Hip1r (huntingtin interacting protein 1 related) - Rat Genome Database

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Gene: Hip1r (huntingtin interacting protein 1 related) Mus musculus
Analyze
Symbol: Hip1r
Name: huntingtin interacting protein 1 related
RGD ID: 733373
MGI Page MGI
Description: Enables several functions, including SH3 domain binding activity; clathrin binding activity; and protein dimerization activity. Involved in several processes, including clathrin coat assembly; regulation of gastric acid secretion; and regulation of protein-containing complex assembly. Acts upstream of or within receptor-mediated endocytosis. Located in several cellular components, including apical plasma membrane; clathrin-coated pit; and perinuclear region of cytoplasm. Is expressed in several structures, including alimentary system; bone; central nervous system; genitourinary system; and sensory organ. Orthologous to human HIP1R (huntingtin interacting protein 1 related); INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine; 4-hydroxyphenyl retinamide.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: AA410023; HIP1-related protein; huntingtin-interacting protein 1-related protein; mKIAA0655
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395124,111,665 - 124,141,278 (+)NCBIGRCm39mm39
GRCm39 Ensembl5124,111,691 - 124,143,621 (+)Ensembl
GRCm385123,973,602 - 124,003,215 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5123,973,628 - 124,005,558 (+)EnsemblGRCm38mm10GRCm38
MGSCv375124,423,637 - 124,453,224 (+)NCBIGRCm37mm9NCBIm37
MGSCv365124,234,257 - 124,263,818 (+)NCBImm8
Celera5121,036,606 - 121,075,804 (+)NCBICelera
Cytogenetic Map5FNCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

References

Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10613908   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11564758   PMID:12477932   PMID:12650982   PMID:14742709   PMID:15090612   PMID:15121852  
PMID:15533940   PMID:15747579   PMID:16141072   PMID:16141073   PMID:16751776   PMID:17318189   PMID:17452370   PMID:18535670   PMID:18790740   PMID:19026994   PMID:19597149   PMID:20813912  
PMID:21267068   PMID:21677750   PMID:21725061   PMID:21873635   PMID:22525425   PMID:24194600   PMID:24712472   PMID:25122462   PMID:27626380   PMID:28378742   PMID:29449449   PMID:29459677  
PMID:29486577   PMID:29799838   PMID:30224518   PMID:32325033  


Genomics

Comparative Map Data
Hip1r
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395124,111,665 - 124,141,278 (+)NCBIGRCm39mm39
GRCm39 Ensembl5124,111,691 - 124,143,621 (+)Ensembl
GRCm385123,973,602 - 124,003,215 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5123,973,628 - 124,005,558 (+)EnsemblGRCm38mm10GRCm38
MGSCv375124,423,637 - 124,453,224 (+)NCBIGRCm37mm9NCBIm37
MGSCv365124,234,257 - 124,263,818 (+)NCBImm8
Celera5121,036,606 - 121,075,804 (+)NCBICelera
Cytogenetic Map5FNCBI
HIP1R
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl12122,834,453 - 122,862,961 (+)EnsemblGRCh38hg38GRCh38
GRCh3812122,834,498 - 122,862,961 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh3712123,319,295 - 123,347,508 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3612121,885,992 - 121,913,460 (+)NCBINCBI36hg18NCBI36
Cytogenetic Map12q24.31NCBI
HuRef12120,292,995 - 120,307,523 (+)NCBIHuRef
CHM1_112123,288,408 - 123,315,480 (+)NCBICHM1_1
Hip1r
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21232,590,164 - 32,618,841 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl1232,590,165 - 32,618,734 (-)Ensembl
Rnor_6.01238,024,517 - 38,053,184 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1238,024,519 - 38,053,085 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01239,895,504 - 39,924,082 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41233,714,225 - 33,742,792 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11233,577,648 - 33,606,180 (-)NCBI
Celera1234,277,732 - 34,306,331 (-)NCBICelera
Cytogenetic Map12q15NCBI
Hip1r
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554825,884,839 - 5,896,389 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554825,885,807 - 5,896,386 (-)NCBIChiLan1.0ChiLan1.0
HIP1R
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.112124,672,109 - 124,700,726 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl12124,685,091 - 124,700,726 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v012120,438,841 - 120,467,489 (+)NCBIMhudiblu_PPA_v0panPan3
HIP1R
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1266,623,583 - 6,639,107 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl266,624,791 - 6,637,659 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha266,785,375 - 6,813,922 (-)NCBI
ROS_Cfam_1.0266,872,729 - 6,901,296 (-)NCBI
UMICH_Zoey_3.1266,805,561 - 6,834,112 (-)NCBI
UNSW_CanFamBas_1.0266,898,281 - 6,926,838 (-)NCBI
UU_Cfam_GSD_1.0266,851,903 - 6,880,452 (-)NCBI
Hip1r
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118157,682,803 - 157,700,559 (+)NCBI
SpeTri2.0NW_0049365581,778,862 - 1,804,071 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HIP1R
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1429,993,655 - 30,024,216 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11429,996,388 - 30,024,343 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21431,685,234 - 31,713,135 (-)NCBISscrofa10.2Sscrofa10.2susScr3
HIP1R
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.111118,173,302 - 118,202,840 (+)NCBI
ChlSab1.1 Ensembl11118,173,544 - 118,202,985 (+)Ensembl
Vero_WHO_p1.0NW_023666037127,111,575 - 127,140,009 (-)NCBI
Hip1r
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474722,876,183 - 22,897,557 (+)NCBI

