CSGALNACT1 (chondroitin sulfate N-acetylgalactosaminyltransferase 1) - Rat Genome Database

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Gene: CSGALNACT1 (chondroitin sulfate N-acetylgalactosaminyltransferase 1) Homo sapiens
Analyze
Symbol: CSGALNACT1
Name: chondroitin sulfate N-acetylgalactosaminyltransferase 1
RGD ID: 1601858
HGNC Page HGNC
Description: Enables hexosyltransferase activity. Involved in chondroitin sulfate proteoglycan biosynthetic process and nucleotide-sugar metabolic process. Predicted to be located in Golgi membrane.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: beta4GalNAcT; beta4GalNAcT-1; ChGn; ChGn-1; chondroitin beta-1,4-N-acetylgalactosaminyltransferase 1; chondroitin beta1,4 N-acetylgalactosaminyltransferase; CSGalNAcT-1; FLJ11264; FLJ13760; glucuronylgalactosylproteoglycan 4-beta-N- acetylgalactosaminyltransferase; SDJLABA
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl819,404,161 - 19,758,029 (-)EnsemblGRCh38hg38GRCh38
GRCh38819,404,161 - 19,757,908 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37819,261,672 - 19,615,419 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36819,305,952 - 19,584,374 (-)NCBINCBI36hg18NCBI36
Celera818,225,010 - 18,503,692 (-)NCBI
Cytogenetic Map8p21.3NCBI
HuRef817,801,989 - 18,080,455 (-)NCBIHuRef
CHM1_1819,463,117 - 19,741,804 (-)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:11514575   PMID:11788602   PMID:12163485   PMID:12446672   PMID:12477932   PMID:12975309   PMID:14702039   PMID:15489334   PMID:16344560   PMID:17145758   PMID:19298595   PMID:19701759  
PMID:19730683   PMID:20379614   PMID:20812917   PMID:21148564   PMID:21160489   PMID:21284936   PMID:21873635   PMID:21890453   PMID:22076801   PMID:22156920   PMID:22939629   PMID:23726668  
PMID:23748413   PMID:23774590   PMID:23811343   PMID:24280246   PMID:25123227   PMID:25201988   PMID:25445787   PMID:25555482   PMID:25923053   PMID:26186194   PMID:26806424   PMID:27367046  
PMID:27428423   PMID:27599773   PMID:27655130   PMID:28159857   PMID:28514442   PMID:28514734   PMID:28649518   PMID:32296183   PMID:33845483  


Genomics

Comparative Map Data
CSGALNACT1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl819,404,161 - 19,758,029 (-)EnsemblGRCh38hg38GRCh38
GRCh38819,404,161 - 19,757,908 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37819,261,672 - 19,615,419 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36819,305,952 - 19,584,374 (-)NCBINCBI36hg18NCBI36
Celera818,225,010 - 18,503,692 (-)NCBI
Cytogenetic Map8p21.3NCBI
HuRef817,801,989 - 18,080,455 (-)NCBIHuRef
CHM1_1819,463,117 - 19,741,804 (-)NCBICHM1_1
Csgalnact1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39868,809,433 - 69,188,270 (-)NCBIGRCm39mm39
GRCm39 Ensembl868,809,433 - 69,187,798 (-)Ensembl
GRCm38868,356,781 - 68,735,621 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl868,356,781 - 68,735,146 (-)EnsemblGRCm38mm10GRCm38
MGSCv37870,880,682 - 71,259,041 (-)NCBIGRCm37mm9NCBIm37
MGSCv36871,285,783 - 71,664,123 (-)NCBImm8
Celera870,901,764 - 71,270,170 (-)NCBICelera
Cytogenetic Map8B3.3NCBI
Csgalnact1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21620,995,210 - 21,330,586 (+)NCBImRatBN7.2
Rnor_6.0 Ensembl1622,979,444 - 23,074,798 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01622,704,318 - 23,075,071 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01622,733,680 - 22,963,531 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41622,852,516 - 22,947,139 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11622,852,484 - 22,946,543 (+)NCBI
Celera1621,395,359 - 21,488,688 (+)NCBICelera
Cytogenetic Map16p14NCBI
Csgalnact1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540343,178,520 - 43,478,885 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540343,178,520 - 43,347,121 (-)NCBIChiLan1.0ChiLan1.0
CSGALNACT1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1815,576,416 - 15,929,342 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl815,576,416 - 15,904,123 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0818,626,998 - 18,980,416 (-)NCBIMhudiblu_PPA_v0panPan3
CSGALNACT1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11622,219,324 - 22,546,501 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1622,219,861 - 22,392,937 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1622,724,714 - 23,051,863 (-)NCBI
ROS_Cfam_1.01623,960,246 - 24,287,450 (-)NCBI
UMICH_Zoey_3.11622,317,927 - 22,427,544 (-)NCBI
UNSW_CanFamBas_1.01622,903,836 - 23,231,159 (-)NCBI
UU_Cfam_GSD_1.01622,955,384 - 23,282,687 (-)NCBI
Csgalnact1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494314,762,965 - 14,931,054 (+)NCBI
SpeTri2.0NW_0049365553,639,459 - 3,807,483 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CSGALNACT1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11712,145,141 - 12,498,777 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21710,059,885 - 10,154,331 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CSGALNACT1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1817,494,312 - 17,851,497 (-)NCBI
ChlSab1.1 Ensembl817,494,187 - 17,695,037 (-)Ensembl
Vero_WHO_p1.0NW_02366605224,650,059 - 24,756,656 (+)NCBI
Csgalnact1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462475815,200,726 - 15,517,146 (-)NCBI

Position Markers
RH68573  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37819,317,990 - 19,318,177UniSTSGRCh37
Build 36819,362,270 - 19,362,457RGDNCBI36
Celera818,281,407 - 18,281,594RGD
Cytogenetic Map8p21.3UniSTS
HuRef817,858,399 - 17,858,586UniSTS
GeneMap99-GB4 RH Map880.52UniSTS
G32206  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37819,493,905 - 19,494,208UniSTSGRCh37
Build 36819,538,185 - 19,538,488RGDNCBI36
Celera818,457,221 - 18,457,524RGD
Cytogenetic Map8p21.3UniSTS
HuRef818,034,187 - 18,034,490UniSTS
RH103012  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37819,261,869 - 19,262,050UniSTSGRCh37
Build 36819,306,149 - 19,306,330RGDNCBI36
Celera818,225,207 - 18,225,388RGD
Cytogenetic Map8p21.3UniSTS
HuRef817,802,186 - 17,802,367UniSTS
GeneMap99-GB4 RH Map882.04UniSTS
SHGC-78756  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37819,434,446 - 19,434,745UniSTSGRCh37
Build 36819,478,726 - 19,479,025RGDNCBI36
Celera818,397,796 - 18,398,095RGD
Cytogenetic Map8p21.3UniSTS
HuRef817,974,770 - 17,975,069UniSTS
TNG Radiation Hybrid Map810195.0UniSTS
D8S1643  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37819,368,676 - 19,368,776UniSTSGRCh37
Build 36819,412,956 - 19,413,056RGDNCBI36
Celera818,332,010 - 18,332,110RGD
Cytogenetic Map8p21.3UniSTS
Whitehead-RH Map888.9UniSTS
Whitehead-YAC Contig Map8 UniSTS
AFMA125YC5  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37819,387,780 - 19,387,886UniSTSGRCh37
Build 36819,432,060 - 19,432,166RGDNCBI36
Celera818,351,130 - 18,351,236RGD
Cytogenetic Map8p21.3UniSTS
HuRef817,928,070 - 17,928,176UniSTS
WI-21956  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37819,328,933 - 19,329,202UniSTSGRCh37
Build 36819,373,213 - 19,373,482RGDNCBI36
Celera818,292,350 - 18,292,619RGD
Cytogenetic Map8p21.3UniSTS
HuRef817,869,284 - 17,869,553UniSTS
GeneMap99-GB4 RH Map885.37UniSTS
Whitehead-RH Map875.5UniSTS
D10S16   No map positions available.
