Bw97 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Bw97 (Body weight QTL 97) Rattus norvegicus

Symbol: Bw97
Name: Body weight QTL 97
RGD ID: 6480786
Trait: body mass   (VT:0001259)    
Measurement Type: body weight   (CMO:0000012)    
LOD Score: 5.03
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21225,126,575 - 227,604,520RGD_MAPPER_PIPELINE
Rnor_6.01245,529,606 - 248,013,094RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01252,776,360 - 255,263,602RGDRnor5.0
RGSC_v3.41230,963,695 - 233,551,254RGDRGSC3.4
Cross Type: Not Available
Strains Crossed: NMcwi:HS 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
Weight Gain  (IAGP)

Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement
body weight  (IDA)

Experimental Condition

Measurement Method
scale  (IDA)

Vertebrate Trait
body mass  (IDA)

Rat Strain
NMcwi:HS  (IEA)

References


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
7700759LOC102555808uncharacterized LOC1025558081245536381245544231Rat
11469170LOC108349357uncharacterized LOC1083493571245557810245559469Rat
7566943LOC102555989uncharacterized LOC1025559891245692004245736856Rat
2325049LOC100359682eukaryotic translation initiation factor 4E-like1245774492245774938Rat
1307779Rfx3regulatory factor X31245853332246110648Rat
7517961LOC102550663THO complex subunit 3-like1246067375246069573Rat
1589453LOC680623hypothetical protein LOC6806231246141856246143074Rat
1565505Glis3GLIS family zinc finger 31246380816246564385Rat
7628278LOC102556263uncharacterized LOC1025562631246572125246585195Rat
9270246LOC103691326uncharacterized LOC1036913261246599944246602237Rat
9425434LOC103691327uncharacterized LOC1036913271246623875246647311Rat
7711868LOC102550766phosphatidylethanolamine-binding protein 1-like1246697358246715710Rat
9459053LOC103691328uncharacterized LOC1036913281246736363246747100Rat
7715694LOC102546345uncharacterized LOC1025463451246926646246957559Rat
3696Slc1a1solute carrier family 1 member 11246955017247035159Rat
9458091LOC103691329uncharacterized LOC1036913291246986205246990035Rat
7615968LOC10254642960S ribosomal protein L27a-like1247004745247009551Rat
1310039Spata6lspermatogenesis associated 6-like1247037004247088124Rat
1566000Plpp6phospholipid phosphatase 61247084228247087080Rat
1588239LOC680727similar to Phytanoyl-CoA dioxygenase, peroxisomal precursor (Phytanoyl-CoA alpha-hydroxylase) (PhyH) (Phytanic acid oxidase)1247093572247094465Rat
1565057RGD1565057similar to hypothetical protein FLJ328711247094538247110187Rat
1309295Cdc37l1cell division cycle 37-like 11247110147247139113Rat
619885Ak3adenylate kinase 31247144486247169690Rat
1305320Rcl1RNA terminal phosphate cyclase-like 11247228012247272369Rat
2325609Mir101-2microRNA 101-21247263723247263819Rat
9204586LOC103691342dynein light chain 1, cytoplasmic-like1247316399247317650Rat
9148072LOC103691330uncharacterized LOC1036913301247327409247338211Rat
2939Jak2Janus kinase 21247398667247457521Rat
62061Insl6insulin-like 61247473292247476827Rat
7710008LOC102546806prohibitin-like1247476925247478758Rat
3579Rln1relaxin 11247483298247486331Rat
1306839Plgrktplasminogen receptor with a C-terminal lysine1247502274247514540Rat
1566211Cd274CD274 molecule1247519890247539659Rat
1585881LOC680908hypothetical protein LOC6809081247555732247556767Rat
1306403Pdcd1lg2programmed cell death 1 ligand 21247562202247629279Rat
7691232LOC102547032uncharacterized LOC1025470321247563467247571662Rat
1310016Ric1RIC1 homolog, RAB6A GEF complex partner 11247688778247784219Rat
727831Ermp1endoplasmic reticulum metallopeptidase 11247784830247821771Rat
1306525Mlanamelan-A1247869756247883558Rat
1311595RGD1311595similar to KIAA2026 protein1247898572247978661Rat
11481274LOC10834943360S ribosomal protein L7a pseudogene1247950796247951597Rat
1305165Ranbp6RAN binding protein 61247980976247985553Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
34009D1Mit341241245529606245529710Ratregion
41392D1Rat3021591247065439247065599Ratregion
42530D1Rat4452251245840355245840558Ratregion
41610D1Rat3002781248012805248013094Ratregion
43422D1Got2251961247757069247757264Ratregion
43423D1Got2281191246226103246226218Ratregion
43426D1Got2311101246115479246115588Ratregion
60222D1Got2241551247478769247478919Ratregion
60224D1Got2292531246554654246554888Ratregion
60225D1Got2301601247515499247515658Ratregion
1639989D1Cebr61421247596785247596926Ratregion
1640354D1Got343941247503045247503138Ratregion
5026008RH1305552081247170655247170862Ratregion
5029059RH1433611251247138570247138694Ratregion
5034600BF3900101411247150147247150287Ratregion
5029727BE1021131621245898149245898310Ratregion
5029935BF3880171521247137845247137996Ratregion
5032781RH1352771941245800711245800903Ratregion
5025242RH1275641881247892430247892617Ratregion
5025242RH1275641881247884092247884279Ratregion
5028057Results_ER_8_28_95_2_42.seq1881246419369246419556Ratregion
5030741BE1078591951247944493247944687Ratregion
5025666RH1291951951247142625247142819Ratregion
5025768RH1295871571247787621247787777Ratregion
5057209D1Bda602001247483432247483631Ratregion
5057211D1Bda612341247457272247457505Ratregion
5050068RH1338442171247272011247272227Ratregion
5053857RH1428911061247981012247981117Ratregion
5053279RH1425561501247812177247812326Ratregion
5044000RH1303532021247784868247785069Ratregion
5040808RH1284951811247898793247898973Ratregion
5045494RH1312101881247138818247139005Ratregion
5044302RH1305251841247036873247037056Ratregion
5047630RH1324382031247899621247899823Ratregion
5047968RH1326332021247783986247784187Ratregion
5042258RH1293311891247458302247458490Ratregion
5042988RH1297632061247891686247891891Ratregion
5042988RH1297632061247883348247883553Ratregion
5043306RH1299501891247502410247502598Ratregion
5041086RH1286541931247086735247086927Ratregion
5078100RH1401431971247144507247144703Ratregion
5080158RH1414182001247457540247457739Ratregion
5080202RH1414441941247626712247626905Ratregion
5080460RH1415911991247797761247797959Ratregion
5073732RH1376061371247912264247912400Ratregion
5067658AU0476131361246544813246544948Ratregion
5070143RH944971311247483355247483486Ratregion
5064056BE1205731531247034958247035110Ratregion
5065736BE1097541661247143057247143222Ratregion
5064842BF3998451741246956938246957111Ratregion
5084924AI2367391991247152309247152507Ratregion
5086333AA9564241911247785686247785876Ratregion
5503308UniSTS:2379191701247981001247981170Ratregion
5504205BARC00732191246142301246142505Ratregion
5507003fi76b03.x18451247870293247871137Ratregion
Position Markers

