CAV3 (caveolin 3) - Rat Genome Database

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Gene: CAV3 (caveolin 3) Canis lupus familiaris
Analyze
Symbol: CAV3
Name: caveolin 3
RGD ID: 12413272
Description: ENCODES a protein that exhibits enzyme binding (ortholog); molecular adaptor activity (ortholog); nitric-oxide synthase binding (ortholog); INVOLVED IN cell differentiation (ortholog); cellular response to ionomycin (ortholog); establishment of localization in cell (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH Atrioventricular Septal Defect 2 (ortholog); Cardiomegaly (ortholog); cardiomyopathy (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog); intercalated disc (ortholog)
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: caveolin-3
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1209,384,901 - 9,398,055 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl209,384,901 - 9,401,196 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha209,418,382 - 9,431,544 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0209,414,987 - 9,428,087 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl209,414,987 - 9,428,087 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1209,136,869 - 9,150,024 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0209,481,732 - 9,494,836 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0209,455,880 - 9,468,982 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
CAV3DogExperimental Autoimmune Encephalomyelitis onsetISOCav3 (Rattus norvegicus)9068941Protein:increased expression:spinal cord and astrocyteRGDPMID:15925413 and REF_RGD_ID:1582168
CAV3Dogmuscular dystrophy susceptibilityISOCAV3 (Homo sapiens)9068941DNA:missense mutation and deletionRGDPMID:9537420 and REF_RGD_ID:1599529
CAV3Dogmyocardial infarction  ISOCav3 (Rattus norvegicus)9068941mRNA more ...RGDPMID:29438664 and REF_RGD_ID:126925221
CAV3Dogmyocardial infarction  ISOCav3 (Rattus norvegicus)9068941Protein:increased expression:cytosolRGDPMID:12566108 and REF_RGD_ID:1599542
1 to 20 of 22 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
CAV3DogAtrioventricular Septal Defect 2  ISOCAV3 (Homo sapiens)8554872ClinVar Annotator: match by term: Atrioventricular septal defect more ...ClinVarPMID:28492532
CAV3Dogcardiomyopathy  ISOCAV3 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:09536092 more ...
CAV3Dogdistal myopathy Tateyama type  ISOCAV3 (Homo sapiens)8554872ClinVar Annotator: match by term: Distal myopathy and Tateyama typeClinVarPMID:09536092 more ...
CAV3Dogfamilial hypertrophic cardiomyopathy  ISOCAV3 (Homo sapiens)8554872ClinVar Annotator: match by term: Primary familial hypertrophic cardiomyopathyClinVarPMID:14672715 and PMID:15580566
CAV3Doghypertrophic cardiomyopathy  ISOCAV3 (Homo sapiens)8554872ClinVar Annotator: match by term: Hypertrophic cardiomyopathyClinVarPMID:15580566 more ...
CAV3Doghypertrophic cardiomyopathy 1  ISOCAV3 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:09536092 more ...
CAV3Doghypertrophic cardiomyopathy 1  ISOCAV3 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:09536092 more ...
CAV3Doghypertrophic cardiomyopathy 1  ISOCAV3 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:09536092 more ...
CAV3Doghypertrophic cardiomyopathy 1  ISOCAV3 (Homo sapiens)8554872ClinVar Annotator: match by term: Hypertrophic cardiomyopathy 1ClinVarPMID:09536092 more ...
CAV3Dogisolated elevated serum creatine phosphokinase levels  ISOCAV3 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:09536092 more ...
CAV3DogJoubert syndrome 9  ISOCAV3 (Homo sapiens)8554872ClinVar Annotator: match by term: Joubert syndrome 9ClinVar 
CAV3Doglimb-girdle muscular dystrophy  ISOCAV3 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:09536092 more ...
CAV3Doglong QT syndrome  ISOCAV3 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:09536092 more ...
CAV3Doglong QT syndrome  ISOCAV3 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:09536092 more ...
CAV3Doglong QT syndrome  ISOCAV3 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:09536092 more ...
CAV3Doglong QT syndrome 1  ISOCAV3 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:09536092 more ...
CAV3Doglong QT syndrome 9  ISOCAV3 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:09536092 more ...
CAV3DogNeurodevelopmental Disorders  ISOCAV3 (Homo sapiens)8554872ClinVar Annotator: match by term: Neurodevelopmental disorderClinVarPMID:25741868
CAV3Dogrippling muscle disease 2  ISOCAV3 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:09536092 more ...
CAV3DogRomano-Ward Syndrome  ISOCAV3 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:14672715 more ...
1 to 20 of 22 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
CAV3DogCardiomegaly  ISOCAV3 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:19299911
CAV3DogChromosome 3, Monosomy 3p25  ISOCAV3 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:21082655
CAV3Dogcongenital heart disease  ISOCAV3 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:21082655
CAV3DogExperimental Diabetes Mellitus  ISOCAV3 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:18266981
CAV3Dogrippling muscle disease 1  ISOCAV3 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:11431690 more ...