Position Markers
D5Mit160  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm385123,993,857 - 123,994,000UniSTSGRCm38
MGSCv375124,443,866 - 124,444,009UniSTSGRCm37
Celera5121,066,405 - 121,066,548UniSTS
Cytogenetic Map5FUniSTS
cM Map568.0UniSTS
Whitehead Genetic557.9UniSTS
Whitehead/MRC_RH51501.06UniSTS
RH124921  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm385124,003,032 - 124,003,179UniSTSGRCm38
MGSCv375124,453,041 - 124,453,188UniSTSGRCm37
Celera5121,075,621 - 121,075,768UniSTS
Cytogenetic Map5FUniSTS
RH125920  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm385124,002,949 - 124,003,198UniSTSGRCm38
MGSCv375124,452,958 - 124,453,207UniSTSGRCm37
Celera5121,075,538 - 121,075,787UniSTS
Cytogenetic Map5FUniSTS
Whitehead/MRC_RH51499.65UniSTS
RH126200  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm385123,982,112 - 123,982,317UniSTSGRCm38
MGSCv375124,432,121 - 124,432,326UniSTSGRCm37
Celera5121,054,642 - 121,054,847UniSTS
Cytogenetic Map5FUniSTS
Whitehead/MRC_RH51507.22UniSTS
AI661708  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm385123,968,643 - 123,968,741UniSTSGRCm38
MGSCv375124,418,652 - 124,418,750UniSTSGRCm37
Celera5121,041,158 - 121,041,256UniSTS
Cytogenetic Map5FUniSTS
Whitehead/MRC_RH51501.26UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11341716Rvfs3_mRift Valley fever susceptibility 3 (mouse)526236236138457140Mouse
4142064Tmc1m4_mTmc1 modifier 4 (mouse)Not determined554342835126924008Mouse
26884395Humsd2_mhumerus midshaft diameter 2, 10 week (mouse)569900000132500000Mouse
27226719Tibw6_mtibia width 6, proximal, 16 week (mouse)572700000140000000Mouse
13506928Recrq8_mrecombination rate in male meiosis QTL 8 (mouse)574300000132500000Mouse
25314315Mlh1fc4_mMLH1 foci count 4 (mouse)574300000132500000Mouse
1300968Skts4_mskin tumor susceptibility 4 (mouse)Not determined589271017124100176Mouse
1301362Prnr1_mprion resistance 1 (mouse)Not determined589271017146851125Mouse
11049562Lmr24f_mleishmaniasis resistance 24f (mouse)590173096124173175Mouse
1301457Cfsw2_mcystic fibrosis survival to weaning 2 (mouse)Not determined590413140124413285Mouse
1300993Hycdc_mhypercapnic duty cycle (mouse)Not determined590413140124413285Mouse
9587780Afw16_mabdominal fat weight QTL 16 (mouse)Not determined592682300126682419Mouse
1301974Chab7_mcholesterol absorption 7 (mouse)Not determined595085348129085464Mouse
1357644Egrd1_mearly growth rate, direct effect 1 (mouse)Not determined595286714129286920Mouse
1558774Lith17_mlithogenic gene 17 (mouse)Not determined595317683129317856Mouse
10402486Dipa1_mdrug induced psychomotor activation 1 (mouse)Not determined595317683129317856Mouse
13464244Ahl19_mage related hearing loss, early onset 19 (mouse)595317683129317856Mouse
1300940Actd3_mactivity-distance traveled 3 (mouse)Not determined596172519130172667Mouse
1300659Pcd8ts1_mp-glycoprotein positive CD8 T cell subset 1 (mouse)Not determined596883692130883925Mouse
1301858Smdq1_msegregation of mitochondrial DNA QTL 1 (mouse)Not determined596883692130883925Mouse
4141519Hmtb5_mhemostasis and thrombosis bleeding time 5 (mouse)Not determined99801563126805880Mouse
12904945Tammq2_mtibialis anterior muscle mass QTL 2 (mouse)5100527900134527900Mouse
12904959Smmq1_msoleus muscle mass QTL 1 (mouse)5100527900134527900Mouse
12859290Criq2_mCitrobacter rodentium infection QTL 2 (mouse)5101194514135194514Mouse
1301624Aevm2_mautoimmune extremity vasculitis in MRL mice 2 (mouse)Not determined5101725767135725963Mouse
14746986Manh58_mmandible shape 58 (mouse)5102308218136308218Mouse
11532736Sluc33b_msusceptibility to lung cancer 33b (mouse)5102806972136807131Mouse
10412202Bbaa26_mB.burgdorferi-associated arthritis 26 (mouse)Not determined5104435822138557193Mouse
10412239Alpq7_malcohol preference QTL 7 (mouse)Not determined5104567876138567876Mouse
4142473Chlq11_mcirculating hormone level QTL 11 (mouse)Not determined5107829235141829348Mouse
10043890Trigq4_mtriglyceride QTL 4 (mouse)Not determined5107829235141829348Mouse
13464243Ahl20_mage related hearing loss, early onset 20 (mouse)5107829235141829348Mouse
4141139Hmtb4_mhemostasis and thrombosis rebleeding time 4 (mouse)Not determined108614643126805880Mouse
10412197Bbaa25_mB.burgdorferi-associated arthritis 25 (mouse)Not determined5109090176143090317Mouse
13464251Ahl21_mage related hearing loss, early onset 21 (mouse)5109090176143090317Mouse
1301543Hypch_mhypercholesterolemia (mouse)Not determined5109090758139133150Mouse
1300913Bwefm_mbody weight females and males day 10 (mouse)Not determined5109362284143362395Mouse
1301102Cia14_mcollagen induced arthritis 14 (mouse)Not determined5113172519138557193Mouse
1357662Lprq4_mlipoprotein QTL 4 (mouse)Not determined5113883692129555542Mouse
1300827Cora1_mcorrelation in cytokine production 1 (mouse)Not determined5115128044149128176Mouse
1301226Bbaa2_mB.burgdorferi-associated arthritis 2 (mouse)Not determined5115128044149128176Mouse
1301857Bglq14_mbody growth late QTL 14 (mouse)Not determined5118920110151834684Mouse
