D18Mgh10 Marker Search Result - Rat Genome Database
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Summary
References - curated
Strains and Sequence
Sequence
Strain Variation
Region
Nucleotide Sequences
Additional Information
External Database Links
General
Marker: D18Mgh10
Symbol:
D18Mgh10
Previously known as:
oxsts8938; CDXIA;
RGD ID:
34561
Expected Size:
136 (bp)
Position
Rat Assembly
Chr
Position (strand)
Source
JBrowse
GRCr8
18
56,744,223 - 56,744,359 (+)
Marker Load Pipeline
RH 3.4 Map
18
522.8
RGD
RH 3.4 Map
18
522.8
UniSTS
RH 2.0 Map
18
374.1
RGD
Cytogenetic Map
18
q12.1
UniSTS
Is Marker For:
Strains:
AVN/Orl
BBDP/Rhw
BBDR/Rhw
BC/CpbU
BDIX/Han
BDVII/Cub
BN/SsNHsd
BP/Cub
BUF/Pit
DA/PitN
DON/Melb
F344/Pit
IS/Kyo
LE/Mol
LEW/Pit
LH/Mav
MHS/Gib
MNRA/N
WN/N
WTC/Kyo
LOU/CHan
MNR/N
MR/Pit
ODU/N
WF/Pit
WIST/Nhg
SR/Jr
NP9
OKA/Wsl
OM/Ztm
P5C
PVG/Pit
SD/Rij
SHR/OlaHsd
SHRSP/Riv
WAG/RijKyo
GK/KyoSwe
M520/N
ACI/N
BN-
Lx
/Cub
GH/Omr
NEDH/K
SS/Jr
Genes:
Cdx1
Annotation
References - curated
1 to 6 of 6 rows
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#
Reference Title
Reference Citation
1.
Data downloaded from Wellcome Trust, University of Oxford
Data downloaded from Wellcome Trust, University of Oxford
2.
High-density rat radiation hybrid maps containing over 24,000 SSLPs, genes, and ESTs provide a direct link to the rat genome sequence.
Kwitek AE, etal., Genome Res. 2004 Apr;14(4):750-7
3.
UniSTS Pipeline
RGD automated pipelines
4.
RH Map Project
RH Map Project, Laboratory of Genetic Research Website, 1-JUL-99, Laboratory of Genetic Research, Medical College of Wisconsin, http://www.lgr.mcw.edu/LGR/
5.
A high density integrated genetic linkage and radiation hybrid map of the laboratory rat
Steen RG, Kwitek-Black AE, etal., Genome Research, 1999, 6:1-8
6.
Electronic Submission of SSLP Data Sets
Wilder R. Oct.2000. National Institute of Arthritis and Musculoskeletal and Skin Diseases, ARB Rat Genetic Database
1 to 6 of 6 rows
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Strains and Sequence
Sequence
Forward Primer
AACAGACATATGTATGTGTGCGC
Reverse Primer
CCCCATGTTCCTGTGACTG
Strain Variation
Strain, Expected Size(s)
ACI/N
138
AVN/Orl
146
BBDP/Rhw
138
BBDR/Rhw
138
BC/CpbU
138
BDIX/Han
138
BDVII/Cub
142
BN-
Lx
/Cub
138
BN/SsNHsd
138
BP/Cub
146
BUF/Pit
142
DA/PitN
138
DON/Melb
144
F344/Pit
142
GH/Omr
144
GK/KyoSwe
148
IS/Kyo
142
LE/Mol
138
LEW/Pit
138
LH/Mav
138
LOU/CHan
148
M520/N
138
MHS/Gib
138
MNR/N
148
MNRA/N
146
MR/Pit
148
NEDH/K
138
NP9
138
ODU/N
138
OKA/Wsl
146
OM/Ztm
138
P5C
138
PVG/Pit
152
SD/Rij
146
SHR/OlaHsd
146
SHRSP/Riv
146
SR/Jr
138
SS/Jr
138
WAG/RijKyo
138
WF/Pit
138
WIST/Nhg
148
WN/N
138
WTC/Kyo
144
Region
Nucleotide Sequences
1 to 1 of 1 rows
3
5
10
20
30
100
All Rows
GenBank Nucleotide
M91450
(Get FASTA)
NCBI Sequence Viewer
Search GEO for Microarray Profiles
1 to 1 of 1 rows
3
5
10
20
30
100
All Rows
Additional Information
External Database Links
1 to 1 of 1 rows
3
5
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All Rows
Database
Acc Id
Source(s)
NCBI Gene
364883
UniSTS
1 to 1 of 1 rows
3
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