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ONTOLOGY REPORT - ANNOTATIONS


Term:heart valve formation
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Accession:GO:0003188 term browser browse the term
Definition:The developmental process pertaining to the initial formation of a heart valve from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable.



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heart valve formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scx scleraxis bHLH transcription factor involved_in ISO (PMID:18802027) RGD PMID:18802027 NCBI chr 7:108,176,608...108,178,626 JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO MGI:2385468|MGI:2450311 (PMID:17350610) RGD PMID:17350610 NCBI chr10:98,305,744...98,311,250 JBrowse link
aortic valve formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh11 cadherin 11 involved_in ISO UniProtKB:P61586 (PMID:26188246) RGD PMID:26188246 NCBI chr19:2,148,447...2,305,754 JBrowse link
G Rhoa ras homolog family member A involved_in ISO
IEA
UniProtKB:F1RFU7 (PMID:26188246)
GO_REF:0000107
RGD
Ensembl
PMID:26188246 GO_REF:0000107 NCBI chr 8:117,870,548...117,904,303 JBrowse link
atrioventricular valve formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata4 GATA binding protein 4 involved_in ISO UniProtKB:P97471 (PMID:21330551) RGD PMID:21330551 NCBI chr15:41,635,572...41,707,252 JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 involved_in ISO (PMID:17259303) RGD PMID:17259303 NCBI chr 2:93,096,605...93,100,316 JBrowse link
G Olfm1 olfactomedin 1 involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 3:11,520,522...11,558,240 JBrowse link
G Smad4 SMAD family member 4 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:Q08369 (PMID:21330551)
Ensembl
RGD
PMID:21330551 GO_REF:0000107 NCBI chr18:69,518,988...69,549,684 JBrowse link
endocardial cushion to mesenchymal transition involved in heart valve formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Efna1 ephrin A1 involved_in ISO (PMID:20960543) RGD PMID:20960543 NCBI chr 2:174,681,676...174,689,061 JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 acts_upstream_of_or_within ISO MGI:1341884 (PMID:15680351) RGD PMID:15680351 NCBI chr 2:93,096,605...93,100,316 JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 acts_upstream_of_or_within ISO MGI:1341800 (PMID:15680351) RGD PMID:15680351 NCBI chr 1:26,822,131...26,832,218 JBrowse link
mitral valve formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dchs1 dachsous cadherin-related 1 involved_in ISO (PMID:26258302) RGD PMID:26258302 NCBI chr 1:160,104,931...160,138,958 JBrowse link
G Notch1 notch receptor 1 involved_in ISO (PMID:16025100) RGD PMID:16025100 NCBI chr 3:29,676,040...29,721,613 JBrowse link
G Zfpm1 zinc finger protein, multitype 1 involved_in ISO (PMID:14614148) RGD PMID:14614148 NCBI chr19:50,334,352...50,391,029 JBrowse link
positive regulation of endocardial cushion to mesenchymal transition involved in heart valve formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Twist1 twist family bHLH transcription factor 1 involved_in ISO (PMID:20804746) RGD PMID:20804746 NCBI chr 6:50,674,910...50,676,904 JBrowse link
pulmonary valve formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gja5 gap junction protein, alpha 5 involved_in ISO (PMID:22199024) RGD PMID:22199024 NCBI chr 2:187,291,227...187,310,770 JBrowse link
G Tbx20 T-box transcription factor 20 involved_in ISO (PMID:15843409) RGD PMID:15843409 NCBI chr 8:23,200,104...23,258,218 JBrowse link
tricuspid valve formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 acts_upstream_of_or_within ISO MGI:3574394 (PMID:15297376) RGD PMID:15297376 NCBI chr 1:26,822,131...26,832,218 JBrowse link
G Zfpm1 zinc finger protein, multitype 1 involved_in ISO (PMID:14614148) RGD PMID:14614148 NCBI chr19:50,334,352...50,391,029 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20534
    developmental process 7107
      anatomical structure formation involved in morphogenesis 1379
        heart valve formation 16
          aortic valve formation 2
          atrioventricular valve formation + 8
          coronary sinus valve formation 0
          endocardial cushion to mesenchymal transition involved in heart valve formation + 4
          pulmonary valve formation 2
          sinoatrial valve formation 0
          ventriculo bulbo valve formation 0
Path 2
Term Annotations click to browse term
  biological_process 20534
    developmental process 7107
      anatomical structure development 6609
        multicellular organism development 5329
          system development 4611
            circulatory system development 1378
              heart development 746
                heart valve development 71
                  heart valve morphogenesis 59
                    heart valve formation 16
                      aortic valve formation 2
                      atrioventricular valve formation + 8
                      coronary sinus valve formation 0
                      endocardial cushion to mesenchymal transition involved in heart valve formation + 4
                      pulmonary valve formation 2
                      sinoatrial valve formation 0
                      ventriculo bulbo valve formation 0
paths to the root