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Gene: Strada (STE20 related adaptor alpha) Rattus norvegicus

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Symbol:

Strada

Name:

STE20 related adaptor alpha

RGD ID:

727905

Description:

Contributes to protein serine/threonine kinase activity. Involved in activation of protein kinase activity. Part of protein-containing complex. Human ortholog(s) of this gene implicated in polyhydramnios, megalencephaly, and symptomatic epilepsy. Orthologous to human STRADA (STE20 related adaptor alpha); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; mTOR signaling pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

Lyk5; MGC93856; protein kinase LYK5; STE20-related adapter protein; STE20-related kinase adapter protein alpha; STE20-related kinase adaptor alpha; STRAD alpha

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	STRADA (STE20 related adaptor alpha)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL
Mus musculus (house mouse):	Strada (STE20-related kinase adaptor alpha)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Strada (STE20 related adaptor alpha)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	STRADA (STE20 related adaptor alpha)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	STRADA (STE20 related adaptor alpha)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Strada (STE20 related adaptor alpha)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	STRADA (STE20 related adaptor alpha)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	STRADA (STE20 related adaptor alpha)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Strada (STE20 related adaptor alpha)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Strada (STE20 related adaptor alpha)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	NIT2 (nitrilase family member 2)	HGNC	OMA
Alliance orthologs ³
Mus musculus (house mouse):	Strada (STE20-related kinase adaptor alpha)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	STRADA (STE20 related adaptor alpha)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	strada (STE20 related adaptor alpha)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Stlk	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	strd-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	strada	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	strada	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	91,594,648 - 91,623,710 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	10	91,594,419 - 91,623,691 (-)	Ensembl				GRCr8
mRatBN7.2	10	91,094,849 - 91,123,890 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	91,094,687 - 91,123,830 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	10	96,149,477 - 96,178,478 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	95,612,647 - 95,641,646 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	91,023,409 - 91,052,378 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	94,355,369 - 94,384,404 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	94,355,384 - 94,384,339 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	10	94,104,039 - 94,133,334 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	10	95,557,836 - 95,586,792 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	10	89,770,859 - 89,799,791 (-)	NCBI		Celera
RGSC_v3.1	10	95,572,205 - 95,601,162 (-)	NCBI
Cytogenetic Map	10	q32.1	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

benign epilepsy with centrotemporal spikes (ISO)

epilepsy (ISO)

genetic disease (ISO)

medulloblastoma (ISO)

polyhydramnios, megalencephaly, and symptomatic epilepsy (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

(1->4)-beta-D-glucan (ISO)

1,2-dimethylhydrazine (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dinitrotoluene (EXP)

2-methylcholine (ISO)

3,4-methylenedioxymethamphetamine (ISO)

6-propyl-2-thiouracil (EXP)

acrolein (ISO)

afimoxifene (ISO)

alpha-pinene (ISO)

amitrole (EXP)

antirheumatic drug (ISO)

benzo[a]pyrene (ISO)

beta-lapachone (ISO)

bisphenol A (EXP)

bisphenol F (ISO)

butanal (ISO)

cadmium atom (ISO)

cadmium dichloride (EXP,ISO)

cannabidiol (ISO)

chlorpyrifos (ISO)

cisplatin (ISO)

clofibrate (ISO)

coumestrol (ISO)

Dibutyl phosphate (ISO)

dibutyl phthalate (EXP,ISO)

diuron (EXP)

ethyl methanesulfonate (ISO)

fenvalerate (EXP)

folic acid (ISO)

genistein (ISO)

gentamycin (EXP)

GSK-J4 (ISO)

methamphetamine (EXP)

methotrexate (ISO)

methyl methanesulfonate (ISO)

N-nitrosodiethylamine (EXP)

ozone (ISO)

paracetamol (EXP,ISO)

perfluorooctane-1-sulfonic acid (ISO)

pirinixic acid (ISO)

potassium chromate (ISO)

Soman (EXP)

sulfadimethoxine (EXP)

sunitinib (ISO)

titanium dioxide (ISO)

triptonide (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

activation of protein kinase activity (IDA,ISO)

G1 to G0 transition (ISO)

protein export from nucleus (IBA,IEA,ISO,ISS)

protein phosphorylation (ISO)

Cellular Component

cytoplasm (IEA,ISO,ISS)

cytosol (IEA,ISO)

intracellular protein-containing complex (IEA,ISO)

nucleoplasm (IEA,ISO)

nucleus (IEA,ISO,ISS)

protein-containing complex (IDA,IEA)

serine/threonine protein kinase complex (IBA)

Molecular Function

ATP binding (IEA)

kinase binding (IEA,ISO)

protein binding (ISO)

protein kinase activator activity (IEA,ISO,ISS)

protein kinase activity (IEA,ISO)

protein serine/threonine kinase activator activity (IBA,IEA,ISO)

protein serine/threonine kinase activity (IMP)

protein-containing complex binding (IDA)

Molecular Pathway Annotations Click to see Annotation Detail View

adenosine monophosphate-activated protein kinase (AMPK) signaling pathway (IDA,TAS)

mTOR signaling pathway (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Activation of the tumour suppressor kinase LKB1 by the STE20-like pseudokinase STRAD.	Baas AF, etal., EMBO J 2003 Jun 16;22(12):3062-72.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	The AMP-activated protein kinase pathway--new players upstream and downstream.	Hardie DG J Cell Sci. 2004 Nov 1;117(Pt 23):5479-87.
4.	Complexes between the LKB1 tumor suppressor, STRAD alpha/beta and MO25 alpha/beta are upstream kinases in the AMP-activated protein kinase cascade.	Hawley SA, etal., J Biol. 2003;2(4):28. Epub 2003 Sep 24.
5.	NCBI rat LocusLink and RefSeq merged data October 15, 2003	NCBI rat LocusLink and RefSeq merged data October 15, 2003
6.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
7.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
8.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
10.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.

