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ONTOLOGY REPORT - ANNOTATIONS

Term:gastrulation with mouth forming second
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Accession:GO:0001702 term browser browse the term
Definition:A gastrulation process in which the initial invagination becomes the anus and the mouth forms second.
Synonyms:exact_synonym: deuterostomic gastrulation
 alt_id: GO:0010003;   GO:0048276
 only_in_taxon: NCBITaxon:33511 ! Deuterostomia


show annotations for term's descendants           Sort by:
gastrulation with mouth forming second term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1 activin A receptor type 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17117439) Ensembl
MGI		 PMID:17117439 GO_REF:0000107 NCBI chr 2:157,736,446...157,876,330
Ensembl chr 2:157,736,251...157,876,330 		JBrowse link
G ACVR2A activin A receptor type 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10452853) Ensembl
MGI		 PMID:10452853 GO_REF:0000107 NCBI chr 2:147,844,517...147,930,822
Ensembl chr 2:147,844,517...147,930,826 		JBrowse link
G ACVR2B activin A receptor type 2B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10452853) Ensembl
MGI		 PMID:10452853 GO_REF:0000107 NCBI chr 3:38,453,890...38,493,142
Ensembl chr 3:38,453,890...38,493,142 		JBrowse link
G AMOT angiomotin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12676095) Ensembl
MGI		 PMID:12676095 GO_REF:0000107 NCBI chr  X:112,774,877...112,840,831
Ensembl chr  X:112,774,503...112,840,831 		JBrowse link
G CHRD chordin acts_upstream_of_or_within ISO (PMID:12810603) MGI PMID:12810603 NCBI chr 3:184,380,054...184,390,739
Ensembl chr 3:184,380,054...184,390,736 		JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8582267) Ensembl
MGI		 PMID:8582267 GO_REF:0000107 NCBI chr 3:41,199,505...41,240,443
Ensembl chr 3:41,194,741...41,260,096 		JBrowse link
G DACT1 dishevelled binding antagonist of beta catenin 1 acts_upstream_of_or_within ISO (PMID:19701191) MGI PMID:19701191 NCBI chr14:58,634,061...58,648,321
Ensembl chr14:58,633,967...58,648,321 		JBrowse link
G FRS2 fibroblast growth factor receptor substrate 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15870281) Ensembl
MGI		 PMID:15870281 GO_REF:0000107 NCBI chr12:69,470,388...69,579,793
Ensembl chr12:69,470,349...69,579,793 		JBrowse link
G GATA4 GATA binding protein 4 acts_upstream_of_or_within ISO (PMID:9136933) MGI PMID:9136933 NCBI chr 8:11,676,935...11,760,002
Ensembl chr 8:11,676,959...11,760,002 		JBrowse link
G LDB1 LIM domain binding 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12490556) Ensembl
MGI		 PMID:12490556 GO_REF:0000107 NCBI chr10:102,102,088...102,121,442
Ensembl chr10:102,106,489...102,120,368 		JBrowse link
G LHX1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:15355796) UniProt
MGI
Ensembl		 PMID:15355796 GO_REF:0000024 GO_REF:0000107 NCBI chr17:36,936,785...36,944,612
Ensembl chr17:36,936,785...36,944,612 		JBrowse link
G LRP5 LDL receptor related protein 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15142971) Ensembl
MGI
TreeGrafter		 PMID:15142971 GO_REF:0000107 GO_REF:0000118 NCBI chr11:68,298,412...68,449,275
Ensembl chr11:68,312,591...68,449,275 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:15142971) MGI PMID:15142971 NCBI chr12:12,116,025...12,267,044
Ensembl chr12:12,116,025...12,267,044 		JBrowse link
G NAT8 N-acetyltransferase 8 (putative) involved_in ISO (MGI:2135831|PMID:11397015) UniProt PMID:11397015 MGI:2135831 NCBI chr 2:73,640,723...73,642,422
Ensembl chr 2:73,640,723...73,642,422 		JBrowse link
G NAT8B N-acetyltransferase 8B (putative, gene/pseudogene) involved_in NAS (PMID:11397015) UniProt PMID:11397015 NCBI chr 2:73,700,509...73,702,125
Ensembl chr 2:73,700,576...73,701,340 		JBrowse link
G NODAL nodal growth differentiation factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14607953) Ensembl
MGI		 PMID:14607953 GO_REF:0000107 NCBI chr10:70,431,936...70,447,951
Ensembl chr10:70,431,936...70,447,951 		JBrowse link
G NSD1 nuclear receptor binding SET domain protein 1 acts_upstream_of_or_within ISO (PMID:12805229) MGI PMID:12805229 NCBI chr 5:177,131,798...177,300,213
Ensembl chr 5:177,131,830...177,300,213 		JBrowse link
G PLPP3 phospholipid phosphatase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12925589) Ensembl
MGI		 PMID:12925589 GO_REF:0000107 NCBI chr 1:56,494,761...56,579,563
Ensembl chr 1:56,494,761...56,645,301 		JBrowse link
G RNF2 ring finger protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12589020) Ensembl
MGI		 PMID:12589020 GO_REF:0000107 NCBI chr 1:185,045,558...185,102,603
Ensembl chr 1:185,045,497...185,102,603 		JBrowse link
G SMAD4 SMAD family member 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15215210) Ensembl
MGI		 PMID:15215210 GO_REF:0000107 NCBI chr18:51,030,213...51,085,042
Ensembl chr18:51,028,528...51,085,045 		JBrowse link
G TENM4 teneurin transmembrane protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15489520) Ensembl
MGI		 PMID:15489520 GO_REF:0000107 NCBI chr11:78,652,829...79,441,030
Ensembl chr11:78,652,829...79,441,030 		JBrowse link
G UGDH UDP-glucose 6-dehydrogenase involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:15755804) UniProt