D11S2560  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map10p12.1-p11.2UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map12p13.3UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map8q21.13UniSTS
Cytogenetic Map18p11.22UniSTS
Cytogenetic Map9p13.3-p12UniSTS
Cytogenetic Map10p12.1UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map5q23.3UniSTS
Cytogenetic Map15q21.1UniSTS
Cytogenetic Map14q24.2UniSTS
Cytogenetic Map15q13UniSTS
Cytogenetic Map6q25.3UniSTS
Cytogenetic Map8p22-p21UniSTS
Cytogenetic Map1p34.1UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map15q21.3UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map2p13.1UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map10q24.2UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map6q16.2UniSTS
Cytogenetic MapXq26.3UniSTS
Cytogenetic Map9q22.33UniSTS
Cytogenetic Map7q21.2UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map8q24.13UniSTS
Cytogenetic Map4q25UniSTS
Cytogenetic Map12p13.33UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map5q23UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map3p21.2UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map1p13.2UniSTS
Cytogenetic Map6q27UniSTS
Cytogenetic Map2p13.3UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map2q12.1UniSTS
Cytogenetic Map9q13-q21UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map8q11.21UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic Map1p36.21UniSTS
Cytogenetic Map12q23-q24.1UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map10q23.2UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map9q34.2UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map1p32UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map7p15.2UniSTS
Cytogenetic Map12p13.2UniSTS
Cytogenetic Map16q12.2UniSTS
Cytogenetic Map3q26.2-q27UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic Map8p23.1UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic MapXp11.2UniSTS
Cytogenetic Map20q11.2UniSTS
Cytogenetic Map3q26.2UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map4p15.32UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map10p13UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map1p36.11-p34.2UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map18p11.32UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map8q22.1UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map3p21UniSTS
Cytogenetic Map14q13.2UniSTS
Cytogenetic Map8q12.1UniSTS
Cytogenetic Map3p22.3UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map13q12.11UniSTS
Cytogenetic Map12p12UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map14q31.1UniSTS
Cytogenetic Map21q22.2UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map18q12.3UniSTS
Cytogenetic Map12q13.3UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map8q24.21UniSTS
Cytogenetic Map12q22-q23.1UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map1q23UniSTS
Cytogenetic Map11p15.1UniSTS
Cytogenetic Map7q32UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map5p13.1UniSTS
Cytogenetic Map18q21UniSTS
Cytogenetic Map7p14-p13UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map19p13.3-p13.2UniSTS
Cytogenetic Map6q22-q23UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map11q13.1-q13.3UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map6p24UniSTS
Cytogenetic Map10q25UniSTS
Cytogenetic Map8q22.3UniSTS
Cytogenetic Map2p14UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map6q13UniSTS
Cytogenetic Map2p25.2UniSTS
Cytogenetic Map1p31.1UniSTS
Cytogenetic Map15q14-q15UniSTS
Cytogenetic Map9q31.1UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic Map1p36.32UniSTS
Cytogenetic Map15q11.2UniSTS
Cytogenetic Map12p12.1UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic MapXq28UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map8p21.1UniSTS
Cytogenetic Map3p26.1-p25.1UniSTS
Cytogenetic Map6q16.3UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic MapXq27.1UniSTS
Cytogenetic Map3q12.3UniSTS
Cytogenetic Map3q25.31UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map1q42.3UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map12q13.12UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map4q31.1UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map9q33.2UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map8q12UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map17q24.3UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map10q24.32UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map14q32.32UniSTS
Cytogenetic Map16p13.2UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map10q11.22UniSTS
Cytogenetic Map1p34UniSTS
Cytogenetic Map6q14.1UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map1p36.3-p36.2UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map1p32-p31UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map5q33.1UniSTS
Cytogenetic Map2q21.1UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic Map10q26.11UniSTS
Cytogenetic Map12q14.3UniSTS
Cytogenetic Map5q34UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map15q24UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map12q21UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map1p35-p34UniSTS
Cytogenetic Map9q34.1UniSTS
Cytogenetic Map9q22.2UniSTS
Cytogenetic MapXp22UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map2q33UniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map20q13.31UniSTS
Cytogenetic Map3p25.2UniSTS
Cytogenetic Map5q11UniSTS
D16S325  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map9q34.13UniSTS
Cytogenetic Map9q22.33UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map4q21.1UniSTS
Cytogenetic Map6q25.3UniSTS
Cytogenetic Map2q32.3UniSTS
Cytogenetic Map6q22UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map17q21.2-q21.3UniSTS
Cytogenetic Map13q14.3UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map2q33.3UniSTS
Cytogenetic Map20q13.32UniSTS
Cytogenetic Map1p21.2UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map12q13.2UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map12p13.32UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map8q22.3UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic Map1p13.1UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map4q25UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map7p22.2UniSTS
Cytogenetic Map7q33UniSTS
Cytogenetic Map1p31.3UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map6q13UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map10q11.2UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map3q13.32UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map6p22.3UniSTS
Cytogenetic Map12q22UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map3q22.1UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map6q25.2-q25.3UniSTS
Cytogenetic Map1p36.1UniSTS
Cytogenetic Map22q11.2UniSTS
Cytogenetic Map3q26.31UniSTS
Cytogenetic Map7p12.3UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map5p12UniSTS
Cytogenetic Map9q21.13UniSTS
Cytogenetic Map17q21.33UniSTS
Cytogenetic Map20p12.3-p11.21UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map2p13-p12UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map8q21.13UniSTS
Cytogenetic Map7q32.1UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map17q22UniSTS
Cytogenetic Map3p24.2UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic MapXp22.33UniSTS
Cytogenetic MapYp11.32UniSTS
Cytogenetic Map10q24.31UniSTS
Cytogenetic Map4q34.3UniSTS
Cytogenetic Map10p11.23UniSTS
Cytogenetic Map10p15.1UniSTS
Cytogenetic Map14q21.2UniSTS
Cytogenetic Map6p21.31UniSTS
Cytogenetic Map9p24.1-p23UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map10pter-q25.3UniSTS
Cytogenetic Map6q25.2-q27UniSTS
Cytogenetic Map15q26.3UniSTS
Cytogenetic Map15q14UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map1q21.2UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map11p11.2UniSTS
Cytogenetic Map17q21.32UniSTS
Cytogenetic Map11p15.5UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map7p21.1UniSTS
Cytogenetic Map17q23.2UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map1p36.3-p34.3UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map4p15.2UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map2q24.3UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic Map6q27UniSTS
Cytogenetic Map12q14.3UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map15q11.2UniSTS
Cytogenetic Map6p21.33UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map2q12.2UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map3p26UniSTS
Cytogenetic MapXq28UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map10q21-q22UniSTS
Cytogenetic Map5q22UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map12q14.2UniSTS
Cytogenetic Map11q22.3UniSTS
Cytogenetic Map10q26.11UniSTS
Cytogenetic Map10q25.3UniSTS
Cytogenetic Map6q22.32UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic Map12q23.3UniSTS
Cytogenetic Map3q21UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map7q36UniSTS
Cytogenetic Map4q26UniSTS
Cytogenetic Map19qterUniSTS
Cytogenetic Map7p13-p12UniSTS
Cytogenetic Map2p22UniSTS
Cytogenetic Map2q14.3UniSTS
Cytogenetic Map19q13.4UniSTS
D1S1425  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map1p33UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map1p31.3UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map6q25.3UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map2p13.1UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map4q21.23UniSTS
Cytogenetic Map22q12.1UniSTS
Cytogenetic Map8q24.13UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map1q23.1UniSTS
Cytogenetic Map10q22UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map10p14UniSTS
Cytogenetic Map6p21.33UniSTS
Cytogenetic Map10q26.3UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map7p22.2UniSTS
Cytogenetic Map12q13.12UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic Map14q32.12UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map18p11.31UniSTS
Cytogenetic Map13q34UniSTS
Cytogenetic Map4p14UniSTS
Cytogenetic Map8p23.1UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map8q12.1UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map10p12UniSTS