Additional References at PubMed

PMID:15489334	PMID:17482549	PMID:18687677	PMID:18854309	PMID:19892943

Genomics

Comparative Map Data

Strada
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	91,594,648 - 91,623,710 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	10	91,594,419 - 91,623,691 (-)	Ensembl				GRCr8
mRatBN7.2	10	91,094,849 - 91,123,890 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	91,094,687 - 91,123,830 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	10	96,149,477 - 96,178,478 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	95,612,647 - 95,641,646 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	91,023,409 - 91,052,378 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	94,355,369 - 94,384,404 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	94,355,384 - 94,384,339 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	10	94,104,039 - 94,133,334 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	10	95,557,836 - 95,586,792 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	10	89,770,859 - 89,799,791 (-)	NCBI		Celera
RGSC_v3.1	10	95,572,205 - 95,601,162 (-)	NCBI
Cytogenetic Map	10	q32.1	NCBI

STRADA
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	63,702,832 - 63,741,986 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	63,682,336 - 63,741,986 (-)	Ensembl			hg38	GRCh38
GRCh37	17	61,780,192 - 61,819,346 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	59,133,927 - 59,172,947 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	17	56,168,312 - 56,207,450 (-)	NCBI		Celera
Cytogenetic Map	17	q23.3	NCBI
HuRef	17	57,148,274 - 57,187,415 (-)	NCBI		HuRef
CHM1_1	17	61,844,604 - 61,883,729 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	17	64,573,741 - 64,612,901 (-)	NCBI		T2T-CHM13v2.0

Strada
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	106,053,739 - 106,084,460 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	106,054,156 - 106,092,994 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	11	106,162,974 - 106,193,634 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	106,163,330 - 106,202,168 (-)	Ensembl			mm10	GRCm38
MGSCv37	11	106,024,650 - 106,054,862 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	11	105,979,426 - 106,009,638 (-)	NCBI		MGSCv36	mm8
Celera	11	117,893,554 - 117,923,982 (-)	NCBI		Celera
Cytogenetic Map	11	E1	NCBI
cM Map	11	68.89	NCBI

Strada
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955478	8,082,075 - 8,116,543 (+)	Ensembl
ChiLan1.0	NW_004955478	8,082,075 - 8,116,320 (+)	NCBI	ChiLan1.0	ChiLan1.0

STRADA
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	79,875,018 - 79,914,472 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	84,692,466 - 84,732,320 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	57,783,114 - 57,822,056 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	62,929,065 - 62,967,021 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	62,929,065 - 62,967,021 (-)	Ensembl			panPan2	panpan1.1

STRADA
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	11,684,905 - 11,712,515 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	11,684,663 - 11,712,432 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	12,644,872 - 12,672,483 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	13,345,671 - 13,373,462 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	13,344,809 - 13,373,416 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	12,292,740 - 12,320,302 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	15,211,662 - 15,239,452 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	15,214,249 - 15,242,300 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Strada
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	14,809,020 - 14,842,196 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936541	4,349,878 - 4,385,596 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936541	4,352,613 - 4,385,499 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

STRADA
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	15,191,782 - 15,223,558 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	12	15,191,793 - 15,222,709 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	15,181,660 - 15,210,365 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