Biological Process
1 to 20 of 70 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
CAV3Dogactin filament organization acts_upstream_of_or_withinIEAUniProtKB:P51637 and ensembl:ENSMUSP00000074922150520179 EnsemblGO_REF:0000107
CAV3Dogcalcium ion transport acts_upstream_ofIEAUniProtKB:P51637 and ensembl:ENSMUSP00000074922150520179 EnsemblGO_REF:0000107
CAV3Dogcardiac muscle cell development acts_upstream_of_or_withinIEAUniProtKB:P51637 and ensembl:ENSMUSP00000074922150520179 EnsemblGO_REF:0000107
CAV3Dogcardiac muscle hypertrophy acts_upstream_ofIEAUniProtKB:P51637 and ensembl:ENSMUSP00000074922150520179 EnsemblGO_REF:0000107
CAV3Dogcaveola assembly involved_inIBAMGI:102709 more ...150520179 GO_CentralGO_REF:0000033
CAV3Dogcaveola assembly acts_upstream_of_or_withinIEAUniProtKB:P51637 more ...150520179 EnsemblGO_REF:0000107
CAV3Dogcaveola assembly involved_inIEAInterPro:IPR001612150520179 InterProGO_REF:0000002
CAV3Dogcell differentiation  ISOCav3 (Rattus norvegicus)9068941 RGDPMID:16135403 and REF_RGD_ID:1599539
CAV3Dogcell differentiation involved_inIBAMGI:102709 more ...150520179 GO_CentralGO_REF:0000033
CAV3Dogcellular response to ionomycin  ISOCav3 (Rattus norvegicus)9068941 RGDPMID:15725944 and REF_RGD_ID:1599540
CAV3Dogcholesterol homeostasis acts_upstream_of_or_withinIEAUniProtKB:P51637 and ensembl:ENSMUSP00000074922150520179 EnsemblGO_REF:0000107
CAV3Dogcytoplasmic microtubule organization acts_upstream_of_or_withinIEAUniProtKB:P51637 and ensembl:ENSMUSP00000074922150520179 EnsemblGO_REF:0000107
CAV3Dogdetection of muscle stretch involved_inIEAUniProtKB:P51637 and ensembl:ENSMUSP00000074922150520179 EnsemblGO_REF:0000107
CAV3Dogendocytosis acts_upstream_of_or_withinIEAUniProtKB:P51637 and ensembl:ENSMUSP00000074922150520179 EnsemblGO_REF:0000107
CAV3Dogestablishment of localization in cell acts_upstream_of_or_withinIEAUniProtKB:P51637 and ensembl:ENSMUSP00000074922150520179 EnsemblGO_REF:0000107
CAV3Dogestablishment of localization in cell acts_upstream_ofISOCav3 (Mus musculus)9068941 PMID:21084288MGIPMID:21084288
CAV3Dogglucose homeostasis acts_upstream_of_or_withinIEAUniProtKB:P51637 and ensembl:ENSMUSP00000074922150520179 EnsemblGO_REF:0000107
CAV3Dogheart trabecula formation acts_upstream_of_or_withinIEAUniProtKB:P51637 and ensembl:ENSMUSP00000074922150520179 EnsemblGO_REF:0000107
CAV3DogMAPK cascade acts_upstream_ofIEAUniProtKB:P51637 and ensembl:ENSMUSP00000074922150520179 EnsemblGO_REF:0000107
CAV3Dogmembrane raft organization acts_upstream_of_or_withinIEAUniProtKB:P51637 and ensembl:ENSMUSP00000074922150520179 EnsemblGO_REF:0000107
1 to 20 of 70 rows