Cytogenetic Map12q13UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map8q24UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map1q21.2UniSTS
Cytogenetic Map3q26.2UniSTS
Cytogenetic Map6q25.2-q25.3UniSTS
Cytogenetic Map20q11.2-q13.2UniSTS
Cytogenetic Map12q13.3UniSTS
Cytogenetic Map1q21-q23UniSTS
Cytogenetic Map17q21.32UniSTS
Cytogenetic Map1p35.3UniSTS
Cytogenetic Map1p12UniSTS
Cytogenetic Map2p23-p22UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map16q12.1UniSTS
Cytogenetic Map17q22-q23UniSTS
Cytogenetic Map2p11.1UniSTS
Cytogenetic Map16q12.2UniSTS
Cytogenetic Map2p12-p11.2UniSTS
Cytogenetic Map3q11.1UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic Map17q11.2-q12UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map1p32-p31UniSTS
Cytogenetic Map1p21.3UniSTS
Cytogenetic Map1q32.2UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map7q21-q22UniSTS
Cytogenetic Map1q25.3UniSTS
Cytogenetic Map18p11.3-p11.2UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map21p11.1UniSTS
Cytogenetic Map12q24.31-q24.32UniSTS
Cytogenetic Map9q33.2UniSTS
Cytogenetic Map11q13.5UniSTS
Cytogenetic Map12p12.2-p11.2UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map2q14.3UniSTS
Cytogenetic Map19p13.3-p13.2UniSTS
Cytogenetic Map7q32.1UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map17q22-q23.2UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map4q21.21UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map14q24.2UniSTS
Cytogenetic Map20q13.33UniSTS
Cytogenetic Map3p21UniSTS
Cytogenetic Map10p11.23UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic Map18q12.1UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map15q23UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map13q12.11UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map3q21.1UniSTS
Cytogenetic Map12p12UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic MapXq12-q13UniSTS
Cytogenetic Map22q11.2UniSTS
Cytogenetic Map7q31.1-q31.3UniSTS
Cytogenetic MapXp22.11UniSTS
Cytogenetic Map3p21.1-p14.2UniSTS
Cytogenetic Map2p24UniSTS
Cytogenetic Map20p12.1UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map12q13.11-q14.3UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map9q21.33UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic MapXq13-q21UniSTS
Cytogenetic Map8q24.22UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map6q25.2-q27UniSTS
Cytogenetic Map12q24.32UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic MapXq13.1UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map14q12UniSTS
Cytogenetic Map12q23-q24.1UniSTS
Cytogenetic Map4q35.1UniSTS
Cytogenetic Map17q24.1UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map14q21UniSTS
Cytogenetic Map9p24.3UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map2p14UniSTS
Cytogenetic Map21q22.2UniSTS
Cytogenetic Map2q12.3UniSTS
Cytogenetic Map8p21.1UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map1p34UniSTS
Cytogenetic Map19p13.1UniSTS
Cytogenetic Map5q14.1UniSTS
Cytogenetic MapXq22.3UniSTS
Cytogenetic Map7p21.1UniSTS
Cytogenetic Map6p25.2UniSTS
Cytogenetic Map10q23.33UniSTS
Cytogenetic Map15q11-q12UniSTS
Cytogenetic Map3p22.2UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map15q21.1-q21.2UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map4q13.3UniSTS
Cytogenetic Map19p13.13UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map17q24.3UniSTS
Cytogenetic Map12p13.33UniSTS
Cytogenetic Map11q14.1UniSTS
Cytogenetic Map3p22-p21.3UniSTS
Cytogenetic Map16q22.3UniSTS
Cytogenetic Map1p22.1UniSTS
Cytogenetic Map6p12.1UniSTS
Cytogenetic Map19q13.33-q13.41UniSTS
Cytogenetic Map2p25.3UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map5p12UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map7q35UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map7q11.1UniSTS
Cytogenetic Map2p25.1-p24.1UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map4q31.21UniSTS
Cytogenetic Map5p13.1UniSTS
Cytogenetic MapXq22.1UniSTS
Cytogenetic Map9q21.11UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map1p22.2UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map12q24UniSTS
Cytogenetic MapXq24UniSTS
Cytogenetic Map1q24.2UniSTS
Cytogenetic Map22q13.31UniSTS
Cytogenetic Map8p11.23UniSTS
Cytogenetic Map1q23.3UniSTS
Cytogenetic Map16p12UniSTS
Cytogenetic Map10p15-p14UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map1q22-q23UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map7q31UniSTS
Cytogenetic Map10q26UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map6p22.3UniSTS
Cytogenetic Map6p21.2UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic MapXq28UniSTS
Cytogenetic Map1p33-p32UniSTS
Cytogenetic Map5q35.2UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map12q24.33UniSTS
Cytogenetic Map3q26.1-q26.2UniSTS
Cytogenetic Map12p13UniSTS
Cytogenetic Map7q36.1UniSTS
Cytogenetic Map8p11.21UniSTS
Cytogenetic Map12q13.1-q13.2UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map16p12.3UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map9p13.2UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map3q13.2UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map1q42.3UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map20q11.21UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map12q14.3UniSTS
Cytogenetic Map6q15UniSTS
Cytogenetic Map6q22.32UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map16p13.11UniSTS
Cytogenetic Map10q24.32UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map18q11.1UniSTS
Cytogenetic Map16q23.2UniSTS
Cytogenetic Map3q12.1UniSTS
Cytogenetic Map15q24-q25UniSTS
Cytogenetic Map7q31.1UniSTS
Cytogenetic Map15q26.1UniSTS
Cytogenetic Map8q13.1UniSTS
Cytogenetic Map6pter-p12.1UniSTS
Cytogenetic Map6q16UniSTS
Cytogenetic Map12q14.1UniSTS
Cytogenetic Map17q21.2UniSTS
Cytogenetic Map9q22.2UniSTS
Cytogenetic Map17q23.2UniSTS
Cytogenetic Map11q23.1-q23.2UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map4q23UniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map11q24.3UniSTS
Cytogenetic Map7p14UniSTS
Cytogenetic Map15q24.1UniSTS
Cytogenetic Map16q24.2UniSTS
Cytogenetic Map12q13.11UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map8q22.1UniSTS
Cytogenetic Map6q16.2UniSTS
Cytogenetic Map5p15.2UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map14q22.3UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map12q13.2UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map5q23.3-q31.1UniSTS
Cytogenetic Map1p36UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map12p13.31UniSTS
Cytogenetic Map3q12.3UniSTS
Cytogenetic Map11q23UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map20q11UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map5q23.3UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map1q42UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map12q24.13UniSTS
Cytogenetic Map3q27.3UniSTS
Cytogenetic Map14q21.3UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map17q22UniSTS
Cytogenetic Map20q13.32UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic MapXq21.1UniSTS
D10S16  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map3p24.2UniSTS
Cytogenetic Map21q21.3UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic Map5q23.3-q31.1UniSTS
Cytogenetic Map7q32UniSTS
Cytogenetic Map1q21-q23UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map2q11.2-q12UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map1p36.21UniSTS
Cytogenetic Map3p22UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map2p12UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map9p13.3-p12UniSTS
Cytogenetic Map3p21.1UniSTS
Cytogenetic Map5p13.1UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map2p25.2UniSTS
Cytogenetic Map5q21-q22UniSTS
Cytogenetic Map2p22.1UniSTS
Cytogenetic Map1q32.3UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map18q12UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map3q27.3UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map20q13.32UniSTS
Cytogenetic Map10q26UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map7q21.13UniSTS
Cytogenetic Map1p33UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map9q22.3UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map12q13.2UniSTS
Cytogenetic Map22q13.31-q13.33UniSTS
Cytogenetic Map1q24.1UniSTS
Cytogenetic Map7q32.2UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map1q42.11UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map19p13.1UniSTS
Cytogenetic Map11q13.5UniSTS
Cytogenetic Map11q24UniSTS
Cytogenetic Map2q11.2-q12.1UniSTS
Cytogenetic Map3q21.2UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map8p11.21UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map20q12UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map17q22.2UniSTS
Cytogenetic Map18q21UniSTS
Cytogenetic Map11q14.2UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map4q34UniSTS
Cytogenetic Map2p22-p21UniSTS
Cytogenetic Map10q26.3UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map1p36.23UniSTS
Cytogenetic Map7p22.2UniSTS
Cytogenetic Map12q24.13UniSTS
Cytogenetic Map8p21.2UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map14q32.12UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic MapXq26.3UniSTS
Cytogenetic Map8p23.1UniSTS
Cytogenetic Map6q13UniSTS
Cytogenetic Map3p21.31UniSTS
Cytogenetic Map9p13.2UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map9q22.2UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map13q12.11UniSTS
Cytogenetic Map16p13.13UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map7q22UniSTS
Cytogenetic Map3q21UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map22q13UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map11p15.3-p15.1UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map7p22.3UniSTS
Cytogenetic Map3p21UniSTS
Cytogenetic MapXp22.3UniSTS
Cytogenetic Map1q42.3UniSTS
Cytogenetic Map18q11.2UniSTS
Cytogenetic Map6p24.3UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map1q25UniSTS
Cytogenetic Map15q11.2UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map3q26UniSTS
Cytogenetic Map12p12.1-p11.2UniSTS
Cytogenetic Map11q23.1UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map7p15.2UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map10q11.22UniSTS
Cytogenetic Map5p12UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map9q21.13UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic MapXq23UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic Map22q11.1UniSTS
