Hcar5 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Hcar5 (Hepatocarcinoma resistance QTL 5) Rattus norvegicus

Symbol: Hcar5
Name: Hepatocarcinoma resistance QTL 5
RGD ID: 634340
Also known as: Drh1b; Hcr5
Trait: liver integrity trait   (VT:0010547)    
Measurement Type: liver tumorous lesion number   (CMO:0001068)    
LOD Score: 8.0
P Value: Not Available
Variance: Not Available
Inheritance Type: recessive
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21214,537,555 - 226,660,468RGD_MAPPER_PIPELINE
Rnor_6.01236,763,415 - 247,065,599RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01244,066,294 - 254,305,341RGDRnor5.0
RGSC_v3.41220,639,539 - 232,579,992RGDRGSC3.4
RGSC_v3.11220,803,562 - 232,744,015RGD
Cross Type: intercross
Strains Crossed: F344/NRrrc DRH/Seac 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Candidate Gene Status
Cyp17a1 is a candidate Gene for Hcar5
Cyp2c11 is a candidate Gene for Hcar5

Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Vertebrate Trait

Rat Strain
DRH/Seac  (IEA)
F344/NRrrc  (IEA)

References

References - curated
1. Yan Y, etal., Carcinogenesis 2002 Jan;23(1):189-96.
2. Zeng ZZ, etal., Cancer Res 2000 Jun 1;60(11):2876-81.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1311350Prune2prune homolog 2 with BCH domain1236676963236947527Rat
7689479LOC102546963protein prune homolog 2-like1236883677236947150Rat
6494111LOC100911189fructose-bisphosphate aldolase A-like1237441138237442585Rat
2323439LOC100363201nucleophosmin 1-like1237560904237561831Rat
9136630LOC103691305transcription factor BTF3 homolog 4-like1237566660237575214Rat
1563931RGD1563931similar to basic transcription factor 31237574877237575252Rat
2118Anxa1annexin A11237893983237910002Rat
11359654LOC10834969960S ribosomal protein L17 pseudogene1238042544238045148Rat
2087Aldh1a1aldehyde dehydrogenase 1 family, member A11238222689238264381Rat
1308682Tmc1transmembrane channel-like 11238336919238525792Rat
7657219LOC102551351uncharacterized LOC1025513511238717144238759436Rat
11492063LOC108348874glyceraldehyde-3-phosphate dehydrogenase pseudogene1238792028238792460Rat
1310776Zfand5zinc finger AN1-type containing 51238842506238854030Rat
7618157LOC102551544uncharacterized LOC1025515441238869869238873182Rat
9142228LOC103691306uncharacterized LOC1036913061238870341238899230Rat
621617Gdaguanine deaminase1238982542239057663Rat
6490675LOC100911842uncharacterized LOC1009118421239150948239156067Rat
1359158RGD1359158similar to RIKEN cDNA 1110059E241239207869239265997Rat
1305246Abhd17babhydrolase domain containing 17B, depalmitoylase1239266140239301133Rat
11381164LOC108348948uncharacterized LOC1083489481239308739239321140Rat
9111077LOC103691307fatty acid-binding protein, epidermal pseudogene1239319167239319922Rat
1584793LOC679749similar to ribosomal protein S111239332832239333355Rat
1307941Cemip2cell migration inducing hyaluronidase 21239397322239474931Rat
7632678LOC102551900uncharacterized LOC1025519001239397488239406410Rat
1304888Trpm3transient receptor potential cation channel, subfamily M, member 31239741572240757583Rat
11411734LOC10834982160S ribosomal protein L17 pseudogene1239847790239848395Rat
9227186LOC103691308ubiquitin-conjugating enzyme E2 D2 pseudogene1239874432239876360Rat
11462102LOC108349822uncharacterized LOC1083498221240034613240038421Rat
6489406LOC100912018mitochondrial import inner membrane translocase subunit Tim23-like1240052911240061514Rat
11518304LOC108349823uncharacterized LOC1083498231240340056240347642Rat
7503291LOC102552001uncharacterized LOC1025520011240372711240384741Rat
2325551Mir204microRNA 2041240403000240403109Rat
620252Aldh1a7aldehyde dehydrogenase family 1, subfamily A71240584233240601843Rat
9265596LOC103691311uncharacterized LOC1036913111240759947240764054Rat
