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ONTOLOGY REPORT - ANNOTATIONS


Term:plasma membrane bounded cell projection cytoplasm
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Accession:GO:0032838 term browser browse the term
Definition:All of the contents of a plasma membrane bounded cell projection, excluding the plasma membrane surrounding the projection.


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plasma membrane bounded cell projection cytoplasm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1b1 aldo-keto reductase family 1 member B IDA RGD PMID:8150024 RGD:8548684 NCBI chr 4:61,706,866...61,720,959
Ensembl chr 4:61,706,864...61,720,956
JBrowse link
G Cntf ciliary neurotrophic factor IDA processes of nerve-ensheathing cells of the olfactory bulb RGD PMID:12849744 RGD:1358521 NCBI chr 1:229,599,009...229,601,032
Ensembl chr 1:229,599,009...229,601,032
JBrowse link
G Ranbp1 RAN binding protein 1 IDA RGD PMID:18667152 RGD:9835000 NCBI chr11:86,890,585...86,898,818
Ensembl chr11:86,890,585...86,898,818
JBrowse link
A axonemal microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfap206 cilia and flagella associated protein 206 colocalizes_with ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:50,148,685...50,193,580
Ensembl chr 5:50,148,658...50,193,571
JBrowse link
axon cytoplasm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr10 actin related protein 10 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:93,385,457...93,411,605
Ensembl chr 6:93,385,457...93,411,576
JBrowse link
G Agbl4 AGBL carboxypeptidase 4 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:130,742,297...131,656,581
Ensembl chr 5:131,380,297...131,455,211
Ensembl chr 5:131,380,297...131,455,211
JBrowse link
G Agtpbp1 ATP/GTP binding carboxypeptidase 1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr17:5,510,009...5,614,416
Ensembl chr17:5,511,385...5,614,435
JBrowse link
G Ap3b1 adaptor related protein complex 3 subunit beta 1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:24,022,815...24,227,522
Ensembl chr 2:24,024,791...24,226,224
JBrowse link
G Ap3b2 adaptor related protein complex 3 subunit beta 2 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:143,284,041...143,315,846
Ensembl chr 1:143,283,996...143,315,633
JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:11,838,639...11,873,992
Ensembl chr 7:11,838,639...11,873,984
JBrowse link
G Ap3m1 adaptor related protein complex 3 subunit mu 1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:3,435,998...3,454,281
Ensembl chr15:3,436,361...3,454,279
JBrowse link
G Ap3m2 adaptor related protein complex 3 subunit mu 2 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr16:74,075,842...74,091,230
Ensembl chr16:74,076,812...74,091,139
JBrowse link
G Ap3s1 adaptor related protein complex 3 subunit sigma 1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr18:40,732,472...40,798,064
Ensembl chr18:40,732,480...40,797,761
JBrowse link
G Ap3s2 adaptor related protein complex 3 subunit sigma 2 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:141,612,961...141,655,417
Ensembl chr 1:141,612,963...141,655,894
JBrowse link
G Arl8a ADP-ribosylation factor like GTPase 8A located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:51,972,974...51,981,976
Ensembl chr13:51,972,974...51,981,976
JBrowse link
G Arl8b ADP-ribosylation factor like GTPase 8B located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:140,837,745...140,881,866
Ensembl chr 4:140,837,745...140,881,865
JBrowse link
G Armcx3 armadillo repeat containing, X-linked 3 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:105,573,909...105,577,480
Ensembl chr  X:105,573,909...105,580,562
JBrowse link
G Bloc1s1 biogenesis of lysosomal organelles complex-1, subunit 1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:3,342,630...3,346,238
Ensembl chr 7:3,342,630...3,346,238
JBrowse link
G Bloc1s2 biogenesis of lysosomal organelles complex-1, subunit 2 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:263,913,901...263,920,989
Ensembl chr 1:263,913,854...263,920,962
JBrowse link
G Bloc1s3 biogenesis of lysosomal organelles complex-1, subunit 3 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:80,414,766...80,417,385
Ensembl chr 1:80,415,686...80,416,273
JBrowse link
G Bloc1s4 biogenesis of lysosomal organelles complex 1 subunit 4 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr14:79,013,808...79,015,108
Ensembl chr14:79,013,807...79,015,112
JBrowse link
G Bloc1s5 biogenesis of lysosomal organelles complex 1 subunit 5 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr17:26,808,193...26,833,257
Ensembl chr17:26,808,330...26,833,247
JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:114,869,478...114,880,218
Ensembl chr 3:114,869,459...114,881,590
JBrowse link
G Bsn bassoon (presynaptic cytomatrix protein) located_in IDA PMID:19380881 SynGO-UCL PMID:19380881 RGD:12793047 NCBI chr 8:116,873,721...116,965,396
Ensembl chr 8:116,873,721...116,965,396
JBrowse link
G Cacna1c calcium voltage-gated channel subunit alpha1 C ISO RGD RGD:11556226 NCBI chr 4:150,635,808...151,270,790
Ensembl chr 4:150,641,066...150,829,913
JBrowse link
G Caly calcyon neuron-specific vesicular protein located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:212,537,851...212,549,040
Ensembl chr 1:212,537,848...212,549,477
JBrowse link
G Dlg2 discs large MAGUK scaffold protein 2 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:154,916,274...157,274,077
Ensembl chr 1:156,552,328...157,269,747
JBrowse link
G Dst dystonin located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:37,902,336...38,296,961
Ensembl chr 9:37,902,303...38,196,273
JBrowse link
G Dtnbp1 dystrobrevin binding protein 1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr17:20,090,136...20,182,332
Ensembl chr17:20,090,246...20,182,206
JBrowse link
G Dync1h1 dynein cytoplasmic 1 heavy chain 1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:134,958,854...135,085,769
Ensembl chr 6:134,958,854...135,085,769
JBrowse link
G Dync1i1 dynein cytoplasmic 1 intermediate chain 1 located_in IDA PMID:19380881 SynGO-UCL PMID:19380881 RGD:12793047 NCBI chr 4:30,807,755...31,121,097
Ensembl chr 4:30,807,879...31,121,090
JBrowse link
G Dynll1 dynein light chain LC8-type 1 IDA RGD PMID:19641106 RGD:13207432 NCBI chr12:47,074,200...47,076,573
Ensembl chr12:47,074,200...47,076,572
JBrowse link
G Dynlrb1 dynein light chain roadblock-type 1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:150,761,329...150,782,493
Ensembl chr 3:150,761,329...150,782,493
JBrowse link
G Fbxw11 F-box and WD repeat domain containing 11 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:17,542,374...17,640,718
Ensembl chr10:17,542,374...17,640,718
JBrowse link
G Fmr1 FMRP translational regulator 1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:154,684,924...154,722,369
Ensembl chr  X:154,684,935...154,722,314
JBrowse link
G Hap1 huntingtin-associated protein 1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:88,257,975...88,266,210
Ensembl chr10:88,257,976...88,266,210
JBrowse link
G Hdac6 histone deacetylase 6 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:15,396,185...15,417,486
Ensembl chr  X:15,295,473...15,316,671
Ensembl chr  X:15,295,473...15,316,671
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052
JBrowse link
G Hspb1 heat shock protein family B (small) member 1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:23,839,390...23,841,051