Flank 1: (D1Mit34)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21225,126,575 - 225,126,682 (+)MAPPER
Rnor_6.01245,529,606 - 245,529,710NCBI
Rnor_5.01252,776,360 - 252,776,464UniSTS
RGSC_v3.41230,963,695 - 230,963,799UniSTS
RGSC_v3.41230,963,697 - 230,963,799RGD
RGSC_v3.11231,127,720 - 231,127,822RGD
Celera1222,301,636 - 222,301,740UniSTS
RH 3.4 Map11608.7RGD
RH 3.4 Map11608.7UniSTS
SHRSP x BN Map1125.45UniSTS
SHRSP x BN Map1125.45RGD
FHH x ACI Map1111.25RGD
Cytogenetic Map1 RGD
Peak: (D1Rat302)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21226,660,307 - 226,660,468 (+)MAPPER
Rnor_6.01247,065,439 - 247,065,599NCBI
Rnor_5.01254,305,181 - 254,305,341UniSTS
RGSC_v3.41232,579,831 - 232,579,992RGD
RGSC_v3.41232,579,832 - 232,579,992UniSTS
RGSC_v3.11232,743,855 - 232,744,015RGD
Celera1223,813,143 - 223,813,303UniSTS
RH 3.4 Map11608.6UniSTS
RH 3.4 Map11608.6RGD
SHRSP x BN Map1126.57UniSTS
SHRSP x BN Map1126.57RGD
Cytogenetic Map1q52UniSTS
Flank 2: (D1Rat300)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21227,604,230 - 227,604,520 (+)MAPPER
Rnor_6.01248,012,805 - 248,013,094NCBI
Rnor_5.01255,263,313 - 255,263,602UniSTS
RGSC_v3.41233,550,964 - 233,551,254RGD
RGSC_v3.41233,550,965 - 233,551,254UniSTS
RGSC_v3.11233,714,988 - 233,715,277RGD
Celera1224,754,487 - 224,754,776UniSTS
RH 3.4 Map11617.4UniSTS
RH 3.4 Map11617.4RGD
RH 2.0 Map11178.1RGD


