Symbol: |
CAV3 |
Name: |
caveolin 3 |
RGD ID: |
12413272 |
Description: |
ENCODES a protein that exhibits enzyme binding (ortholog); molecular adaptor activity (ortholog); nitric-oxide synthase binding (ortholog); INVOLVED IN cell differentiation (ortholog); cellular response to ionomycin (ortholog); establishment of localization in cell (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH Atrioventricular Septal Defect 2 (ortholog); Cardiomegaly (ortholog); cardiomyopathy (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog); intercalated disc (ortholog) |
Type: |
protein-coding
|
RefSeq Status: |
VALIDATED |
Previously known as: |
caveolin-3 |
RGD Orthologs |
|
Alliance Orthologs |
|
More Info |
more info ...
|
More Info |
Species |
Gene symbol and name |
Data Source |
Assertion derived from |
less info ...
|
Orthologs 1 |
Homo sapiens (human): |
CAV3 (caveolin 3) |
HGNC |
EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam |
Mus musculus (house mouse): |
Cav3 (caveolin 3) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
Rattus norvegicus (Norway rat): |
Cav3 (caveolin 3) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
Chinchilla lanigera (long-tailed chinchilla): |
Cav3 (caveolin 3) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
Pan paniscus (bonobo/pygmy chimpanzee): |
CAV3 (caveolin 3) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
Ictidomys tridecemlineatus (thirteen-lined ground squirrel): |
Cav3 (caveolin 3) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
Sus scrofa (pig): |
CAV3 (caveolin 3) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
Chlorocebus sabaeus (green monkey): |
CAV3 (caveolin 3) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
Heterocephalus glaber (naked mole-rat): |
Cav3 (caveolin 3) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
|
Latest Assembly: |
CanFam3.1 - Dog CanFam3.1 Assembly |
Position: |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 20 | 9,384,901 - 9,398,055 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 20 | 9,384,901 - 9,401,196 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 20 | 9,418,382 - 9,431,544 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 20 | 9,414,987 - 9,428,087 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 20 | 9,414,987 - 9,428,087 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 20 | 9,136,869 - 9,150,024 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 20 | 9,481,732 - 9,494,836 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 20 | 9,455,880 - 9,468,982 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
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Imported Annotations - PID (archival)
CAV3 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 20 | 9,384,901 - 9,398,055 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 20 | 9,384,901 - 9,401,196 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 20 | 9,418,382 - 9,431,544 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 20 | 9,414,987 - 9,428,087 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 20 | 9,414,987 - 9,428,087 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 20 | 9,136,869 - 9,150,024 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 20 | 9,481,732 - 9,494,836 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 20 | 9,455,880 - 9,468,982 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
CAV3 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 3 | 8,733,802 - 8,746,758 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 3 | 8,733,802 - 8,841,808 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 3 | 8,775,488 - 8,788,444 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 3 | 8,750,496 - 8,763,451 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 3 | 8,750,495 - 8,763,450 | NCBI | | | | | Celera | 3 | 8,710,271 - 8,723,238 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | p25.3 | NCBI | | | | | HuRef | 3 | 8,709,553 - 8,722,499 (+) | NCBI | | HuRef | | | CHM1_1 | 3 | 8,725,885 - 8,738,871 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 3 | 8,724,971 - 8,737,928 (+) | NCBI | | T2T-CHM13v2.0 | | |
|
Cav3 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 6 | 112,436,466 - 112,449,833 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 6 | 112,436,466 - 112,449,833 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 6 | 112,459,505 - 112,472,872 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 6 | 112,459,505 - 112,472,872 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 6 | 112,409,499 - 112,422,866 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 6 | 112,425,278 - 112,438,649 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 6 | 114,297,536 - 114,310,896 (+) | NCBI | | Celera | | | Cytogenetic Map | 6 | E3 | NCBI | | | | | cM Map | 6 | 52.26 | NCBI | | | | |
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Cav3 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 4 | 147,137,993 - 147,153,967 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 4 | 145,582,168 - 145,598,142 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 4 | 145,582,060 - 145,598,137 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 4 | 150,974,343 - 150,990,337 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 4 | 146,755,146 - 146,771,143 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 4 | 145,376,415 - 145,392,431 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 4 | 144,382,945 - 144,398,919 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 4 | 144,382,945 - 144,398,917 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 4 | 207,683,202 - 207,699,176 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 4 | 148,294,428 - 148,310,380 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 4 | 148,539,268 - 148,555,221 (+) | NCBI | | | | | Celera | 4 | 134,152,488 - 134,168,462 (+) | NCBI | | Celera | | | Cytogenetic Map | 4 | q41 | NCBI | | | | |
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Cav3 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955561 | 325,944 - 335,914 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955561 | 326,008 - 335,911 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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CAV3 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 2 | 8,744,068 - 8,760,421 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 3 | 8,748,826 - 8,765,179 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 3 | 8,684,829 - 8,697,731 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 3 | 8,928,069 - 8,940,942 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 3 | 8,928,069 - 8,940,942 (+) | Ensembl | panpan1.1 | | panPan2 | |
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Cav3 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024404942 | 14,631,527 - 14,644,827 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936602 | 4,264,889 - 4,278,161 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936602 | 4,264,896 - 4,278,160 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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CAV3 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 13 | 65,117,795 - 65,131,273 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 13 | 65,117,868 - 65,130,886 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 13 | 72,400,156 - 72,412,174 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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CAV3 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 22 | 44,726,597 - 44,740,456 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 22 | 44,727,624 - 44,740,459 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666041 | 121,826,639 - 121,839,504 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Cav3 (Heterocephalus glaber - naked mole-rat) |
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.