1561453RGD1561453similar to ribosomal protein S121240776538240777502Rat
11445681LOC108349100uncharacterized LOC1083491001240808272240831711Rat
9474149LOC103691312uncharacterized LOC1036913121240907030240908994Rat
70934Klf9Kruppel-like factor 91240908483240933198Rat
1307492Smc5structural maintenance of chromosomes 51240977898241046273Rat
1305129Mamdc2MAM domain containing 21241071110241223798Rat
9335366LOC103691318NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11 pseudogene1241280663241282650Rat
1560242RGD1560242similar to RIKEN cDNA 1700028P141241338704241460868Rat
1564433RGD1564433similar to glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (EC 1.2.1.12)1241466676241467020Rat
7599198LOC102554385glyceraldehyde-3-phosphate dehydrogenase-like1241473205241478465Rat
7692674LOC102554712uncharacterized LOC1025547121241477668241498888Rat
708369Ptar1protein prenyltransferase alpha subunit repeat containing 11241501679241557651Rat
620844Apba1amyloid beta precursor protein binding family A member 11241594565241796512Rat
1307524Fam189a2family with sequence similarity 189, member A21241822152241876089Rat
619807Tjp2tight junction protein 21241945816242084044Rat
1565754Fxnfrataxin1242123975242152834Rat
1310914Pip5k1bphosphatidylinositol-4-phosphate 5-kinase type 1 beta1242168462242441247Rat
7613404LOC102555386uncharacterized LOC1025553861242360611242448296Rat
1310316Pabir1PP2A Aalpha (PPP2R1A) and B55A (PPP2R2A) interacting phosphatase regulator 11242372458242373764Rat
1359349Tmem252transmembrane protein 2521242572558242577817Rat
1307969Pgm5phosphoglucomutase 51242582591242765837Rat
9183372LOC103691313histone H3.3-like1242760654242761282Rat
621716Foxd4forkhead box D41242808886242810186Rat
708495Cbwd1COBW domain containing 11242819383242861792Rat
7729455LOC102556915uncharacterized LOC1025569151242861859242871484Rat
1561588Dock8dedicator of cytokinesis 81242934685243153472Rat
9462182C1H9orf66chromosome 1 open reading frame, human C9orf661242958912242961750Rat
1596834Hmgb1-ps4high-mobility group box 1, pseudogene 41243107923243109335Rat
11474936LOC108349152uncharacterized LOC1083491521243184048243189000Rat
1307714Kank1KN motif and ankyrin repeat domains 11243201073243398531Rat
7600426LOC102554752uncharacterized LOC1025547521243299060243309760Rat
2323621LOC100359573RAN, member RAS oncogene family1243466921243467553Rat
621640Dmrt1doublesex and mab-3 related transcription factor 11243477403243582629Rat
1306043Dmrt3doublesex and mab-3 related transcription factor 31243589607243602926Rat
1309047Dmrt2doublesex and mab-3 related transcription factor 21243662819243669312Rat
11400155LOC108349212uncharacterized LOC1083492121243906623243915474Rat
9367821LOC103691314uncharacterized LOC1036913141243977808243979207Rat
9327776LOC103691315uncharacterized LOC1036913151244057932244068687Rat
11478594LOC108349233uncharacterized LOC1083492331244160361244204257Rat
7594231LOC102555110uncharacterized LOC1025551101244264352244272545Rat
9160927LOC103695057uncharacterized LOC1036950571244293162244312066Rat
1562774RGD1562774similar to proteasome (prosome, macropain) subunit, beta type 61244380581244381353Rat
9453920LOC103691317uncharacterized LOC1036913171244447065244452764Rat
11465647LOC108349293uncharacterized LOC1083492931244612142244617696Rat
1302988Smarca2SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 21244615811244783736Rat
9413911LOC103691324uncharacterized LOC1036913241244778795244779494Rat
11409422LOC108348917uncharacterized LOC1083489171244858784244860281Rat
7524986LOC102555475uncharacterized LOC1025554751244967275244968097Rat
6495932LOC10091093040S ribosomal protein S17-like1245013149245013549Rat
7599954LOC102557104uncharacterized LOC1025571041245078449245097663Rat