Ensembl chr12:23,839,399...23,841,049
JBrowse link
G Kif1a kinesin family member 1A located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:100,171,851...100,253,626
Ensembl chr 9:100,171,772...100,253,609
JBrowse link
G Kif1b kinesin family member 1B located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:165,994,803...166,133,497
Ensembl chr 5:165,938,576...166,133,491
JBrowse link
G Kif1c kinesin family member 1C located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:57,322,259...57,352,395
Ensembl chr10:57,322,331...57,351,353
JBrowse link
G Kif3a kinesin family member 3a IDA RGD PMID:15266650 RGD:11049593 NCBI chr10:38,918,705...38,953,958
Ensembl chr10:38,918,748...38,952,785
JBrowse link
G Kif5a kinesin family member 5A located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:70,515,832...70,552,897
Ensembl chr 7:70,513,343...70,556,827
JBrowse link
G Kif5b kinesin family member 5B located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr17:54,181,416...54,219,048
Ensembl chr17:54,181,419...54,212,096
JBrowse link
G Kif5c kinesin family member 5C located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:35,014,157...35,257,417
Ensembl chr 3:35,014,538...35,257,407
JBrowse link
G Madd MAP-kinase activating death domain located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:79,960,301...80,003,023
Ensembl chr 3:79,960,301...80,003,032
JBrowse link
G Map1a microtubule-associated protein 1A located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:113,251,918...113,272,193
Ensembl chr 3:113,251,778...113,272,186
JBrowse link
G Map6 microtubule-associated protein 6 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:164,225,776...164,292,094
Ensembl chr 1:164,225,934...164,292,093
JBrowse link
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:14,259,394...14,299,276
Ensembl chr10:14,260,787...14,299,167
JBrowse link
G Mgarp mitochondria-localized glutamic acid-rich protein located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:140,444,963...140,453,719
Ensembl chr 2:140,444,965...140,453,107
JBrowse link
G Ndel1 nudE neurodevelopment protein 1-like 1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:55,398,919...55,456,654
Ensembl chr10:55,411,901...55,444,861
JBrowse link
G Nefl neurofilament light located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:44,799,378...44,803,251
Ensembl chr15:44,799,334...44,804,574
JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:61,456,144...61,577,412
Ensembl chr10:61,456,145...61,577,412
JBrowse link
G Rab21 RAB21, member RAS oncogene family located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:58,261,985...58,286,770
Ensembl chr 7:58,261,992...58,286,770
JBrowse link
G Rab27b RAB27B, member RAS oncogene family located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr18:68,486,006...68,644,595
Ensembl chr18:68,488,942...68,551,558
JBrowse link
G Ranbp1 RAN binding protein 1 IDA RGD PMID:18667152 RGD:9835000 NCBI chr11:86,890,585...86,898,818
Ensembl chr11:86,890,585...86,898,818
JBrowse link
G Rangap1 RAN GTPase activating protein 1 IDA RGD PMID:18667152 RGD:9835000 NCBI chr 7:122,939,266...122,967,178
Ensembl chr 7:122,940,376...122,967,178
JBrowse link
G Snapin SNAP-associated protein located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:189,878,159...189,880,743
Ensembl chr 2:189,878,168...189,880,743
JBrowse link
G Sod1 superoxide dismutase 1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr11:30,363,282...30,368,858
Ensembl chr11:30,363,280...30,368,862
JBrowse link
G Spast spastin located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:22,230,067...22,282,166
Ensembl chr 6:22,230,928...22,281,886
JBrowse link
G Spg7 SPG7 matrix AAA peptidase subunit, paraplegin located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:55,880,549...55,914,729
Ensembl chr19:55,880,561...55,915,502
JBrowse link
G Sybu syntabulin located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:83,600,614...83,670,121
Ensembl chr 7:83,600,617...83,670,356
JBrowse link
G Terf2 telomeric repeat binding factor 2 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:39,271,992...39,301,506
Ensembl chr19:39,272,499...39,300,893
JBrowse link
G Tmem108 transmembrane protein 108 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:111,968,568...112,265,623
Ensembl chr 8:111,970,288...111,984,572
JBrowse link
G Trak1 trafficking kinesin protein 1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:129,946,596...130,106,382
Ensembl chr 8:130,009,573...130,106,382
JBrowse link
G Trak2 trafficking kinesin protein 2 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:65,698,706...65,763,351
Ensembl chr 9:65,698,712...65,763,273
JBrowse link
G Trim46 tripartite motif-containing 46 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:188,548,608...188,561,617
Ensembl chr 2:188,548,644...188,561,360
JBrowse link
G Uchl1 ubiquitin C-terminal hydrolase L1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr14:43,133,224...43,143,942
Ensembl chr14:43,133,218...43,143,973
JBrowse link
G Zc3h14 zinc finger CCCH type containing 14 located_in ISO (PMID:28793261) RGD PMID:28793261 NCBI chr 6:122,729,834...122,767,462
Ensembl chr 6:122,729,874...122,767,462
JBrowse link
axonemal basal plate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ift88 intraflagellar transport 88 located_in ISO (MGI:5544506|PMID:24302887) RGD PMID:24302887 MGI:5544506 NCBI chr15:37,690,417...37,786,855
Ensembl chr15:37,691,345...37,784,924
JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector located_in
part_of
IEA
ISO
IBA
GO_REF:0000107
(MGI:5544506|PMID:24302887)
PMID:21873635
Ensembl
RGD
PMID:24302887, PMID:21873635 GO_REF:0000107 MGI:5544506, RGD:13792537 NCBI chr14:106,393,959...106,759,511
Ensembl chr14:106,393,959...106,759,505
JBrowse link
axonemal central apparatus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hydin Hydin, axonemal central pair apparatus protein located_in ISO (MGI:6331463|PMID:30535028) RGD PMID:30535028 MGI:6331463 NCBI chr19:41,036,507...41,379,634
Ensembl chr19:41,036,510...41,379,588
JBrowse link
G LOC102550841 uncharacterized LOC102550841 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:76,913,521...77,007,087
Ensembl chr 9:76,913,639...77,006,527
JBrowse link
G Spag16 sperm associated antigen 16 part_of
located_in
IBA
ISO
PMID:21873635
MGI:3606979 (MGI:3766863|PMID:17699735)
(MGI:2389554|PMID:12391165)
RGD PMID:12391165 PMID:17699735, PMID:21873635 MGI:2389554 MGI:3766863, RGD:13792537 NCBI chr 9:77,027,626...77,833,476
Ensembl chr 9:77,320,726...77,833,281
JBrowse link
G Spag17 sperm associated antigen 17 part_of
located_in
IBA
ISO
PMID:21873635
MGI:4364991 (MGI:3807761|PMID:15827353), (MGI:5576118|PMID:23418344)
RGD PMID:15827353 PMID:23418344, PMID:21873635 MGI:3807761 MGI:5576118, RGD:13792537 NCBI chr 2:202,159,659...202,452,361
Ensembl chr 2:202,200,797...202,443,026
JBrowse link
G Spag6l sperm associated antigen 6-like located_in ISO MGI:1913972 (MGI:3766863|PMID:17699735) RGD PMID:17699735 MGI:3766863 NCBI chr11:88,424,493...88,517,910
Ensembl chr11:88,424,414...88,508,601
JBrowse link
G Spef1 sperm flagellar 1 located_in ISO (MGI:6331463|PMID:30535028) RGD PMID:30535028 MGI:6331463 NCBI chr 3:123,712,907...123,720,787
Ensembl chr 3:123,714,564...123,718,432
JBrowse link
axonemal central pair projection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hydin Hydin, axonemal central pair apparatus protein located_in ISO MGI:1856913 (MGI:3793384|PMID:18250199) RGD PMID:18250199 MGI:3793384 NCBI chr19:41,036,507...41,379,634