10412191Bbaa24_mB.burgdorferi-associated arthritis 24 (mouse)Not determined5119806972141714711Mouse
4141081Nidd7k_mNidd7 on KK-A (mouse)Not determined119806972149423861Mouse
11528552Scram1_mspinal cord resistance to astrocytoma modifier 1 (mouse)5121457140151834684Mouse
1301986Bpq4_mblood pressure QTL 4 (mouse)Not determined5121556974151834684Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1367
Count of miRNA genes:608
Interacting mature miRNAs:747
Transcripts:ENSMUST00000000939, ENSMUST00000166258, ENSMUST00000166684, ENSMUST00000167325, ENSMUST00000167879, ENSMUST00000171407
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_145070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530369 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530370 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004942524 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_387567 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_387568 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC122753 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF221713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK014542 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK077417 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK129182 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK146663 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK163156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC036288 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC049938 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC062914 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC065101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BP763532 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466529 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ082429 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ549663 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000000939   ⟹   ENSMUSP00000000939
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5124,111,691 - 124,143,621 (+)Ensembl
GRCm38.p6 Ensembl5123,973,628 - 124,005,558 (+)Ensembl
RefSeq Acc Id: ENSMUST00000166258   ⟹   ENSMUSP00000130766
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5124,132,868 - 124,135,462 (+)Ensembl
GRCm38.p6 Ensembl5123,994,805 - 123,997,399 (+)Ensembl
RefSeq Acc Id: ENSMUST00000166684
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5124,138,662 - 124,139,737 (+)Ensembl
GRCm38.p6 Ensembl5124,000,599 - 124,001,674 (+)Ensembl
RefSeq Acc Id: ENSMUST00000167325
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5124,138,446 - 124,139,751 (+)Ensembl
GRCm38.p6 Ensembl5124,000,383 - 124,001,688 (+)Ensembl
RefSeq Acc Id: ENSMUST00000167879   ⟹   ENSMUSP00000127361
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5124,118,317 - 124,128,047 (+)Ensembl
GRCm38.p6 Ensembl5123,980,254 - 123,989,984 (+)Ensembl
RefSeq Acc Id: ENSMUST00000171407
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5124,137,473 - 124,139,070 (+)Ensembl
GRCm38.p6 Ensembl5123,999,410 - 124,001,007 (+)Ensembl
RefSeq Acc Id: ENSMUST00000198664   ⟹   ENSMUSP00000143309
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5124,137,849 - 124,139,725 (+)Ensembl
GRCm38.p6 Ensembl5123,999,786 - 124,001,662 (+)Ensembl
RefSeq Acc Id: NM_145070   ⟹   NP_659507
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395124,111,691 - 124,141,278 (+)NCBI
GRCm385123,973,628 - 124,003,215 (+)NCBI
MGSCv375124,423,637 - 124,453,224 (+)RGD
Celera5121,036,606 - 121,075,804 (+)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006530369   ⟹   XP_006530432
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395124,111,665 - 124,139,498 (+)NCBI
GRCm385123,973,602 - 124,001,435 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530370   ⟹   XP_006530433
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395124,111,665 - 124,139,498 (+)NCBI
GRCm385123,973,602 - 124,001,435 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004942524
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395124,111,665 - 124,141,263 (+)NCBI
RefSeq Acc Id: XR_387567
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395124,111,665 - 124,141,263 (+)NCBI
GRCm385123,973,602 - 124,003,200 (+)NCBI
Sequence:
RefSeq Acc Id: XR_387568
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395124,111,665 - 124,141,263 (+)NCBI
GRCm385123,973,602 - 124,003,200 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_659507   ⟸   NM_145070
- UniProtKB: Q9JKY5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006530432   ⟸   XM_006530369
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006530433   ⟸   XM_006530370
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: ENSMUSP00000143309   ⟸   ENSMUST00000198664
RefSeq Acc Id: ENSMUSP00000000939   ⟸   ENSMUST00000000939
RefSeq Acc Id: ENSMUSP00000130766   ⟸   ENSMUST00000166258
RefSeq Acc Id: ENSMUSP00000127361   ⟸   ENSMUST00000167879
Protein Domains
ANTH   ENTH   I/LWEQ