3963Vldlrvery low density lipoprotein receptor1245236819245273688Rat
7656472LOC102555714uncharacterized LOC1025557141245315715245359601Rat
9187932LOC103691325uncharacterized LOC1036913251245360302245370047Rat
1309271Kcnv2potassium voltage-gated channel modifier subfamily V member 21245396880245475011Rat
1564753Pum3pumilio RNA-binding family member 31245476400245517081Rat
7700759LOC102555808uncharacterized LOC1025558081245536381245544231Rat
11469170LOC108349357uncharacterized LOC1083493571245557810245559469Rat
7566943LOC102555989uncharacterized LOC1025559891245692004245736856Rat
2325049LOC100359682eukaryotic translation initiation factor 4E-like1245774492245774938Rat
1307779Rfx3regulatory factor X31245853332246110648Rat
7517961LOC102550663THO complex subunit 3-like1246067375246069573Rat
1589453LOC680623hypothetical protein LOC6806231246141856246143074Rat
1565505Glis3GLIS family zinc finger 31246380816246564385Rat
7628278LOC102556263uncharacterized LOC1025562631246572125246585195Rat
9270246LOC103691326uncharacterized LOC1036913261246599944246602237Rat
9425434LOC103691327uncharacterized LOC1036913271246623875246647311Rat
7711868LOC102550766phosphatidylethanolamine-binding protein 1-like1246697358246715710Rat
9459053LOC103691328uncharacterized LOC1036913281246736363246747100Rat
7715694LOC102546345uncharacterized LOC1025463451246926646246957559Rat
3696Slc1a1solute carrier family 1 member 11246955017247035159Rat
9458091LOC103691329uncharacterized LOC1036913291246986205246990035Rat
7615968LOC10254642960S ribosomal protein L27a-like1247004745247009551Rat
1310039Spata6lspermatogenesis associated 6-like1247037004247088124Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
43424D1Wox10901236763415236763528Ratregion
7205874FLRT213811236892152236893532Ratregion
1638265D1Got3951701236926981236927150Ratregion
5504861ha261101236939211236940849Ratregion
43418D1Got2142151236971905236972119Ratregion
42526D1Rat3683431237050330237050665Ratregion
62489D1Uia72271237117649237117871Ratregion
41048D1Rat2962461237187160237187401Ratregion
8663443rs1055602111237596190237596190Ratregion
5042762RH1296311851237894024237894208Ratregion
5051675RH945931871237894035237894221Ratregion
5025266RH1276562061237894040237894245Ratregion
5057205D1Bda582541237894046237894299Ratregion
5055207RH1436681601237909274237909433Ratregion
1635712D1Got342901238080353238080442Ratregion
5046786RH1319541861238085316238085501Ratregion
37754D1Rat1231991238220189238220385Ratregion
5057203D1Bda572081238264012238264219Ratregion
5073162RH1372751871238264083238264269Ratregion
5051743RH946331791238264117238264295Ratregion
60219D1Got2192771238701789238702065Ratregion
36866D1Rat731801238824734238824901Ratregion
33945D1Mit181211238830408238830534Ratregion
5048052RH1326802191238841935238842153Ratregion
5502070MARC_26819-26820:1034280769:31101238847486238848174Ratregion
5502319RH1244631391238850288238850993Ratregion
5500226AU0217211171238850332238851015Ratregion
5028316D9S19862761238852007238852282Ratregion
5077546RH1398181941238854592238854785Ratregion
5060314AW5313571741238855216238855389Ratregion
5030725BE1077751521238856509238856660Ratregion
5066454AU0483472311238902564238902794Ratregion
5045134RH1310032201238976524238976743Ratregion
5048518RH1329492181238978224238978441Ratregion
5042808RH1296581801238978926238979105Ratregion
41168D1Rat2992271239048305239048530Ratregion
1639509D1Wox861601239082141239082300Ratregion
37162D1Rat721631239082635239082791Ratregion
5076908RH1394481241239205888239206011Ratregion
5039140RH1275351871239208006239208192Ratregion
5030603BE1136451791239241639239241817Ratregion
5026524RH1325442201239263680239263899Ratregion
5030847BE1206671791239413772239413950Ratregion
1629229D1Got341881239420980239421067Ratregion
5054563RH1432961091239451095239451203Ratregion