Ensembl chr19:41,036,510...41,379,588
JBrowse link
axonemal dynein complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc65 coiled-coil domain containing 65 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:140,383,395...140,397,186
Ensembl chr 7:140,383,397...140,397,179
JBrowse link
G Dnah5 dynein, axonemal, heavy chain 5 part_of ISO MGI:2180081 (MGI:2178772|PMID:11912187) RGD PMID:11912187 MGI:2178772 NCBI chr 2:80,947,730...81,143,997
NCBI chr 2:81,159,060...81,337,560
Ensembl chr 2:80,948,658...81,143,447
JBrowse link
G Dnah6 dynein, axonemal, heavy chain 6 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:100,936,834...101,157,511
Ensembl chr 4:100,936,978...101,156,576
JBrowse link
G Dnai2 dynein, axonemal, intermediate chain 2 part_of ISO (PMID:11153919) RGD PMID:11153919 NCBI chr10:103,266,343...103,301,521
Ensembl chr10:103,266,296...103,301,544
JBrowse link
G Dnai3 dynein axonemal intermediate chain 3 part_of ISO (MGI:6436377|PMID:30060180) RGD PMID:30060180 MGI:6436377 NCBI chr 2:251,912,432...251,970,699
Ensembl chr 2:251,912,368...251,970,768
JBrowse link
G Dnai4 dynein axonemal intermediate chain 4 part_of IBA
ISO
ISS
PMID:21873635
(MGI:6436377|PMID:30060180)
GO_REF:0000024
RGD
UniProt
PMID:30060180, PMID:21873635 GO_REF:0000024 MGI:6436377, RGD:13792537 NCBI chr 5:122,551,370...122,642,161
Ensembl chr 5:122,551,405...122,642,202
JBrowse link
G Dnai7 dynein axonemal intermediate chain 7 part_of ISO (MGI:6436377|PMID:30060180) RGD PMID:30060180 MGI:6436377 NCBI chr 4:179,440,984...179,476,965
Ensembl chr 4:179,440,953...179,477,070
JBrowse link
G Drc1 dynein regulatory complex subunit 1 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:27,425,237...27,460,038
Ensembl chr 6:27,425,235...27,460,038
JBrowse link
axonemal microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arfgef2 ADP ribosylation factor guanine nucleotide exchange factor 2 located_in IDA PMID:15198677 UniProt PMID:15198677 RGD:1304338 NCBI chr 3:163,570,435...163,656,612
Ensembl chr 3:163,570,532...163,656,626
JBrowse link
G Cep162 centrosomal protein 162 part_of
located_in
IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(PMID:23644468)
UniProt
RGD
PMID:23644468, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 8:94,863,282...94,921,917
Ensembl chr 8:94,863,282...94,922,017
JBrowse link
G Rpgrip1l Rpgrip1-like IDA RGD PMID:17558407 RGD:11537356 NCBI chr19:17,115,266...17,208,055
Ensembl chr19:17,115,412...17,208,055
JBrowse link
G Saxo1 stabilizer of axonemal microtubules 1 part_of
located_in
IBA
ISO
PMID:21873635
(PMID:25673876)
RGD PMID:25673876, PMID:21873635 RGD:13792537 NCBI chr 5:104,771,081...104,921,001
Ensembl chr 5:104,771,392...104,920,906
JBrowse link
G Saxo2 stabilizer of axonemal microtubules 2 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:144,586,260...144,601,358
Ensembl chr 1:144,586,260...144,601,335
JBrowse link
G Saxol1 stabilizer of axonemal microtubules like 1 part_of
located_in
IBA
ISS
PMID:21873635
GO_REF:0000024
UniProt PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr  X:29,520,263...29,522,420
Ensembl chr  X:29,520,263...29,522,420
JBrowse link
G Ttc30a1 tetratricopeptide repeat domain 30A1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:62,800,932...62,803,373
Ensembl chr 3:62,800,935...62,803,373
JBrowse link
G Ttc30b tetratricopeptide repeat domain 30B located_in
part_of
IEA
IBA
GO_REF:0000104
PMID:21873635
UniProt PMID:21873635 GO_REF:0000104, RGD:13792537 NCBI chr 3:62,758,754...62,761,325
Ensembl chr 3:62,758,758...62,761,325
JBrowse link
axoneme term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07063281.1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:26,390,689...26,485,049 JBrowse link
G Ak8 adenylate kinase 8 located_in ISO (MGI:5646278|PMID:24740601) RGD PMID:24740601 MGI:5646278 NCBI chr 3:7,279,429...7,394,509
Ensembl chr 3:7,279,340...7,394,513
JBrowse link
G Akap14 A-kinase anchoring protein 14 located_in ISO (PMID:12475942) RGD PMID:12475942 NCBI chr  X:123,773,430...123,788,898
Ensembl chr  X:123,773,430...123,788,898
JBrowse link
G Ambra1 autophagy and beclin 1 regulator 1 located_in ISO (MGI:5527012|PMID:24089209) RGD PMID:24089209 MGI:5527012 NCBI chr 3:80,634,470...80,830,068
Ensembl chr 3:80,634,470...80,830,068
JBrowse link
G Arl13b ADP-ribosylation factor like GTPase 13B part_of ISO (MGI:4888042|PMID:21209331) RGD PMID:21209331 MGI:4888042 NCBI chr 7:1,122,567...1,188,209
Ensembl chr 7:1,122,567...1,188,209
JBrowse link
G Arl3 ADP ribosylation factor like GTPase 3 located_in IEA
ISO
GO_REF:0000107
(MGI:5925653|PMID:26455799)
Ensembl
RGD
PMID:26455799 GO_REF:0000107 MGI:5925653 NCBI chr 1:266,287,015...266,333,099
Ensembl chr 1:266,287,017...266,333,105
JBrowse link
G Arl6 ADP-ribosylation factor like GTPase 6 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:42,858,476...42,884,324
Ensembl chr11:42,858,478...42,884,603
JBrowse link
G Atg14 autophagy related 14 located_in ISS
ISO
GO_REF:0000024
(MGI:5527012|PMID:24089209)
UniProt
RGD
PMID:24089209 GO_REF:0000024 MGI:5527012 NCBI chr15:24,343,418...24,374,776
Ensembl chr15:24,343,314...24,374,753
JBrowse link
G Atg16l1 autophagy related 16-like 1 located_in ISO (MGI:5527012|PMID:24089209) RGD PMID:24089209 MGI:5527012 NCBI chr 9:94,879,876...94,915,231
Ensembl chr 9:94,879,745...94,915,228
JBrowse link
G Atg5 autophagy related 5 located_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5527012|PMID:24089209)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:24089209 GO_REF:0000024 GO_REF:0000107 MGI:5527012 NCBI chr20:49,301,783...49,393,147
Ensembl chr20:49,318,308...49,393,140
JBrowse link
G Atg7 autophagy related 7 located_in ISS
ISO
GO_REF:0000024
(MGI:5527012|PMID:24089209)
UniProt
RGD
PMID:24089209 GO_REF:0000024 MGI:5527012 NCBI chr 4:146,570,113...146,777,093
Ensembl chr 4:146,598,413...146,777,124
JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:220,146,084...220,165,545
Ensembl chr 1:220,147,327...220,165,678
JBrowse link
G Bbs5 Bardet-Biedl syndrome 5 located_in ISO (MGI:5588761|PMID:24833722) RGD PMID:24833722 MGI:5588761 NCBI chr 3:55,886,695...55,907,717
Ensembl chr 3:55,886,695...55,907,716
JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 part_of
located_in
IBA
ISO
PMID:21873635
(MGI:5492028|PMID:22302990)
RGD PMID:22302990, PMID:21873635 MGI:5492028, RGD:13792537 NCBI chr 2:123,283,402...123,322,991
Ensembl chr 2:123,283,388...123,323,170
JBrowse link
G Camsap3 calmodulin regulated spectrin-associated protein family, member 3 located_in ISO (MGI:6436727|PMID:32482850) RGD PMID:32482850 MGI:6436727 NCBI chr12:2,133,935...2,157,403
Ensembl chr12:2,134,022...2,157,403
JBrowse link
G Ccdc113 coiled-coil domain containing 113 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:9,912,124...9,932,183
Ensembl chr19:9,912,183...9,931,930
JBrowse link
G Ccdc39 coiled-coil domain containing 39 part_of
located_in
ISO
IBA
IEA
ISS
(PMID:26387594)
PMID:21873635
GO_REF:0000002
GO_REF:0000024
(PMID:21131972), (PMID:21131974)
RGD
InterPro
UniProt
PMID:21131972 PMID:21131974 PMID:26387594, PMID:21873635 GO_REF:0000002 GO_REF:0000024, RGD:13792537 NCBI chr 2:120,278,605...120,367,829
Ensembl chr 2:120,278,605...120,316,600
JBrowse link
G Ccdc40 coiled-coil domain containing 40 located_in ISO (PMID:23255504) RGD PMID:23255504 NCBI chr10:108,055,270...108,393,408
Ensembl chr10:108,340,240...108,372,862
