Symbol:
Glis3
Name:
GLIS family zinc finger 3
RGD ID:
1565505
Description:
Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific; DNA-binding transcription repressor activity, RNA polymerase II-specific; and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II and transcription by RNA polymerase II. Predicted to act upstream of or within negative regulation of transcription by RNA polymerase II and positive regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Human ortholog(s) of this gene implicated in neonatal diabetes mellitus with congenital hypothyroidism. Orthologous to human GLIS3 (GLIS family zinc finger 3); INTERACTS WITH 1-naphthyl isothiocyanate; 6-propyl-2-thiouracil; alpha-Zearalanol.
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
hypothetical protein LOC680671; hypothetical protein LOC687614; LOC293882; LOC680671; NEWGENE_1565505; RGD1565505; similar to Zinc finger protein GLIS3 (GLI-similar 3); zinc finger protein GLIS3
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
GLIS3 (GLIS family zinc finger 3) HGNC
EggNOG, Ensembl, HomoloGene, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):
Glis3 (GLIS family zinc finger 3) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):
Glis3 (GLIS family zinc finger 3) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
GLIS3 (GLIS family zinc finger 3) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
GLIS3 (GLIS family zinc finger 3) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Glis3 (GLIS family zinc finger 3) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
GLIS3 (GLIS family zinc finger 3) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
GLIS3 (GLIS family zinc finger 3) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Glis3 (GLIS family zinc finger 3) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Alliance orthologs 3
Homo sapiens (human):
GLIS3 (GLIS family zinc finger 3)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Mus musculus (house mouse):
Glis3 (GLIS family zinc finger 3)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Danio rerio (zebrafish):
glis3 (GLIS family zinc finger 3)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OrthoFinder|OrthoInspector|PANTHER|SonicParanoid)
Drosophila melanogaster (fruit fly):
lmd
Alliance
DIOPT (Ensembl Compara|OrthoFinder|OrthoInspector)
Caenorhabditis elegans (roundworm):
ztf-14
Alliance
DIOPT (Ensembl Compara|InParanoid)
Xenopus tropicalis (tropical clawed frog):
glis3
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|SonicParanoid)
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 1 235,389,567 - 235,809,416 (-) NCBI GRCr8 mRatBN7.2 1 225,976,029 - 226,395,849 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 1 225,976,326 - 226,395,899 (-) Ensembl mRatBN7.2 Ensembl Rnor_6.0 1 246,380,816 - 246,564,385 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 1 246,380,889 - 246,785,360 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 1 253,622,178 - 254,039,761 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 1 231,881,983 - 232,292,288 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.4 1 232,291,906 - 232,306,168 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 1 223,130,737 - 223,177,831 (-) NCBI Celera Cytogenetic Map 1 q52 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Glis3 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 1 235,389,567 - 235,809,416 (-) NCBI GRCr8 mRatBN7.2 1 225,976,029 - 226,395,849 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 1 225,976,326 - 226,395,899 (-) Ensembl mRatBN7.2 Ensembl Rnor_6.0 1 246,380,816 - 246,564,385 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 1 246,380,889 - 246,785,360 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 1 253,622,178 - 254,039,761 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 1 231,881,983 - 232,292,288 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.4 1 232,291,906 - 232,306,168 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 1 223,130,737 - 223,177,831 (-) NCBI Celera Cytogenetic Map 1 q52 NCBI
GLIS3 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 9 3,824,127 - 4,490,465 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 9 3,824,127 - 4,348,392 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 9 3,824,127 - 4,300,068 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 9 3,814,128 - 4,290,035 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 9 3,817,676 - 4,142,183 NCBI Celera 9 3,742,092 - 4,217,855 (-) NCBI Celera Cytogenetic Map 9 p24.2 NCBI HuRef 9 3,779,368 - 4,255,081 (-) NCBI HuRef CHM1_1 9 3,824,581 - 4,300,359 (-) NCBI CHM1_1 T2T-CHM13v2.0 9 3,828,153 - 4,494,104 (-) NCBI T2T-CHM13v2.0
Glis3 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 19 28,236,251 - 28,657,684 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 19 28,236,251 - 28,657,477 (-) Ensembl GRCm39 Ensembl GRCm38 19 28,258,851 - 28,680,265 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 19 28,258,851 - 28,680,077 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 19 28,336,938 - 28,754,567 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 19 28,328,970 - 28,606,417 (-) NCBI MGSCv36 mm8 Celera 19 29,038,139 - 29,454,917 (-) NCBI Celera Cytogenetic Map 19 C1 NCBI cM Map 19 22.88 NCBI
Glis3 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955434 8,145,053 - 8,573,537 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955434 8,140,965 - 8,581,889 (-) NCBI ChiLan1.0 ChiLan1.0
GLIS3 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 11 120,266,621 - 120,758,261 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 9 120,272,559 - 120,764,199 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 9 3,633,416 - 4,125,420 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 9 3,823,567 - 4,314,140 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 9 3,827,712 - 4,300,658 (-) Ensembl panpan1.1 panPan2
GLIS3 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 1 92,278,521 - 92,824,303 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 1 92,282,164 - 92,734,468 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 1 92,750,809 - 93,296,691 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 1 92,826,097 - 93,377,711 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 1 92,829,077 - 93,272,131 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 1 92,463,220 - 93,009,736 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 1 92,186,805 - 92,732,955 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 1 92,951,661 - 93,498,143 (-) NCBI UU_Cfam_GSD_1.0
Glis3 Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024404947 139,885,832 - 140,319,439 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936503 853,436 - 1,287,160 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936503 989,817 - 1,283,781 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
GLIS3 Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 1 217,629,883 - 218,117,267 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 1 217,572,604 - 218,117,629 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 1 243,782,562 - 243,981,149 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
GLIS3
Glis3
.