5078460RH1403561661239473968239474133Ratregion
5071822RH1353042051239881284239881488Ratregion
41036D1Rat2982071240017117240017341Ratregion
5064484BE1080611831240133150240133332Ratregion
5065090BF4057861851240207089240207273Ratregion
5063554BE1077882041240214177240214380Ratregion
5082043BF4157731311240230832240230962Ratregion
41806D1Rat3702311240251616240251839Ratregion
5071350RH1350311811240423678240423858Ratregion
42527D1Rat3692441240660288240660546Ratregion
5082637BF4164871471240671511240671657Ratregion
5059112BE1028511921240687347240687538Ratregion
5032483D19Ertd744e2201240751174240751393Ratregion
5055969RH1441071711240756114240756284Ratregion
5046470RH1317711701240760414240760583Ratregion
5029275RH1441791341240917374240917507Ratregion
43605D1Got2221841240928740240928923Ratregion
5037073WI-203732221240934704240934925Ratregion
5084580AA9463752451240978414240978658Ratregion
5053349RH1425972351240980582240981886Ratregion
5031460AU0482502391241040292241040530Ratregion
5070534AU0153942321241056843241057074Ratregion
42528D1Rat4432051241219437241219635Ratregion
5501618REN107D226321241276611241277242Ratregion
8663445rs640429031241320305241320305Ratregion
5090675AU0498942621241337008241337269Ratregion
35909D1Rat741811241482188241482368Ratregion
5062964BE1135071931241552884241553076Ratregion
5080562RH1416512061241565557241565762Ratregion
5074152RH1378511971241567266241567462Ratregion
60221D1Got2212091241593013241593221Ratregion
5058686BF3935221391241736439241736577Ratregion
5505309Mlf26061241793026241793631Ratregion
5041550RH1289211821241822201241822382Ratregion
60223D1Got2262071241902105241902311Ratregion
42529D1Rat4442841241937521241937811Ratregion
5048252RH1327961881241945898241946085Ratregion
5047780RH1325241971242010632242010828Ratregion
5087317BQ1953062021242124315242124559Ratregion
5057376AA851370991242168864242168962Ratregion
66618D1Mco412901242176983242177304Ratregion
5085282BM3900652161242240047242240262Ratregion
5082791BF3901181501242374462242374611Ratregion
5061622BF4022961181242376196242376313Ratregion
5044202RH1304681831242508485242508667Ratregion
60220D1Got2202291242520554242520779Ratregion
1638953D1Got4372591242520835242521093Ratregion
5077256RH1396521991242577460242577658Ratregion
5084314AI1693111271242577532242577658Ratregion
43461D1Got2231481242689697242689841Ratregion
5076296RH1390932121242809837242810048Ratregion
5501894MARC_16905-16906:1020714896:34581242844838242845295Ratregion
5047690RH1324721931242948688242948880Ratregion
5080990RH1419001921242969648242969839Ratregion
5084208AA893933921243092985243093076Ratregion
5081376AI0716341961243153141243153336Ratregion
5084146AI0131871961243169028243170446Ratregion
5048706RH1330581861243249590243249775Ratregion
37982D1Rat2232081243311415243311614Ratregion
5079870RH1412512081243399768243399975Ratregion
5505075Dmrt11501243518124243518273Ratregion
5506911G478682881243635838243636125Ratregion
5077162RH1395981891243712210243712398Ratregion
36219D1Rat3841651243737319243737466Ratregion
39560D1Rat3242021243853559243853760Ratregion
37902D1Rat1691391244401175244401301Ratregion
5088609AU0486712671244631248244631514Ratregion
5084034AA9434361211244657228244657348Ratregion
41882D1Rat4744321244686821244687239Ratregion
1635618D1Got3773351244974703244975032Ratregion
36960D1Rat761441244992467244992610Ratregion
502784309.MMHAP31FLC3.seq1511245266103245266253Ratregion
5070193RH945261081245268596245268701Ratregion
5027157WI-187461491245268658245268806Ratregion
5047072RH1321181971245273283245273479Ratregion
5029721BE0966852081245415536245415743Ratregion
5075418RH1385821401245415918245416057Ratregion
5073390RH1374082051245416321245416525Ratregion
5081769BE1181401501245482551245482700Ratregion
34009D1Mit341241245529606245529710Ratregion