JBrowse link
G Ccdc63 coiled-coil domain containing 63 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:39,905,120...39,950,719
Ensembl chr12:39,913,628...39,950,641
JBrowse link
G Ccdc65 coiled-coil domain containing 65 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:140,383,395...140,397,186
Ensembl chr 7:140,383,397...140,397,179
JBrowse link
G Ccdc96 coiled-coil domain containing 96 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:79,443,151...79,445,591
Ensembl chr14:79,443,543...79,445,471
JBrowse link
G Ccsap centriole, cilia and spindle-associated protein part_of
located_in
IBA
ISO
PMID:21873635
(PMID:22493317)
RGD PMID:22493317, PMID:21873635 RGD:13792537 NCBI chr19:56,615,326...56,634,031
Ensembl chr19:56,617,399...56,633,633
JBrowse link
G Cenpf centromere protein F located_in ISO (MGI:5694347|PMID:25564561) RGD PMID:25564561 MGI:5694347 NCBI chr13:108,132,499...108,178,609
Ensembl chr13:108,132,499...108,178,609
JBrowse link
G Cfap206 cilia and flagella associated protein 206 located_in ISS
ISO
GO_REF:0000024
(MGI:6452763|PMID:32376681)
UniProt
RGD
PMID:32376681 GO_REF:0000024 MGI:6452763 NCBI chr 5:50,148,685...50,193,580
Ensembl chr 5:50,148,658...50,193,571
JBrowse link
G Cfap36 cilia and flagella associated protein 36 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:113,618,954...113,644,874
Ensembl chr14:113,618,964...113,644,779
JBrowse link
G Cfap43 cilia and flagella associated protein 43 part_of
located_in
IBA
ISO
PMID:21873635
(MGI:6402702|PMID:31884020)
RGD PMID:31884020, PMID:21873635 MGI:6402702, RGD:13792537 NCBI chr 1:267,511,359...267,598,642
Ensembl chr 1:267,511,523...267,598,639
JBrowse link
G Cfap70 cilia and flagella associated protein 70 located_in ISO (MGI:6383288|PMID:30158508) RGD PMID:30158508 MGI:6383288 NCBI chr15:4,285,049...4,350,707
Ensembl chr15:4,285,052...4,350,714
JBrowse link
G Ctsh cathepsin H IDA RGD PMID:12838426 RGD:5686399 NCBI chr 8:97,439,155...97,458,293
Ensembl chr 8:97,439,161...97,458,287
JBrowse link
G Cys1 cystin 1 located_in ISO (MGI:2158985|PMID:11854326), (MGI:4461844|PMID:19850956)
(MGI:4461844|PMID:19850956)
RGD PMID:11854326 PMID:19850956 MGI:2158985 MGI:4461844 NCBI chr 6:43,844,937...43,862,131
Ensembl chr 6:43,844,937...43,862,131
JBrowse link
G Dcdc2 doublecortin domain containing 2 part_of
located_in
IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(PMID:25557784), (PMID:27319779)
UniProt
RGD
PMID:25557784 PMID:27319779, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr17:41,838,201...42,031,265
Ensembl chr17:41,838,201...42,031,265
JBrowse link
G Dcx doublecortin part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:115,098,675...115,175,515
Ensembl chr  X:115,098,675...115,175,299
JBrowse link
G Dnaaf1 dynein, axonemal, assembly factor 1 part_of
located_in
IBA
ISS
IEA
ISO
PMID:21873635
GO_REF:0000024
GO_REF:0000107
(PMID:18385425)
UniProt
Ensembl
RGD
PMID:18385425, PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr19:52,217,427...52,245,930
Ensembl chr19:52,217,984...52,245,929
JBrowse link
G Dnah1 dynein, axonemal, heavy chain 1 located_in ISO
ISS
(PMID:24360805)
GO_REF:0000024
RGD
UniProt
PMID:24360805 GO_REF:0000024 NCBI chr16:7,345,131...7,407,009
Ensembl chr16:7,345,978...7,408,265
JBrowse link
G Dnah11 dynein, axonemal, heavy chain 11 located_in
part_of
ISO
IBA
(PMID:31178125)
(MGI:6120222|PMID:26909801)
PMID:21873635
RGD PMID:26909801 PMID:31178125, PMID:21873635 MGI:6120222, RGD:13792537 NCBI chr 6:145,784,893...146,099,212
Ensembl chr 6:145,785,275...146,099,053
JBrowse link
G Dnah17 dynein, axonemal, heavy chain 17 located_in
part_of
ISO
IBA
(PMID:31178125)
PMID:21873635
RGD PMID:31178125, PMID:21873635 RGD:13792537 NCBI chr10:107,028,115...107,161,288
Ensembl chr10:107,029,466...107,158,997
JBrowse link
G Dnah2 dynein, axonemal, heavy chain 2 located_in
part_of
ISO
IBA
(PMID:31178125)
PMID:21873635
RGD PMID:31178125, PMID:21873635 RGD:13792537 NCBI chr10:56,029,022...56,154,602
Ensembl chr10:56,029,029...56,154,548
JBrowse link
G Dnah5 dynein, axonemal, heavy chain 5 located_in
part_of
ISS
ISO
IBA
GO_REF:0000024
(MGI:5551687|PMID:23849778), (MGI:5607335|PMID:25192045), (MGI:6284218|PMID:29916806)
(PMID:15750039), (PMID:16492982), (PMID:18950741), (PMID:24203976), (PMID:26909801), (PMID:31178125)
(PMID:23849778), (PMID:26387594), (PMID:29916806)
PMID:21873635
UniProt
RGD
PMID:15750039 PMID:16492982 PMID:18950741 PMID:23849778 PMID:24203976 PMID:25192045 PMID:26387594 PMID:26909801 PMID:29916806 PMID:31178125, PMID:21873635 GO_REF:0000024 MGI:5551687 MGI:5607335 MGI:6284218, RGD:13792537 NCBI chr 2:80,947,730...81,143,997
NCBI chr 2:81,159,060...81,337,560
Ensembl chr 2:80,948,658...81,143,447
JBrowse link
G Dnah8 dynein, axonemal, heavy chain 8 located_in ISO (PMID:31178125) RGD PMID:31178125 NCBI chr20:9,301,317...9,560,805
Ensembl chr20:9,313,271...9,560,682
JBrowse link
G Dnah9 dynein, axonemal, heavy chain 9 part_of
located_in
IBA
ISO
PMID:21873635
(PMID:11839535), (PMID:15750039), (PMID:18950741), (PMID:31178125)
(PMID:11104725), (PMID:23849778)
RGD PMID:11104725 PMID:11839535 PMID:15750039 PMID:18950741 PMID:23849778 PMID:31178125, PMID:21873635 RGD:13792537 NCBI chr10:52,351,226...52,711,289
Ensembl chr10:52,351,192...52,710,862
JBrowse link
G Dnai2 dynein, axonemal, intermediate chain 2 part_of
located_in
ISO (PMID:11153919), (PMID:23849778)
(MGI:6284218|PMID:29916806)
(PMID:18950741)
RGD PMID:11153919 PMID:18950741 PMID:23849778 PMID:29916806 MGI:6284218 NCBI chr10:103,266,343...103,301,521
Ensembl chr10:103,266,296...103,301,544
JBrowse link
G Dnai4 dynein axonemal intermediate chain 4 located_in ISS
ISO
GO_REF:0000024
(MGI:6436377|PMID:30060180)
UniProt
RGD
PMID:30060180 GO_REF:0000024 MGI:6436377 NCBI chr 5:122,551,370...122,642,161
Ensembl chr 5:122,551,405...122,642,202
JBrowse link
G Dnajb13 DnaJ heat shock protein family (Hsp40) member B13 located_in ISO (MGI:3806784|PMID:18247331) RGD PMID:18247331 MGI:3806784 NCBI chr 1:165,515,718...165,530,163
Ensembl chr 1:165,515,726...165,530,095
JBrowse link
G Dnali1 dynein, axonemal, light intermediate chain 1 located_in
part_of
ISS
ISO
IBA
GO_REF:0000024
(MGI:3628860|PMID:16496424), (MGI:6284218|PMID:29916806)
PMID:21873635
(PMID:26909801), (PMID:31178125)
(PMID:23849778)
UniProt
RGD
PMID:16496424 PMID:23849778 PMID:26909801 PMID:29916806 PMID:31178125, PMID:21873635 GO_REF:0000024 MGI:3628860 MGI:6284218, RGD:13792537 NCBI chr 5:143,053,365...143,062,203
Ensembl chr 5:143,053,367...143,062,226
JBrowse link
G Drc1 dynein regulatory complex subunit 1 located_in
part_of
ISS
IBA
GO_REF:0000024
PMID:21873635
UniProt PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 6:27,425,237...27,460,038
Ensembl chr 6:27,425,235...27,460,038
JBrowse link
G Drc3 dynein regulatory complex subunit 3 part_of ISO (PMID:26387594) RGD PMID:26387594 NCBI chr10:46,712,021...46,762,276
Ensembl chr10:46,722,109...46,762,250
JBrowse link
G Dync2h1 dynein cytoplasmic 2 heavy chain 1 located_in
part_of
IEA
ISO
IBA
GO_REF:0000107
(MGI:5009180|PMID:12802074)
PMID:21873635
Ensembl
RGD
PMID:12802074, PMID:21873635 GO_REF:0000107 MGI:5009180, RGD:13792537 NCBI chr 8:5,217,054...5,436,969
Ensembl chr 8:5,217,217...5,429,581
JBrowse link
G Dync2i2 dynein 2 intermediate chain 2 located_in ISO (MGI:5551675|PMID:24183451) RGD PMID:24183451 MGI:5551675 NCBI chr 3:8,599,251...8,615,329
Ensembl chr 3:8,599,148...8,615,532
JBrowse link
G Dync2li1 dynein cytoplasmic 2 light intermediate chain 1 part_of
located_in
IBA
ISO
