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ONTOLOGY REPORT - ANNOTATIONS

Term:synaptic membrane adhesion
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Accession:GO:0099560 term browser browse the term
Definition:The attachment of presynaptic membrane to postsynaptic membrane via adhesion molecules that are at least partially embedded in the plasma membrane.
Synonyms:exact_synonym: synapse adhesion between pre- and post-synapse


show annotations for term's descendants           Sort by:
synaptic membrane adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cadm1 cell adhesion molecule 1 involved_in IEP
IDA		 (PMID:18003830) SynGO PMID:18003830 NCBI chr 9:47,441,468...47,773,578
Ensembl chr 9:47,441,471...47,769,413 		JBrowse link
G Cadm2 cell adhesion molecule 2 involved_in ISO PMID:18003830 SynGO PMID:18003830 RGD:2289094 NCBI chr16:66,452,302...67,417,825
Ensembl chr16:66,452,307...67,417,796 		JBrowse link
G Cadm3 cell adhesion molecule 3 involved_in ISO PMID:18003830 SynGO PMID:18003830 RGD:2289094 NCBI chr 1:173,161,825...173,195,214
Ensembl chr 1:173,160,825...173,195,261 		JBrowse link
G Cadm4 cell adhesion molecule 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:24,181,448...24,203,958
Ensembl chr 7:24,181,448...24,203,964 		JBrowse link
G Cdh10 cadherin 10 involved_in IDA
IBA
IMP		 (PMID:28957665) SynGO
GO_Central		 PMID:28957665 GO_REF:0000033 NCBI chr15:18,818,763...19,014,883
Ensembl chr15:18,819,033...19,014,322 		JBrowse link
G Cdh6 cadherin 6 involved_in IDA
IBA
IMP		 (PMID:28957665) SynGO
GO_Central		 PMID:28957665 GO_REF:0000033 NCBI chr15:13,028,785...13,176,493
Ensembl chr15:13,028,787...13,173,761 		JBrowse link
G Cdh9 cadherin 9 involved_in IMP
IBA
ISO
IDA		 (PMID:21867881), (PMID:28957665) SynGO
GO_Central		 PMID:21867881 PMID:28957665 GO_REF:0000033 GO_REF:0000096 NCBI chr15:16,728,641...16,857,224
Ensembl chr15:16,728,842...16,857,180 		JBrowse link
G Efna5 ephrin A5 involved_in IDA
IMP
IEP		 (PMID:22275477) SynGO PMID:22275477 NCBI chr17:62,909,949...63,188,431
Ensembl chr17:62,911,179...63,188,312 		JBrowse link
G Elfn1 leucine rich repeat and fibronectin type III, extracellular 1 involved_in IEP
IMP
IDA		 (PMID:25047565) SynGO PMID:25047565 NCBI chr 5:139,893,346...139,960,480
Ensembl chr 5:139,893,698...139,960,477 		JBrowse link
G Elfn2 leucine rich repeat and fibronectin type III, extracellular 2 involved_in IDA
IMP		 (PMID:31485013) SynGO PMID:31485013 NCBI chr15:78,551,531...78,603,056
Ensembl chr15:78,551,531...78,602,971 		JBrowse link
G Epha3 Eph receptor A3 involved_in IMP
IDA		 (PMID:22275477) SynGO PMID:22275477 NCBI chr16:63,363,895...63,684,538
Ensembl chr16:63,363,897...63,684,538 		JBrowse link
G Flrt3 fibronectin leucine rich transmembrane protein 3 involved_in IDA
IMP		 (PMID:22405201) SynGO PMID:22405201 NCBI chr 2:140,500,118...140,513,396
Ensembl chr 2:140,492,834...140,513,389 		JBrowse link
G Gpc4 glypican 4 involved_in IBA
IMP
IDA		 (PMID:23911103) GO_Central
SynGO		 PMID:23911103 GO_REF:0000033 NCBI chr  X:51,139,884...51,253,800
Ensembl chr  X:51,141,898...51,254,129 		JBrowse link
G Igsf9b immunoglobulin superfamily, member 9B involved_in IDA
IMP		 (PMID:23751499) SynGO PMID:23751499 NCBI chr 9:27,210,400...27,268,845
Ensembl chr 9:27,210,500...27,268,842 		JBrowse link
G Il1rap interleukin 1 receptor accessory protein involved_in IMP
IDA		 (PMID:22357843) SynGO PMID:22357843 NCBI chr16:26,400,259...26,548,878
Ensembl chr16:26,400,454...26,548,867 		JBrowse link