Promoters
RGD ID:6888060
Promoter ID:EPDNEW_M7481
Type:initiation region
Name:Hip1r_1
Description:Mus musculus huntingtin interacting protein 1 related , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm385123,973,724 - 123,973,784EPDNEW
RGD ID:6837699
Promoter ID:MM_KWN:44061
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   3T3L1_Day3,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   ES_Cell,   Liver,   Lung
Transcripts:NM_145070
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv365124,423,474 - 124,423,974 (+)MPROMDB
RGD ID:6847920
Promoter ID:MM_ACW:39462
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Kidney,   Lung
Transcripts:HIP1R.BSEP07,   HIP1R.CSEP07,   HIP1R.ESEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv365124,448,951 - 124,450,362 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1352504 AgrOrtholog
Ensembl Genes ENSMUSG00000000915 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000000939 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000127361 UniProtKB/TrEMBL
  ENSMUSP00000130766 UniProtKB/TrEMBL
  ENSMUSP00000143309 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000000939 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000166258 UniProtKB/TrEMBL
  ENSMUST00000167879 UniProtKB/TrEMBL
  ENSMUST00000198664 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.90 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro ANTH_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENTH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENTH_VHS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HIP1_clath-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HIP1R UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  I/LWEQ_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ILWEQ_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Sla2_fam UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:29816 UniProtKB/Swiss-Prot
MGD MGI:1352504 ENTREZGENE
NCBI Gene 29816 ENTREZGENE
PANTHER PTHR10407 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR10407:SF10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam ANTH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HIP1_clath_bdg UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  I_LWEQ UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Hip1r PhenoGen
PROSITE ENTH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  I_LWEQ UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART ENTH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ILWEQ UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF109885 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF48464 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0G2JFU3_MOUSE UniProtKB/TrEMBL
  E9Q3C5_MOUSE UniProtKB/TrEMBL
  F7DCR9_MOUSE UniProtKB/TrEMBL
  HIP1R_MOUSE UniProtKB/Swiss-Prot
  Q6P1F5_MOUSE UniProtKB/TrEMBL
  Q6ZQ77_MOUSE UniProtKB/TrEMBL
  Q80UP1_MOUSE UniProtKB/TrEMBL
  Q8BPA2_MOUSE UniProtKB/TrEMBL
  Q9D689_MOUSE UniProtKB/TrEMBL
  Q9JKY5 ENTREZGENE
UniProt Secondary Q3UJ14 UniProtKB/Swiss-Prot