Cytogenetic Map16q13UniSTS
Cytogenetic Map16pUniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic MapXp11.3UniSTS
Cytogenetic Map1q25.1UniSTS
Cytogenetic Map10q23-q24UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map7q31UniSTS
Cytogenetic Map6q23.3UniSTS
Cytogenetic MapXp22.2UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map20q11.22UniSTS
Cytogenetic Map4q35.1UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map6q25.1UniSTS
Cytogenetic Map14q24.1UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map14q23.2UniSTS
Cytogenetic Map15q24.1UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map8q23.1UniSTS
Cytogenetic Map2q14.3UniSTS
Cytogenetic Map20q13.33UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map5p15.1UniSTS
Cytogenetic Map15q13.1UniSTS
Cytogenetic Map15q26.1UniSTS
Cytogenetic Map7q32.1UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map1p31.1UniSTS
Cytogenetic Map17qterUniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map12q22UniSTS
Cytogenetic Map16q22.2UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic MapXp22.33UniSTS
Cytogenetic MapYp11.32UniSTS
Cytogenetic Map14q24.2UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map13q34UniSTS
Cytogenetic Map10p11.23UniSTS
Cytogenetic Map15q15.2UniSTS
Cytogenetic Map8p21.1UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map15q22.2UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map6p21.31UniSTS
Cytogenetic Map10q23.1UniSTS
Cytogenetic Map1p36.2UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map22q11.2UniSTS
Cytogenetic Map17q23.3UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map20q12-q13.12UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map5q31.2-q34UniSTS
Cytogenetic Map5q31.2UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic MapXq13-q21UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map1pter-q31.3UniSTS
Cytogenetic Map15q21.1UniSTS
Cytogenetic Map3q13.33UniSTS
Cytogenetic MapXq13.1UniSTS
Cytogenetic Map3p23-p21UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map1p34.1UniSTS
Cytogenetic Map2q21.1UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map17q21.33UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map10q11.21UniSTS
Cytogenetic Map16q22UniSTS
Cytogenetic Map2q24UniSTS
Cytogenetic Map1q23.3UniSTS
Cytogenetic Map3q13.13UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map16p13.1UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic MapXp22.12UniSTS
Cytogenetic Map9q21.33UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map16q11.2UniSTS
Cytogenetic Map10p12.31UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map8q21.2UniSTS
Cytogenetic Map10q26.13UniSTS
Cytogenetic Map10q25.3UniSTS
Cytogenetic Map15q14-q15UniSTS
Cytogenetic Map8p11.2UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map4p15.2UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map7p21.1UniSTS
Cytogenetic Map1p36.32UniSTS
Cytogenetic Map1p36.1-p34UniSTS
Cytogenetic Map4p13UniSTS
Cytogenetic Map7q31.1-q31.2UniSTS
Cytogenetic Map8q22.2UniSTS
Cytogenetic Map15q21.1-q21.2UniSTS
Cytogenetic Map16q21UniSTS
Cytogenetic MapXq12UniSTS
Cytogenetic Map7q36.1UniSTS
Cytogenetic Map7p14.1UniSTS
Cytogenetic Map6p23UniSTS
Cytogenetic Map3p11.1UniSTS
Cytogenetic Map15q21.3UniSTS
Cytogenetic Map13q12UniSTS
Cytogenetic Map12q23.2UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map16q22.3UniSTS
Cytogenetic MapXq21UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic Map4q25UniSTS
Cytogenetic Map3q22.1UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic Map11q14.3UniSTS
Cytogenetic Map10q21.3UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map15q24.2UniSTS
Cytogenetic Map2p14UniSTS
Cytogenetic Map7q11.1UniSTS
Cytogenetic Map6p21UniSTS
Cytogenetic Map2p25.1-p24.1UniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map4q13.3UniSTS
Cytogenetic Map12p11.21UniSTS
Cytogenetic Map18q21.3UniSTS
Cytogenetic Map17p13UniSTS
Cytogenetic Map8q12UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map21q22.13UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map17q24.3UniSTS
Cytogenetic Map1p21UniSTS
Cytogenetic MapXq24UniSTS
Cytogenetic Map2q34UniSTS
Cytogenetic Map8p11.23UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map9q33.3UniSTS
Cytogenetic Map16p12UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map12q15UniSTS
Cytogenetic Map2q12.2UniSTS
Cytogenetic Map8p12UniSTS
Cytogenetic Map7q22.3UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map4q35UniSTS
Cytogenetic Map19q13.1-q13.2UniSTS
Cytogenetic Map16p13.12UniSTS
Cytogenetic Map9q34.1UniSTS
Cytogenetic Map7q36.2UniSTS
Cytogenetic Map3p23UniSTS
Cytogenetic Map6p25UniSTS
Cytogenetic Map9q22.1-q22.2UniSTS
Cytogenetic Map3q26.1-q26.2UniSTS
Cytogenetic Map5q31-q34UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map12p13UniSTS
Cytogenetic Map4q26UniSTS
Cytogenetic Map4p15.3UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map1p32-p31UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map3q13.2UniSTS
Cytogenetic Map2q33.3UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map18q21.32UniSTS
Cytogenetic Map15q26.3UniSTS
Cytogenetic Map12q14.2UniSTS
Cytogenetic Map2q31.1-q31.2UniSTS
Cytogenetic Map12q13.11UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map6p12.3UniSTS
Cytogenetic Map6q22.32UniSTS
Cytogenetic Map5q15UniSTS
Cytogenetic Map3p14.2UniSTS
Cytogenetic Map3p25.1UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map2q37UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map4q23UniSTS
Cytogenetic Map16q24.3UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map10q22.1UniSTS
Cytogenetic Map18q11.1UniSTS
Cytogenetic Map16q23.2UniSTS
Cytogenetic Map12q13UniSTS
Cytogenetic Map18q21.1UniSTS
Cytogenetic Map12q12-q13UniSTS
Cytogenetic Map9p22.3UniSTS
Cytogenetic Map6p21.2UniSTS
Cytogenetic Map6p22.1UniSTS
Cytogenetic Map11p15.1UniSTS
Cytogenetic Map19qterUniSTS
Cytogenetic Map20q13.3-qterUniSTS
Cytogenetic Map12q14.1UniSTS
Cytogenetic Map7p11UniSTS
Cytogenetic Map7p15UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map16p12.3UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map17pUniSTS
Cytogenetic Map11p14.1UniSTS
Cytogenetic Map2p13.2UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map13q22.1UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic Map14q23.3UniSTS
Cytogenetic Map3q26.2UniSTS

miRNA Target Status

Confirmed Target Of
miRNA GeneMature miRNAMethod NameResult TypeData TypeSupport TypePMID
MIR126hsa-miR-126-5pMirtarbaseexternal_infoCLASHFunctional MTI (Weak)23622248

Predicted Target Of
Summary Value
Count of predictions:5820
Count of miRNA genes:1200
Interacting mature miRNAs:1523
Transcripts:ENST00000311540, ENST00000332246, ENST00000397998, ENST00000454498, ENST00000517494, ENST00000517651, ENST00000518542, ENST00000519222, ENST00000520003, ENST00000522573, ENST00000522732, ENST00000522854, ENST00000523227, ENST00000523262, ENST00000523919, ENST00000524112, ENST00000524213, ENST00000544602
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component
High
Medium 644 1510 820 52 415 21 1808 661 1630 143 615 1149 34 962 1095 2
Low 1745 1463 890 558 1172 430 2388 1498 2067 255 799 410 135 242 1686 2
Below cutoff 22 14 12 11 245 11 159 26 22 12 34 29 5 1 7 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001130518 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001354475 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001354476 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001354477 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001354480 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001354481 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001354483 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001354484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001354485 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001354487 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001354488 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001354489 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001354490 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001354491 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001354492 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001354494 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001354495 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001354496 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001354497 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001354498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001354499 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_018371 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_024040 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_148897 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_148898 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_148899 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_148900 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_148901 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_148902 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006716360 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006716363 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006716364 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011544578 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011544579 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011544583 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011544584 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011544585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017013623 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017013624 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017013625 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017013627 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017013628 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017013629 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017013638 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024447190 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024447191 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024447192 