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ONTOLOGY REPORT - ANNOTATIONS

Term:dendrite cytoplasm
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Accession:GO:0032839 term browser browse the term
Definition:All of the contents of a dendrite, excluding the surrounding plasma membrane.
Synonyms:exact_synonym: dendritic cytoplasm


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dendrite cytoplasm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd12 abhydrolase domain containing 12 located_in IDA (PMID:27307232) UniProt PMID:27307232 NCBI chr 2:150,674,413...150,746,705
Ensembl chr 2:150,674,413...150,746,661 		JBrowse link
G Abhd13 abhydrolase domain containing 13 located_in IDA (PMID:27307232) UniProt PMID:27307232 NCBI chr 8:10,027,717...10,042,155
Ensembl chr 8:10,027,707...10,042,155 		JBrowse link
G Ada adenosine deaminase located_in ISO RGD
GO_Central		 PMID:2253038 GO_REF:0000096 RGD:2291858 NCBI chr 2:163,565,703...163,592,154
Ensembl chr 2:163,568,504...163,592,159 		JBrowse link
G Camk2a calcium/calmodulin-dependent protein kinase II alpha located_in ISO GO_Central GO_REF:0000096 NCBI chr18:61,058,704...61,121,224
Ensembl chr18:61,058,690...61,121,224 		JBrowse link
G Canx calnexin located_in ISO RGD
GO_Central		 PMID:10461883 GO_REF:0000096 RGD:2313156 NCBI chr11:50,184,784...50,216,500
Ensembl chr11:50,184,788...50,216,500 		JBrowse link
G Cdkl5 cyclin dependent kinase like 5 is_active_in
located_in		 IBA
ISO		 GO_Central GO_REF:0000033 GO_REF:0000096 NCBI chr  X:159,567,241...159,777,673
Ensembl chr  X:159,554,919...159,777,700 		JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 located_in ISO
ISS		 GO_Central
BHF-UCL		 GO_REF:0000024 GO_REF:0000096 NCBI chr11:69,908,029...69,938,107
Ensembl chr11:69,907,768...69,938,348 		JBrowse link
G Flot2 flotillin 2 located_in IEA GOC GO_REF:0000108 NCBI chr11:77,928,757...77,951,260
Ensembl chr11:77,928,757...77,951,260 		JBrowse link
G Gabarapl1 GABA type A receptor associated protein like 1 located_in ISO RGD
GO_Central		 PMID:16650615 GO_REF:0000096 RGD:4890439 NCBI chr 6:129,510,155...129,519,294
Ensembl chr 6:129,510,123...129,519,309 		JBrowse link
G Gria2 glutamate receptor, ionotropic, AMPA2 (alpha 2) located_in ISO RGD
GO_Central		 PMID:17207780 GO_REF:0000096 RGD:1642304 NCBI chr 3:80,588,757...80,711,534
Ensembl chr 3:80,588,757...80,710,142 		JBrowse link
G Grik2 glutamate receptor, ionotropic, kainate 2 (beta 2) located_in ISO
IEA		 RGD
GO_Central
Ensembl		 PMID:15844209 GO_REF:0000096 GO_REF:0000107 RGD:1642495 NCBI chr10:48,969,776...49,666,523
Ensembl chr10:48,970,929...49,664,862 		JBrowse link
G Grik3 glutamate receptor, ionotropic, kainate 3 located_in ISO RGD
GO_Central		 PMID:15844209 GO_REF:0000096 RGD:1642495 NCBI chr 4:125,384,025...125,607,966
Ensembl chr 4:125,384,493...125,607,966 		JBrowse link
G Hip1r huntingtin interacting protein 1 related located_in ISS (PMID:12650982) ParkinsonsUK-UCL PMID:12650982 NCBI chr 5:124,111,665...124,141,263
Ensembl chr 5:124,111,691...124,143,621 		JBrowse link
G Hpca hippocalcin located_in ISO
IEA		 RGD
Ensembl
GO_Central		 PMID:8233019 GO_REF:0000096 GO_REF:0000107 RGD:9686436 NCBI chr 4:129,005,363...129,019,712
Ensembl chr 4:129,005,363...129,015,829 		JBrowse link
G Kcnab1 potassium voltage-gated channel, shaker-related subfamily, beta member 1 located_in ISO RGD
GO_Central		 PMID:8756417 GO_REF:0000096 RGD:9743934 NCBI chr 3:64,856,636...65,285,643
Ensembl chr 3:64,856,617...65,285,644 		JBrowse link
G Kif17 kinesin family member 17 located_in IEA GOC GO_REF:0000108 NCBI chr 4:137,989,562...138,029,284
Ensembl chr 4:137,977,746...138,029,278 		JBrowse link
G Kif21b kinesin family member 21B located_in IEA GOC GO_REF:0000108 NCBI chr 1:136,059,128...136,105,739
Ensembl chr 1:136,059,127...136,105,736 		JBrowse link
G Kif3a kinesin family member 3A located_in IEA GOC GO_REF:0000108 NCBI chr11:53,456,531...53,495,075
Ensembl chr11:53,458,206...53,492,794 		JBrowse link
G Kif3b kinesin family member 3B located_in IEA GOC GO_REF:0000108 NCBI chr 2:153,132,028...153,175,310
Ensembl chr 2:153,133,333...153,175,310 		JBrowse link
G Kif5a kinesin family member 5A located_in IEA GOC GO_REF:0000108 NCBI chr10:127,061,564...127,102,217