STRADA
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	57,550,698 - 57,587,995 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	16	57,550,703 - 57,588,084 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666077	28,159,755 - 28,199,016 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Strada
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624849	1,192,606 - 1,231,224 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624849	1,192,714 - 1,231,001 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Strada
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	9	72,926,974 - 72,955,347 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Strada
202 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	479
Count of miRNA genes:	218
Interacting mature miRNAs:	268
Transcripts:	ENSRNOT00000011894, ENSRNOT00000055125
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1549846	Scl47	Serum cholesterol level QTL 47	3.6		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	10	51071897	96071897	Rat
1298069	Bp168	Blood pressure QTL 168	5.5		blood pressure trait (VT:0000183)	systolic blood pressure (CMO:0000004)	10	27023535	98502431	Rat
8657410	Bp374	Blood pressure QTL 374			heart left ventricle size trait (VT:0002753)	heart left ventricle end-diastolic diameter (CMO:0000982)	10	67476608	107713808	Rat
61449	Ciaa2	CIA Autoantibody QTL 2	7.1		blood autoantibody amount (VT:0003725)	calculated serum anti-type 2 collagen antibody titer (CMO:0001279)	10	63719161	107713808	Rat
631555	Bp134	Blood pressure QTL 134		0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	81012077	91729860	Rat
61325	Aia5	Adjuvant induced arthritis QTL 5		0.01	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	23948641	107713808	Rat
1298078	Stresp5	Stress response QTL 5	2.99	0.00025	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	10	42546145	107713808	Rat
1549831	Bss6	Bone structure and strength QTL 6	4		lumbar vertebra strength trait (VT:0010574)	vertebra ultimate force (CMO:0001678)	10	58073360	103073360	Rat
12903252	Cm113	Cardiac mass QTL 113		0.047	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	10	66817119	107713808	Rat
1579915	Bp280	Blood pressure QTL 280		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	90904245	95604677	Rat
70164	Bw21	Body weight QTL 21	4.36	0.00005	body mass (VT:0001259)	body weight (CMO:0000012)	10	54296336	99451733	Rat
4889948	Bss91	Bone structure and strength QTL 91	4		tibia area (VT:1000281)	tibia midshaft total cross-sectional area (CMO:0001715)	10	83061236	92869129	Rat
1579919	Bp281	Blood pressure QTL 281		0.01	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	50464802	95464802	Rat
2298548	Neuinf7	Neuroinflammation QTL 7	3.4		nervous system integrity trait (VT:0010566)	spinal cord RT1-B protein level (CMO:0002132)	10	64939013	107713808	Rat
1302404	Cia27	Collagen induced arthritis QTL 27	2.6	0.0045	joint integrity trait (VT:0010548)	experimental arthritis severity measurement (CMO:0001459)	10	76951790	107713808	Rat
1300107	Rf18	Renal function QTL 18	3.41		urine output (VT:0003620)	timed urine volume (CMO:0000260)	10	79272424	102982300	Rat
2300218	Hpcl2	Hepatic cholesterol level QTL 2			liver cholesterol amount (VT:0010498)	liver cholesterol level (CMO:0001597)	10	45529164	96099749	Rat
70168	Eae12	Experimental allergic encephalomyelitis QTL 12		0.0009	nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)	10	73599825	107713808	Rat
70171	Cari1	Carrageenan-induced inflammation QTL 1	4.9	0.0005	hypodermis integrity trait (VT:0010550)	inflammatory exudate volume (CMO:0001429)	10	54296227	107713808	Rat
10450495	Bp383	Blood pressure QTL 383		0.002	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	76743133	95464802	Rat
12903269	Am15	Aortic mass QTL 15		0.042	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	10	66817119	107713808	Rat
10450493	Bp382	Blood pressure QTL 382		0.002	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	50860288	95860288	Rat
2313856	Bp342	Blood pressure QTL 342	4.4	0.0001	life span trait (VT:0005372)	age at time of death (CMO:0001193)	10	87807758	96620484	Rat
12903266	Cm114	Cardiac mass QTL 114		0.02	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	10	66817119	107713808	Rat
61354	Pia10	Pristane induced arthritis QTL 10		0.01	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	23948641	107713808	Rat
2292617	Ept18	Estrogen-induced pituitary tumorigenesis QTL 18	3.9		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	10	73950353	96620293	Rat
2313103	Bss80	Bone structure and strength QTL 80	2	0.0001	tibia strength trait (VT:1000284)	tibia midshaft endosteal cross-sectional area (CMO:0001716)	10	62556066	107556066	Rat
12880372	Am12	Aortic mass QTL 12		0.003	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	10	66817119	107713808	Rat
70193	Mcs7	Mammary carcinoma susceptibility QTL 7	2.38		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	10	72724423	107713808	Rat
2313105	Bss79	Bone structure and strength QTL 79	1.8	0.0001	tibia size trait (VT:0100001)	tibia midshaft cross-sectional area (CMO:0001717)	10	62556066	107556066	Rat
12880375	Kidm66	Kidney mass QTL 66		0.009	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	10	66817119	107713808	Rat
61363	Oia3	Oil induced arthritis QTL 3		0.001	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	87807758	107713808	Rat
1357344	Bp249	Blood pressure QTL 249		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	67241334	98502431	Rat
2316949	Gluco60	Glucose level QTL 60	3.7		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	10	14991535	107556066	Rat
12880370	Cm105	Cardiac mass QTL 105		0.008	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	10	66817119	107713808	Rat
12880371	Cm106	Cardiac mass QTL 106		0.007	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	10	66817119	107713808	Rat
2306970	Anxrr22	Anxiety related response QTL 22	5.95		fear/anxiety-related behavior trait (VT:1000241)	number of periods of voluntary immobility (CMO:0001045)	10	61843496	98710773	Rat
724530	Bp149	Blood pressure QTL 149		0.0001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	91127270	95604677	Rat
1300137	Bp186	Blood pressure QTL 186	3.57		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	10	91127270	107556066	Rat
11565453	Kidm58	Kidney mass QTL 58		0.002	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	10	66817119	107713808	Rat
1359017	Hrtrt21	Heart rate QTL 21	2.4		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	10	73695339	97272278	Rat
7387312	Bw125	Body weight QTL 125	3	0.0047	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight (CMO:0000356)	10	65390777	107713808	Rat
6893357	Bw102	Body weight QTL 102	0.5	0.36	body mass (VT:0001259)	body weight (CMO:0000012)	10	81012077	101828297	Rat
12880384	Cm107	Cardiac mass QTL 107		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)		90904245	95604677	Rat
12880385	Cm108	Cardiac mass QTL 108		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)		90904245	95604677	Rat
12880396	Am13	Aortic mass QTL 13		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	10	90904245	95604677	Rat
2306793	Ean5	Experimental allergic neuritis QTL 5	4.7		nervous system integrity trait (VT:0010566)	IFNG-secreting splenocyte count (CMO:0002122)	10	73049656	94495280	Rat
12880398	Kidm67	Kidney mass QTL 67		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	10	90904245	95604677	Rat
2306792	Ean4	Experimental allergic neuritis QTL 4	4		nervous system integrity trait (VT:0010566)	IFNG-secreting splenocyte count (CMO:0002122)	10	49495492	94495492	Rat
61387	Bp1	Blood pressure QTL 1	5.1		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	10	52269185	107713808	Rat
12880395	Cm109	Cardiac mass QTL 109		0.001	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	10	90904245	95604677	Rat
61396	Bp9	Blood pressure QTL 9	4.8	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	68920187	107713808	Rat
1358915	Stresp7	Stress response QTL 7	3.52		blood norepinephrine amount (VT:0005663)	plasma norepinephrine level (CMO:0001010)	10	65307813	107713808	Rat
634320	Niddm49	Non-insulin dependent diabetes mellitus QTL 49	4.41		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	10	89039175	107713808	Rat
70363	Bp71	Blood pressure QTL 71		0.04	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	61843496	106843496	Rat
70364	Bp72	Blood pressure QTL 72			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	88900501	96620484	Rat
6893366	Bw106	Body weight QTL 106	0.3	0.47	body mass (VT:0001259)	body weight (CMO:0000012)	10	70698731	107713808	Rat
631530	Tls3	T-lymphoma susceptibility QTL 3	0	0.0001	thymus integrity trait (VT:0010555)	percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911)	10	27587226	96099902	Rat
1354608	Cm33	Cardiac mass QTL 33	2.8		heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	10	55307972	93608131	Rat
1558643	Cm44	Cardiac mass QTL 44	4.8	0.0000368	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	10	61843496	100198886	Rat
631267	Cia20	Collagen induced arthritis QTL 20	3.2		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	23948641	107713808	Rat
631269	Cia22	Collagen induced arthritis QTL 22	8.9		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	40535708	107713808	Rat
1576308	Schws1	Schwannoma susceptibility QTL 1		0.0041	nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	10	40535708	107713808	Rat
631268	Cia21	Collagen induced arthritis QTL 21	3.1		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	14991535	107713808	Rat
7207811	Bmd90	Bone mineral density QTL 90	5.2		femur size trait (VT:1000369)	femoral neck cross-sectional area (CMO:0001697)	10	49943710	94943710	Rat
631270	Cia23	Collagen induced arthritis QTL 23	3.9		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	40535708	107713808	Rat
1581559	Eae18	Experimental allergic encephalomyelitis QTL 18		0.00002	nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis severity score (CMO:0001419)	10	66108888	107555881	Rat
6893336	Cm75	Cardiac mass QTL 75	0.1	0.87	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	10	61843496	100198886	Rat
631547	Bp87	Blood pressure QTL 87	4.5		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	47869129	92869129	Rat
61427	Cia16	Collagen induced arthritis QTL 16	3.2		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	6864618	96620484	Rat
12880055	Am11	Aortic mass QTL 11		0.004	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	10	84503487	96432422	Rat
2292438	Bp311	Blood pressure QTL 311			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	76743133	95604677	Rat
2301398	Kidm38	Kidney mass QTL 38		0.002	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	10	84503487	96432422	Rat
2292436	Bp310	Blood pressure QTL 310			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	50604677	95604677	Rat
1600367	Mcs15	Mammary carcinoma susceptibility QTL 15	4.5		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	10	72724423	107713808	Rat
1358188	Ept9	Estrogen-induced pituitary tumorigenesis QTL 9	3.9		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	10	73950353	96620293	Rat
631537	Oia4	Oil induced arthritis QTL 4			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	76128947	107713808	Rat
634354	Rends3	Renal damage susceptibility QTL 3		0.05	kidney blood vessel morphology trait (VT:0000530)	organ lesion measurement (CMO:0000677)	10	61997479	106997479	Rat
2301405	Cm69	Cardiac mass QTL 69		0.031	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	10	66817119	107713808	Rat
631542	Bp82	Blood pressure QTL 82	6.8		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	27023535	99451848	Rat