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024447193 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024447194 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024447195 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001745560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB071403 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB081516 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC090541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC090786 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC116376 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK002124 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK002126 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK023822 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK055154 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK314625 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL157483 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY358441 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC060772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ016671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX104931 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX649103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF593533 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR998055 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA244956 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA404904 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA981630 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HY140335 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF458693 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF458695 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF458697 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000332246   ⟹   ENSP00000330805
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl819,404,161 - 19,682,583 (-)Ensembl
RefSeq Acc Id: ENST00000397998   ⟹   ENSP00000381084
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl819,404,161 - 19,682,761 (-)Ensembl
RefSeq Acc Id: ENST00000454498   ⟹   ENSP00000411816
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl819,404,161 - 19,602,495 (-)Ensembl
RefSeq Acc Id: ENST00000517494   ⟹   ENSP00000429130
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl819,505,545 - 19,758,029 (-)Ensembl
RefSeq Acc Id: ENST00000517651
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl819,505,880 - 19,642,022 (-)Ensembl
RefSeq Acc Id: ENST00000518542
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl819,420,383 - 19,495,191 (-)Ensembl
RefSeq Acc Id: ENST00000519222   ⟹   ENSP00000428216
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl819,439,877 - 19,602,759 (-)Ensembl
RefSeq Acc Id: ENST00000520003   ⟹   ENSP00000428774
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl819,505,674 - 19,602,495 (-)Ensembl
RefSeq Acc Id: ENST00000522573
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl819,506,116 - 19,757,217 (-)Ensembl
RefSeq Acc Id: ENST00000522732
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl819,506,037 - 19,532,020 (-)Ensembl
RefSeq Acc Id: ENST00000522854   ⟹   ENSP00000429809
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl819,405,780 - 19,601,865 (-)Ensembl
RefSeq Acc Id: ENST00000523227
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl819,505,906 - 19,683,240 (-)Ensembl
RefSeq Acc Id: ENST00000523262   ⟹   ENSP00000428089
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl819,505,523 - 19,757,938 (-)Ensembl
RefSeq Acc Id: ENST00000523919
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl819,585,286 - 19,602,224 (-)Ensembl
RefSeq Acc Id: ENST00000524112
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl819,587,874 - 19,602,224 (-)Ensembl
RefSeq Acc Id: ENST00000524213   ⟹   ENSP00000427740
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl819,505,792 - 19,757,305 (-)Ensembl
RefSeq Acc Id: NM_001130518   ⟹   NP_001123990
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,602,229 (-)NCBI
GRCh37819,261,672 - 19,540,261 (-)RGD
Celera818,225,010 - 18,503,692 (-)RGD
HuRef817,801,989 - 18,080,455 (-)ENTREZGENE
CHM1_1819,463,117 - 19,661,567 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001354475   ⟹   NP_001341404
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,757,908 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001354476   ⟹   NP_001341405
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,757,908 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001354477   ⟹   NP_001341406
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,757,908 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001354480   ⟹   NP_001341409
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,757,908 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001354481   ⟹   NP_001341410
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,757,908 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001354483   ⟹   NP_001341412
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,757,277 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001354484   ⟹   NP_001341413
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,757,277 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001354485   ⟹   NP_001341414
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,757,277 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001354487   ⟹   NP_001341416
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,757,277 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001354488   ⟹   NP_001341417
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,757,277 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001354489   ⟹   NP_001341418
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,757,277 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001354490   ⟹   NP_001341419
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,757,572 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001354491   ⟹   NP_001341420
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,602,229 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001354492   ⟹   NP_001341421
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,602,229 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001354494   ⟹   NP_001341423
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,602,229 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001354495   ⟹   NP_001341424
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,602,229 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001354496   ⟹   NP_001341425
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,602,229 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001354497   ⟹   NP_001341426
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,602,229 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001354498   ⟹   NP_001341427
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,602,229 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001354499   ⟹   NP_001341428
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,602,229 (-)NCBI
Sequence:
RefSeq Acc Id: NM_018371   ⟹   NP_060841
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,682,603 (-)NCBI
GRCh37819,261,672 - 19,540,261 (-)RGD
Build 36819,305,952 - 19,584,374 (-)NCBI Archive
Celera818,225,010 - 18,503,692 (-)RGD
HuRef817,801,989 - 18,080,455 (-)ENTREZGENE
CHM1_1819,463,117 - 19,741,637 (-)NCBI
Sequence:
RefSeq Acc Id: NR_024040
RefSeq Status: REVIEWED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,682,761 (-)NCBI
GRCh37819,261,672 - 19,540,261 (-)RGD
Celera818,225,010 - 18,503,692 (-)RGD
HuRef817,801,989 - 18,080,455 (-)ENTREZGENE
CHM1_1819,463,117 - 19,741,804 (-)NCBI
Sequence:
RefSeq Acc Id: NR_148897
RefSeq Status: REVIEWED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,757,908 (-)NCBI
Sequence:
RefSeq Acc Id: NR_148898
RefSeq Status: REVIEWED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,757,908 (-)NCBI
Sequence:
RefSeq Acc Id: NR_148899
RefSeq Status: REVIEWED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,757,277 (-)NCBI
Sequence:
RefSeq Acc Id: NR_148900
RefSeq Status: REVIEWED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,757,277 (-)NCBI
Sequence:
RefSeq Acc Id: NR_148901
RefSeq Status: REVIEWED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,602,229 (-)NCBI
Sequence:
RefSeq Acc Id: NR_148902
RefSeq Status: REVIEWED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,602,229 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006716360   ⟹   XP_006716423
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,602,545 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006716363   ⟹   XP_006716426
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,683,240 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006716364   ⟹   XP_006716427
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,506,386 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011544578   ⟹   XP_011542880
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,602,545 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011544579   ⟹   XP_011542881
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,602,545 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011544583   ⟹   XP_011542885
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,532,020 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011544584   ⟹   XP_011542886
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,757,271 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011544585   ⟹   XP_011542887
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,164 - 19,495,137 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017013623   ⟹   XP_016869112
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,602,545 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017013624   ⟹   XP_016869113
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,602,545 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017013625   ⟹   XP_016869114
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,515,196 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017013627   ⟹   XP_016869116
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,734,795 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017013628   ⟹   XP_016869117
