Symbol:
IL13
Name:
interleukin 13
RGD ID:
13900625
Description:
ENCODES a protein that exhibits interleukin-13 receptor binding (ortholog); INVOLVED IN negative regulation of complement-dependent cytotoxicity; negative regulation of endothelial cell apoptotic process; cellular response to mechanical stimulus (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); alcoholic hepatitis (ortholog); allergic conjunctivitis (ortholog); FOUND IN extracellular space (ortholog); INTERACTS WITH cadmium atom; cadmium dichloride; lipopolysaccharide
Type:
protein-coding
RefSeq Status:
PROVISIONAL
Previously known as:
IL-13; interleukin-13; L13
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
IL13 (interleukin 13) HGNC
Ensembl, Inparanoid, NCBI, OMA, OrthoDB
Mus musculus (house mouse):
Il13 (interleukin 13) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):
Il13 (interleukin 13) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):
Il13 (interleukin 13) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
IL13 (interleukin 13) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
IL13 (interleukin 13) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Il13 (interleukin 13) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
IL13 (interleukin 13) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Il13 (interleukin 13) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Latest Assembly:
Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 2 134,972,623 - 134,975,093 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 2 134,972,099 - 134,976,672 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 2 140,441,025 - 140,444,068 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Imported Annotations - SMPDB
IL13 Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 2 134,972,623 - 134,975,093 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 2 134,972,099 - 134,976,672 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 2 140,441,025 - 140,444,068 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
IL13 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 5 132,656,522 - 132,661,110 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 5 132,656,263 - 132,661,110 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 5 131,992,214 - 131,996,802 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 5 132,021,764 - 132,024,700 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 5 132,021,763 - 132,024,700 NCBI Celera 5 128,123,995 - 128,126,931 (+) NCBI Celera Cytogenetic Map 5 q31.1 NCBI HuRef 5 127,186,169 - 127,189,105 (+) NCBI HuRef CHM1_1 5 131,427,162 - 131,430,098 (+) NCBI CHM1_1 T2T-CHM13v2.0 5 133,176,323 - 133,180,911 (+) NCBI T2T-CHM13v2.0
Il13 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 11 53,522,150 - 53,525,529 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 11 53,522,151 - 53,525,529 (-) Ensembl GRCm39 Ensembl GRCm38 11 53,631,323 - 53,634,702 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 11 53,631,324 - 53,634,702 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 11 53,444,825 - 53,448,204 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 11 53,474,747 - 53,478,125 (-) NCBI MGSCv36 mm8 Celera 11 58,210,849 - 58,214,228 (-) NCBI Celera Cytogenetic Map 11 B1.3 NCBI cM Map 11 31.98 NCBI
Il13 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 10 38,290,926 - 38,293,483 (-) NCBI GRCr8 mRatBN7.2 10 37,790,130 - 37,792,687 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 10 37,790,130 - 37,792,737 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 10 42,482,076 - 42,484,637 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 10 41,972,140 - 41,974,701 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 10 37,475,862 - 37,478,423 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 10 38,982,909 - 38,985,466 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 10 38,982,909 - 38,985,466 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 10 38,764,639 - 38,767,196 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 10 39,093,512 - 39,096,069 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 10 39,102,758 - 39,105,316 (-) NCBI Celera 10 37,134,342 - 37,136,897 (-) NCBI Celera Cytogenetic Map 10 q22 NCBI
Il13 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 NW_004955408 4,046,406 - 4,049,795 (+) NCBI ChiLan1.0 ChiLan1.0
IL13 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 4 127,968,733 - 127,973,681 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 5 126,108,155 - 126,113,245 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 5 128,073,863 - 128,078,453 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 5 134,235,788 - 134,240,548 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 5 134,235,788 - 134,240,548 (+) Ensembl panpan1.1 panPan2
IL13 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 11 20,957,870 - 20,961,391 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 11 20,958,464 - 20,961,388 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 11 19,759,917 - 19,762,847 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 11 21,744,389 - 21,747,318 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 11 21,744,389 - 21,747,315 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 11 20,462,871 - 20,465,798 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 11 20,310,464 - 20,313,371 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 11 20,952,917 - 20,955,847 (+) NCBI UU_Cfam_GSD_1.0
Il13 Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024407213 115,527,018 - 115,529,671 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936647 2,530,491 - 2,532,373 (-) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936647 2,529,933 - 2,532,503 (-) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
IL13 Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 23 35,475,762 - 35,479,419 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 23 35,476,490 - 35,478,869 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666034 42,463,847 - 42,466,277 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Il13
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Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
5
1
7
3
1
4
2
7
2
3
Too many to show, limit is 500. Download them if you would like to view them all.