Predicted Target Of
Count of predictions: 123 Count of miRNA genes: 102 Interacting mature miRNAs: 108 Transcripts: ENSRNOT00000019816, ENSRNOT00000073656 Prediction methods: Microtar, Miranda, Rnahybrid, Targetscan Result types: miRGate_prediction
8693637 Alc29 Alcohol consumption QTL 29 2.7 0.258 drinking behavior trait (VT:0001422) calculated ethanol drink intake rate (CMO:0001615) 1 207987464 234238494 Rat 1578778 Pur4 Proteinuria QTL 4 3.3 0.003 urine total protein amount (VT:0000032) urine total protein excretion rate (CMO:0000756) 1 150700247 252085048 Rat 1354646 Kidm18 Kidney mass QTL 18 5.7 kidney mass (VT:0002707) calculated kidney weight (CMO:0000160) 1 151162512 256448636 Rat 1357335 Bw39 Body weight QTL 39 3.3 body mass (VT:0001259) body weight (CMO:0000012) 1 197814409 242814409 Rat 2302375 Bw83 Body weight QTL 83 4.87 0.0002 body mass (VT:0001259) body weight (CMO:0000012) 1 197697768 242697768 Rat 1354652 Kidm20 Kidney mass QTL 20 4.3 kidney mass (VT:0002707) calculated kidney weight (CMO:0000160) 1 177227632 256448636 Rat 2293674 Bss39 Bone structure and strength QTL 39 7.1 0.0001 femur strength trait (VT:0010010) femur total energy absorbed before break (CMO:0001677) 1 201554356 246554356 Rat 2302378 Insul11 Insulin level QTL 11 3.25 blood insulin amount (VT:0001560) serum insulin level (CMO:0000358) 1 144267353 251128347 Rat 61455 Niddm7 Non-insulin dependent diabetes mellitus QTL 7 5.5 blood glucose amount (VT:0000188) plasma glucose level (CMO:0000042) 1 214537555 238757011 Rat 61327 Eae7 Experimental allergic encephalomyelitis QTL 7 5.6 body mass (VT:0001259) change in body weight (CMO:0002045) 1 216255568 260522016 Rat 1600392 Bw123 Body weight QTL 123 0.001 body mass (VT:0001259) body weight (CMO:0000012) 1 223201027 260522016 Rat 7794788 Mcs32 Mammary carcinoma susceptibility QTL 32 2.61 mammary gland integrity trait (VT:0010552) mammary tumor incidence/prevalence measurement (CMO:0000946) 1 115540693 238914717 Rat 1578763 Kidm29 Kidney mass QTL 29 3.3 0.0001 kidney mass (VT:0002707) both kidneys wet weight (CMO:0000085) 1 179567751 260522016 Rat 1600395 Niddm69 Non-insulin dependent diabetes mellitus QTL 69 4.14 0.0002 blood insulin amount (VT:0001560) plasma insulin level (CMO:0000342) 1 195804352 257091168 Rat 1354624 Cm35 Cardiac mass QTL35 5.7 heart left ventricle mass (VT:0007031) calculated heart weight (CMO:0000073) 1 177227632 256448636 Rat 1600396 Niddm68 Non-insulin dependent diabetes mellitus QTL 68 4.97 0.0003 blood glucose amount (VT:0000188) blood glucose level area under curve (AUC) (CMO:0000350) 1 195804352 257091168 Rat 1600397 Edcs4 Endometrial carcinoma susceptibility QTL 4 2.2 uterus morphology trait (VT:0001120) percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759) 1 206081677 251081677 Rat 631838 Niddm36 Non-insulin dependent diabetes mellitus QTL 36 0.01 insulin secretion trait (VT:0003564) calculated pancreatic islet insulin release measurement (CMO:0001217) 1 184550676 229550676 Rat 8693661 Alc34 Alcohol consumption QTL 34 2.2 0.611 drinking behavior trait (VT:0001422) calculated ethanol drink intake rate (CMO:0001615) 1 207987464 228627600 Rat 1549837 Hcar15 Hepatocarcinoma resistance QTL 15 0.05 liver integrity trait (VT:0010547) liver tumorous lesion number (CMO:0001068) 1 153136852 260522016 Rat 152025235 