5032781RH1352771941245800711245800903Ratregion
42530D1Rat4452251245840355245840558Ratregion
5029727BE1021131621245898149245898310Ratregion
43426D1Got2311101246115479246115588Ratregion
5504205BARC00732191246142301246142505Ratregion
43423D1Got2281191246226103246226218Ratregion
5028057Results_ER_8_28_95_2_42.seq1881246419369246419556Ratregion
5067658AU0476131361246544813246544948Ratregion
60224D1Got2292531246554654246554888Ratregion
5064842BF3998451741246956938246957111Ratregion
5064056BE1205731531247034958247035110Ratregion
5044302RH1305251841247036873247037056Ratregion
41392D1Rat3021591247065439247065599Ratregion
Position Markers

Flank 1: (D1Wox10)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21214,537,555 - 214,537,671 (-)MAPPER
Rnor_6.01236,763,415 - 236,763,528NCBI
Rnor_5.01244,066,294 - 244,066,407UniSTS
RGSC_v3.41220,639,539 - 220,639,653RGD
RGSC_v3.41220,639,540 - 220,639,653UniSTS
RGSC_v3.11220,803,562 - 220,803,676RGD
Celera1211,854,688 - 211,854,801UniSTS
RH 2.0 Map11183.9RGD
Cytogenetic Map1q43UniSTS
Flank 2: (D1Rat302)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21226,660,307 - 226,660,468 (+)MAPPER
Rnor_6.01247,065,439 - 247,065,599NCBI
Rnor_5.01254,305,181 - 254,305,341UniSTS
RGSC_v3.41232,579,831 - 232,579,992RGD
RGSC_v3.41232,579,832 - 232,579,992UniSTS
RGSC_v3.11232,743,855 - 232,744,015RGD
Celera1223,813,143 - 223,813,303UniSTS
RH 3.4 Map11608.6UniSTS
RH 3.4 Map11608.6RGD
SHRSP x BN Map1126.57UniSTS
SHRSP x BN Map1126.57RGD
Cytogenetic Map1q52UniSTS


QTLs in Region (Rnor_6.0)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1578780Cm52Cardiac mass QTL 523.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)182788437239853971Rat
731168Bp154Blood pressure QTL 1543.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1100131562236763528Rat
1354606Bp246Blood pressure QTL 2463.6arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)1108986301238830534Rat
7794788Mcs32Mammary carcinoma susceptibility QTL 322.61mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)1122614824262664716Rat
7421630Bp362Blood pressure QTL 3620.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1125875758262433692Rat
724562Rends1Renal damage susceptibility QTL 10.05kidney glomerulus integrity trait (VT:0010546)index of glomerular damage (CMO:0001135)1137787261236763528Rat
61341Bp26Blood pressure QTL 26arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1137787261236763528Rat
7771612Cm80Cardiac mass QTL 808.4heart left ventricle mass (VT:0007031)heart left ventricle weight (CMO:0000776)1144634295241482368Rat
737828Hcas3Hepatocarcinoma susceptibility QTL 34.9liver integrity trait (VT:0010547)liver tumorous lesion volume to total liver volume ratio (CMO:0001082)1156446196243311614Rat
2302378Insul11Insulin level QTL 113.25blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1156446196274977688Rat
724531Uae5Urinary albumin excretion QTL 54urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)1161321152273792054Rat
1578759Uae30Urinary albumin excretion QTL 303.30.003urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1161321256273791893Rat
1578778Pur4Proteinuria QTL 43.30.003total urine protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)1161321256273791893Rat
1354646Kidm18Kidney mass QTL 185.7kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1161784169278228889Rat
1354661Bw33Body weight QTL 335.2body mass (VT:0001259)body weight (CMO:0000012)1161784169278228889Rat
1354610Bw34Body weight QTL 344.1body mass (VT:0001259)body weight (CMO:0000012)1161784169278228889Rat
1358886Bp260Blood pressure QTL 2603.67arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1161784422246226103Rat
1549837Hcar15Hepatocarcinoma resistance QTL 150.05liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1163796316282763074Rat
