast differentiation 4
                hepatocyte differentiation + 22
                intrahepatic bile duct development 3
                liver morphogenesis + 34
                liver regeneration 75
                liver trabecula formation 0
paths to the root