PMID:21873635
(MGI:5009180|PMID:12802074)
RGD PMID:12802074, PMID:21873635 MGI:5009180, RGD:13792537 NCBI chr 6:7,900,962...7,933,795
Ensembl chr 6:7,900,972...7,933,796
JBrowse link
G Dynlt2b dynein light chain Tctex-type 2B colocalizes_with ISO (PMID:25830415) RGD PMID:25830415 NCBI chr11:71,593,302...71,601,662
Ensembl chr11:71,593,302...71,601,662
JBrowse link
G Dynlt4 dynein light chain Tctex-type 4 located_in ISO (PMID:23789093)
(MGI:5510909|PMID:23789093)
RGD PMID:23789093 MGI:5510909 NCBI chr 5:135,995,128...135,997,807
Ensembl chr 5:135,997,052...135,997,711
JBrowse link
G Dzip1l DAZ interacting zinc finger protein 1-like located_in ISO (MGI:6149643|PMID:29487109) RGD PMID:29487109 MGI:6149643 NCBI chr 8:107,875,659...107,916,298
Ensembl chr 8:107,875,991...107,916,294
JBrowse link
G Efhc1 EF-hand domain containing 1 part_of
located_in
IBA
ISO
PMID:21873635
(MGI:3529636|PMID:15670853)
RGD PMID:15670853, PMID:21873635 MGI:3529636, RGD:13792537 NCBI chr 9:27,068,505...27,107,713
Ensembl chr 9:27,068,443...27,107,709
JBrowse link
G Efhc2 EF-hand domain containing 2 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:5,825,551...6,026,398
Ensembl chr  X:5,825,711...6,026,398
JBrowse link
G Gabarap GABA type A receptor-associated protein located_in ISS
ISO
GO_REF:0000024
(MGI:5527012|PMID:24089209)
UniProt
RGD
PMID:24089209 GO_REF:0000024 MGI:5527012 NCBI chr10:56,601,288...56,604,223
Ensembl chr10:56,601,288...56,604,221
JBrowse link
G Gas8 growth arrest specific 8 located_in
part_of
ISS
ISO
GO_REF:0000024
(PMID:16643277), (PMID:26387594)
(PMID:26387594)
UniProt
RGD
PMID:16643277 PMID:26387594 GO_REF:0000024 NCBI chr19:56,316,367...56,335,873
Ensembl chr19:56,316,268...56,335,870
JBrowse link
G Gli1 GLI family zinc finger 1 part_of ISO (MGI:3692156|PMID:16254602) RGD PMID:16254602 MGI:3692156 NCBI chr 7:70,620,794...70,633,171
Ensembl chr 7:70,620,766...70,630,338
JBrowse link
G Gli2 GLI family zinc finger 2 part_of ISO (MGI:4888042|PMID:21209331) RGD PMID:21209331 MGI:4888042 NCBI chr13:34,829,021...35,049,172
Ensembl chr13:34,829,139...35,048,444
JBrowse link
G Gli3 GLI family zinc finger 3 part_of ISO (MGI:4888042|PMID:21209331) RGD PMID:21209331 MGI:4888042 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Gnat3 G protein subunit alpha transducin 3 IDA RGD PMID:17021831 RGD:2302145 NCBI chr 4:13,827,764...13,878,126
Ensembl chr 4:13,827,756...13,878,126
JBrowse link
G Ift140 intraflagellar transport 140 part_of
located_in
IBA
ISO
PMID:21873635
(MGI:4460838|PMID:20368623), (MGI:5553228|PMID:23418020)
RGD PMID:20368623 PMID:23418020, PMID:21873635 MGI:4460838 MGI:5553228, RGD:13792537 NCBI chr10:14,373,668...14,461,509
Ensembl chr10:14,373,679...14,461,160
JBrowse link
G Ift172 intraflagellar transport 172 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:26,390,686...26,485,459 JBrowse link
G Ift57 intraflagellar transport 57 part_of ISO (MGI:4888042|PMID:21209331) RGD PMID:21209331 MGI:4888042 NCBI chr11:53,664,638...53,731,779
Ensembl chr11:53,664,638...53,731,779
JBrowse link
G Ift88 intraflagellar transport 88 located_in ISO (MGI:2158985|PMID:11854326), (MGI:2664063|PMID:11251073), (MGI:3773480|PMID:18066062), (MGI:4460838|PMID:20368623), (MGI:5544506|PMID:24302887) RGD PMID:11251073 PMID:11854326 PMID:18066062 PMID:20368623 PMID:24302887 MGI:2158985 MGI:2664063 MGI:3773480 MGI:4460838 MGI:5544506 NCBI chr15:37,690,417...37,786,855
Ensembl chr15:37,691,345...37,784,924
JBrowse link
G Inpp5e inositol polyphosphate-5-phosphatase E located_in ISO
ISS
(PMID:19668215)
(MGI:4359555|PMID:19668215)
GO_REF:0000024
RGD
UniProt
PMID:19668215 GO_REF:0000024 MGI:4359555 NCBI chr 3:3,843,307...3,856,154
Ensembl chr 3:3,843,307...3,855,981
JBrowse link
G Kif17 kinesin family member 17 located_in ISO (MGI:4353477|PMID:19384852) RGD PMID:19384852 MGI:4353477 NCBI chr 5:156,628,409...156,665,752
Ensembl chr 5:156,628,432...156,666,284
JBrowse link
G Kif19 kinesin family member 19 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:103,308,392...103,334,466
Ensembl chr10:103,308,392...103,334,466
JBrowse link
G Kif3a kinesin family member 3a IDA RGD PMID:9920666 RGD:1581597 NCBI chr10:38,918,705...38,953,958
Ensembl chr10:38,918,748...38,952,785
JBrowse link
G Kifap3 kinesin-associated protein 3 part_of
located_in
IBA
ISO
PMID:21873635
(MGI:4353477|PMID:19384852)
RGD PMID:19384852, PMID:21873635 MGI:4353477, RGD:13792537 NCBI chr13:82,072,497...82,217,256
Ensembl chr13:82,072,497...82,217,252
JBrowse link
G Lca5 lebercilin LCA5 part_of
located_in
IBA
ISO
PMID:21873635
(MGI:5588761|PMID:24833722)
RGD PMID:24833722, PMID:21873635 MGI:5588761, RGD:13792537 NCBI chr 8:90,926,309...90,984,271
Ensembl chr 8:90,926,311...90,984,224
JBrowse link
G Lca5l lebercilin LCA5 like part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:36,512,823...36,546,806
Ensembl chr11:36,512,974...36,533,073
JBrowse link
G LOC103691261 sperm flagellar protein 1-like part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:212,309,940...212,317,411
Ensembl chr 1:212,311,300...212,317,244
JBrowse link
G Mak male germ cell-associated kinase located_in ISO (MGI:5298333|PMID:21148103) RGD PMID:21148103 MGI:5298333 NCBI chr17:21,531,651...21,567,742
Ensembl chr17:21,521,505...21,568,440
JBrowse link
G Map1lc3b microtubule-associated protein 1 light chain 3 beta located_in ISO (MGI:5527012|PMID:24089209) RGD PMID:24089209 MGI:5527012 NCBI chr19:53,635,449...53,643,970
Ensembl chr19:53,629,779...53,646,058
JBrowse link
G Map4 microtubule-associated protein 4 located_in ISO (PMID:23572511) RGD PMID:23572511 NCBI chr 8:118,013,584...118,159,934
Ensembl chr 8:118,013,612...118,159,933
JBrowse link
G Mapk15 mitogen-activated protein kinase 15 NOT|located_in ISO (PMID:29021280) RGD PMID:29021280 NCBI chr 7:117,041,287...117,061,799
Ensembl chr 7:117,055,395...117,061,047
JBrowse link
G Mapt microtubule-associated protein tau located_in ISO (MGI:3821640|PMID:19004860) RGD PMID:19004860 MGI:3821640 NCBI chr10:92,289,002...92,386,517
Ensembl chr10:92,288,910...92,386,517
JBrowse link
G Mns1 meiosis-specific nuclear structural 1 located_in ISO (MGI:5318625|PMID:22396656) RGD PMID:22396656 MGI:5318625 NCBI chr 8:79,054,240...79,075,119
Ensembl chr 8:79,054,237...79,075,122
JBrowse link
G Nme8 NME/NM23 family member 8 part_of ISO (MGI:2680785|PMID:12909633) RGD PMID:12909633 MGI:2680785 NCBI chr17:47,300,932...47,368,543
Ensembl chr17:47,301,511...47,368,553
JBrowse link
G Odad1 outer dynein arm docking complex subunit 1 located_in
part_of
ISO
IBA
(PMID:25192045)
PMID:21873635
RGD PMID:25192045, PMID:21873635 RGD:13792537 NCBI chr 1:101,904,042...101,932,999
Ensembl chr 1:101,906,903...101,932,998
JBrowse link
G Odad2 outer dynein arm docking complex subunit 2 located_in
part_of
ISO (PMID:24203976)
(PMID:23849778)
RGD PMID:23849778 PMID:24203976 NCBI chr17:60,283,926...60,474,289
Ensembl chr17:60,287,203...60,474,031
JBrowse link
G Odad3 outer dynein arm docking complex subunit 3 located_in ISO (PMID:25192045) RGD PMID:25192045 NCBI chr 8:23,000,912...23,014,707
Ensembl chr 8:23,000,872...23,014,499
JBrowse link
G Odad4 outer dynein arm docking complex subunit 4 located_in ISO (PMID:27486780) RGD PMID:27486780 NCBI chr10:88,459,490...88,488,237
Ensembl chr10:88,459,490...88,488,237
JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase, catalytic subunit type 3 located_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr18:22,964,121...23,047,896
Ensembl chr18:22,964,210...23,047,895
JBrowse link