2312420Pur17Proteinuria QTL 177.10.0001urine protein amount (VT:0005160)urine total protein excretion rate (CMO:0000756)1167394665238830534Rat
1354580Scort1Serum corticosterone level QTL 13.4blood corticosterone amount (VT:0005345)blood corticosterone level (CMO:0001172)1167394665278228889Rat
2292220Bp306Blood pressure QTL 3063.470.00087arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1174905700264802994Rat
738032Hcas5Hepatocarcinoma susceptibility QTL 53.12liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1191825895279986079Rat
1354652Kidm20Kidney mass QTL 204.3kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1192639698278228889Rat
1354624Cm35Cardiac mass QTL355.7heart left ventricle mass (VT:0007031)calculated heart weight (CMO:0000073)1192639698278228889Rat
631214Bw61Body weight QTL613.40.0001intramuscular adipose amount (VT:0010044)intramuscular fat area (CMO:0001162)1193220385238220385Rat
634321Hc1Hypercalciuria QTL 12.91urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)1193968438261264776Rat
1600380Niddm70Non-insulin dependent diabetes mellitus QTL 703.10.0008blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)1194554354239554354Rat
10059600Bp378Blood pressure QTL 3783.080.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1194872362239872362Rat
1600363Hc6Hypercalciuria QTL 62.7urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)1195598053265002735Rat
1578763Kidm29Kidney mass QTL 293.30.0001kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1196395041282763074Rat
1558658Bw59Body weight QTL 593.50.0003body mass (VT:0001259)body weight (CMO:0000012)1196738546241738546Rat
6903303Scl34Serum cholesterol QTL 342.50.0033blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)1197187728238220385Rat
737977Bp160Blood pressure QTL 1600.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1197963658242963658Rat
634312Bp143Blood pressure QTL 14330.0002arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1198446729240017341Rat
724559Pancm1Pancreatic morphology QTL 17.1islet of Langerhans morphology trait (VT:0005215)pancreatic islet damage composite score (CMO:0001156)1198585664236763415Rat
2293083Iddm25Insulin dependent diabetes mellitus QTL 254.18blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1198655722244992610Rat
1300145Rf7Renal function QTL 72.96urine creatinine amount (VT:0010540)urine creatinine level (CMO:0000125)1201146802241482368Rat
2312564Glom18Glomerulus QTL 182.40.003kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)1201358068252480016Rat
8655855Arrd3Age-related retinal degeneration QTL 33.07lens clarity trait (VT:0001304)cataract incidence/prevalence measurement (CMO:0001585)1202571665264802994Rat
8655655Arrd2Age-related retinal degeneration QTL 27.79retinal layer morphology trait (VT:0003727)percentage of study population developing retinopathy during a period of time (CMO:0002453)1202571665264802994Rat
631838Niddm36Non-insulin dependent diabetes mellitus QTL 360.01insulin secretion trait (VT:0003564)calculated pancreatic islet insulin release measurement (CMO:0001217)1205195290250195290Rat
1582206Kidm33Kidney mass QTL 336.9kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)1205603081244401301Rat
1358898Bp255Blood pressure QTL 2553.6arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1208517798266948272Rat
1358191Ept10Estrogen-induced pituitary tumorigenesis QTL 103.8pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)1210360774264802828Rat
8552891Epfw5Epididymal fat weight QTL 54.4epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)1210652654255652654Rat
634338Hcar4Hepatocarcinoma resistance QTL 44.6liver integrity trait (VT:0010547)liver tumorous lesion number to liver area ratio (CMO:0001210)1210960636236763528Rat