Bw194 Body weight QTL 194 4.86 body mass (VT:0001259) 1 123556856 242907031 Rat 1600388 Niddm67 Non-insulin dependent diabetes mellitus QTL 67 5.84 0.000004 blood glucose amount (VT:0000188) blood glucose level area under curve (AUC) (CMO:0000350) 1 195804352 257091168 Rat 2293694 Bss38 Bone structure and strength QTL 38 7.05 0.0001 femur strength trait (VT:0010010) femur stiffness (CMO:0001674) 1 201554356 246554356 Rat 1578759 Uae30 Urinary albumin excretion QTL 30 3.3 0.003 urine albumin amount (VT:0002871) urine albumin excretion rate (CMO:0000757) 1 150700247 252085048 Rat 8655655 Arrd2 Age-related retinal degeneration QTL 2 7.79 retinal layer morphology trait (VT:0003727) percentage of study population developing retinopathy during a period of time (CMO:0002453) 1 183970203 243914901 Rat 734767 Niddm57 Non-insulin dependent diabetes mellitus QTL 57 body mass (VT:0001259) body weight (CMO:0000012) 1 224054293 260122809 Rat 1358898 Bp255 Blood pressure QTL 255 3.6 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 1 191019702 246062233 Rat 631215 Stl8 Serum triglyceride level QTL 8 9.27 0.0001 blood triglyceride amount (VT:0002644) serum triglyceride level (CMO:0000360) 1 225126575 260522016 Rat 631843 Bw116 Body weight QTL 116 4.1 0.016 abdominal adipose amount (VT:1000220) abdominal fat pad weight (CMO:0000088) 1 224054293 260122809 Rat 2300175 Bmd40 Bone mineral density QTL 40 15.4 0.0001 femur mineral mass (VT:0010011) bone mineral density (CMO:0001226) 1 201554356 246554356 Rat 731175 Uae20 Urinary albumin excretion QTL 20 3.5 0.0018 urine albumin amount (VT:0002871) urine albumin excretion rate (CMO:0000757) 1 221264111 259647894 Rat 1354661 Bw33 Body weight QTL 33 5.2 body mass (VT:0001259) body weight (CMO:0000012) 1 151162512 256448636 Rat 724538 Kidm1 Kidney mass QTL 1 3.2 kidney mass (VT:0002707) calculated kidney weight (CMO:0000160) 1 213707201 252085212 Rat 737977 Bp160 Blood pressure QTL 160 0.001 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 1 181133855 226133855 Rat 2293655 Bss36 Bone structure and strength QTL 36 10.66 0.0001 femur strength trait (VT:0010010) femur ultimate force (CMO:0001675) 1 201554356 246554356 Rat 1298084 Thym4 Thymus enlargement QTL 4 10.68 thymus mass (VT:0004954) thymus weight to body weight ratio (CMO:0000612) 1 197814409 242814409 Rat 724531 Uae5 Urinary albumin excretion QTL 5 4 urine albumin amount (VT:0002871) urine albumin level (CMO:0000130) 1 150700142 252085212 Rat 8552891 Epfw5 Epididymal fat weight QTL 5 4.4 epididymal fat pad mass (VT:0010421) epididymal fat pad weight to body weight ratio (CMO:0000658) 1 193113876 238113876 Rat 734769 Niddm58 Non-insulin dependent diabetes mellitus QTL 58 body mass (VT:0001259) body weight (CMO:0000012) 1 224569538 260122809 Rat 734768 Niddm59 Non-insulin dependent diabetes mellitus QTL 59 body mass (VT:0001259) body weight (CMO:0000012) 1 213843987 258843987 Rat 1358890 Bp259 Blood pressure QTL 259 3.06 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 1 210702053 260522016 Rat 724533 Rf51 Renal function QTL 51 5.3 0.0002 kidney plasma flow trait (VT:0005524) renal plasma flow (CMO:0001914) 1 218753816 256448513 Rat 1354580 Scort1 Serum corticosterone level QTL 1 3.4 blood corticosterone amount (VT:0005345) blood corticosterone level (CMO:0001172) 1 156677124 