QTLs in Region (Rnor_6.0)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
7794788Mcs32Mammary carcinoma susceptibility QTL 322.61mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)1122614824262664716Rat
7421630Bp362Blood pressure QTL 3620.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1125875758262433692Rat
2302378Insul11Insulin level QTL 113.25blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1156446196274977688Rat
724531Uae5Urinary albumin excretion QTL 54urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)1161321152273792054Rat
1578759Uae30Urinary albumin excretion QTL 303.30.003urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1161321256273791893Rat
1578778Pur4Proteinuria QTL 43.30.003total urine protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)1161321256273791893Rat
1354646Kidm18Kidney mass QTL 185.7kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1161784169278228889Rat
1354661Bw33Body weight QTL 335.2body mass (VT:0001259)body weight (CMO:0000012)1161784169278228889Rat
1354610Bw34Body weight QTL 344.1body mass (VT:0001259)body weight (CMO:0000012)1161784169278228889Rat
1358886Bp260Blood pressure QTL 2603.67arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1161784422246226103Rat
1549837Hcar15Hepatocarcinoma resistance QTL 150.05liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1163796316282763074Rat
1354580Scort1Serum corticosterone level QTL 13.4blood corticosterone amount (VT:0005345)blood corticosterone level (CMO:0001172)1167394665278228889Rat
2292220Bp306Blood pressure QTL 3063.470.00087arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1174905700264802994Rat
738032Hcas5Hepatocarcinoma susceptibility QTL 53.12liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1191825895279986079Rat
1354652Kidm20Kidney mass QTL 204.3kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1192639698278228889Rat
1354624Cm35Cardiac mass QTL355.7heart left ventricle mass (VT:0007031)calculated heart weight (CMO:0000073)1192639698278228889Rat
634321Hc1Hypercalciuria QTL 12.91urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)1193968438261264776Rat
1600363Hc6Hypercalciuria QTL 62.7urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)1195598053265002735Rat
1578763Kidm29Kidney mass QTL 293.30.0001kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1196395041282763074Rat
2312564Glom18Glomerulus QTL 182.40.003kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)1201358068252480016Rat
8655855Arrd3Age-related retinal degeneration QTL 33.07lens clarity trait (VT:0001304)cataract incidence/prevalence measurement (CMO:0001585)1202571665264802994Rat
8655655Arrd2Age-related retinal degeneration QTL 27.79retinal layer morphology trait (VT:0003727)percentage of study population developing retinopathy during a period of time (CMO:0002453)1202571665264802994Rat
631838Niddm36Non-insulin dependent diabetes mellitus QTL 360.01insulin secretion trait (VT:0003564)calculated pancreatic islet insulin release measurement (CMO:0001217)1205195290250195290Rat
1358898Bp255Blood pressure QTL 2553.6arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1208517798266948272Rat
1358191Ept10Estrogen-induced pituitary tumorigenesis QTL 103.8pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)1210360774264802828Rat
8552891Epfw5Epididymal fat weight QTL 54.4epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)1210652654255652654Rat
10059590Kidm44Kidney mass QTL 443.420.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)1210990171255990171Rat
1600388Niddm67Non-insulin dependent diabetes mellitus QTL 675.840.000004blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1213476630278978026Rat
1600395Niddm69Non-insulin dependent diabetes mellitus QTL 694.140.0002blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)1213476630278978026Rat
1600396Niddm68Non-insulin dependent diabetes mellitus QTL 684.970.0003blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1213476630278978026Rat
1600374Mcs17Mammary carcinoma susceptibility QTL 173mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)1215684498260684498Rat
1641926Teswt2Testicular weight QTL 22.82testis mass (VT:1000644)both testes wet weight (CMO:0000175)1215711860258765521Rat
2302375Bw83Body weight QTL 834.870.0002body mass (VT:0001259)body weight (CMO:0000012)1215711860260711860Rat
1298084Thym4Thymus enlargement QTL 410.68thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)1215828102260828102Rat
1357335Bw39Body weight QTL 393.3body mass (VT:0001259)body weight (CMO:0000012)1215828102260828102Rat
61376Bp42Blood pressure QTL 4223.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1215828102260828102Rat
1331790Bp201Blood pressure QTL 2013.127arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1216213318245529710Rat
631658Cm7Cardiac mass QTL 75.320.0001aorta mass (VT:0002845)aorta weight (CMO:0000076)1216324817261324817Rat
1358292Cm37Cardiac mass QTL 376.20.00000081heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)1216324817261324817Rat
634313Niddm43Non-insulin dependent diabetes mellitus QTL 43blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1217054291281795785Rat
2300175Bmd40Bone mineral density QTL 4015.40.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)1221901238266901238Rat