Ensembl Acc Id:
ENSSSCT00000033118 ⟹ ENSSSCP00000030285
Type:
CODING
Position:
Pig Assembly Chr Position (strand) Source Sscrofa11.1 Ensembl 2 134,972,623 - 134,975,093 (+) Ensembl
Ensembl Acc Id:
ENSSSCT00000067756 ⟹ ENSSSCP00000066932
Type:
CODING
Position:
Pig Assembly Chr Position (strand) Source Sscrofa11.1 Ensembl 2 134,972,672 - 134,975,093 (+) Ensembl
RefSeq Acc Id:
NM_213803 ⟹ NP_998968
RefSeq Status:
PROVISIONAL
Type:
CODING
Position:
Pig Assembly Chr Position (strand) Source Sscrofa11.1 2 134,972,623 - 134,975,093 (+) NCBI
Sequence:
CCAGCCTACAAGTCTGCTCCTCACTCCTCCTGTGCTGGCTCCAGGCTCCATGGCGCTCTGGTTGACTCTGGTCATTGCTCTCACCTGCTTTGGTGGCCTCGCCTCCCCAGGCCCTGTGCCTCCCCACT
hide sequence
RefSeq Acc Id:
XM_005661643 ⟹ XP_005661700
Type:
CODING
Position:
Pig Assembly Chr Position (strand) Source Sscrofa11.1 2 134,972,099 - 134,976,672 (+) NCBI
Sequence:
GGCCAACAGGGACTCAGATGGGCAAACGAAGTGGACTGCACTCTCCCCTTCTATCTGGTTCGAA
hide sequence
RefSeq Acc Id:
XM_021080318 ⟹ XP_020935977
Type:
CODING
Position:
Pig Assembly Chr Position (strand) Source Sscrofa11.1 2 134,972,664 - 134,976,672 (+) NCBI
Sequence:
CAGGCTCCATGGCGCTCTGGTTGACTCTGGTCATTGCTCTCACCTGCTTTGGTGGCCTCGCCTC
hide sequence
RefSeq Acc Id:
XM_021080328 ⟹ XP_020935987
Type:
CODING
Position:
Pig Assembly Chr Position (strand) Source Sscrofa11.1 2 134,972,664 - 134,976,672 (+) NCBI
Sequence:
CAGGCTCCATGGCGCTCTGGTTGACTCTGGTCATTGCTCTCACCTGCTTTGGTGGCCTCGCCTCCCCAGGCCCTGTGCCTCCCCACTCTACAGCCCTCAAGGAGCTCATTGAAGAGCTGGTCAATATC
hide sequence
RefSeq Acc Id:
XP_005661700 ⟸ XM_005661643
- Peptide Label:
isoform X3
- UniProtKB:
B3GDZ5 (UniProtKB/TrEMBL), A0A5G2QQC7 (UniProtKB/TrEMBL), A0A8D1VYU0 (UniProtKB/TrEMBL)
- Sequence:
MALWLTLVIALTCFGGLASPGPVPPHSTALKELIEELVNITQNQKTPLCNGSMVWSVNLTTSMYCAALESLINISDCSAIQKTQRMLSALCSHKPPSEQVPGKHIRDTKIEVAQFVKDLLKHLRMIFR
hide sequence
RefSeq Acc Id:
NP_998968 ⟸ NM_213803
- Peptide Label:
precursor
- UniProtKB:
Q95J68 (UniProtKB/Swiss-Prot), A0A5G2QQC7 (UniProtKB/TrEMBL), A0A8D1VYU0 (UniProtKB/TrEMBL)
- Sequence:
MALWLTLVIALTCFGGLASPGPVPPHSTALKELIEELVNITQNQKTPLCNGSMVWSVNLTTSMQ
hide sequence
RefSeq Acc Id:
XP_020935977 ⟸ XM_021080318
- Peptide Label:
isoform X1
- UniProtKB:
A0A8D1K6G9 (UniProtKB/TrEMBL), A0A8D0UW48 (UniProtKB/TrEMBL)
- Sequence:
MAMASFTQNLSPHWLCHSHFPLPAPRSCTTGLPHCEEQGTKFRNSEGPRPAPALLGMLGGLSGGRPGTLPALSLLSSAPQTPLCNGSMVWSVNLTTSMQYCAALESLINISDCSAIQKTQRMLSALCS
hide sequence
RefSeq Acc Id:
XP_020935987 ⟸ XM_021080328
- Peptide Label:
isoform X2
- UniProtKB:
A0A8D0UW48 (UniProtKB/TrEMBL)
- Sequence:
MAMASFTQNLSPHWLCHSHFPLPAPRSCTTGLPHCEEQGTKFRNSEGPRPAPALLGMLGGLSGG
hide sequence
Ensembl Acc Id:
ENSSSCP00000066932 ⟸ ENSSSCT00000067756
Ensembl Acc Id:
ENSSSCP00000030285 ⟸ ENSSSCT00000033118