Cellular Component
1 to 20 of 27 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
CAV3Dogcaveola  ISOCav3 (Rattus norvegicus)9068941 RGDPMID:16135403 more ...
CAV3Dogcaveola located_inIEAUniProtKB-SubCell:SL-0035150520179 UniProtGO_REF:0000044
CAV3Dogcaveola located_inIEAUniProtKB:P51637 and ensembl:ENSMUSP00000074922150520179 EnsemblGO_REF:0000107
CAV3Dogcell surface  ISOCav3 (Rattus norvegicus)9068941 RGDPMID:12649076 and REF_RGD_ID:1299267
CAV3Dogdystrophin-associated glycoprotein complex part_ofIEAUniProtKB:P56539 and ensembl:ENSP00000341940150520179 EnsemblGO_REF:0000107
CAV3Dogendoplasmic reticulum located_inIEAUniProtKB:P56539 and ensembl:ENSP00000341940150520179 EnsemblGO_REF:0000107
CAV3Dogfocal adhesion located_inIBAMGI:102709 more ...150520179 GO_CentralGO_REF:0000033
CAV3DogGolgi apparatus located_inIEAUniProtKB-KW:KW-0333150520179 UniProtGO_REF:0000043
CAV3DogGolgi membrane located_inIEAUniProtKB-SubCell:SL-0134150520179 UniProtGO_REF:0000044
CAV3Dogintercalated disc located_inISOCav3 (Rattus norvegicus)9068941 RGDPMID:15961389 and REF_RGD_ID:1598749
CAV3Dogintracellular membrane-bounded organelle located_inIEAUniProtKB:P56539 and ensembl:ENSP00000341940150520179 EnsemblGO_REF:0000107
CAV3Dogmembrane located_inIEAUniProtKB:P51637 and ensembl:ENSMUSP00000074922150520179 EnsemblGO_REF:0000107
CAV3Dogmembrane located_inIEAUniProtKB-KW:KW-0472150520179 UniProtGO_REF:0000043
CAV3Dogmembrane raft located_inIEAUniProtKB:P51637 and ensembl:ENSMUSP00000074922150520179 EnsemblGO_REF:0000107
CAV3Dogneuromuscular junction  ISOCav3 (Rattus norvegicus)9068941 RGDPMID:12923236 and REF_RGD_ID:1600290
CAV3Dogplasma membrane located_inIEAUniProtKB-KW:KW-1003150520179 UniProtGO_REF:0000043
CAV3Dogplasma membrane located_inIEAUniProtKB-SubCell:SL-0039150520179 UniProtGO_REF:0000044
CAV3Dogplasma membrane located_inIEAARBA:ARBA00027801150520179 UniProtGO_REF:0000117
CAV3Dogplasma membrane located_inIEAUniProtKB:P51637 more ...150520179 EnsemblGO_REF:0000107
CAV3Dogprotein-containing complex  ISOCav3 (Rattus norvegicus)9068941 RGDPMID:12649076 more ...
1 to 20 of 27 rows