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,734,794 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017013629   ⟹   XP_016869118
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,684,157 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017013638   ⟹   XP_016869127
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,684,157 (-)NCBI
Sequence:
RefSeq Acc Id: XM_024447190   ⟹   XP_024302958
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,606,952 (-)NCBI
Sequence:
RefSeq Acc Id: XM_024447191   ⟹   XP_024302959
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,682,592 (-)NCBI
Sequence:
RefSeq Acc Id: XM_024447192   ⟹   XP_024302960
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,682,877 (-)NCBI
Sequence:
RefSeq Acc Id: XM_024447193   ⟹   XP_024302961
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,757,490 (-)NCBI
Sequence:
RefSeq Acc Id: XM_024447194   ⟹   XP_024302962
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,642,315 (-)NCBI
Sequence:
RefSeq Acc Id: XM_024447195   ⟹   XP_024302963
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,757,276 (-)NCBI
Sequence:
RefSeq Acc Id: XR_001745560
RefSeq Status:
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,404,161 - 19,602,495 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001123990 (Get FASTA)   NCBI Sequence Viewer  
  NP_001341404 (Get FASTA)   NCBI Sequence Viewer  
  NP_001341405 (Get FASTA)   NCBI Sequence Viewer  
  NP_001341406 (Get FASTA)   NCBI Sequence Viewer  
  NP_001341409 (Get FASTA)   NCBI Sequence Viewer  
  NP_001341410 (Get FASTA)   NCBI Sequence Viewer  
  NP_001341412 (Get FASTA)   NCBI Sequence Viewer  
  NP_001341413 (Get FASTA)   NCBI Sequence Viewer  
  NP_001341414 (Get FASTA)   NCBI Sequence Viewer  
  NP_001341416 (Get FASTA)   NCBI Sequence Viewer  
  NP_001341417 (Get FASTA)   NCBI Sequence Viewer  
  NP_001341418 (Get FASTA)   NCBI Sequence Viewer  
  NP_001341419 (Get FASTA)   NCBI Sequence Viewer  
  NP_001341420 (Get FASTA)   NCBI Sequence Viewer  
  NP_001341421 (Get FASTA)   NCBI Sequence Viewer  
  NP_001341423 (Get FASTA)   NCBI Sequence Viewer  
  NP_001341424 (Get FASTA)   NCBI Sequence Viewer  
  NP_001341425 (Get FASTA)   NCBI Sequence Viewer  
  NP_001341426 (Get FASTA)   NCBI Sequence Viewer  
  NP_001341427 (Get FASTA)   NCBI Sequence Viewer  
  NP_001341428 (Get FASTA)   NCBI Sequence Viewer  
  NP_060841 (Get FASTA)   NCBI Sequence Viewer  
  XP_006716423 (Get FASTA)   NCBI Sequence Viewer  
  XP_006716426 (Get FASTA)   NCBI Sequence Viewer  
  XP_006716427 (Get FASTA)   NCBI Sequence Viewer  
  XP_011542880 (Get FASTA)   NCBI Sequence Viewer  
  XP_011542881 (Get FASTA)   NCBI Sequence Viewer  
  XP_011542885 (Get FASTA)   NCBI Sequence Viewer  
  XP_011542886 (Get FASTA)   NCBI Sequence Viewer  
  XP_011542887 (Get FASTA)   NCBI Sequence Viewer  
  XP_016869112 (Get FASTA)   NCBI Sequence Viewer  
  XP_016869113 (Get FASTA)   NCBI Sequence Viewer  
  XP_016869114 (Get FASTA)   NCBI Sequence Viewer  
  XP_016869116 (Get FASTA)   NCBI Sequence Viewer  
  XP_016869117 (Get FASTA)   NCBI Sequence Viewer  
  XP_016869118 (Get FASTA)   NCBI Sequence Viewer  
  XP_016869127 (Get FASTA)   NCBI Sequence Viewer  
  XP_024302958 (Get FASTA)   NCBI Sequence Viewer  
  XP_024302959 (Get FASTA)   NCBI Sequence Viewer  
  XP_024302960 (Get FASTA)   NCBI Sequence Viewer  
  XP_024302961 (Get FASTA)   NCBI Sequence Viewer  
  XP_024302962 (Get FASTA)   NCBI Sequence Viewer  
  XP_024302963 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH60772 (Get FASTA)   NCBI Sequence Viewer  
  AAQ88806 (Get FASTA)   NCBI Sequence Viewer  
  BAA92093 (Get FASTA)   NCBI Sequence Viewer  
  BAB85992 (Get FASTA)   NCBI Sequence Viewer  
  BAC16217 (Get FASTA)   NCBI Sequence Viewer  
  BAG37191 (Get FASTA)   NCBI Sequence Viewer  
  BAG51476 (Get FASTA)   NCBI Sequence Viewer  
  CAB75673 (Get FASTA)   NCBI Sequence Viewer  
  EAW63770 (Get FASTA)   NCBI Sequence Viewer  
  EAW63771 (Get FASTA)   NCBI Sequence Viewer  
  EAW63772 (Get FASTA)   NCBI Sequence Viewer  
  Q8TDX6 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_060841   ⟸   NM_018371
- UniProtKB: Q8TDX6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001123990   ⟸   NM_001130518
- UniProtKB: Q8TDX6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006716426   ⟸   XM_006716363
- Peptide Label: isoform X1
- UniProtKB: Q8TDX6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006716423   ⟸   XM_006716360
- Peptide Label: isoform X1
- UniProtKB: Q8TDX6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006716427   ⟸   XM_006716364
- Peptide Label: isoform X1
- UniProtKB: Q8TDX6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011542886   ⟸   XM_011544584
- Peptide Label: isoform X1
- UniProtKB: Q8TDX6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011542881   ⟸   XM_011544579
- Peptide Label: isoform X1
- UniProtKB: Q8TDX6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011542880   ⟸   XM_011544578
- Peptide Label: isoform X1
- UniProtKB: Q8TDX6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011542885   ⟸   XM_011544583
- Peptide Label: isoform X1
- UniProtKB: Q8TDX6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011542887   ⟸   XM_011544585
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_016869117   ⟸   XM_017013628
- Peptide Label: isoform X1
- UniProtKB: Q8TDX6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_016869116   ⟸   XM_017013627
- Peptide Label: isoform X1
- UniProtKB: Q8TDX6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_016869118   ⟸   XM_017013629
- Peptide Label: isoform X1
- UniProtKB: Q8TDX6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_016869127   ⟸   XM_017013638
- Peptide Label: isoform X1
- UniProtKB: Q8TDX6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_016869113   ⟸   XM_017013624
- Peptide Label: isoform X1
- UniProtKB: Q8TDX6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_016869112   ⟸   XM_017013623
- Peptide Label: isoform X1
- UniProtKB: Q8TDX6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_016869114   ⟸   XM_017013625
- Peptide Label: isoform X1
- UniProtKB: Q8TDX6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001341405   ⟸   NM_001354476
- Sequence:
RefSeq Acc Id: NP_001341410   ⟸   NM_001354481
- Sequence:
RefSeq Acc Id: NP_001341406   ⟸   NM_001354477
- Sequence:
RefSeq Acc Id: NP_001341409   ⟸   NM_001354480
- Sequence:
RefSeq Acc Id: NP_001341404   ⟸   NM_001354475
- Sequence:
RefSeq Acc Id: XP_024302961   ⟸   XM_024447193
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: NP_001341412   ⟸   NM_001354483
- Sequence:
RefSeq Acc Id: NP_001341416   ⟸   NM_001354487
- Sequence:
RefSeq Acc Id: NP_001341418   ⟸   NM_001354489
- Sequence:
RefSeq Acc Id: NP_001341414   ⟸   NM_001354485
- Sequence:
RefSeq Acc Id: NP_001341413   ⟸   NM_001354484
- Sequence:
RefSeq Acc Id: NP_001341417   ⟸   NM_001354488
- Sequence:
RefSeq Acc Id: XP_024302963   ⟸   XM_024447195
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: NP_001341419   ⟸   NM_001354490
- Sequence:
RefSeq Acc Id: XP_024302960   ⟸   XM_024447192
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_024302959   ⟸   XM_024447191
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_024302962   ⟸   XM_024447194
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_024302958   ⟸   XM_024447190
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: NP_001341426   ⟸   NM_001354497
- Sequence:
RefSeq Acc Id: NP_001341421   ⟸   NM_001354492
- Sequence:
RefSeq Acc Id: NP_001341424   ⟸   NM_001354495
- Sequence:
RefSeq Acc Id: NP_001341423   ⟸   NM_001354494
- Sequence:
RefSeq Acc Id: NP_001341425   ⟸   NM_001354496
- Sequence:
RefSeq Acc Id: NP_001341428   ⟸   NM_001354499
- Sequence:
RefSeq Acc Id: NP_001341420   ⟸   NM_001354491
- Sequence:
RefSeq Acc Id: NP_001341427   ⟸   NM_001354498
- Sequence:
RefSeq Acc Id: ENSP00000429130   ⟸   ENST00000517494
RefSeq Acc Id: ENSP00000330805   ⟸   ENST00000332246
RefSeq Acc Id: ENSP00000428216   ⟸   ENST00000519222
RefSeq Acc Id: ENSP00000411816   ⟸   ENST00000454498
RefSeq Acc Id: ENSP00000428774   ⟸   ENST00000520003
RefSeq Acc Id: ENSP00000429809   ⟸   ENST00000522854
RefSeq Acc Id: ENSP00000428089   ⟸   ENST00000523262
RefSeq Acc Id: ENSP00000427740   ⟸   ENST00000524213
RefSeq Acc Id: ENSP00000381084   ⟸   ENST00000397998

Promoters
RGD ID:6806653
Promoter ID:HG_KWN:60835
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell
Transcripts:ENST00000311540
Position:
Human AssemblyChrPosition (strand)Source
Build 36819,360,056 - 19,360,556 (-)MPROMDB
RGD ID:7212739
Promoter ID:EPDNEW_H12115
Type:initiation region
Name:CSGALNACT1_2
Description:chondroitin sulfate N-acetylgalactosaminyltransferase 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H12116  EPDNEW_H12117  EPDNEW_H12118  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,602,229 - 19,602,289EPDNEW
RGD ID:7212741
Promoter ID:EPDNEW_H12116
Type:initiation region
Name:CSGALNACT1_1
Description:chondroitin sulfate N-acetylgalactosaminyltransferase 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H12115  EPDNEW_H12117  EPDNEW_H12118  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,602,495 - 19,602,555EPDNEW
RGD ID:7212743
Promoter ID:EPDNEW_H12117
Type:initiation region
Name:CSGALNACT1_3
Description:chondroitin sulfate N-acetylgalactosaminyltransferase 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H12115  EPDNEW_H12116  EPDNEW_H12118  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,682,603 - 19,682,663EPDNEW
RGD ID:7212745
Promoter ID:EPDNEW_H12118
Type:initiation region
Name:CSGALNACT1_4
Description:chondroitin sulfate N-acetylgalactosaminyltransferase 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H12115  EPDNEW_H12116  EPDNEW_H12117  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,758,029 - 19,758,089EPDNEW

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 8p23.1-11.21(chr8:12609975-42085703)x3 copy number gain See cases [RCV000050294] Chr8:12609975..42085703 [GRCh38]
Chr8:12467484..41943221 [GRCh37]
Chr8:12511855..42062378 [NCBI36]
Chr8:8p23.1-11.21
pathogenic
GRCh38/hg38 8p23.3-21.1(chr8:2475295-27504279)x1 copy number loss See cases [RCV000050297] Chr8:2475295..27504279 [GRCh38]
Chr8:2292235..27361796 [GRCh37]
Chr8:2121457..27417713 [NCBI36]