Ensembl chr10:127,061,565...127,099,217 		JBrowse link
G Kif5c kinesin family member 5C located_in IEA GOC GO_REF:0000108 NCBI chr 2:49,509,298...49,664,790
Ensembl chr 2:49,509,310...49,664,790 		JBrowse link
G Kifap3 kinesin-associated protein 3 located_in IEA GOC GO_REF:0000108 NCBI chr 1:163,589,711...163,744,676
Ensembl chr 1:163,607,152...163,744,678 		JBrowse link
G Klhl17 kelch-like 17 located_in ISO
IEA		 RGD
GO_Central
Ensembl		 PMID:12063253 GO_REF:0000096 GO_REF:0000107 RGD:625502 NCBI chr 4:156,313,501...156,319,314
Ensembl chr 4:156,313,792...156,319,314 		JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 located_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr15:91,556,994...91,700,327
Ensembl chr15:91,557,378...91,700,323 		JBrowse link
G Map2 microtubule-associated protein 2 located_in ISO GO_Central GO_REF:0000096 NCBI chr 1:66,214,337...66,481,742
Ensembl chr 1:66,214,432...66,481,742 		JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 located_in ISO RGD
GO_Central		 PMID:9714150 GO_REF:0000096 RGD:2293331 NCBI chr 9:64,093,066...64,160,887
Ensembl chr 9:64,093,052...64,160,913 		JBrowse link
G Map2k4 mitogen-activated protein kinase kinase 4 located_in ISO
IEA		 RGD
Ensembl
GO_Central		 PMID:9714150 GO_REF:0000096 GO_REF:0000107 RGD:2293331 NCBI chr11:65,579,070...65,679,185
Ensembl chr11:65,579,069...65,679,123 		JBrowse link
G Mapk1 mitogen-activated protein kinase 1 located_in ISO RGD
GO_Central		 PMID:9714150 GO_REF:0000096 RGD:2293331 NCBI chr16:16,801,246...16,865,317
Ensembl chr16:16,801,246...16,865,317 		JBrowse link
G Mapk8 mitogen-activated protein kinase 8 located_in ISO RGD
GO_Central		 PMID:9714150 GO_REF:0000096 RGD:2293331 NCBI chr14:33,099,855...33,169,213
Ensembl chr14:33,099,855...33,169,115 		JBrowse link
G Oprm1 opioid receptor, mu 1 located_in ISO RGD
GO_Central		 PMID:16194531 GO_REF:0000096 RGD:2316627 NCBI chr10:6,708,593...6,988,209
Ensembl chr10:6,708,506...6,988,198 		JBrowse link
G Rab17 RAB17, member RAS oncogene family located_in IEA GOC GO_REF:0000108 NCBI chr 1:90,885,855...90,897,395
Ensembl chr 1:90,885,855...90,897,383 		JBrowse link
G Sod1 superoxide dismutase 1, soluble located_in ISO
ISS		 GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000119 NCBI chr16:90,017,650...90,023,221
Ensembl chr16:90,017,642...90,023,217 		JBrowse link
G Stau2 staufen double-stranded RNA binding protein 2 located_in IEA GOC GO_REF:0000108 NCBI chr 1:16,299,027...16,591,228
Ensembl chr 1:16,298,898...16,590,336 		JBrowse link
G Uhmk1 U2AF homology motif (UHM) kinase 1 located_in IDA (PMID:19015237) BHF-UCL PMID:19015237 NCBI chr 1:170,020,989...170,043,466
Ensembl chr 1:170,020,989...170,042,966 		JBrowse link
G Wls wntless WNT ligand secretion mediator located_in ISO
IEA		 RGD
Ensembl
GO_Central		 PMID:22001156 GO_REF:0000096 GO_REF:0000107 RGD:7488965 NCBI chr 3:159,545,287...159,644,302
Ensembl chr 3:159,545,309...159,644,300 		JBrowse link
G Zc3h14 zinc finger CCCH type containing 14 located_in IEA
ISO		 Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr12:98,708,276...98,754,033
Ensembl chr12:98,713,223...98,754,012 		JBrowse link
dendritic spine cytoplasm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Baiap2 brain-specific angiogenesis inhibitor 1-associated protein 2 located_in ISO
IEA		 RGD
Ensembl
GO_Central		 PMID:15673667 GO_REF:0000096 GO_REF:0000107 RGD:9684988 NCBI chr11:119,833,762...119,897,608
Ensembl chr11:119,833,589...119,897,608 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 28566
    cellular anatomical structure 19592
      somatodendritic compartment 1226
        dendritic tree 873
          dendrite 871
            dendrite cytoplasm 37
              dendritic spine cytoplasm 1
Path 2
Term Annotations click to browse term
  cellular_component 28566
    cellular anatomical structure 19592
      intracellular anatomical structure 14874
        cytoplasm 12045
          cytoplasmic region 352
            plasma membrane bounded cell projection cytoplasm 310
              neuron projection cytoplasm 101
                dendrite cytoplasm 37
                  dendritic spine cytoplasm 1
paths to the root