MGI
Ensembl		 PMID:15755804 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:39,498,755...39,527,439
Ensembl chr 4:39,498,755...39,528,311 		JBrowse link
G ZBTB17 zinc finger and BTB domain containing 17 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14560010) Ensembl
MGI		 PMID:14560010 GO_REF:0000107 NCBI chr 1:15,941,869...15,976,101
Ensembl chr 1:15,941,869...15,976,132 		JBrowse link
epiboly involved in gastrulation with mouth forming second term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MEGF8 multiple EGF like domains 8 involved_in IMP (PMID:23063620) UniProt PMID:23063620 NCBI chr19:42,325,635...42,378,765
Ensembl chr19:42,325,609...42,378,769 		JBrowse link
ingression involved in gastrulation with mouth forming second term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRB2 crumbs cell polarity complex component 2 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:123,354,065...123,380,326
Ensembl chr 9:123,356,170...123,380,324 		JBrowse link
primitive streak formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ETS2 ETS proto-oncogene 2, transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23552073) Ensembl
MGI		 PMID:23552073 GO_REF:0000107 NCBI chr21:38,805,183...38,824,955
Ensembl chr21:38,805,183...38,824,955 		JBrowse link
G FOXA2 forkhead box A2 involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:11291865) UniProt
MGI		 PMID:11291865 GO_REF:0000024 NCBI chr20:22,580,998...22,585,490
Ensembl chr20:22,580,998...22,585,455 		JBrowse link
G GDF3 growth differentiation factor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16368929) Ensembl
MGI		 PMID:16368929 GO_REF:0000107 NCBI chr12:7,689,784...7,695,775
Ensembl chr12:7,689,784...7,695,775 		JBrowse link
G HHEX hematopoietically expressed homeobox acts_upstream_of_or_within ISO (PMID:21445260) MGI PMID:21445260 NCBI chr10:92,689,955...92,695,647
Ensembl chr10:92,689,955...92,695,647 		JBrowse link
G LHX1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:11291865) UniProt
MGI
Ensembl		 PMID:11291865 GO_REF:0000024 GO_REF:0000107 NCBI chr17:36,936,785...36,944,612
Ensembl chr17:36,936,785...36,944,612 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:19795512) MGI PMID:19795512 NCBI chr12:12,116,025...12,267,044
Ensembl chr12:12,116,025...12,267,044 		JBrowse link
G NODAL nodal growth differentiation factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21445260) Ensembl
MGI		 PMID:21445260 GO_REF:0000107 NCBI chr10:70,431,936...70,447,951
Ensembl chr10:70,431,936...70,447,951 		JBrowse link
G OTX2 orthodenticle homeobox 2 involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:11291865) UniProt
MGI		 PMID:11291865 GO_REF:0000024 NCBI chr14:56,799,905...56,810,479
Ensembl chr14:56,799,905...56,816,693 		JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:42,456,757...42,589,746
Ensembl chr12:42,456,757...42,590,355 		JBrowse link
G SRF serum response factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9799237) Ensembl
MGI		 PMID:9799237 GO_REF:0000107 NCBI chr 6:43,171,269...43,181,506
Ensembl chr 6:43,171,269...43,181,506 		JBrowse link
G TBXT T-box transcription factor T involved_in NAS (PMID:18593560) BHF-UCL PMID:18593560 NCBI chr 6:166,157,656...166,168,655
Ensembl chr 6:166,157,656...166,168,700 		JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19795512) Ensembl
MGI		 PMID:19795512 GO_REF:0000107 NCBI chr 3:55,465,715...55,505,263
Ensembl chr 3:55,465,715...55,490,539 		JBrowse link
G ZIC3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:137,566,127...137,577,691
Ensembl chr  X:137,566,127...137,577,691 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19612
    developmental process 7605
      anatomical structure morphogenesis 3194
        embryonic morphogenesis 724
          gastrulation 226
            gastrulation with mouth forming second 35
              delamination involved in gastrulation with mouth forming second 0
              epiboly involved in gastrulation with mouth forming second + 1
              ingression involved in gastrulation with mouth forming second 1
              invagination involved in gastrulation with mouth forming second 0
              involution involved in gastrulation with mouth forming second 0
              primitive streak formation 13
Path 2
Term Annotations click to browse term
  biological_process 19612
    developmental process 7605
      anatomical structure development 7016
        multicellular organism development 5629
          embryo development 1396
            embryonic morphogenesis 724
              gastrulation 226
                gastrulation with mouth forming second 35
                  delamination involved in gastrulation with mouth forming second 0
                  epiboly involved in gastrulation with mouth forming second + 1
                  ingression involved in gastrulation with mouth forming second 1
                  invagination involved in gastrulation with mouth forming second 0
                  involution involved in gastrulation with mouth forming second 0
                  primitive streak formation 13
paths to the root