Chr8:8p23.3-21.1
pathogenic
GRCh38/hg38 8p23.1-11.1(chr8:12728904-43673207)x3 copy number gain See cases [RCV000050912] Chr8:12728904..43673207 [GRCh38]
Chr8:12586413..43528350 [GRCh37]
Chr8:12630784..43647507 [NCBI36]
Chr8:8p23.1-11.1
pathogenic
GRCh38/hg38 8p23.1-12(chr8:12383584-36370018)x3 copy number gain See cases [RCV000051145] Chr8:12383584..36370018 [GRCh38]
Chr8:12241093..36227536 [GRCh37]
Chr8:12285464..36347088 [NCBI36]
Chr8:8p23.1-12
pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:241530-145049449)x3 copy number gain See cases [RCV000051206] Chr8:241530..145049449 [GRCh38]
Chr8:191530..146274835 [GRCh37]
Chr8:181530..146245639 [NCBI36]
Chr8:8p23.3-q24.3
pathogenic
GRCh38/hg38 8p23.1-11.21(chr8:12728904-41928741)x3 copy number gain See cases [RCV000051110] Chr8:12728904..41928741 [GRCh38]
Chr8:12586413..41786259 [GRCh37]
Chr8:12630784..41905416 [NCBI36]
Chr8:8p23.1-11.21
pathogenic
GRCh38/hg38 8p23.1-11.23(chr8:12609975-37892000)x3 copy number gain See cases [RCV000053629] Chr8:12609975..37892000 [GRCh38]
Chr8:12467484..37749518 [GRCh37]
Chr8:12511855..37868676 [NCBI36]
Chr8:8p23.1-11.23
pathogenic
GRCh38/hg38 8p23.1-11.1(chr8:12609975-43336172)x3 copy number gain See cases [RCV000053630] Chr8:12609975..43336172 [GRCh38]
Chr8:12467484..43191315 [GRCh37]
Chr8:12511855..43310472 [NCBI36]
Chr8:8p23.1-11.1
pathogenic
GRCh38/hg38 8p23.1-11.1(chr8:12609975-43255410)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053631]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053631]|See cases [RCV000053631] Chr8:12609975..43255410 [GRCh38]
Chr8:12467484..43110553 [GRCh37]
Chr8:12511855..43229710 [NCBI36]
Chr8:8p23.1-11.1
pathogenic
GRCh38/hg38 8p23.1-11.1(chr8:12750796-43532444)x3 copy number gain See cases [RCV000053632] Chr8:12750796..43532444 [GRCh38]
Chr8:12608305..43387587 [GRCh37]
Chr8:12652676..43506744 [NCBI36]
Chr8:8p23.1-11.1
pathogenic
GRCh38/hg38 8p23.1-12(chr8:12750796-29445409)x3 copy number gain See cases [RCV000053633] Chr8:12750796..29445409 [GRCh38]
Chr8:12608305..29302926 [GRCh37]
Chr8:12652676..29358845 [NCBI36]
Chr8:8p23.1-12
pathogenic
GRCh38/hg38 8p23.1-21.3(chr8:12787272-20952389)x3 copy number gain See cases [RCV000053634] Chr8:12787272..20952389 [GRCh38]
Chr8:12644781..20809900 [GRCh37]
Chr8:12689152..20854180 [NCBI36]
Chr8:8p23.1-21.3
pathogenic
GRCh38/hg38 8p22-q11.21(chr8:14940110-47929925)x3 copy number gain See cases [RCV000053635] Chr8:14940110..47929925 [GRCh38]
Chr8:14797619..48842485 [GRCh37]
Chr8:14841990..49005038 [NCBI36]
Chr8:8p22-q11.21
pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:241530-145054634)x3 copy number gain See cases [RCV000053602] Chr8:241530..145054634 [GRCh38]
Chr8:191530..146280020 [GRCh37]
Chr8:181530..146250824 [NCBI36]
Chr8:8p23.3-q24.3
pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:244417-145054775)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053604]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053604]|See cases [RCV000053604] Chr8:244417..145054775 [GRCh38]
Chr8:194417..146280161 [GRCh37]
Chr8:184417..146250965 [NCBI36]
Chr8:8p23.3-q24.3
pathogenic
GRCh38/hg38 8p23.3-12(chr8:96310-30614703)x3 copy number gain See cases [RCV000053599] Chr8:96310..30614703 [GRCh38]
Chr8:46310..30472220 [GRCh37]
Chr8:36310..30591762 [NCBI36]
Chr8:8p23.3-12
pathogenic
NM_001130518.1(CSGALNACT1):c.-297+36834G>A single nucleotide variant Lung cancer [RCV000107260] Chr8:19554326 [GRCh38]
Chr8:19411837 [GRCh37]
Chr8:8p21.3
uncertain significance
GRCh37/hg19 8p23.3-11.1(chr8:176814-43396776) copy number gain Abnormality of the fetal cardiovascular system [RCV001291977] Chr8:176814..43396776 [GRCh37]
Chr8:8p23.3-11.1
pathogenic
GRCh38/hg38 8p23.1-21.3(chr8:12732530-20436882)x3 copy number gain See cases [RCV000135294] Chr8:12732530..20436882 [GRCh38]
Chr8:12590039..20294393 [GRCh37]
Chr8:12634410..20338673 [NCBI36]
Chr8:8p23.1-21.3
pathogenic
GRCh38/hg38 8p22-21.3(chr8:18988335-19599269)x3 copy number gain See cases [RCV000135831] Chr8:18988335..19599269 [GRCh38]
Chr8:18845845..19456780 [GRCh37]
Chr8:18890125..19501060 [NCBI36]
Chr8:8p22-21.3
benign
GRCh38/hg38 8p23.1-11.1(chr8:12609975-43673207)x3 copy number gain See cases [RCV000135786] Chr8:12609975..43673207 [GRCh38]
Chr8:12467484..43528350 [GRCh37]
Chr8:12511855..43647507 [NCBI36]
Chr8:8p23.1-11.1
pathogenic
GRCh38/hg38 8p23.1-11.1(chr8:12383584-43673207)x3 copy number gain See cases [RCV000135566] Chr8:12383584..43673207 [GRCh38]
Chr8:12241093..43528350 [GRCh37]
Chr8:12285464..43647507 [NCBI36]
Chr8:8p23.1-11.1
pathogenic
GRCh38/hg38 8p23.1-11.21(chr8:12728904-40169194)x3 copy number gain See cases [RCV000136516] Chr8:12728904..40169194 [GRCh38]
Chr8:12586413..40026713 [GRCh37]
Chr8:12630784..40145870 [NCBI36]
Chr8:8p23.1-11.21
pathogenic
GRCh38/hg38 8p23.3-21.3(chr8:241530-23198398)x3 copy number gain See cases [RCV000135967] Chr8:241530..23198398 [GRCh38]
Chr8:191530..23055911 [GRCh37]
Chr8:181530..23111856 [NCBI36]
Chr8:8p23.3-21.3
pathogenic
GRCh38/hg38 8p23.3-21.2(chr8:241605-24656971)x3 copy number gain See cases [RCV000136026] Chr8:241605..24656971 [GRCh38]
Chr8:191605..24514484 [GRCh37]
Chr8:181605..24570374 [NCBI36]
Chr8:8p23.3-21.2
pathogenic
GRCh38/hg38 8p23.1-12(chr8:12725750-30180521)x3 copy number gain See cases [RCV000136825] Chr8:12725750..30180521 [GRCh38]
Chr8:12583259..30038037 [GRCh37]
Chr8:12627630..30157579 [NCBI36]
Chr8:8p23.1-12
pathogenic
GRCh38/hg38 8p23.1-11.1(chr8:12182421-43673207)x3 copy number gain See cases [RCV000137249] Chr8:12182421..43673207 [GRCh38]
Chr8:12039930..43528350 [GRCh37]
Chr8:12077339..43647507 [NCBI36]
Chr8:8p23.1-11.1
pathogenic
GRCh38/hg38 8p23.1-12(chr8:12698495-35476082)x3 copy number gain See cases [RCV000138058] Chr8:12698495..35476082 [GRCh38]
Chr8:12556004..35333600 [GRCh37]
Chr8:12600375..35453142 [NCBI36]
Chr8:8p23.1-12
pathogenic
GRCh38/hg38 8p23.3-11.23(chr8:226452-38021728)x3 copy number gain See cases [RCV000137807] Chr8:226452..38021728 [GRCh38]
Chr8:176452..37879246 [GRCh37]
Chr8:166452..37998403 [NCBI36]
Chr8:8p23.3-11.23
pathogenic|likely pathogenic
GRCh38/hg38 8p23.3-12(chr8:241605-31091074)x3 copy number gain See cases [RCV000138831] Chr8:241605..31091074 [GRCh38]
Chr8:191605..30948590 [GRCh37]
Chr8:181605..31068132 [NCBI36]
Chr8:8p23.3-12
pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:241605-145054781)x3 copy number gain See cases [RCV000138643] Chr8:241605..145054781 [GRCh38]
Chr8:191605..146280167 [GRCh37]
Chr8:181605..146250971 [NCBI36]
Chr8:8p23.3-q24.3
pathogenic
GRCh38/hg38 8p23.1-21.1(chr8:12382844-28625564)x3 copy number gain See cases [RCV000138244] Chr8:12382844..28625564 [GRCh38]
Chr8:12240353..28483081 [GRCh37]
Chr8:12284724..28539000 [NCBI36]
Chr8:8p23.1-21.1
pathogenic
GRCh38/hg38 8p23.1-11.22(chr8:7141697-38695546)x3 copy number gain See cases [RCV000139891] Chr8:7141697..38695546 [GRCh38]
Chr8:6999219..38553064 [GRCh37]
Chr8:6986629..38672221 [NCBI36]
Chr8:8p23.1-11.22
pathogenic
GRCh38/hg38 8p23.1-11.22(chr8:12729023-39235934)x3 copy number gain See cases [RCV000139770] Chr8:12729023..39235934 [GRCh38]
Chr8:12586532..39093453 [GRCh37]
Chr8:12630903..39212610 [NCBI36]
Chr8:8p23.1-11.22
pathogenic
GRCh38/hg38 8p23.1-11.1(chr8:12646123-43686843)x3 copy number gain See cases [RCV000139796] Chr8:12646123..43686843 [GRCh38]
Chr8:12503632..43541986 [GRCh37]
Chr8:12548003..43661143 [NCBI36]
Chr8:8p23.1-11.1
pathogenic
GRCh38/hg38 8p23.1-11.23(chr8:11851113-37216333)x3 copy number gain See cases [RCV000139549] Chr8:11851113..37216333 [GRCh38]
Chr8:11708622..37073851 [GRCh37]
Chr8:11746031..37193009 [NCBI36]
Chr8:8p23.1-11.23
pathogenic
GRCh38/hg38 8p23.3-12(chr8:226452-34491890)x3 copy number gain See cases [RCV000141410] Chr8:226452..34491890 [GRCh38]
Chr8:176452..34349408 [GRCh37]
Chr8:166452..34468950 [NCBI36]
Chr8:8p23.3-12
pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:208048-145070385)x3 copy number gain See cases [RCV000141808] Chr8:208048..145070385 [GRCh38]
Chr8:158048..146295771 [GRCh37]
Chr8:148048..146266575 [NCBI36]
Chr8:8p23.3-q24.3
pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:226452-145068712)x3 copy number gain See cases [RCV000142858] Chr8:226452..145068712 [GRCh38]
Chr8:176452..146294098 [GRCh37]
Chr8:166452..146264902 [NCBI36]
Chr8:8p23.3-q24.3
pathogenic
GRCh38/hg38 8p23.1-12(chr8:12383584-29033946)x1 copy number loss See cases [RCV000142516] Chr8:12383584..29033946 [GRCh38]
Chr8:12241093..28891463 [GRCh37]
Chr8:12285464..28947382 [NCBI36]
Chr8:8p23.1-12
pathogenic
GRCh38/hg38 8p22-12(chr8:18972996-33619264)x1 copy number loss See cases [RCV000142747] Chr8:18972996..33619264 [GRCh38]
Chr8:18830506..33476782 [GRCh37]
Chr8:18874786..33596324 [NCBI36]
Chr8:8p22-12
pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:241530-145054634)x3 copy number gain See cases [RCV000148092] Chr8:241530..145054634 [GRCh38]
Chr8:191530..146280020 [GRCh37]
Chr8:181530..146250824 [NCBI36]
Chr8:8p23.3-q24.3
pathogenic
GRCh38/hg38 8p23.1-11.21(chr8:12633490-40685533)x3 copy number gain See cases [RCV000143508] Chr8:12633490..40685533 [GRCh38]
Chr8:12490999..40543052 [GRCh37]
Chr8:12535370..40662209 [NCBI36]
Chr8:8p23.1-11.21
pathogenic
GRCh38/hg38 8p23.1-11.1(chr8:12728904-43673207)x3 copy number gain See cases [RCV000148237] Chr8:12728904..43673207 [GRCh38]
Chr8:12586413..43528350 [GRCh37]
Chr8:12630784..43647507 [NCBI36]
Chr8:8p23.1-11.1
pathogenic
GRCh38/hg38 8p23.1-11.21(chr8:12609975-42085703)x3 copy number gain See cases [RCV000148249] Chr8:12609975..42085703 [GRCh38]
Chr8:12467484..41943221 [GRCh37]
Chr8:12511855..42062378 [NCBI36]
Chr8:8p23.1-11.21
pathogenic
GRCh38/hg38 8p23.2-21.1(chr8:2475295-27504279)x1 copy number loss See cases [RCV000148252] Chr8:2475295..27504279 [GRCh38]
Chr8:2292235..27361796 [GRCh37]
Chr8:2121457..27417713 [NCBI36]
Chr8:8p23.2-21.1
pathogenic
GRCh37/hg19 8p23.1-11.22(chr8:12528482-39593802)x3 copy number gain See cases [RCV000511325] Chr8:12528482..39593802 [GRCh37]
Chr8:8p23.1-11.22
pathogenic
GRCh37/hg19 8p23.1-21.2(chr8:12580132-26774307)x3 copy number gain See cases [RCV000239945] Chr8:12580132..26774307 [GRCh37]
Chr8:8p23.1-21.2
pathogenic
GRCh37/hg19 8p23.3-12(chr8:158048-30262760)x3 copy number gain See cases [RCV000449225] Chr8:158048..30262760 [GRCh37]
Chr8:8p23.3-12
pathogenic