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alimentary part of gastrointestinal system
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3
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2
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5
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11
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12
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9
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2
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4
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2
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1
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21
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17
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8
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13
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7
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Ensembl Acc Id: |
ENSCAFT00000008956 ⟹ ENSCAFP00000008308 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
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CanFam3.1 Ensembl | 20 | 9,384,901 - 9,401,196 (-) | Ensembl |
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Ensembl Acc Id: |
ENSCAFT00845018664 ⟹ ENSCAFP00845014569 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
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ROS_Cfam_1.0 Ensembl | 20 | 9,414,987 - 9,428,087 (-) | Ensembl |
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RefSeq Acc Id: |
NM_001287073 ⟹ NP_001274002 |
RefSeq Status: |
VALIDATED |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
---|
CanFam3.1 | 20 | 9,384,901 - 9,398,055 (-) | NCBI | Dog10K_Boxer_Tasha | 20 | 9,418,382 - 9,431,544 (-) | NCBI | ROS_Cfam_1.0 | 20 | 9,414,987 - 9,428,087 (-) | NCBI | UMICH_Zoey_3.1 | 20 | 9,136,869 - 9,150,024 (-) | NCBI | UNSW_CanFamBas_1.0 | 20 | 9,481,732 - 9,494,836 (-) | NCBI | UU_Cfam_GSD_1.0 | 20 | 9,455,880 - 9,468,982 (-) | NCBI |
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Sequence: |
GACCGTGTCCCTGGCCCGAGCCTTTTCAGCCCCGCCGGCCACACGGCACAGGTCCCCTCCTGCGGCCCCCAGCCCCGCGATGATGGCCGAAGAGCACACAGACCTGGAGGCCCAGATCGTCAAGGACA TCCACTTCAAGGAGATCGACCTGGTGAACCGAGACCCCAAGAACATCAACGAGGACATAGTGAAGGTGGATTTCGAAGACGTGATCGCAGAGCCTGTGGGCACGTACAGTTTTGACGGCGTGTGGAAA GTGAGCTACACCACCTTCACCGTCTCCAAGTACTGGTGCTACCGCCTGCTGTCCACGCTGCTGGGGGTCCCGCTGGCCCTGCTCTGGGGCTTCCTGTTCGCCTGCATCTCTTTCTGCCACATCTGGGC GGTGGTGCCATGCATTAAGAGCTACCTGATTGAGATCCAGTGCATCAGCCACATCTACTCCCTCTGCATCCGTACCTTCTGCAACCCGCTCTTTGCCGCCCTGGGCCAGATCTGCAGCAACATCAAGG TGATGCTGCGGAAGGAAGTGTAAAGCCAGGTGGGGGCGAGGGGGGTGGCCGGGCAGGGGGAGTCAGGCCAGGCTGGCCCCCCACGGCACTGCTCCATGGGCCTGCTGGTGAGCGCTTGCTCTTTAGGG ACTGCTATTTCCCCCCCAAGACACACAGTTTAGGGAAGCAAGCAAGAAAAGAGCCCTGCCACAGAAGCACAGTGGCCCTTCACTCTGCCCCCTACCCCACCTAGATGCCTCCGTGACCGGGCATGAGG AACGATAATTTGCTAAGAGGCAGCTACTGCAAGTCTTTGCATTCACTTGTACTGTAACAGCATAAACCAGCACTCGGTTCCCACCTGGGGTCAACCCATCCGTGCATGCCACCCGGGAAAGCTACCAG TGACTCTTGGCATTAGAAGGGTGGCTCCAATAAACGGTTTCGGTTGCATTTCGGGAA
hide sequence
|
RefSeq Acc Id: |
NP_001274002 ⟸ NM_001287073 |
- UniProtKB: |
Q3HTT5 (UniProtKB/TrEMBL), A0A8C0TW67 (UniProtKB/TrEMBL), A0A8C0QY57 (UniProtKB/TrEMBL), A0A8I3NGG6 (UniProtKB/TrEMBL) |
- Sequence: |
MMAEEHTDLEAQIVKDIHFKEIDLVNRDPKNINEDIVKVDFEDVIAEPVGTYSFDGVWKVSYTTFTVSKYWCYRLLSTLLGVPLALLWGFLFACISFCHIWAVVPCIKSYLIEIQCISHIYSLCIRTF CNPLFAALGQICSNIKVMLRKEV
hide sequence
|
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Ensembl Acc Id: |
ENSCAFP00000008308 ⟸ ENSCAFT00000008956 |
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Ensembl Acc Id: |
ENSCAFP00845014569 ⟸ ENSCAFT00845018664 |
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RGD ID: | 13686796 |
Promoter ID: | EPDNEW_C4864 |
Type: | single initiation site |
Name: | CAV3_1 |
Description: | caveolin 3 |
SO ACC ID: | SO:0000170 |
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) |
Experiment Methods: | Single-end sequencing. |
Position: | Dog Assembly | Chr | Position (strand) | Source |
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CanFam3.1 | 20 | 9,398,034 - 9,398,094 | EPDNEW |
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