2293655Bss36Bone structure and strength QTL 3610.660.0001femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)1221901238266901238Rat
2293674Bss39Bone structure and strength QTL 397.10.0001femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)1221901238266901238Rat
2293694Bss38Bone structure and strength QTL 387.050.0001femur strength trait (VT:0010010)femur stiffness (CMO:0001674)1221901238266901238Rat
7394701Uae46Urinary albumin excretion QTL 463.60.0056urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1221901238266901238Rat
10059587Bw173Body weight QTL 1733.230.025body mass (VT:0001259)body weight (CMO:0000012)1222492538267492538Rat
61403Niddm4Non-insulin dependent diabetes mellitus QTL 4blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)1225689973247836969Rat
1357399Bw45Body weight QTL 453.05body mass (VT:0001259)body mass index (BMI) (CMO:0000105)1225689973270689973Rat
1357404Bw42Body weight QTL 424.490.0001body mass (VT:0001259)body weight (CMO:0000012)1225689973270689973Rat
1600397Edcs4Endometrial carcinoma susceptibility QTL 42.2uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)1226706329271706329Rat
1300168Bp170Blood pressure QTL 1702.76arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1227107736249206417Rat
8693661Alc34Alcohol consumption QTL 342.20.611drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)1227509470249252048Rat
8693618Alc25Alcohol consumption QTL 2530.28drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)1227509470249252048Rat
8693637Alc29Alcohol consumption QTL 292.70.258drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)1227509470255131140Rat
1358916Kidm22Kidney mass QTL 223.32kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)1230420627262031693Rat
1358890Bp259Blood pressure QTL 2593.06arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1230420627282645769Rat
2292216Bw80Body weight QTL 803.230.0019body mass (VT:0001259)body weight (CMO:0000012)1233490105264802994Rat
724538Kidm1Kidney mass QTL 13.2kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1233663100273792054Rat
734768Niddm59Non-insulin dependent diabetes mellitus QTL 59body mass (VT:0001259)body weight (CMO:0000012)1235850810280850810Rat
2302040Pia35Pristane induced arthritis QTL 353.80.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)1236265430281265430Rat
61327Eae7Experimental allergic encephalomyelitis QTL 75.6body mass (VT:0001259)change in body weight (CMO:0002045)1236265430281265430Rat
634340Hcar5Hepatocarcinoma resistance QTL 58liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1236763415247065599Rat
61455Niddm7Non-insulin dependent diabetes mellitus QTL 75.5blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)1236763415258766873Rat
70211Niddm24Non-insulin dependent diabetes mellitus QTL 243.79blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1236795785281795785Rat
1549910Bw54Body weight QTL 540.05body mass (VT:0001259)body weight (CMO:0000012)1236795785281795785Rat
1598821Rf55Renal function QTL 556.3renal blood flow trait (VT:2000006)ratio of change in renal blood flow to change in renal perfusion pressure (CMO:0001239)1238824734279986079Rat
61400Niddm1Non-insulin dependent diabetes mellitus QTL 111blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1238830408266793958Rat
724533Rf51Renal function QTL 515.30.0002kidney plasma flow trait (VT:0005524)renal plasma flow (CMO:0001914)1238830534278228767Rat
731175Uae20Urinary albumin excretion QTL 203.50.0018urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1241482188281795785Rat
10053715Scort24Serum corticosterone level QTL 242.130.0088blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)1242302911282763074Rat
724552Glom2Glomerulus QTL 23.30.0001kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli directly contacting the kidney surface (CMO:0001001)1243272341282763074Rat
1600392Bw123Body weight QTL 1230.001body mass (VT:0001259)body weight (CMO:0000012)1244087148282763074Rat
7387289Uae45Urinary albumin excretion QTL 452.860.0021urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1244148899282763074Rat
2293700Bmd27Bone mineral density QTL 276.60.0001femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)1244401175264636028Rat
2293701Bmd34Bone mineral density QTL 348.30.0001femur strength trait (VT:0010010)femoral neck ultimate force (CMO:0001703)1244401175264636028Rat
631843Bw116Body weight QTL 1164.10.016abdominal adipose amount (VT:1000220)abdominal fat pad weight (CMO:0000088)1244401175282365384Rat
734767Niddm57Non-insulin dependent diabetes mellitus QTL 57body mass (VT:0001259)body weight (CMO:0000012)1244401175282365384Rat
734769Niddm58Non-insulin dependent diabetes mellitus QTL 58body mass (VT:0001259)body weight (CMO:0000012)1244992467282365384Rat
6480786Bw97Body weight QTL 975.03body mass (VT:0001259)body weight (CMO:0000012)1245529606248013094Rat
631215Stl8Serum triglyceride level QTL 89.270.0001blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)1245529606282763074Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general measurement method: body weight was recorded 6893578
qtl_general number of animals used: 10-21 male rats from the founders and 782 male NMcwi:HS rats 6893578
qtl_general software used:ANOVA 6893578
qtl_map 232.58–233.29 Mb 6893578