256448636 Rat 1358292 Cm37 Cardiac mass QTL 37 6.2 8e-07 heart mass (VT:0007028) heart weight to body weight ratio (CMO:0000074) 1 196248093 241248093 Rat 61376 Bp42 Blood pressure QTL 42 23.4 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 1 197814409 242814409 Rat 634313 Niddm43 Non-insulin dependent diabetes mellitus QTL 43 blood glucose amount (VT:0000188) blood glucose level (CMO:0000046) 1 199050459 259647894 Rat 1549910 Bw54 Body weight QTL 54 0.05 body mass (VT:0001259) body weight (CMO:0000012) 1 214647894 259647894 Rat 70211 Niddm24 Non-insulin dependent diabetes mellitus QTL 24 3.79 blood glucose amount (VT:0000188) blood glucose level area under curve (AUC) (CMO:0000350) 1 214647894 259647894 Rat 1357399 Bw45 Body weight QTL 45 3.05 body mass (VT:0001259) body mass index (BMI) (CMO:0000105) 1 206329708 251329708 Rat 724552 Glom2 Glomerulus QTL 2 3.3 0.0001 kidney glomerulus morphology trait (VT:0005325) count of superficial glomeruli directly contacting the kidney surface (CMO:0001001) 1 222363780 260522016 Rat 1357404 Bw42 Body weight QTL 42 4.49 0.0001 body mass (VT:0001259) body weight (CMO:0000012) 1 206329708 251329708 Rat 10053715 Scort24 Serum corticosterone level QTL 24 2.13 0.0088 blood corticosterone amount (VT:0005345) plasma corticosterone level (CMO:0001173) 1 221414816 260522016 Rat 7421630 Bp362 Blood pressure QTL 362 0.001 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 1 118608292 241799120 Rat 1358916 Kidm22 Kidney mass QTL 22 3.32 kidney mass (VT:0002707) both kidneys wet weight to body weight ratio (CMO:0000340) 1 210702053 240947965 Rat 2312564 Glom18 Glomerulus QTL 18 2.4 0.003 kidney glomerulus morphology trait (VT:0005325) index of glomerular damage (CMO:0001135) 1 185356336 231689108 Rat 634321 Hc1 Hypercalciuria QTL 1 2.91 urine calcium amount (VT:0002985) urine calcium excretion rate (CMO:0000763) 1 178810256 240830002 Rat 61400 Niddm1 Non-insulin dependent diabetes mellitus QTL 1 11 blood glucose amount (VT:0000188) blood glucose level (CMO:0000046) 1 218753689 245907899 Rat 10059587 Bw173 Body weight QTL 173 3.23 0.025 body mass (VT:0001259) body weight (CMO:0000012) 1 202069611 247069611 Rat 2292216 Bw80 Body weight QTL 80 3.23 0.0019 body mass (VT:0001259) body weight (CMO:0000012) 1 213533809 243914901 Rat 1300168 Bp170 Blood pressure QTL 170 2.76 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 1 207702246 228581766 Rat 2292220 Bp306 Blood pressure QTL 306 3.47 0.00087 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 1 164310393 243914901 Rat 10059590 Kidm44 Kidney mass QTL 44 3.42 0.025 kidney mass (VT:0002707) both kidneys wet weight to body weight ratio (CMO:0000340) 1 191033875 236033875 Rat 1641926 Teswt2 Testicular weight QTL 2 2.82 testis mass (VT:1000644) both testes wet weight (CMO:0000175) 1 197697768 238755659 Rat 631658 Cm7 Cardiac mass QTL 7 5.32 0.0001 aorta mass (VT:0002845) aorta weight (CMO:0000076) 1 196248093 241248093 Rat 1354610 Bw34 Body weight QTL 34 4.1 body mass (VT:0001259) body weight (CMO:0000012) 1 151162512 256448636 Rat 2293700 Bmd27 Bone mineral density QTL 27 6.6 0.0001 femur mineral mass (VT:0010011) trabecular volumetric bone mineral density (CMO:0001729) 1 224054293 243747962 Rat 2293701 Bmd34 Bone mineral density QTL 34 8.3 0.0001 femur strength trait (VT:0010010) femoral