G Pik3r4 phosphoinositide-3-kinase, regulatory subunit 4 located_in ISS
ISO
GO_REF:0000024
(MGI:5527012|PMID:24089209)
UniProt
RGD
PMID:24089209 GO_REF:0000024 MGI:5527012 NCBI chr 8:114,300,248...114,350,686
Ensembl chr 8:114,300,257...114,350,681
JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha colocalizes_with
located_in
ISO
IEA
(PMID:12475942)
GO_REF:0000107
RGD
Ensembl
PMID:12475942 GO_REF:0000107 NCBI chr19:25,095,089...25,118,869
Ensembl chr19:25,095,089...25,118,860
JBrowse link
G Prkar1a protein kinase cAMP-dependent type I regulatory subunit alpha colocalizes_with ISO (PMID:12475942) RGD PMID:12475942 NCBI chr10:97,940,705...97,959,199
Ensembl chr10:97,940,705...97,957,336
JBrowse link
G Prkar2a protein kinase cAMP-dependent type II regulatory subunit alpha colocalizes_with
located_in
ISO
IEA
(PMID:12475942)
GO_REF:0000107
RGD
Ensembl
PMID:12475942 GO_REF:0000107 NCBI chr 8:117,486,085...117,548,768
Ensembl chr 8:117,486,083...117,546,370
JBrowse link
G Rp1 RP1, axonemal microtubule associated part_of
located_in
IBA
ISO
PMID:21873635
(MGI:2676521|PMID:14507858), (MGI:4460838|PMID:20368623), (MGI:4461813|PMID:20592197), (MGI:5588761|PMID:24833722), (MGI:6194004|PMID:29899041)
RGD PMID:14507858 PMID:20368623 PMID:20592197 PMID:24833722 PMID:29899041, PMID:21873635 MGI:2676521 MGI:4460838 MGI:4461813 MGI:5588761 MGI:6194004, RGD:13792537 NCBI chr 5:15,005,028...15,060,508
Ensembl chr 5:15,043,955...15,060,508
JBrowse link
G Rp1l1 RP1 like 1 part_of
located_in
IBA
ISO
PMID:21873635
(MGI:4353917|PMID:19657028)
RGD PMID:19657028, PMID:21873635 MGI:4353917, RGD:13792537 NCBI chr15:47,344,380...47,384,461
Ensembl chr15:47,373,120...47,383,508
JBrowse link
G Rpgrip1 RPGR interacting protein 1 located_in ISO (MGI:1933524|PMID:11104772) RGD PMID:11104772 MGI:1933524 NCBI chr15:28,521,287...28,575,046
Ensembl chr15:28,522,737...28,574,737
JBrowse link
G Rpgrip1l Rpgrip1-like part_of ISO (PMID:17558409) RGD PMID:17558409 NCBI chr19:17,115,266...17,208,055
Ensembl chr19:17,115,412...17,208,055
JBrowse link
G Rsph4a radial spoke head component 4A located_in
part_of
ISO
IBA
(PMID:23255504)
PMID:21873635
RGD PMID:23255504, PMID:21873635 RGD:13792537 NCBI chr20:32,450,701...32,467,362
Ensembl chr20:32,450,733...32,467,194
Ensembl chr20:32,450,733...32,467,194
JBrowse link
G Rsph6a radial spoke head 6 homolog A part_of
located_in
IBA
ISO
PMID:21873635
(MGI:6279049|PMID:30239614)
RGD PMID:30239614, PMID:21873635 MGI:6279049, RGD:13792537 NCBI chr 1:79,959,555...79,979,217
Ensembl chr 1:79,959,591...79,979,205
JBrowse link
G Rsph9 radial spoke head component 9 part_of
located_in
IBA
ISO
PMID:21873635
(MGI:6451324|PMID:30383886)
(PMID:26909801)
RGD PMID:26909801 PMID:30383886, PMID:21873635 MGI:6451324, RGD:13792537 NCBI chr 9:17,224,589...17,245,093
Ensembl chr 9:17,225,122...17,245,093
JBrowse link
G Septin2 septin 2 located_in ISO (PMID:23572511) RGD PMID:23572511 NCBI chr 9:100,624,876...100,658,053
Ensembl chr 9:100,624,876...100,658,050
JBrowse link
G Septin7 septin 7 located_in ISS
ISO
GO_REF:0000024
(PMID:23572511)
UniProt
RGD
PMID:23572511 GO_REF:0000024 NCBI chr 8:26,412,910...26,476,615
Ensembl chr 8:26,413,233...26,476,611
JBrowse link
G Septin9 septin 9 located_in ISO
IEA
(PMID:23572511)
GO_REF:0000107
RGD
Ensembl
PMID:23572511 GO_REF:0000107 NCBI chr10:106,208,308...106,340,747
Ensembl chr10:106,264,434...106,348,490
JBrowse link
G Spag16 sperm associated antigen 16 located_in ISO (MGI:3844768|PMID:19305393)
(MGI:3052627|PMID:15328412)
(MGI:3619868|PMID:16382026)
RGD PMID:15328412 PMID:16382026 PMID:19305393 MGI:3052627 MGI:3619868 MGI:3844768 NCBI chr 9:77,027,626...77,833,476
Ensembl chr 9:77,320,726...77,833,281
JBrowse link
G Spag6l sperm associated antigen 6-like located_in ISO (PMID:10493827)
(MGI:6331463|PMID:30535028)
RGD PMID:10493827 PMID:30535028 MGI:6331463 NCBI chr11:88,424,493...88,517,910
Ensembl chr11:88,424,414...88,508,601
JBrowse link
G Spata4 spermatogenesis associated 4 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:39,961,160...39,970,530
Ensembl chr16:39,961,149...39,970,532
JBrowse link
G Spata7 spermatogenesis associated 7 located_in
part_of
ISO
IBA
ISS
IEA
(PMID:25398945)
PMID:21873635
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:25398945, PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr 6:122,603,248...122,648,718
Ensembl chr 6:122,603,269...122,648,699
JBrowse link
G Spef1 sperm flagellar 1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:123,712,907...123,720,787
Ensembl chr 3:123,714,564...123,718,432
JBrowse link
G Tmem67 transmembrane protein 67 colocalizes_with IDA RGD PMID:23516626 RGD:11535084 NCBI chr 5:25,666,138...25,721,056
Ensembl chr 5:25,666,137...25,721,072
JBrowse link
G Traf3ip1 TRAF3 interacting protein 1 part_of
located_in
IBA
ISO
PMID:21873635
(MGI:5298450|PMID:21945076)
RGD PMID:21945076, PMID:21873635 MGI:5298450, RGD:13792537 NCBI chr 9:98,621,499...98,658,223
Ensembl chr 9:98,621,506...98,656,901
JBrowse link
G Ttll10 tubulin tyrosine ligase like 10 located_in ISS
ISO
GO_REF:0000024
(MGI:3850271|PMID:19524510)
UniProt
RGD
PMID:19524510 GO_REF:0000024 MGI:3850271 NCBI chr 5:173,471,020...173,517,783
Ensembl chr 5:173,471,010...173,484,986
JBrowse link
G Ttll3 tubulin tyrosine ligase like 3 located_in ISO (MGI:3850271|PMID:19524510) RGD PMID:19524510 MGI:3850271 NCBI chr 4:145,341,059...145,366,614
Ensembl chr 4:145,342,193...145,365,496
JBrowse link
G Ttll8 tubulin tyrosine ligase like 8 located_in ISO (MGI:3850271|PMID:19524510) RGD PMID:19524510 MGI:3850271 NCBI chr 7:129,906,998...129,948,578 JBrowse link
G Tubb4a tubulin, beta 4A class IVa located_in ISO (PMID:12475942) RGD PMID:12475942 NCBI chr 9:9,961,020...9,968,420
Ensembl chr 9:9,961,021...9,968,486
JBrowse link
G Tulp3 TUB like protein 3 located_in ISO (MGI:3841503|PMID:19286674) RGD PMID:19286674 MGI:3841503 NCBI chr 4:161,636,084...161,677,807
Ensembl chr 4:161,637,892...161,658,519
JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector located_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr14:106,393,959...106,759,511
Ensembl chr14:106,393,959...106,759,505
JBrowse link
G Wdr11 WD repeat domain 11 located_in ISO (MGI:6116377|PMID:29263200) RGD PMID:29263200 MGI:6116377 NCBI chr 1:202,770,810...202,816,336
Ensembl chr 1:202,770,775...202,816,334
JBrowse link
G Wdr35 WD repeat domain 35 located_in
part_of
ISS
ISO
IBA
GO_REF:0000024
(MGI:4950635|PMID:21473986)
PMID:21873635
UniProt
RGD
PMID:21473986, PMID:21873635 GO_REF:0000024 MGI:4950635, RGD:13792537 NCBI chr 6:34,094,291...34,152,048
Ensembl chr 6:34,094,306...34,151,622
JBrowse link
ciliary plasm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dync2i1 dynein 2 intermediate chain 1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:144,069,077...144,124,975
Ensembl chr 6:144,069,022...144,123,729
JBrowse link
G Dync2i2 dynein 2 intermediate chain 2 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:8,599,251...8,615,329
Ensembl chr 3:8,599,148...8,615,532
JBrowse link
G Nek4 NIMA-related kinase 4 IDA RGD PMID:21685204 RGD:13204813 NCBI chr16:7,035,002...7,080,272
Ensembl chr16:7,035,068...7,075,554
JBrowse link
dendrite cytoplasm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd12 abhydrolase domain containing 12, lysophospholipase located_in ISO (MGI:6094388|PMID:27307232) RGD PMID:27307232 MGI:6094388 NCBI chr 3:146,630,298...146,690,375
Ensembl chr 3:146,630,299...146,690,375
JBrowse link