Molecular Function
1 to 20 of 39 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
CAV3Dogalpha-tubulin binding enablesIEAUniProtKB:P51637 and ensembl:ENSMUSP00000074922150520179 EnsemblGO_REF:0000107
CAV3Dogcalcium channel regulator activity enablesIEAUniProtKB:P56539 and ensembl:ENSP00000341940150520179 EnsemblGO_REF:0000107
CAV3Dogconnexin binding enablesIEAUniProtKB:P51637 more ...150520179 EnsemblGO_REF:0000107
CAV3Dogenzyme binding  ISOPtgs2 (Rattus norvegicus)9068941 RGDPMID:16479074 and REF_RGD_ID:1600265
CAV3Dogmolecular adaptor activity  ISOCav3 (Rattus norvegicus)9068941 RGDPMID:15961389 and REF_RGD_ID:1598749
CAV3Dogmolecular adaptor activity enablesIBAMGI:102709 more ...150520179 GO_CentralGO_REF:0000033
CAV3Dogmolecular adaptor activity enablesIEAUniProtKB:P56539 and ensembl:ENSP00000341940150520179 EnsemblGO_REF:0000107
CAV3Dognitric-oxide synthase binding  ISONos3 (Rattus norvegicus)9068941 RGDPMID:15007069 more ...
CAV3Dogpotassium channel inhibitor activity enablesISOCav3 (Rattus norvegicus)9068941PMID:22879586BHF-UCLPMID:22879586 and REF_RGD_ID:8553349
CAV3Dogprotein binding enablesISOPR:P152089068941 PMID:16455755MGIPMID:16455755
CAV3Dogprotein binding enablesISOPR:P115319068941 PMID:8663016MGIPMID:8663016
CAV3Dogprotein binding enablesISOUniProtKB:Q018159068941 PMID:24952909IntActPMID:24952909
CAV3Dogprotein binding enablesISOUniProtKB:P18762 and UniProtKB:Q018159068941 PMID:16648270IntActPMID:16648270
CAV3Dogprotein binding enablesISOUniProtKB:Q5SUG4 and UniProtKB:Q6PE929068941 PMID:21084288IntActPMID:21084288
CAV3Dogprotein binding enablesISOUniProtKB:Q9ES839068941 PMID:24066022UniProtPMID:24066022
CAV3Dogprotein binding enablesISOPR:P51637 and UniProtKB:P516389068941 PMID:10988290MGIPMID:10988290
CAV3Dogprotein binding enablesISOUniProtKB:O95810 more ...9068941 PMID:24567387UniProtPMID:24567387
CAV3Dogprotein binding enablesISOUniProtKB:Q8N0V3 and UniProtKB:Q96AL59068941 PMID:32296183IntActPMID:32296183
CAV3Dogprotein binding enablesISOUniProtKB:Q5BKX89068941 PMID:26497963UniProtPMID:26497963
CAV3Dogprotein binding enablesISOPR:Q61762 and PR:Q811D09068941 PMID:15277200MGIPMID:15277200
1 to 20 of 39 rows

Imported Annotations - PID (archival)

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
CAV3Dogplatelet-derived growth factor signaling pathway  ISOCAV3 (Homo sapiens)9068941 PIDPID:200162
PMID:22301074   PMID:30032202  



CAV3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1209,384,901 - 9,398,055 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl209,384,901 - 9,401,196 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha209,418,382 - 9,431,544 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0209,414,987 - 9,428,087 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl209,414,987 - 9,428,087 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1209,136,869 - 9,150,024 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0209,481,732 - 9,494,836 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0209,455,880 - 9,468,982 (-)NCBIUU_Cfam_GSD_1.0
CAV3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3838,733,802 - 8,746,758 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl38,733,802 - 8,841,808 (+)EnsemblGRCh38hg38GRCh38
GRCh3738,775,488 - 8,788,444 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3638,750,496 - 8,763,451 (+)NCBINCBI36Build 36hg18NCBI36
Build 3438,750,495 - 8,763,450NCBI
Celera38,710,271 - 8,723,238 (+)NCBICelera
Cytogenetic Map3p25.3NCBI
HuRef38,709,553 - 8,722,499 (+)NCBIHuRef
CHM1_138,725,885 - 8,738,871 (+)NCBICHM1_1
T2T-CHM13v2.038,724,971 - 8,737,928 (+)NCBIT2T-CHM13v2.0
Cav3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396112,436,466 - 112,449,833 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6112,436,466 - 112,449,833 (+)EnsemblGRCm39 Ensembl
GRCm386112,459,505 - 112,472,872 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6112,459,505 - 112,472,872 (+)EnsemblGRCm38mm10GRCm38
MGSCv376112,409,499 - 112,422,866 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366112,425,278 - 112,438,649 (+)NCBIMGSCv36mm8
Celera6114,297,536 - 114,310,896 (+)NCBICelera
Cytogenetic Map6E3NCBI
cM Map652.26NCBI
Cav3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84147,137,993 - 147,153,967 (+)NCBIGRCr8
mRatBN7.24145,582,168 - 145,598,142 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4145,582,060 - 145,598,137 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4150,974,343 - 150,990,337 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04146,755,146 - 146,771,143 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04145,376,415 - 145,392,431 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04144,382,945 - 144,398,919 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4144,382,945 - 144,398,917 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04207,683,202 - 207,699,176 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44148,294,428 - 148,310,380 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14148,539,268 - 148,555,221 (+)NCBI
Celera4134,152,488 - 134,168,462 (+)NCBICelera
Cytogenetic Map4q41NCBI
Cav3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955561325,944 - 335,914 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955561326,008 - 335,911 (+)NCBIChiLan1.0ChiLan1.0
CAV3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v228,744,068 - 8,760,421 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan138,748,826 - 8,765,179 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v038,684,829 - 8,697,731 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.138,928,069 - 8,940,942 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl38,928,069 - 8,940,942 (+)Ensemblpanpan1.1panPan2
Cav3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494214,631,527 - 14,644,827 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366024,264,889 - 4,278,161 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366024,264,896 - 4,278,160 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CAV3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1365,117,795 - 65,131,273 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11365,117,868 - 65,130,886 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21372,400,156 - 72,412,174 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CAV3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12244,726,597 - 44,740,456 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2244,727,624 - 44,740,459 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041121,826,639 - 121,839,504 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cav3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247313,347,984 - 3,364,581 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247313,348,172 - 3,363,772 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in CAV3
178 total Variants



adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
3 2 5 11 12 9 2 4 2 1 21 17 8 13 7



Ensembl Acc Id: ENSCAFT00000008956   ⟹   ENSCAFP00000008308
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl209,384,901 - 9,401,196 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845018664   ⟹   ENSCAFP00845014569
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl209,414,987 - 9,428,087 (-)Ensembl
RefSeq Acc Id: NM_001287073   ⟹   NP_001274002
RefSeq Status: VALIDATED
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1209,384,901 - 9,398,055 (-)NCBI
Dog10K_Boxer_Tasha209,418,382 - 9,431,544 (-)NCBI
ROS_Cfam_1.0209,414,987 - 9,428,087 (-)NCBI
UMICH_Zoey_3.1209,136,869 - 9,150,024 (-)NCBI
UNSW_CanFamBas_1.0209,481,732 - 9,494,836 (-)NCBI
UU_Cfam_GSD_1.0209,455,880 - 9,468,982 (-)NCBI
Sequence:
Protein RefSeqs NP_001274002 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein ABA40756 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000008308.5
  ENSCAFP00030015518.1
  ENSCAFP00040041209.1
  ENSCAFP00845014569
  ENSCAFP00845014569.1
RefSeq Acc Id: NP_001274002   ⟸   NM_001287073
- UniProtKB: Q3HTT5 (UniProtKB/TrEMBL),   A0A8C0TW67 (UniProtKB/TrEMBL),   A0A8C0QY57 (UniProtKB/TrEMBL),   A0A8I3NGG6 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCAFP00000008308   ⟸   ENSCAFT00000008956
Ensembl Acc Id: ENSCAFP00845014569   ⟸   ENSCAFT00845018664

RGD ID:13686796
Promoter ID:EPDNEW_C4864
Type:single initiation site
Name:CAV3_1
Description:caveolin 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1209,398,034 - 9,398,094EPDNEW


1 to 22 of 22 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSCAFG00000005557 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030009598 UniProtKB/TrEMBL
  ENSCAFG00040025323 UniProtKB/TrEMBL
  ENSCAFG00845010595 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000008956.5 UniProtKB/TrEMBL
  ENSCAFT00030017771.1 UniProtKB/TrEMBL
  ENSCAFT00040047206.1 UniProtKB/TrEMBL
  ENSCAFT00845018664 ENTREZGENE
  ENSCAFT00845018664.1 UniProtKB/TrEMBL
InterPro Caveolin UniProtKB/TrEMBL
  Caveolin_CS UniProtKB/TrEMBL
KEGG Report cfa:484671 UniProtKB/TrEMBL
NCBI Gene CAV3 ENTREZGENE
PANTHER PTHR10844 UniProtKB/TrEMBL
  PTHR10844:SF16 UniProtKB/TrEMBL
Pfam Caveolin UniProtKB/TrEMBL
PROSITE CAVEOLIN UniProtKB/TrEMBL
UniProt A0A8C0QY57 ENTREZGENE
  A0A8C0TW67 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NGG6 ENTREZGENE, UniProtKB/TrEMBL
  Q3HTT5 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:38753 ENTREZGENE
1 to 22 of 22 rows