Markers in Region

D10Chm161

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	91,106,483 - 91,106,633 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	94,367,003 - 94,367,152	NCBI	Rnor6.0
Rnor_5.0	10	94,115,674 - 94,115,823	UniSTS	Rnor5.0
RGSC_v3.4	10	95,569,456 - 95,569,605	UniSTS	RGSC3.4
Celera	10	89,782,455 - 89,782,604	UniSTS
Cytogenetic Map	10	q32.1	UniSTS

BI278319

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	91,094,903 - 91,095,053 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	94,355,424 - 94,355,573	NCBI	Rnor6.0
Rnor_5.0	10	94,104,094 - 94,104,243	UniSTS	Rnor5.0
RGSC_v3.4	10	95,557,876 - 95,558,025	UniSTS	RGSC3.4
Celera	10	89,770,899 - 89,771,048	UniSTS
RH 3.4 Map	10	976.1	UniSTS
Cytogenetic Map	10	q32.1	UniSTS

BI295468

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	91,108,203 - 91,108,390 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	94,368,723 - 94,368,909	NCBI	Rnor6.0
Rnor_5.0	10	94,117,394 - 94,117,580	UniSTS	Rnor5.0
RGSC_v3.4	10	95,571,176 - 95,571,362	UniSTS	RGSC3.4
Celera	10	89,784,175 - 89,784,361	UniSTS
RH 3.4 Map	10	979.6	UniSTS
Cytogenetic Map	10	q32.1	UniSTS

RH139256

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	91,112,012 - 91,112,160 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	94,372,532 - 94,372,679	NCBI	Rnor6.0
Rnor_5.0	10	94,121,203 - 94,121,350	UniSTS	Rnor5.0
RGSC_v3.4	10	95,574,985 - 95,575,132	UniSTS	RGSC3.4
Celera	10	89,787,984 - 89,788,131	UniSTS
Cytogenetic Map	10	q32.1	UniSTS

RH142091

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	91,109,465 - 91,109,645 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	94,369,985 - 94,370,164	NCBI	Rnor6.0
Rnor_5.0	10	94,118,656 - 94,118,835	UniSTS	Rnor5.0
RGSC_v3.4	10	95,572,438 - 95,572,617	UniSTS	RGSC3.4
Celera	10	89,785,437 - 89,785,616	UniSTS
RH 3.4 Map	10	979.3	UniSTS
Cytogenetic Map	10	q32.1	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	162	91	90	59	92	59	6	356	192	11	141	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001415111	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001415112	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001415113	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_182820	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006247586	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008768359	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008768360	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008768361	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008768362	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008768364	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039086166	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039086167	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269202	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269203	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269204	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269205	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269206	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269207	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC133055	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY327409	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC081911	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473948	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000011894 ⟹ ENSRNOP00000011894

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	10	91,094,687 - 91,104,530 (-)	Ensembl
Rnor_6.0 Ensembl	10	94,356,091 - 94,365,049 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000055125 ⟹ ENSRNOP00000051998

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	91,594,648 - 91,623,691 (-)	Ensembl
mRatBN7.2 Ensembl	10	91,094,687 - 91,123,795 (-)	Ensembl
Rnor_6.0 Ensembl	10	94,355,384 - 94,384,339 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000094696 ⟹ ENSRNOP00000094426

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	91,594,419 - 91,623,643 (-)	Ensembl
mRatBN7.2 Ensembl	10	91,094,687 - 91,123,830 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000095594 ⟹ ENSRNOP00000083872