G Il1rapl1 interleukin 1 receptor accessory protein-like 1 involved_in IDA (PMID:21940441) BHF-UCL PMID:21940441 NCBI chr  X:85,784,543...87,159,554
Ensembl chr  X:85,784,476...87,159,251 		JBrowse link
G Itga3 integrin alpha 3 involved_in IDA
IMP		 (PMID:28386022) SynGO PMID:28386022 NCBI chr11:94,935,301...94,967,637
Ensembl chr11:94,935,300...94,967,627 		JBrowse link
G Lrfn3 leucine rich repeat and fibronectin type III domain containing 3 involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000096 GO_REF:0000107 NCBI chr 7:30,054,939...30,062,197
Ensembl chr 7:30,054,914...30,062,197 		JBrowse link
G Lrfn4 leucine rich repeat and fibronectin type III domain containing 4 involved_in IMP
IDA
IBA		 (PMID:20410109) SynGO
GO_Central		 PMID:20410109 GO_REF:0000033 NCBI chr19:4,661,817...4,665,720
Ensembl chr19:4,661,813...4,665,695 		JBrowse link
G Lrfn5 leucine rich repeat and fibronectin type III domain containing 5 involved_in IBA
ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000096 GO_REF:0000107 NCBI chr12:61,569,356...61,913,554
Ensembl chr12:61,569,936...61,905,128 		JBrowse link
G Lrrc4 leucine rich repeat containing 4 involved_in IBA
ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000096 GO_REF:0000107 NCBI chr 6:28,828,125...28,831,746
Ensembl chr 6:28,661,830...28,831,746 		JBrowse link
G Lrrc4b leucine rich repeat containing 4B involved_in IBA
IEA
ISO		 GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000096 GO_REF:0000107 NCBI chr 7:44,091,911...44,112,775
Ensembl chr 7:44,078,442...44,112,775 		JBrowse link
G Lrrc4c leucine rich repeat containing 4C involved_in IEP
IBA
ISO
IDA
IMP		 (PMID:25411505) SynGO
GO_Central		 PMID:25411505 GO_REF:0000033 GO_REF:0000119 NCBI chr 2:96,148,514...97,466,871
Ensembl chr 2:96,148,514...97,462,011 		JBrowse link
G Nlgn1 neuroligin 1 involved_in IDA
IMP		 (PMID:12796785)
(PMID:12796785), (PMID:26771491)		 SynGO
SynGO-UCL		 PMID:12796785 PMID:26771491 NCBI chr 3:25,475,972...26,387,504
Ensembl chr 3:25,480,379...26,386,609 		JBrowse link
G Nrg1 neuregulin 1 involved_in IDA
EXP
IMP		 (PMID:10686589) SynGO PMID:10686589 NCBI chr 8:32,299,493...33,381,858
Ensembl chr 8:32,304,579...33,374,825
Ensembl chr 8:32,304,579...33,374,825 		JBrowse link
G Nrxn1 neurexin I involved_in IDA
IMP		 (PMID:12796785)
(PMID:12796785), (PMID:26771491)		 SynGO
SynGO-UCL		 PMID:12796785 PMID:26771491 NCBI chr17:90,341,072...91,400,587
Ensembl chr17:90,341,059...91,400,499 		JBrowse link
G Ntng1 netrin G1 involved_in IEP
ISO
IMP
IDA		 (PMID:25411505) SynGO
GO_Central		 PMID:25411505 GO_REF:0000119 NCBI chr 3:109,687,366...110,057,291
Ensembl chr 3:109,687,356...110,051,327 		JBrowse link
G Ntng2 netrin G2 involved_in IDA
IMP		 (PMID:16980967) SynGO PMID:16980967 NCBI chr 2:29,084,738...29,138,111
Ensembl chr 2:29,084,553...29,143,017 		JBrowse link
G Pcdh17 protocadherin 17 involved_in IMP
IDA		 (PMID:23684785) SynGO PMID:23684785 NCBI chr14:84,680,626...84,775,005
Ensembl chr14:84,681,003...84,776,442 		JBrowse link
G Ptprd protein tyrosine phosphatase receptor type D involved_in ISO
IBA
IDA		 (PMID:21940441) GO_Central
BHF-UCL		 PMID:21940441 GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 NCBI chr 4:75,859,474...78,132,282
Ensembl chr 4:75,859,475...78,130,198 		JBrowse link
G Ptprf protein tyrosine phosphatase receptor type F involved_in IEA
IBA
ISO		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000096 GO_REF:0000107 GO_REF:0000119 NCBI chr 4:118,065,410...118,148,602
Ensembl chr 4:118,065,410...118,148,602 		JBrowse link
G Ptprs protein tyrosine phosphatase receptor type S involved_in IEA
