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ONTOLOGY REPORT - ANNOTATIONS

Term:ureter development
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Accession:GO:0072189 term browser browse the term
Definition:The process whose specific outcome is the progression of the ureter over time, from its formation to the mature structure. The ureter is a muscular tube that transports urine from the kidney to the urinary bladder or from the Malpighian tubule to the hindgut.


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ureter development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxf1 forkhead box F1 involved_in ISO (PMID:19500772) RGD PMID:19500772 NCBI chr19:49,153,949...49,157,741
Ensembl chr19:49,153,699...49,157,738 		JBrowse link
G Nfia nuclear factor I/A involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2449024 (PMID:17530927)		 Ensembl
RGD		 PMID:17530927 GO_REF:0000107 NCBI chr 5:112,436,655...112,781,878
Ensembl chr 5:112,436,644...112,775,885 		JBrowse link
G Nphp3 nephrocystin 3 involved_in ISO (PMID:18371931) RGD PMID:18371931 NCBI chr 8:104,621,908...104,662,383
Ensembl chr 8:104,621,864...104,662,383 		JBrowse link
G Pax2 paired box 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3833510|PMID:17881463)		 UniProt
RGD		 PMID:17881463 GO_REF:0000024 MGI:3833510 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
G Sox17 SRY-box transcription factor 17 involved_in ISO (PMID:20960469) RGD PMID:20960469 NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228 		JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO MGI:1923615 (PMID:20881014) RGD PMID:20881014 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994 		JBrowse link
G Tbx18 T-box transcription factor 18 involved_in
acts_upstream_of_or_within		 ISO (PMID:26235987)
MGI:98371 (PMID:20881014)		 RGD PMID:20881014 PMID:26235987 NCBI chr 8:88,652,054...88,680,081
Ensembl chr 8:88,652,054...88,680,058 		JBrowse link
mesenchymal cell proliferation involved in ureter development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Six1 SIX homeobox 1 acts_upstream_of ISO MGI:1923615 (PMID:20110314) RGD PMID:20110314 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975 		JBrowse link
G Tbx18 T-box transcription factor 18 acts_upstream_of ISO MGI:102780 (PMID:20110314) RGD PMID:20110314 NCBI chr 8:88,652,054...88,680,081
Ensembl chr 8:88,652,054...88,680,058 		JBrowse link
negative regulation of mesenchymal cell proliferation involved in ureter development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in ISO
ISS
IEA		 (PMID:12399320)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:12399320 GO_REF:0000024 GO_REF:0000107 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
negative regulation of ureter smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:2388350|PMID:12399320)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:12399320 GO_REF:0000024 GO_REF:0000107 MGI:2388350 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
positive regulation of mesenchymal cell proliferation involved in ureter development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:2388350|PMID:12399320)		 UniProt
Ensembl
RGD		 PMID:12399320 GO_REF:0000024 GO_REF:0000107 MGI:2388350 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Six1 SIX homeobox 1 acts_upstream_of_or_within ISO MGI:1923615 (PMID:20110314) RGD PMID:20110314 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975 		JBrowse link
G Tbx18 T-box transcription factor 18 acts_upstream_of_or_within ISO MGI:102780 (PMID:20110314) RGD PMID:20110314 NCBI chr 8:88,652,054...88,680,081
Ensembl chr 8:88,652,054...88,680,058 		JBrowse link
positive regulation of ureter smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:2388350|PMID:12399320)		 UniProt
Ensembl
RGD		 PMID:12399320 GO_REF:0000024 GO_REF:0000107 MGI:2388350 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
ureter maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 acts_upstream_of_or_within ISO MGI:1857891 (PMID:21521737) RGD PMID:21521737 NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107 		JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO MGI:3719568 (PMID:21521737) RGD PMID:21521737 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391 		JBrowse link