neck ultimate force (CMO:0001703) 1 224054293 243747962 Rat 7387289 Uae45 Urinary albumin excretion QTL 45 2.86 0.0021 urine albumin amount (VT:0002871) urine albumin excretion rate (CMO:0000757) 1 223262787 260522016 Rat 8655855 Arrd3 Age-related retinal degeneration QTL 3 3.07 lens clarity trait (VT:0001304) cataract incidence/prevalence measurement (CMO:0001585) 1 183970203 243914901 Rat 634340 Hcar5 Hepatocarcinoma resistance QTL 5 8 liver integrity trait (VT:0010547) liver tumorous lesion number (CMO:0001068) 1 214537555 226660468 Rat 1600374 Mcs17 Mammary carcinoma susceptibility QTL 17 3 mammary gland integrity trait (VT:0010552) mammary tumor number (CMO:0000343) 1 197670404 242670404 Rat 6480786 Bw97 Body weight QTL 97 5.03 body mass (VT:0001259) body weight (CMO:0000012) 1 225126575 227604520 Rat 1600363 Hc6 Hypercalciuria QTL 6 2.7 urine calcium amount (VT:0002985) urine calcium excretion rate (CMO:0000763) 1 203995416 244113296 Rat 8693618 Alc25 Alcohol consumption QTL 25 3 0.28 drinking behavior trait (VT:0001422) calculated ethanol drink intake rate (CMO:0001615) 1 207987464 228627600 Rat 738032 Hcas5 Hepatocarcinoma susceptibility QTL 5 3.12 liver integrity trait (VT:0010547) liver tumorous lesion number (CMO:0001068) 1 176426412 257976495 Rat 1358191 Ept10 Estrogen-induced pituitary tumorigenesis QTL 10 3.8 pituitary gland mass (VT:0010496) pituitary gland wet weight (CMO:0000853) 1 192825253 243914732 Rat 2302040 Pia35 Pristane induced arthritis QTL 35 3.8 0.001 blood immunoglobulin amount (VT:0002460) serum immunoglobulin G1 level (CMO:0002115) 1 216255568 260522016 Rat 7394701 Uae46 Urinary albumin excretion QTL 46 3.6 0.0056 urine albumin amount (VT:0002871) urine albumin excretion rate (CMO:0000757) 1 201554356 246554356 Rat 1598821 Rf55 Renal function QTL 55 6.3 renal blood flow trait (VT:2000006) ratio of change in renal blood flow to change in renal perfusion pressure (CMO:0001239) 1 218748008 257976495 Rat
D1Got229
Rat Assembly Chr Position (strand) Source JBrowse GRCr8 1 235,566,132 - 235,566,382 (+) Marker Load Pipeline Rnor_6.0 1 246,554,654 - 246,554,888 NCBI Rnor6.0 Rnor_5.0 1 253,795,262 - 253,795,496 UniSTS Rnor5.0 RGSC_v3.4 1 232,060,231 - 232,060,481 RGD RGSC3.4 RGSC_v3.4 1 232,060,232 - 232,060,481 UniSTS RGSC3.4 RGSC_v3.1 1 232,224,255 - 232,224,504 RGD Celera 1 223,307,153 - 223,307,402 UniSTS RH 3.4 Map 1 1614.4 RGD RH 3.4 Map 1 1614.4 UniSTS Cytogenetic Map 1 q52 UniSTS
Results_ER_8_28_95_2_42.seq
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 1 226,018,279 - 226,018,467 (+) MAPPER mRatBN7.2 Rnor_6.0 1 246,419,369 - 246,419,556 NCBI Rnor6.0 Rnor_5.0 1 253,660,713 - 253,660,900 UniSTS Rnor5.0 RGSC_v3.4 1 231,922,226 - 231,922,413 UniSTS RGSC3.4 Celera 1 223,172,850 - 223,173,037 UniSTS Cytogenetic Map 1 q52 UniSTS
AU047613
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 1 226,142,736 - 226,142,872 (+) MAPPER mRatBN7.2 Rnor_6.0 1 246,544,813 - 246,544,948 NCBI Rnor6.0 Rnor_5.0 1 253,786,039 - 253,786,174 UniSTS Rnor5.0 RGSC_v3.4 1 232,049,629 - 232,049,764 UniSTS RGSC3.4 Celera 1 223,297,268 - 223,297,403 UniSTS Cytogenetic Map 1 q52 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
9
11
48
113
90
89
58
25
58
6
216
96
93
45
60
31
Too many to show, limit is 500. Download them if you would like to view them all.