IBA
ISO		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000096 GO_REF:0000107 GO_REF:0000119 NCBI chr17:56,719,426...56,783,480
Ensembl chr17:56,719,426...56,783,483 		JBrowse link
G Slitrk1 SLIT and NTRK-like family, member 1 involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr14:109,147,420...109,151,671
Ensembl chr14:109,146,232...109,151,590 		JBrowse link
G Slitrk2 SLIT and NTRK-like family, member 2 involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr  X:65,692,535...65,705,008
Ensembl chr  X:65,692,924...65,704,999 		JBrowse link
G Slitrk3 SLIT and NTRK-like family, member 3 involved_in IEA
ISO		 Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr 3:72,954,399...72,965,298
Ensembl chr 3:72,954,598...72,965,136 		JBrowse link
G Slitrk5 SLIT and NTRK-like family, member 5 involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr14:111,912,547...111,920,576
Ensembl chr14:111,912,529...111,920,573 		JBrowse link
G Sparcl1 SPARC-like 1 involved_in IMP
IDA		 (PMID:26771491) SynGO PMID:26771491 NCBI chr 5:104,226,974...104,261,954
Ensembl chr 5:104,226,977...104,261,599 		JBrowse link
G Tenm3 teneurin transmembrane protein 3 involved_in IDA (PMID:35484136) SynGO PMID:35484136 NCBI chr 8:48,678,700...51,370,255
Ensembl chr 8:48,680,717...49,296,986 		JBrowse link
G Tenm4 teneurin transmembrane protein 4 involved_in NAS
IDA		 (PMID:35484136) SynGO PMID:35484136 NCBI chr 7:95,550,262...96,560,300
Ensembl chr 7:95,820,453...96,560,300 		JBrowse link
regulation of synaptic membrane adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrfn3 leucine rich repeat and fibronectin type III domain containing 3 involved_in IEA
ISO		 Ensembl
GO_Central		 GO_REF:0000096 GO_REF:0000107 NCBI chr 7:30,054,939...30,062,197
Ensembl chr 7:30,054,914...30,062,197 		JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in ISO GO_Central GO_REF:0000096 NCBI chr 5:19,431,787...20,909,790
Ensembl chr 5:19,432,034...20,909,790 		JBrowse link
G Mapk14 mitogen-activated protein kinase 14 involved_in IMP
IEP
EXP
IDA		 (PMID:17988630) SynGO PMID:17988630 NCBI chr17:28,910,316...28,967,379
Ensembl chr17:28,910,303...28,967,380 		JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr17:30,046,930...30,107,557
Ensembl chr17:30,046,923...30,189,061 		JBrowse link
G Mdga2 MAM domain containing glycosylphosphatidylinositol anchor 2 involved_in IDA
IMP		 (PMID:27608760) SynGO PMID:27608760 NCBI chr12:66,512,832...67,269,323
Ensembl chr12:66,512,834...67,269,323 		JBrowse link
G Pcdh8 protocadherin 8 involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000096 GO_REF:0000107 NCBI chr14:80,004,224...80,008,752
Ensembl chr14:80,004,215...80,008,752 		JBrowse link
G Taok2 TAO kinase 2 involved_in ISO GO_Central GO_REF:0000096 NCBI chr 7:126,464,848...126,485,468
Ensembl chr 7:126,464,850...126,483,875 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28635
    cellular process 18392
      cell adhesion 1573
        cell-cell adhesion 970
          cell-cell adhesion via plasma-membrane adhesion molecules 237
            synaptic membrane adhesion 45
              regulation of synaptic membrane adhesion 7
Path 2
Term Annotations click to browse term
  biological_process 28635
    cellular process 18392
      cellular component organization or biogenesis 7407
        cellular component organization 7211
          cell junction organization 987
            synapse organization 699
              synaptic membrane adhesion 45
                regulation of synaptic membrane adhesion 7
paths to the root