G Pax2 paired box 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3833510|PMID:17881463)		 UniProt
RGD		 PMID:17881463 GO_REF:0000024 MGI:3833510 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
G Ret ret proto-oncogene acts_upstream_of_or_within ISO MGI:2136894 (PMID:21521737) RGD PMID:21521737 NCBI chr 4:151,325,969...151,368,176
Ensembl chr 4:151,326,431...151,368,176 		JBrowse link
ureter morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IEA
ISO		 GO_REF:0000107
(MGI:3710018|PMID:17442697)		 Ensembl
RGD		 PMID:17442697 GO_REF:0000107 MGI:3710018 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within ISO MGI:95457|MGI:95663|MGI:97486|MGI:99783 (PMID:21731775) RGD PMID:21731775 NCBI chr 1:258,626,584...258,633,594
Ensembl chr 1:258,626,584...258,633,594 		JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO MGI:95388|MGI:95457|MGI:97486|MGI:99783 (PMID:21731775) RGD PMID:21731775 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391 		JBrowse link
G Lhx1 LIM homeobox 1 acts_upstream_of_or_within ISO MGI:95388|MGI:95457|MGI:95663|MGI:97486 (PMID:21731775) RGD PMID:21731775 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617 		JBrowse link
G Lzts2 leucine zipper tumor suppressor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:5302222 (PMID:21949185)		 Ensembl
RGD		 PMID:21949185 GO_REF:0000107 NCBI chr 1:243,876,665...243,888,489
Ensembl chr 1:243,880,022...243,888,423 		JBrowse link
G Mecom MDS1 and EVI1 complex locus acts_upstream_of_or_within ISO MGI:95388|MGI:95663|MGI:97486|MGI:99783 (PMID:21731775) RGD PMID:21731775 NCBI chr 2:112,909,353...113,464,583
Ensembl chr 2:112,909,321...113,464,590 		JBrowse link
G Pax2 paired box 2 involved_in
acts_upstream_of_or_within		 ISO (MGI:48612|PMID:1723950)
MGI:95388|MGI:95457|MGI:95663|MGI:99783 (PMID:21731775)		 RGD PMID:1723950 PMID:21731775 MGI:48612 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
G Sox8 SRY-box transcription factor 8 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:98371 (PMID:21212101)		 UniProt
RGD		 PMID:21212101 GO_REF:0000024 NCBI chr10:14,584,829...14,589,818
Ensembl chr10:14,584,829...14,589,818 		JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO MGI:98370 (PMID:21212101) RGD PMID:21212101 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994 		JBrowse link
ureter smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Six1 SIX homeobox 1 acts_upstream_of_or_within ISO MGI:2655195 (PMID:20110314) RGD PMID:20110314 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975 		JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO MGI:2176205|MGI:2385468 (PMID:20881014) RGD PMID:20881014 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994 		JBrowse link
G Tshz3 teashirt zinc finger homeobox 3 involved_in ISO (MGI:3806378|PMID:18776146) RGD PMID:18776146 MGI:3806378 NCBI chr 1:89,386,732...89,460,719
Ensembl chr 1:89,381,858...89,460,874 		JBrowse link
ureter urothelium development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3826342|PMID:18835385)		 UniProt
RGD		 PMID:18835385 GO_REF:0000024 MGI:3826342 NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817 		JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in ISO (MGI:5285125|PMID:21512138) RGD PMID:21512138 MGI:5285125 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19692
    multicellular organismal process 8810
      multicellular organism development 5239
        tube development 1341
          ureter development 20
            mesenchymal cell proliferation involved in ureter development + 4
            ureter maturation 4
            ureter morphogenesis + 9
            ureter smooth muscle development + 4
            ureter urothelium development + 2
Path 2
Term Annotations click to browse term
  biological_process 19692
    developmental process 6963
      anatomical structure development 6486
        multicellular organism development 5239
          system development 4526
            renal system development 420
              ureter development 20
                mesenchymal cell proliferation involved in ureter development + 4
                ureter maturation 4
                ureter morphogenesis + 9
                ureter smooth muscle development + 4
                ureter urothelium development + 2
paths to the root