10059590Kidm44Kidney mass QTL 443.420.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)1210990171255990171Rat
1600388Niddm67Non-insulin dependent diabetes mellitus QTL 675.840.000004blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1213476630278978026Rat
1600395Niddm69Non-insulin dependent diabetes mellitus QTL 694.140.0002blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)1213476630278978026Rat
1600396Niddm68Non-insulin dependent diabetes mellitus QTL 684.970.0003blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1213476630278978026Rat
1600374Mcs17Mammary carcinoma susceptibility QTL 173mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)1215684498260684498Rat
1641926Teswt2Testicular weight QTL 22.82testis mass (VT:1000644)both testes wet weight (CMO:0000175)1215711860258765521Rat
2302375Bw83Body weight QTL 834.870.0002body mass (VT:0001259)body weight (CMO:0000012)1215711860260711860Rat
1298084Thym4Thymus enlargement QTL 410.68thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)1215828102260828102Rat
1357335Bw39Body weight QTL 393.3body mass (VT:0001259)body weight (CMO:0000012)1215828102260828102Rat
61376Bp42Blood pressure QTL 4223.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1215828102260828102Rat
1331790Bp201Blood pressure QTL 2013.127arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1216213318245529710Rat
631658Cm7Cardiac mass QTL 75.320.0001aorta mass (VT:0002845)aorta weight (CMO:0000076)1216324817261324817Rat
1358292Cm37Cardiac mass QTL 376.20.00000081heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)1216324817261324817Rat
634313Niddm43Non-insulin dependent diabetes mellitus QTL 43blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1217054291281795785Rat
2292218Kidm35Kidney mass QTL 35kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)1217372257244992610Rat
2300175Bmd40Bone mineral density QTL 4015.40.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)1221901238266901238Rat
2293655Bss36Bone structure and strength QTL 3610.660.0001femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)1221901238266901238Rat
2293674Bss39Bone structure and strength QTL 397.10.0001femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)1221901238266901238Rat
2293694Bss38Bone structure and strength QTL 387.050.0001femur strength trait (VT:0010010)femur stiffness (CMO:0001674)1221901238266901238Rat
7394701Uae46Urinary albumin excretion QTL 463.60.0056urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1221901238266901238Rat
10059587Bw173Body weight QTL 1733.230.025body mass (VT:0001259)body weight (CMO:0000012)1222492538267492538Rat
61403Niddm4Non-insulin dependent diabetes mellitus QTL 4blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)1225689973247836969Rat
1357399Bw45Body weight QTL 453.05body mass (VT:0001259)body mass index (BMI) (CMO:0000105)1225689973270689973Rat
1357404Bw42Body weight QTL 424.490.0001body mass (VT:0001259)body weight (CMO:0000012)1225689973270689973Rat
1600397Edcs4Endometrial carcinoma susceptibility QTL 42.2uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)1226706329271706329Rat
1300168Bp170Blood pressure QTL 1702.76arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1227107736249206417Rat
8693661Alc34Alcohol consumption QTL 342.20.611drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)1227509470249252048Rat
8693618Alc25Alcohol consumption QTL 2530.28drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)1227509470249252048Rat
8693637Alc29Alcohol consumption QTL 292.70.258drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)1227509470255131140Rat
1358916Kidm22Kidney mass QTL 223.32kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)1230420627262031693Rat