G Abhd13 abhydrolase domain containing 13 located_in ISO (MGI:6094388|PMID:27307232) RGD PMID:27307232 MGI:6094388 NCBI chr16:85,315,275...85,330,108
Ensembl chr16:85,315,275...85,330,092
JBrowse link
G Ada adenosine deaminase IDA RGD PMID:2253038 RGD:2291858 NCBI chr 3:160,115,840...160,139,947
Ensembl chr 3:160,115,842...160,139,947
JBrowse link
G Camk2a calcium/calmodulin-dependent protein kinase II alpha located_in IDA PMID:1419001 BHF-UCL PMID:1419001 RGD:68238 NCBI chr18:56,193,978...56,295,869
Ensembl chr18:56,193,978...56,295,869
JBrowse link
G Canx calnexin IDA RGD PMID:10461883 RGD:2313156 NCBI chr10:35,800,942...35,833,939
Ensembl chr10:35,800,942...35,833,861
JBrowse link
G Ccin calicin part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:59,452,348...59,454,235
Ensembl chr 5:59,452,348...59,454,233
JBrowse link
G Cdkl5 cyclin-dependent kinase-like 5 located_in
part_of
IDA
IBA
PMID:20861382
PMID:21873635
BHF-UCL
GO_Central
PMID:20861382, PMID:21873635 RGD:8554575, RGD:13792537 NCBI chr  X:35,536,396...35,773,204
Ensembl chr  X:35,599,258...35,771,711
JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 located_in IDA PMID:1419001 BHF-UCL PMID:1419001 RGD:68238 NCBI chr10:56,625,845...56,655,543
Ensembl chr10:56,627,411...56,653,599
JBrowse link
G Flot2 flotillin 2 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:65,304,901...65,329,332
Ensembl chr10:65,304,902...65,329,312
JBrowse link
G Gabarapl1 GABA type A receptor associated protein like 1 IDA RGD PMID:16650615 RGD:4890439 NCBI chr 4:163,293,724...163,302,866
Ensembl chr 4:163,293,724...163,302,858
JBrowse link
G Gria2 glutamate ionotropic receptor AMPA type subunit 2 IDA RGD PMID:17207780 RGD:1642304 NCBI chr 2:179,584,302...179,704,629
Ensembl chr 2:179,584,308...179,704,629
JBrowse link
G Grik2 glutamate ionotropic receptor kainate type subunit 2 IDA RGD PMID:15844209 RGD:1642495 NCBI chr20:53,791,428...54,517,691
Ensembl chr20:53,789,760...54,517,709
JBrowse link
G Grik3 glutamate ionotropic receptor kainate type subunit 3 IDA RGD PMID:15844209 RGD:1642495 NCBI chr 5:143,500,441...143,715,546
Ensembl chr 5:143,500,441...143,715,546
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:96,222,093...96,238,845
Ensembl chr13:96,225,912...96,238,572
JBrowse link
G Hpca hippocalcin IDA RGD PMID:8233019 RGD:9686436 NCBI chr 5:147,295,124...147,305,757
Ensembl chr 5:147,294,820...147,303,346
JBrowse link
G Kcnab1 potassium voltage-gated channel subfamily A member regulatory beta subunit 1 IDA RGD PMID:8756417 RGD:9743934 NCBI chr 2:155,555,798...156,011,438
Ensembl chr 2:155,718,359...156,009,526
JBrowse link
G Kif17 kinesin family member 17 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:156,628,409...156,665,752
Ensembl chr 5:156,628,432...156,666,284
JBrowse link
G Kif5a kinesin family member 5A located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:70,515,832...70,552,897
Ensembl chr 7:70,513,343...70,556,827
JBrowse link
G Kif5b kinesin family member 5B located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr17:54,181,416...54,219,048
Ensembl chr17:54,181,419...54,212,096
JBrowse link
G Kif5c kinesin family member 5C located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:35,014,157...35,257,417
Ensembl chr 3:35,014,538...35,257,407
JBrowse link
G Klhl17 kelch-like family member 17 part_of IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:12063253, PMID:21873635 RGD:625502, RGD:13792537 NCBI chr 5:173,654,238...173,659,706
Ensembl chr 5:173,654,860...173,659,675
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 located_in ISO (PMID:21696411) RGD PMID:21696411 NCBI chr 7:132,857,311...133,018,549
Ensembl chr 7:132,857,628...133,018,584
JBrowse link
G Map2 microtubule-associated protein 2 located_in IDA PMID:3517689 ARUK-UCL PMID:3517689 RGD:13514082 NCBI chr 9:73,204,753...73,462,965
Ensembl chr 9:73,319,710...73,462,972
JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 IDA RGD PMID:9714150 RGD:2293331 NCBI chr 8:69,134,218...69,722,573
Ensembl chr 8:69,134,223...69,164,758
JBrowse link
G Map2k4 mitogen activated protein kinase kinase 4 IDA RGD PMID:9714150 RGD:2293331 NCBI chr10:52,196,121...52,301,887
Ensembl chr10:52,196,124...52,290,657
JBrowse link
G Mapk1 mitogen activated protein kinase 1 IDA RGD PMID:9714150 RGD:2293331 NCBI chr11:88,203,863...88,273,301
Ensembl chr11:88,211,599...88,273,254
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 IDA RGD PMID:9714150 RGD:2293331 NCBI chr16:9,620,854...9,709,342
Ensembl chr16:9,625,177...9,709,347
JBrowse link
G Oprm1 opioid receptor, mu 1 IDA RGD PMID:16194531 RGD:2316627 NCBI chr 1:43,454,803...43,704,948
Ensembl chr 1:43,454,803...43,704,948
JBrowse link
G Pura purine rich element binding protein A located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr18:29,104,712...29,114,918
Ensembl chr18:29,110,242...29,111,156
JBrowse link
G Sfpq splicing factor proline and glutamine rich located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:145,079,803...145,088,517
Ensembl chr 5:145,079,803...145,088,498
JBrowse link
G Sod1 superoxide dismutase 1 located_in ISO
ISS
(PMID:17324120)
GO_REF:0000024
RGD
UniProt
PMID:17324120 GO_REF:0000024 NCBI chr11:30,363,282...30,368,858
Ensembl chr11:30,363,280...30,368,862
JBrowse link
G Stau1 staufen double-stranded RNA binding protein 1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:163,703,204...163,748,996
Ensembl chr 3:163,703,204...163,748,996
JBrowse link
G Stau2 staufen double-stranded RNA binding protein 2 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:2,257,910...2,497,429 JBrowse link
G Trak2 trafficking kinesin protein 2 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:65,698,706...65,763,351
Ensembl chr 9:65,698,712...65,763,273
JBrowse link
G Uhmk1 U2AF homology motif kinase 1 located_in ISO (MGI:3835232|PMID:19015237) RGD PMID:19015237 MGI:3835232 NCBI chr13:88,521,625...88,536,728
Ensembl chr13:88,521,625...88,536,728
JBrowse link
G Wasf1 WASP family member 1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr20:48,456,191...48,503,768
Ensembl chr20:48,455,705...48,503,898
JBrowse link
G Wls Wnt ligand secretion mediator IDA RGD PMID:22001156 RGD:7488965 NCBI chr 2:266,315,036...266,431,220
Ensembl chr 2:266,315,036...266,432,558
JBrowse link
G Zc3h14 zinc finger CCCH type containing 14 located_in ISO (PMID:28793261) RGD PMID:28793261 NCBI chr 6:122,729,834...122,767,462
Ensembl chr 6:122,729,874...122,767,462
JBrowse link
dendritic spine cytoplasm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Baiap2 BAR/IMD domain containing adaptor protein 2 IDA RGD PMID:15673667 RGD:9684988 NCBI chr10:109,107,326...109,187,458
Ensembl chr10:109,107,389...109,187,115
JBrowse link
distal portion of axoneme term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnah9 dynein, axonemal, heavy chain 9 located_in ISO (PMID:26909801), (PMID:30471717) RGD PMID:26909801 PMID:30471717 NCBI chr10:52,351,226...52,711,289
Ensembl chr10:52,351,192...52,710,862
JBrowse link
inner dynein arm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnah1 dynein, axonemal, heavy chain 1 part_of IBA
ISO
PMID:21873635
(PMID:24360805)
RGD PMID:24360805, PMID:21873635 RGD:13792537 NCBI chr16:7,345,131...7,407,009
Ensembl chr16:7,345,978...7,408,265
JBrowse link
G Dnah12 dynein, axonemal, heavy chain 12 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:2,377,218...2,534,130
Ensembl chr16:2,379,480...2,534,131
JBrowse link
G Dnah7 dynein, axonemal, heavy chain 7 part_of IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:11877439)