GRCh37/hg19 8p22-21.3(chr8:15935542-19321304)x3 copy number gain See cases [RCV000446821] Chr8:15935542..19321304 [GRCh37]
Chr8:8p22-21.3
uncertain significance
GRCh37/hg19 8p22-21.3(chr8:18770061-19709425)x3 copy number gain See cases [RCV000447250] Chr8:18770061..19709425 [GRCh37]
Chr8:8p22-21.3
likely benign
GRCh37/hg19 8p23.3-q24.3(chr8:158991-146280828)x3 copy number gain See cases [RCV000447507] Chr8:158991..146280828 [GRCh37]
Chr8:8p23.3-q24.3
pathogenic
GRCh37/hg19 8p22-21.2(chr8:13091530-24483615) copy number loss See cases [RCV000447428] Chr8:13091530..24483615 [GRCh37]
Chr8:8p22-21.2
pathogenic
GRCh37/hg19 8p23.3-11.1(chr8:158048-43786723)x3 copy number gain See cases [RCV000447909] Chr8:158048..43786723 [GRCh37]
Chr8:8p23.3-11.1
pathogenic
GRCh37/hg19 8p23.1-11.1(chr8:12580132-43388233)x3 copy number gain See cases [RCV000447913] Chr8:12580132..43388233 [GRCh37]
Chr8:8p23.1-11.1
pathogenic
GRCh37/hg19 8p22-12(chr8:16992973-32612724)x1 copy number loss not provided [RCV000509389] Chr8:16992973..32612724 [GRCh37]
Chr8:8p22-12
not provided
GRCh37/hg19 8p23.3-q24.3(chr8:158049-146295771) copy number gain See cases [RCV000510234] Chr8:158049..146295771 [GRCh37]
Chr8:8p23.3-q24.3
pathogenic
GRCh37/hg19 8p23.1-12(chr8:12528482-33684786)x3 copy number gain See cases [RCV000510571] Chr8:12528482..33684786 [GRCh37]
Chr8:8p23.1-12
pathogenic
GRCh37/hg19 8p22-21.3(chr8:18845744-19594010)x3 copy number gain See cases [RCV000511789] Chr8:18845744..19594010 [GRCh37]
Chr8:8p22-21.3
uncertain significance
GRCh37/hg19 8p21.3(chr8:19108471-19816839)x3 copy number gain See cases [RCV000511994] Chr8:19108471..19816839 [GRCh37]
Chr8:8p21.3
likely benign
GRCh37/hg19 8p23.1-11.1(chr8:11935023-43824035)x3 copy number gain See cases [RCV000511028] Chr8:11935023..43824035 [GRCh37]
Chr8:8p23.1-11.1
pathogenic
GRCh37/hg19 8p23.1-12(chr8:11945855-34875355)x3 copy number gain See cases [RCV000510899] Chr8:11945855..34875355 [GRCh37]
Chr8:8p23.1-12
pathogenic
GRCh37/hg19 8p23.3-q24.3(chr8:158049-146295771)x3 copy number gain See cases [RCV000511095] Chr8:158049..146295771 [GRCh37]
Chr8:8p23.3-q24.3
pathogenic
GRCh37/hg19 8p23.1-21.2(chr8:12580104-25947329) copy number gain Autistic disorder of childhood onset [RCV000626542] Chr8:12580104..25947329 [GRCh37]
Chr8:8p23.1-21.2
pathogenic
GRCh37/hg19 8p23.1-q24.3(chr8:12490999-146295771)x3 copy number gain See cases [RCV000512169] Chr8:12490999..146295771 [GRCh37]
Chr8:8p23.1-q24.3
pathogenic
GRCh37/hg19 8p22-21.3(chr8:18831686-19340019)x3 copy number gain See cases [RCV000512389] Chr8:18831686..19340019 [GRCh37]
Chr8:8p22-21.3
uncertain significance
GRCh37/hg19 8p22-21.3(chr8:18977653-19438015)x3 copy number gain not provided [RCV000659242] Chr8:18977653..19438015 [GRCh37]
Chr8:8p22-21.3
likely benign
GRCh37/hg19 8p23.1-21.2(chr8:8770948-27079636)x3 copy number gain not provided [RCV000683041] Chr8:8770948..27079636 [GRCh37]
Chr8:8p23.1-21.2
pathogenic
GRCh37/hg19 8p23.3-21.2(chr8:1825200-24533193)x3 copy number gain not provided [RCV000683042] Chr8:1825200..24533193 [GRCh37]
Chr8:8p23.3-21.2
pathogenic
GRCh37/hg19 8p21.3(chr8:19145799-19472435)x3 copy number gain not provided [RCV000682971] Chr8:19145799..19472435 [GRCh37]
Chr8:8p21.3
uncertain significance
GRCh37/hg19 8p23.1-12(chr8:12552775-35935825)x3 copy number gain not provided [RCV000683043] Chr8:12552775..35935825 [GRCh37]
Chr8:8p23.1-12
pathogenic
GRCh37/hg19 8p23.3-q24.3(chr8:164984-146293414)x3 copy number gain not provided [RCV000747254] Chr8:164984..146293414 [GRCh37]
Chr8:8p23.3-q24.3
pathogenic
GRCh37/hg19 8p23.3-q24.3(chr8:10213-146293414)x3 copy number gain not provided [RCV000747248] Chr8:10213..146293414 [GRCh37]
Chr8:8p23.3-q24.3
pathogenic
GRCh37/hg19 8p21.3(chr8:19326083-19389865)x1 copy number loss not provided [RCV000747464] Chr8:19326083..19389865 [GRCh37]
Chr8:8p21.3
benign
GRCh37/hg19 8p21.3(chr8:19342285-19446147)x1 copy number loss not provided [RCV000747465] Chr8:19342285..19446147 [GRCh37]
Chr8:8p21.3
benign
GRCh37/hg19 8p21.3(chr8:19371057-19434698)x1 copy number loss not provided [RCV000747466] Chr8:19371057..19434698 [GRCh37]
Chr8:8p21.3
benign
GRCh37/hg19 8p21.3(chr8:19371767-19434698)x1 copy number loss not provided [RCV000747467] Chr8:19371767..19434698 [GRCh37]
Chr8:8p21.3
benign
GRCh37/hg19 8p23.1-12(chr8:12556004-34374150)x3 copy number gain not provided [RCV000762735] Chr8:12556004..34374150 [GRCh37]
Chr8:8p23.1-12
likely pathogenic
NM_001130518.1(CSGALNACT1):c.1575_1576del (p.Lys526fs) deletion not provided [RCV000883855] Chr8:19405803..19405804 [GRCh38]
Chr8:19263314..19263315 [GRCh37]
Chr8:8p21.3
likely benign
NM_001130518.1(CSGALNACT1):c.317T>C (p.Leu106Pro) single nucleotide variant not provided [RCV000950165] Chr8:19505518 [GRCh38]
Chr8:19363029 [GRCh37]
Chr8:8p21.3
benign
NM_018371.4(CSGALNACT1):c.1151C>G (p.Pro384Arg) single nucleotide variant Skeletal dysplasia, mild, with joint laxity and advanced bone age [RCV001090035] Chr8:19418732 [GRCh38]
Chr8:19276243 [GRCh37]
Chr8:8p21.3
pathogenic|likely pathogenic
NM_018371.4(CSGALNACT1):c.1294G>T (p.Asp432Tyr) single nucleotide variant Skeletal dysplasia, mild, with joint laxity and advanced bone age [RCV001090038] Chr8:19408628 [GRCh38]
Chr8:19266139 [GRCh37]
Chr8:8p21.3
pathogenic|likely pathogenic
GRCh37/hg19 8p22-21.3(chr8:18367759-19510286)x3 copy number gain See cases [RCV000790591] Chr8:18367759..19510286 [GRCh37]
Chr8:8p22-21.3
uncertain significance
Single allele duplication not provided [RCV000768452] Chr8:12546855..35816855 [GRCh37]
Chr8:8p23.1-12
likely pathogenic
GRCh37/hg19 8p21.3(chr8:19147165-19472940)x3 copy number gain not provided [RCV000848136] Chr8:19147165..19472940 [GRCh37]
Chr8:8p21.3
uncertain significance
GRCh37/hg19 8p21.3(chr8:19306261-19530403)x3 copy number gain not provided [RCV000846475] Chr8:19306261..19530403 [GRCh37]
Chr8:8p21.3
uncertain significance
GRCh37/hg19 8p21.3(chr8:19514867-19643313)x1 copy number loss not provided [RCV000848162] Chr8:19514867..19643313 [GRCh37]
Chr8:8p21.3
uncertain significance
GRCh37/hg19 8p22-21.3(chr8:18266233-20864195)x1 copy number loss not provided [RCV000847806] Chr8:18266233..20864195 [GRCh37]
Chr8:8p22-21.3
uncertain significance
GRCh37/hg19 8p21.3(chr8:19502317-19600998)x1 copy number loss not provided [RCV001006087] Chr8:19502317..19600998 [GRCh37]
Chr8:8p21.3
uncertain significance
GRCh37/hg19 8p21.3(chr8:19514867-19643313)x1 copy number loss not provided [RCV000848125] Chr8:19514867..19643313 [GRCh37]
Chr8:8p21.3
uncertain significance
GRCh37/hg19 8p21.3(chr8:19514867-19643313)x1 copy number loss not provided [RCV000848128] Chr8:19514867..19643313 [GRCh37]
Chr8:8p21.3
uncertain significance
GRCh37/hg19 8p21.3(chr8:19334399-19809695)x3 copy number gain not provided [RCV001006086] Chr8:19334399..19809695 [GRCh37]
Chr8:8p21.3
uncertain significance
GRCh37/hg19 8p21.3(chr8:19170422-19451430)x3 copy number gain not provided [RCV001006085] Chr8:19170422..19451430 [GRCh37]
Chr8:8p21.3
uncertain significance
GRCh37/hg19 8p23.3-q24.3(chr8:158048-146295771)x3 copy number gain not provided [RCV000848478] Chr8:158048..146295771 [GRCh37]
Chr8:8p23.3-q24.3
pathogenic
NM_001130518.1:c.-297+17058_634+22070delinsT indel Skeletal dysplasia, mild, with joint laxity and advanced bone age [RCV001090037]   pathogenic
NM_018371.4:c.635-8538_1228-3196del deletion Skeletal dysplasia, mild, with joint laxity and advanced bone age [RCV001090034] Chr8:8p21.3 pathogenic
NM_018371.4(CSGALNACT1):c.372del (p.His125fs) deletion Skeletal dysplasia, mild, with joint laxity and advanced bone age [RCV001090036] Chr8:19505463 [GRCh38]
Chr8:19362974 [GRCh37]
Chr8:8p21.3
pathogenic
GRCh37/hg19 8p21.3(chr8:19199693-19364763)x1 copy number loss not provided [RCV001259476] Chr8:19199693..19364763 [GRCh37]
Chr8:8p21.3
uncertain significance
GRCh37/hg19 8p21.3(chr8:19109749-19511640)x3 copy number gain not provided [RCV001259478] Chr8:19109749..19511640 [GRCh37]
Chr8:8p21.3
uncertain significance
GRCh37/hg19 8p22-21.3(chr8:18827276-19340019)x3 copy number gain not provided [RCV001259485] Chr8:18827276..19340019 [GRCh37]
Chr8:8p22-21.3
likely benign
GRCh37/hg19 8p23.1-12(chr8:12528482-29886483)x3 copy number gain not provided [RCV001260030] Chr8:12528482..29886483 [GRCh37]
Chr8:8p23.1-12
likely pathogenic
NM_018371.5(CSGALNACT1):c.791A>G (p.Asn264Ser) single nucleotide variant Skeletal dysplasia, mild, with joint laxity and advanced bone age [RCV001281093] Chr8:19458486 [GRCh38]
Chr8:19315997 [GRCh37]
Chr8:8p21.3
likely pathogenic

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:24290 AgrOrtholog
COSMIC CSGALNACT1 COSMIC
Ensembl Genes ENSG00000147408 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSP00000330805 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000381084 UniProtKB/Swiss-Prot
  ENSP00000411816 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000427740 UniProtKB/TrEMBL
  ENSP00000428089 UniProtKB/TrEMBL
  ENSP00000428216 UniProtKB/Swiss-Prot
  ENSP00000428774 UniProtKB/TrEMBL
  ENSP00000429130 UniProtKB/TrEMBL
  ENSP00000429809 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000332246 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000397998 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000454498 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000517494 UniProtKB/TrEMBL
  ENST00000519222 UniProtKB/Swiss-Prot
  ENST00000520003 UniProtKB/TrEMBL
  ENST00000522854 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000523262 UniProtKB/TrEMBL
  ENST00000524213 UniProtKB/TrEMBL
Gene3D-CATH 3.90.550.10 UniProtKB/Swiss-Prot
GTEx ENSG00000147408 GTEx
HGNC ID HGNC:24290 ENTREZGENE
Human Proteome Map CSGALNACT1 Human Proteome Map
InterPro Chond_GalNAc UniProtKB/Swiss-Prot
  Nucleotide-diphossugar_trans UniProtKB/Swiss-Prot
KEGG Report hsa:55790 UniProtKB/Swiss-Prot
NCBI Gene 55790 ENTREZGENE
OMIM 616615 OMIM
  618870 OMIM
Pfam CHGN UniProtKB/Swiss-Prot
PharmGKB PA162382829 PharmGKB
Superfamily-SCOP SSF53448 UniProtKB/Swiss-Prot
UniProt CGAT1_HUMAN UniProtKB/Swiss-Prot
  E5RGB2_HUMAN UniProtKB/TrEMBL
  E5RGK2_HUMAN UniProtKB/TrEMBL
  E5RJB6_HUMAN UniProtKB/TrEMBL
  E5RK93_HUMAN UniProtKB/TrEMBL
  Q8TDX6 ENTREZGENE
UniProt Secondary B2RBE4 UniProtKB/Swiss-Prot
  Q6P9G6 UniProtKB/Swiss-Prot
  Q8IUF9 UniProtKB/Swiss-Prot
  Q9NSQ7 UniProtKB/Swiss-Prot
  Q9NUM9 UniProtKB/Swiss-Prot