1358890Bp259Blood pressure QTL 2593.06arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1230420627282645769Rat
2292216Bw80Body weight QTL 803.230.0019body mass (VT:0001259)body weight (CMO:0000012)1233490105264802994Rat
724538Kidm1Kidney mass QTL 13.2kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1233663100273792054Rat
734768Niddm59Non-insulin dependent diabetes mellitus QTL 59body mass (VT:0001259)body weight (CMO:0000012)1235850810280850810Rat
2302040Pia35Pristane induced arthritis QTL 353.80.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)1236265430281265430Rat
61327Eae7Experimental allergic encephalomyelitis QTL 75.6body mass (VT:0001259)change in body weight (CMO:0002045)1236265430281265430Rat
634340Hcar5Hepatocarcinoma resistance QTL 58liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1236763415247065599Rat
61455Niddm7Non-insulin dependent diabetes mellitus QTL 75.5blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)1236763415258766873Rat
70211Niddm24Non-insulin dependent diabetes mellitus QTL 243.79blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1236795785281795785Rat
1549910Bw54Body weight QTL 540.05body mass (VT:0001259)body weight (CMO:0000012)1236795785281795785Rat
5508828Leukc3Leukocyte quantity QTL 3eosinophil quantity (VT:0002602)blood eosinophil count (CMO:0000033)1238220189244401301Rat
1598821Rf55Renal function QTL 556.3renal blood flow trait (VT:2000006)ratio of change in renal blood flow to change in renal perfusion pressure (CMO:0001239)1238824734279986079Rat
61400Niddm1Non-insulin dependent diabetes mellitus QTL 111blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1238830408266793958Rat
724533Rf51Renal function QTL 515.30.0002kidney plasma flow trait (VT:0005524)renal plasma flow (CMO:0001914)1238830534278228767Rat
731175Uae20Urinary albumin excretion QTL 203.50.0018urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1241482188281795785Rat
10053715Scort24Serum corticosterone level QTL 242.130.0088blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)1242302911282763074Rat
724552Glom2Glomerulus QTL 23.30.0001kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli directly contacting the kidney surface (CMO:0001001)1243272341282763074Rat
1600392Bw123Body weight QTL 1230.001body mass (VT:0001259)body weight (CMO:0000012)1244087148282763074Rat
7387289Uae45Urinary albumin excretion QTL 452.860.0021urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1244148899282763074Rat
2293700Bmd27Bone mineral density QTL 276.60.0001femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)1244401175264636028Rat
2293701Bmd34Bone mineral density QTL 348.30.0001femur strength trait (VT:0010010)femoral neck ultimate force (CMO:0001703)1244401175264636028Rat
631843Bw116Body weight QTL 1164.10.016abdominal adipose amount (VT:1000220)abdominal fat pad weight (CMO:0000088)1244401175282365384Rat
734767Niddm57Non-insulin dependent diabetes mellitus QTL 57body mass (VT:0001259)body weight (CMO:0000012)1244401175282365384Rat
734769Niddm58Non-insulin dependent diabetes mellitus QTL 58body mass (VT:0001259)body weight (CMO:0000012)1244992467282365384Rat
6480786Bw97Body weight QTL 975.03body mass (VT:0001259)body weight (CMO:0000012)1245529606248013094Rat
631215Stl8Serum triglyceride level QTL 89.270.0001blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)1245529606282763074Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Hcar5


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2006-04-14 Hcar5  Hepatocarcinoma resistance QTL 5  Hcr5    Symbol updated 1299863 APPROVED

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general this peak was also observed for GST-P mRNA levels at 20 weeks of 3'-Me-DAB treatment 625382