Ensembl Acc Id:
ENSRNOT00000019816 ⟹ ENSRNOP00000019816
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 1 226,066,582 - 226,395,899 (-) Ensembl Rnor_6.0 Ensembl 1 246,380,889 - 246,785,360 (-) Ensembl
Ensembl Acc Id:
ENSRNOT00000097425 ⟹ ENSRNOP00000093536
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 1 225,976,326 - 226,395,899 (-) Ensembl
RefSeq Acc Id:
XM_039101395 ⟹ XP_038957323
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 1 235,389,567 - 235,809,416 (-) NCBI mRatBN7.2 1 225,976,029 - 226,395,846 (-) NCBI
RefSeq Acc Id:
XM_039101396 ⟹ XP_038957324
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 1 235,389,567 - 235,795,141 (-) NCBI mRatBN7.2 1 225,976,029 - 226,381,591 (-) NCBI
RefSeq Acc Id:
XM_039101397 ⟹ XP_038957325
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 1 235,389,567 - 235,795,237 (-) NCBI mRatBN7.2 1 225,976,029 - 226,381,670 (-) NCBI
RefSeq Acc Id:
XM_063281030 ⟹ XP_063137100
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 1 235,389,567 - 235,795,228 (-) NCBI
RefSeq Acc Id:
XR_005499631
Type:
NON-CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 1 235,484,167 - 235,809,416 (-) NCBI mRatBN7.2 1 226,070,614 - 226,395,849 (-) NCBI
Ensembl Acc Id:
ENSRNOP00000019816 ⟸ ENSRNOT00000019816
RefSeq Acc Id:
XP_038957323 ⟸ XM_039101395
- Peptide Label:
isoform X1
RefSeq Acc Id:
XP_038957325 ⟸ XM_039101397
- Peptide Label:
isoform X3
RefSeq Acc Id:
XP_038957324 ⟸ XM_039101396
- Peptide Label:
isoform X3
Ensembl Acc Id:
ENSRNOP00000093536 ⟸ ENSRNOT00000097425
RefSeq Acc Id:
XP_063137100 ⟸ XM_063281030
- Peptide Label:
isoform X2
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2021-03-09
Glis3
GLIS family zinc finger 3
NEWGENE_1565505
GLIS family zinc finger 3
Data merged from RGD:9472608
737654 PROVISIONAL
2014-08-25
NEWGENE_1565505
GLIS family zinc finger 3
Symbol and Name status set to provisional
70820 PROVISIONAL
2013-08-07
Glis3
GLIS family zinc finger 3
RGD1565505
similar to Zinc finger protein GLIS3 (GLI-similar 3)
Nomenclature updated to reflect human and mouse nomenclature
1299863 APPROVED
2013-05-24
RGD1565505
similar to Zinc finger protein GLIS3 (GLI-similar 3)
LOC687614
hypothetical protein LOC687614
Data merged from RGD:1583092
1643240 APPROVED
2011-09-08
RGD1565505
similar to Zinc finger protein GLIS3 (GLI-similar 3)
LOC680671
hypothetical protein LOC680671
Data merged from RGD:1589405
737654 APPROVED
2008-04-30
RGD1565505
similar to Zinc finger protein GLIS3 (GLI-similar 3)
RGD1565505_predicted
similar to Zinc finger protein GLIS3 (GLI-similar 3) (predicted)
'predicted' is removed
2292626 APPROVED
2006-11-19
LOC680671
hypothetical protein LOC680671
Symbol and Name status set to provisional
70820 PROVISIONAL
2006-11-19
LOC687614
hypothetical protein LOC687614
Symbol and Name status set to provisional
70820 PROVISIONAL
2006-03-07
RGD1565505_predicted
similar to Zinc finger protein GLIS3 (GLI-similar 3) (predicted)
LOC293882
similar to Zinc finger protein GLIS3 (GLI-similar 3)
Symbol and Name status set to approved
1299863 APPROVED
2006-02-09
LOC293882
similar to Zinc finger protein GLIS3 (GLI-similar 3)
Symbol and Name status set to provisional
70820 PROVISIONAL