Ensembl
RGD
PMID:11877439, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 9:60,070,087...60,330,121
NCBI chr 9:59,564,253...59,595,347
Ensembl chr 9:60,070,739...60,330,125
Ensembl chr 9:60,070,739...60,330,125
JBrowse link
G Dnai3 dynein axonemal intermediate chain 3 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:251,912,432...251,970,699
Ensembl chr 2:251,912,368...251,970,768
JBrowse link
G Dnhd1 dynein heavy chain domain 1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:170,473,792...170,570,220
Ensembl chr 1:170,471,272...170,565,063
JBrowse link
neuronal ribonucleoprotein granule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07027799.1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr17:44,418,972...44,420,596 JBrowse link
G Arc activity-regulated cytoskeleton-associated protein located_in ISO (MGI:5546446|PMID:23936366) RGD PMID:23936366 MGI:5546446 NCBI chr 7:115,907,097...115,911,059
Ensembl chr 7:115,907,097...115,910,541
JBrowse link
G Ckap5 cytoskeleton associated protein 5 located_in ISO (MGI:5546446|PMID:23936366) RGD PMID:23936366 MGI:5546446 NCBI chr 3:80,424,320...80,526,583
Ensembl chr 3:80,468,154...80,526,593
JBrowse link
G Fmr1 FMRP translational regulator 1 part_of
located_in
IDA
ISO
PMID:17881655
(MGI:3798322|PMID:18539120), (MGI:5296435|PMID:21933836)
RGD PMID:18539120 PMID:21933836, PMID:17881655 MGI:3798322 MGI:5296435, RGD:8553560 NCBI chr  X:154,684,924...154,722,369
Ensembl chr  X:154,684,935...154,722,314
JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 IDA RGD PMID:14523087 RGD:9685480 NCBI chr 4:81,237,496...81,241,281
Ensembl chr 4:81,237,496...81,241,282
JBrowse link
G Hnrnpab heterogeneous nuclear ribonucleoprotein A/B IDA RGD PMID:21471000 RGD:9999187 NCBI chr10:34,955,713...34,961,662
Ensembl chr10:34,955,716...34,961,608
Ensembl chr10:34,955,716...34,961,608
JBrowse link
G Htt huntingtin IDA RGD PMID:22355657 RGD:6902916 NCBI chr14:81,105,139...81,254,637
Ensembl chr14:81,105,139...81,254,637
JBrowse link
G Kif3c kinesin family member 3C part_of IDA PMID:17881655 MGI PMID:17881655 RGD:8553560 NCBI chr 6:27,768,943...27,815,611
Ensembl chr 6:27,768,943...27,815,611
JBrowse link
G Pqbp1 polyglutamine binding protein 1 located_in IEA
ISO
GO_REF:0000107
(MGI:5296435|PMID:21933836)
Ensembl
RGD
PMID:21933836 GO_REF:0000107 MGI:5296435 NCBI chr  X:15,448,570...15,453,130
Ensembl chr  X:15,348,138...15,453,130
JBrowse link
G RGD1561897 similar to Serine/threonine-protein kinase Kist (Kinase interacting with stathmin) part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:44,418,463...44,420,729 JBrowse link
G Uhmk1 U2AF homology motif kinase 1 part_of
located_in
IBA
ISO
PMID:21873635
(MGI:3835232|PMID:19015237)
RGD PMID:19015237, PMID:21873635 MGI:3835232, RGD:13792537 NCBI chr13:88,521,625...88,536,728
Ensembl chr13:88,521,625...88,536,728
JBrowse link
outer dynein arm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc103 coiled-coil domain containing 103 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:90,984,213...90,987,829
Ensembl chr10:90,984,227...90,987,823
JBrowse link
G Cfap70 cilia and flagella associated protein 70 part_of ISO (PMID:31621862) RGD PMID:31621862 NCBI chr15:4,285,049...4,350,707
Ensembl chr15:4,285,052...4,350,714
JBrowse link
G Dnah17 dynein, axonemal, heavy chain 17 part_of ISO (PMID:31178125) RGD PMID:31178125 NCBI chr10:107,028,115...107,161,288
Ensembl chr10:107,029,466...107,158,997
JBrowse link
G Dnah5 dynein, axonemal, heavy chain 5 part_of ISO (PMID:11062149), (PMID:11788826), (PMID:16627867), (PMID:22499950)
(MGI:6147712|PMID:27353389)
RGD PMID:11062149 PMID:11788826 PMID:16627867 PMID:22499950 PMID:27353389 MGI:6147712 NCBI chr 2:80,947,730...81,143,997
NCBI chr 2:81,159,060...81,337,560
Ensembl chr 2:80,948,658...81,143,447
JBrowse link
G Dnah8 dynein, axonemal, heavy chain 8 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:9,301,317...9,560,805
Ensembl chr20:9,313,271...9,560,682
JBrowse link
G Dnah9 dynein, axonemal, heavy chain 9 part_of ISO (MGI:6147712|PMID:27353389) RGD PMID:27353389 MGI:6147712 NCBI chr10:52,351,226...52,711,289
Ensembl chr10:52,351,192...52,710,862
JBrowse link
G Dnai1 dynein, axonemal, intermediate chain 1 part_of IBA
ISO
PMID:21873635
(PMID:11231901), (PMID:16858015)
RGD PMID:11231901 PMID:16858015, PMID:21873635 RGD:13792537 NCBI chr 5:57,947,796...58,017,985
Ensembl chr 5:57,947,716...58,017,992
JBrowse link
G Dnai2 dynein, axonemal, intermediate chain 2 part_of IBA
ISO
PMID:21873635
(PMID:18950741)
RGD PMID:18950741, PMID:21873635 RGD:13792537 NCBI chr10:103,266,343...103,301,521
Ensembl chr10:103,266,296...103,301,544
JBrowse link
G Dync1i2 dynein cytoplasmic 1 intermediate chain 2 part_of ISO (MGI:6147712|PMID:27353389) RGD PMID:27353389 MGI:6147712 NCBI chr 3:57,817,677...57,868,854
Ensembl chr 3:57,817,693...57,868,854
JBrowse link
G Nme8 NME/NM23 family member 8 part_of ISO
IEA
(PMID:17360648)
GO_REF:0000107
RGD
Ensembl
PMID:17360648 GO_REF:0000107 NCBI chr17:47,300,932...47,368,543
Ensembl chr17:47,301,511...47,368,553
JBrowse link
G Odad1 outer dynein arm docking complex subunit 1 part_of ISO
ISS
(PMID:23261303)
GO_REF:0000024
RGD
UniProt
PMID:23261303 GO_REF:0000024 NCBI chr 1:101,904,042...101,932,999
Ensembl chr 1:101,906,903...101,932,998
JBrowse link
outer dynein arm docking complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Odad4 outer dynein arm docking complex subunit 4 part_of ISO (PMID:27486780) RGD PMID:27486780 NCBI chr10:88,459,490...88,488,237
Ensembl chr10:88,459,490...88,488,237
JBrowse link
proximal portion of axoneme term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnah11 dynein, axonemal, heavy chain 11 located_in ISO (PMID:26909801)
(MGI:6120222|PMID:26909801)
RGD PMID:26909801 MGI:6120222 NCBI chr 6:145,784,893...146,099,212
Ensembl chr 6:145,785,275...146,099,053
JBrowse link
radial spoke term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfap206 cilia and flagella associated protein 206 part_of ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:50,148,685...50,193,580
Ensembl chr 5:50,148,658...50,193,571
JBrowse link
G Rsph6a radial spoke head 6 homolog A part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:79,959,555...79,979,217
Ensembl chr 1:79,959,591...79,979,205
JBrowse link
G Rsph9 radial spoke head component 9 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:17,224,589...17,245,093
Ensembl chr 9:17,225,122...17,245,093
JBrowse link
radial spoke head term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rsph4a radial spoke head component 4A part_of ISO MGI:5882201 (MGI:5882054|PMID:26506310) RGD PMID:26506310 MGI:5882054 NCBI chr20:32,450,701...32,467,362
Ensembl chr20:32,450,733...32,467,194
Ensembl chr20:32,450,733...32,467,194
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20137
    cellular anatomical entity 19837
      cytoplasm 11397
        cytoplasmic region 295
          plasma membrane bounded cell projection cytoplasm 241
            ciliary plasm + 133
            neuron projection cytoplasm + 108
Path 2
Term Annotations click to browse term
  cellular_component 20137
    cellular anatomical entity 19837
      intracellular anatomical structure 14407
        cytoplasm 11397
          cytoplasmic region 295
            plasma membrane bounded cell projection cytoplasm 241
              ciliary plasm + 133
              neuron projection cytoplasm + 108
paths to the root