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	10	91,094,687 - 91,123,830 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000119526 ⟹ ENSRNOP00000081722

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	91,594,648 - 91,604,546 (-)	Ensembl
mRatBN7.2 Ensembl	10	91,094,687 - 91,104,747 (-)	Ensembl

RefSeq Acc Id:

NM_001415111 ⟹ NP_001402040

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	91,594,648 - 91,623,643 (-)	NCBI
mRatBN7.2	10	91,094,849 - 91,123,845 (-)	NCBI

RefSeq Acc Id:

NM_001415112 ⟹ NP_001402041

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	91,594,648 - 91,623,643 (-)	NCBI
mRatBN7.2	10	91,094,849 - 91,123,845 (-)	NCBI

RefSeq Acc Id:

NM_001415113 ⟹ NP_001402042

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	91,594,648 - 91,623,643 (-)	NCBI
mRatBN7.2	10	91,094,849 - 91,123,845 (-)	NCBI

RefSeq Acc Id:

NM_182820 ⟹ NP_877972

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	91,594,648 - 91,623,643 (-)	NCBI
mRatBN7.2	10	91,094,849 - 91,123,845 (-)	NCBI
Rnor_6.0	10	94,355,384 - 94,384,339 (-)	NCBI
Rnor_5.0	10	94,104,039 - 94,133,334 (-)	NCBI
RGSC_v3.4	10	95,557,836 - 95,586,792 (-)	RGD
Celera	10	89,770,859 - 89,799,791 (-)	RGD

Sequence:

show sequence

ACCGGCCTGGCGGCAGCGCGGCCACAAAACTGAGGAGGCGGAGCCGAGACGGAGTCGGTACTGC
GCTCTGACTCCTAGACCAGGTTTAAGTTTTTGAAGTTGAAGTAGGTCTACACAGTAGGAACCCA
TGTCTTTTCTTGCCAATGAGGCGAGCTCAGAGTCCATAGCATCCTTCTCCAAACCAGAGATCAT
GAGTAGCTTTCTGCCAGAGGGCGGGTGTTACGAGCTGCTCTCCGTCATAGGCAAAGGGTTTGAG
GACTTGATGACAGTGAATTCCAGGTACAAACCAACAGGAGAGTATGTGACAGTACGAAGGATCA
ACCTAGAAGCTTGTTCCAATGAGATGGTGACGTTCTTGCAGGGGGAGCTTCATGTCTCTAAACT
CTTCAGCCATCCCAATATCGTGCCGTATCGAGCCACCTTCATCGCAGACAACGAGCTGTGGGCC
GTCACATCATTCATGGCGTACGGTTCTGCAAAGGATCTCATTGGCACACACTTCATGGACGGCA
TGAGTGAACTGGCGATTGCGTACATCCTGCAGGGGGTGCTAAAGGCCTTAGACTACATCCATCA
CATGGGCTATGTGCACAGGAGTGTCAAGGCCAGCCACATTCTGATCTCCACGGATGGGAAGGTC
TACCTGTCTGGCTTACGCAGCAACCTTAGCATGATCAGTCATGGACAACGGCAGCGTGCGGTCC
ATGATTTCCCCAAATATAGCATCAAGGTCCTGCCTTGGCTCAGCCCAGAAGTCCTCCAGCAGAA
TCTTCAGGGTTATGACGCCAAGTCTGATATCTACAGTGTGGGAATCACAGCGTGCGAACTAGCC
AATGGCCATGTCCCCTTCAAAGACATGCCTGCTACTCAGATGCTGCTAGAGAAACTTAATGGCA
CCGTGCCCTGCCTGCTGGACACCAGCACCATCCCTGCTGAGGAGCTGACCATGAGTCCCTCCCG
CTCCATTGCCAACCCTGGCCTGAATGACAGCCTGGCCGCTGGTAGCCTCCGGCCTGCCAATGGT
GACTCCCCTTCCCACCCCTACCACCGAACCTTCTCACCCCATTTCCACAACTTTGTGGAGCAGT
GCCTTCAGCGCAACCCTGATGCAAGGCCAAACGCCAGCACCCTCCTGAACCACTCCTTCTTCAA
GCAGATCAAGCGACGTGCTTCCGAGGCTTTACCTGAGTTGCTCCGCCCAGTCACTCCCATCACC
AGCTTCGAGGGCAGCCAGTCTCAGGATCATAGTGGAATCTTAGGCCTGGTGACAAACCTGGAAG
ACCTGGAGGTGGATGACTGGGAGTTCTGAATCTCTGCCGCCTGCACCCTCCAGCTGGGGTGGGG
TGTGAGCCCAGGGCCTTCTTGAGGACCAGCATCTGCCTCTGGCTGCAGGCTGGGTTCAAAGGAC
ATTCTACCGGCAGGGCTGGCTGCTGGCTACTTGAAAGGACACTCTAGAAGGGACTTCACTGCTT
TTGTGGCTTTTGAGACCCAGGGAATCCCAGTCACCAAGGACTTGGAGAGGCTGGAATGCTGACA
TCCTGTTTTGAGCTCAGGGGACCTCCTTAGAAGGAAGAAGTGCTTTGTTGGCCCCAAGGCTCAA
GTCCAAGCCCAGAGTTAACATTTGACCCAGGGAACCTTCACATCCTCCCCGCAACACTCGCTCT
CGGCTATGCTGTTCCCTCTTTCCTCTGACCACAGATCCTGTAGGGCTGAAAGGGGACAAGTCCT
AAGCAGCCTGCCCCTGCCTAACCCTCCCCGGCGTCTTCCCGGTTACCGAGCACCAGGTGGGTTA
AGGCTGGGACTGGCCGTCCCCATCTCCGCATCTCGTGGGCCTGACACCTGAAGCCATCTTAGCT
CATTTGTTTGTTACACTCCTTTCCCAAGAATCCATCTTAATGCCTCCTGCCAGCTGCTGCCTTG
GTGCCTCCTCCAAGGGCCATAAATGTCTTGCCTCATCTGAGGGCTTAAGAGTCCTTAGTTGTAT
TAGTTTCATTGTCAGAACAAATTAAAATTTTC

hide sequence

RefSeq Acc Id:

XM_006247586 ⟹ XP_006247648

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	91,594,657 - 91,623,702 (-)	NCBI
mRatBN7.2	10	91,094,849 - 91,123,890 (-)	NCBI
Rnor_6.0	10	94,355,369 - 94,384,404 (-)	NCBI
Rnor_5.0	10	94,104,039 - 94,133,334 (-)	NCBI

Sequence:

show sequence

AGGCTCGGCCAGTCTCCCTGGTTCCCTCCACTGCGCATGGCACGTTGCGTACCGCCCTCCCAGC
AACCGGCCTGGCGGCAGCGCGGCCACAAAACTGAGGAGGCGGAGCCGAGACGGAGTCGGTACTG
CGCTCTGACTCCTAGACCAGGTTTAAGTTTTTGAAGTTGAAGTAGGTCTACACAGTAGGAACCC
ATGTCTTTTCTTGTAAGTAAACCAGAGCGAATTAGGCGGTGGGTCTCGGAAAAGTTCATTGTTG
AGGGCTTAAGAGATTTGGAACTGTTTGGAGAGCAGCCTCCGGGTGACACTCGGAGAAAAGCCAA
TGAGGCGAGCTCAGAGTCCATAGCATCCTTCTCCAAACCAGAGATCATGAGTAGCTTTCTGCCA
GAGGGCGGGTGTTACGAGCTGCTCTCCGTCATAGGCAAAGGGTTTGAGGACTTGATGACAGTGA
ATTTAGCCAGGTACAAACCAACAGGAGAGTATGTGACAGTACGAAGGATCAACCTAGAAGCTTG
TTCCAATGAGATGGTGACGTTCTTGCAGGGGGAGCTTCATGTCTCTAAACTCTTCAGCCATCCC
AATATCGTGCCGTATCGAGCCACCTTCATCGCAGACAACGAGCTGTGGGCCGTCACATCATTCA
TGGCGTACGGTTCTGCAAAGGATCTCATTGGCACACACTTCATGGACGGCATGAGTGAACTGGC
GATTGCGTACATCCTGCAGGGGGTGCTAAAGGCCTTAGACTACATCCATCACATGGGCTATGTG
CACAGGAGTGTCAAGGCCAGCCACATTCTGATCTCCACGGATGGGAAGGTCTACCTGTCTGGCT
TACGCAGCAACCTTAGCATGATCAGTCATGGACAACGGCAGCGTGCGGTCCATGATTTCCCCAA
ATATAGCATCAAGGTCCTGCCTTGGCTCAGCCCAGAAGTCCTCCAGCAGAATCTTCAGGGTTAT
GACGCCAAGTCTGATATCTACAGTGTGGGAATCACAGCGTGCGAACTAGCCAATGGCCATGTCC
CCTTCAAAGACATGCCTGCTACTCAGATGCTGCTAGAGAAACTTAATGGCACCGTGCCCTGCCT
GCTGGACACCAGCACCATCCCTGCTGAGGAGCTGACCATGAGTCCCTCCCGCTCCATTGCCAAC
CCTGGCCTGAATGACAGCCTGGCCGCTGGTAGCCTCCGGCCTGCCAATGGTGACTCCCCTTCCC
ACCCCTACCACCGAACCTTCTCACCCCATTTCCACAACTTTGTGGAGCAGTGCCTTCAGCGCAA
CCCTGATGCAAGGCCAAACGCCAGCACCCTCCTGAACCACTCCTTCTTCAAGCAGGAGCTATGG
CCTGGTAACCGAAGGTCCGGTGATGTCCTGGGACCTGAACTACAGGATCCGTACTTGTCTCTCT
CCCTCAGATCAAGCGACGTGCTTCCGAGGCTTTACCTGAGTTGCTCCGCCCAGTCACTCCCATC
ACCAGCTTCGAGGGCAGCCAGTCTCAGGATCATAGTGGAATCTTAGGCCTGGTGACAAACCTGG
AAGACCTGGAGGTGGATGACTGGGAGTTCTGAATCTCTGCCGCCTGCACCCTCCAGCTGGGGTG
GGGTGTGAGCCCAGGGCCTTCTTGAGGACCAGCATCTGCCTCTGGCTGCAGGCTGGGTTCAAAG
GACATTCTACCGGCAGGGCTGGCTGCTGGCTACTTGAAAGGACACTCTAGAAGGGACTTCACTG
CTTTTGTGGCTTTTGAGACCCAGGGAATCCCAGTCACCAAGGACTTGGAGAGGCTGGAATGCTG
ACATCCTGTTTTGAGCTCAGGGGACCTCCTTAGAAGGAAGAAGTGCTTTGTTGGCCCCAAGGCT
CAAGTCCAAGCCCAGAGTTAACATTTGACCCAGGGAACCTTCACATCCTCCCCGCAACACTCGC
TCTCGGCTATGCTGTTCCCTCTTTCCTCTGACCACAGATCCTGTAGGGCTGAAAGGGGACAAGT
CCTAAGCAGCCTGCCCCTGCCTAACCCTCCCCGGCGTCTTCCCGGTTACCGAGCACCAGGTGGG
TTAAGGCTGGGACTGGCCGTCCCCATCTCCGCATCTCGTGGGCCTGACACCTGAAGCCATCTTA
GCTCATTTGTTTGTTACACTCCTTTCCCAAGAATCCATCTTAATGCCTCCTGCCAGCTGCTGCC
TTGGTGCCTCCTCCAAGGGCCATAAATGTCTTGCCTCATCTGAGGGCTTAAGAGTCCTTAGTTG
TATTAGTTTCATTGTCAGAACAAATTAAAATTTTCAGAGTATGTTGGGAA

hide sequence

RefSeq Acc Id:

XM_008768359 ⟹ XP_008766581

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	91,594,657 - 91,623,702 (-)	NCBI
mRatBN7.2	10	91,094,849 - 91,123,890 (-)	NCBI
Rnor_6.0	10	94,355,369 - 94,384,404 (-)	NCBI

Sequence:

show sequence

AGGCTCGGCCAGTCTCCCTGGTTCCCTCCACTGCGCATGGCACGTTGCGTACCGCCCTCCCAGC
AACCGGCCTGGCGGCAGCGCGGCCACAAAACTGAGGAGGCGGAGCCGAGACGGAGTCGGTACTG
CGCTCTGACTCCTAGACCAGGTTTAAGTTTTTGAAGTTGAAGTAGGTCTACACAGTAGGAACCC
ATGTCTTTTCTTGTAAGTAAACCAGAGCGAATTAGGCGGTGGGTCTCGGAAAAGTTCATTGTTG
AGGGCTTAAGAGATTTGGAACTGTTTGGAGAGCAGCCTCCGGGTGACACTCGGAGAAAAGCCAA
TGAGGCGAGCTCAGAGTCCATAGCATCCTTCTCCAAACCAGAGATCATGAGTAGCTTTCTGCCA
GAGGGCGGGTGTTACGAGCTGCTCTCCGTCATAGGCAAAGGGTTTGAGGACTTGATGACAGTGA
ATTTAGCCAGGTACAAACCAACAGGAGAGTATGTGACAGTACGAAGGATCAACCTAGAAGCTTG
TTCCAATGAGATGGTGACGTTCTTGCAGGGGGAGCTTCATGTCTCTAAACTCTTCAGCCATCCC
AATATCGTGCCGTATCGAGCCACCTTCATCGCAGACAACGAGCTGTGGGCCGTCACATCATTCA
TGGCGTACGGTTCTGCAAAGGATCTCATTGGCACACACTTCATGGACGGCATGAGTGAACTGGC
GATTGCGTACATCCTGCAGGGGGTGCTAAAGGCCTTAGACTACATCCATCACATGGGCTATGTG
CACAGGAGTGTCAAGGCCAGCCACATTCTGATCTCCACGGATGGGAAGGTCTACCTGTCTGGCT
TACGCAGCAACCTTAGCATGATCAGTCATGGACAACGGCAGCGTGCGGTCCATGATTTCCCCAA
ATATAGCATCAAGGTCCTGCCTTGGCTCAGCCCAGAAGTCCTCCAGCAGAATCTTCAGGGTTAT
GACGCCAAGTCTGATATCTACAGTGTGGGAATCACAGCGTGCGAACTAGCCAATGGCCATGTCC
CCTTCAAAGACATGCCTGCTACTCAGATGCTGCTAGAGAAACTTAATGGCACCGTGCCCTGCCT
GCTGGACACCAGCACCATCCCTGCTGAGGAGCTGACCATGAGTCCCTCCCGCTCCATTGCCAAC
CCTGGCCTGAATGACAGCCTGGCCGCTGGTAGCCTCCGGCCTGCCAATGGTGACTCCCCTTCCC
ACCCCTACCACCGAACCTTCTCACCCCATTTCCACAACTTTGTGGAGCAGTGCCTTCAGCGCAA
CCCTGATGCAAGGCCAAACGCCAGCACCCTCCTGAACCACTCCTTCTTCAAGCAGCAGGAGCTA
TGGCCTGGTAACCGAAGGTCCGGTGATGTCCTGGGACCTGAACTACAGGATCCGTACTTGTCTC
TCTCCCTCAGATCAAGCGACGTGCTTCCGAGGCTTTACCTGAGTTGCTCCGCCCAGTCACTCCC
ATCACCAGCTTCGAGGGCAGCCAGTCTCAGGATCATAGTGGAATCTTAGGCCTGGTGACAAACC
TGGAAGACCTGGAGGTGGATGACTGGGAGTTCTGAATCTCTGCCGCCTGCACCCTCCAGCTGGG
GTGGGGTGTGAGCCCAGGGCCTTCTTGAGGACCAGCATCTGCCTCTGGCTGCAGGCTGGGTTCA
AAGGACATTCTACCGGCAGGGCTGGCTGCTGGCTACTTGAAAGGACACTCTAGAAGGGACTTCA
CTGCTTTTGTGGCTTTTGAGACCCAGGGAATCCCAGTCACCAAGGACTTGGAGAGGCTGGAATG
CTGACATCCTGTTTTGAGCTCAGGGGACCTCCTTAGAAGGAAGAAGTGCTTTGTTGGCCCCAAG
GCTCAAGTCCAAGCCCAGAGTTAACATTTGACCCAGGGAACCTTCACATCCTCCCCGCAACACT
CGCTCTCGGCTATGCTGTTCCCTCTTTCCTCTGACCACAGATCCTGTAGGGCTGAAAGGGGACA
AGTCCTAAGCAGCCTGCCCCTGCCTAACCCTCCCCGGCGTCTTCCCGGTTACCGAGCACCAGGT
GGGTTAAGGCTGGGACTGGCCGTCCCCATCTCCGCATCTCGTGGGCCTGACACCTGAAGCCATC
TTAGCTCATTTGTTTGTTACACTCCTTTCCCAAGAATCCATCTTAATGCCTCCTGCCAGCTGCT
GCCTTGGTGCCTCCTCCAAGGGCCATAAATGTCTTGCCTCATCTGAGGGCTTAAGAGTCCTTAG
TTGTATTAGTTTCATTGTCAGAACAAATTAAAATTTTCAGAGTATGTTGGGAA

hide sequence

RefSeq Acc Id:

XM_008768360 ⟹ XP_008766582

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	91,594,657 - 91,623,702 (-)	NCBI
mRatBN7.2	10	91,094,849 - 91,123,890 (-)	NCBI
Rnor_6.0	10	94,355,369 - 94,384,404 (-)	NCBI

Sequence:

show sequence

AGGCTCGGCCAGTCTCCCTGGTTCCCTCCACTGCGCATGGCACGTTGCGTACCGCCCTCCCAGC
AACCGGCCTGGCGGCAGCGCGGCCACAAAACTGAGGAGGCGGAGCCGAGACGGAGTCGGTACTG
CGCTCTGACTCCTAGACCAGGTTTAAGTTTTTGAAGTTGAAGTAGGTCTACACAGTAGGAACCC
ATGTCTTTTCTTCGGTGGGTCTCGGAAAAGTTCATTGTTGAGGGCTTAAGAGATTTGGAACTGT
TTGGAGAGCAGCCTCCGGGTGACACTCGGAGAAAAGCCAATGAGGCGAGCTCAGAGTCCATAGC
ATCCTTCTCCAAACCAGAGATCATGAGTAGCTTTCTGCCAGAGGGCGGGTGTTACGAGCTGCTC
TCCGTCATAGGCAAAGGGTTTGAGGACTTGATGACAGTGAATTTAGCCAGGTACAAACCAACAG
GAGAGTATGTGACAGTACGAAGGATCAACCTAGAAGCTTGTTCCAATGAGATGGTGACGTTCTT
GCAGGGGGAGCTTCATGTCTCTAAACTCTTCAGCCATCCCAATATCGTGCCGTATCGAGCCACC
TTCATCGCAGACAACGAGCTGTGGGCCGTCACATCATTCATGGCGTACGGTTCTGCAAAGGATC
TCATTGGCACACACTTCATGGACGGCATGAGTGAACTGGCGATTGCGTACATCCTGCAGGGGGT
GCTAAAGGCCTTAGACTACATCCATCACATGGGCTATGTGCACAGGAGTGTCAAGGCCAGCCAC
ATTCTGATCTCCACGGATGGGAAGGTCTACCTGTCTGGCTTACGCAGCAACCTTAGCATGATCA
GTCATGGACAACGGCAGCGTGCGGTCCATGATTTCCCCAAATATAGCATCAAGGTCCTGCCTTG
GCTCAGCCCAGAAGTCCTCCAGCAGAATCTTCAGGGTTATGACGCCAAGTCTGATATCTACAGT
GTGGGAATCACAGCGTGCGAACTAGCCAATGGCCATGTCCCCTTCAAAGACATGCCTGCTACTC
AGATGCTGCTAGAGAAACTTAATGGCACCGTGCCCTGCCTGCTGGACACCAGCACCATCCCTGC
TGAGGAGCTGACCATGAGTCCCTCCCGCTCCATTGCCAACCCTGGCCTGAATGACAGCCTGGCC
GCTGGTAGCCTCCGGCCTGCCAATGGTGACTCCCCTTCCCACCCCTACCACCGAACCTTCTCAC
CCCATTTCCACAACTTTGTGGAGCAGTGCCTTCAGCGCAACCCTGATGCAAGGCCAAACGCCAG
CACCCTCCTGAACCACTCCTTCTTCAAGCAGCAGGAGCTATGGCCTGGTAACCGAAGGTCCGGT
GATGTCCTGGGACCTGAACTACAGGATCCGTACTTGTCTCTCTCCCTCAGATCAAGCGACGTGC
TTCCGAGGCTTTACCTGAGTTGCTCCGCCCAGTCACTCCCATCACCAGCTTCGAGGGCAGCCAG
TCTCAGGATCATAGTGGAATCTTAGGCCTGGTGACAAACCTGGAAGACCTGGAGGTGGATGACT
GGGAGTTCTGAATCTCTGCCGCCTGCACCCTCCAGCTGGGGTGGGGTGTGAGCCCAGGGCCTTC
TTGAGGACCAGCATCTGCCTCTGGCTGCAGGCTGGGTTCAAAGGACATTCTACCGGCAGGGCTG
GCTGCTGGCTACTTGAAAGGACACTCTAGAAGGGACTTCACTGCTTTTGTGGCTTTTGAGACCC
AGGGAATCCCAGTCACCAAGGACTTGGAGAGGCTGGAATGCTGACATCCTGTTTTGAGCTCAGG
GGACCTCCTTAGAAGGAAGAAGTGCTTTGTTGGCCCCAAGGCTCAAGTCCAAGCCCAGAGTTAA
CATTTGACCCAGGGAACCTTCACATCCTCCCCGCAACACTCGCTCTCGGCTATGCTGTTCCCTC
TTTCCTCTGACCACAGATCCTGTAGGGCTGAAAGGGGACAAGTCCTAAGCAGCCTGCCCCTGCC
TAACCCTCCCCGGCGTCTTCCCGGTTACCGAGCACCAGGTGGGTTAAGGCTGGGACTGGCCGTC
CCCATCTCCGCATCTCGTGGGCCTGACACCTGAAGCCATCTTAGCTCATTTGTTTGTTACACTC
CTTTCCCAAGAATCCATCTTAATGCCTCCTGCCAGCTGCTGCCTTGGTGCCTCCTCCAAGGGCC
ATAAATGTCTTGCCTCATCTGAGGGCTTAAGAGTCCTTAGTTGTATTAGTTTCATTGTCAGAAC
AAATTAAAATTTTCAGAGTATGTTGGGAA

hide sequence

RefSeq Acc Id:

XM_008768361 ⟹ XP_008766583

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	91,594,657 - 91,623,702 (-)	NCBI
mRatBN7.2	10	91,094,849 - 91,123,890 (-)	NCBI
Rnor_6.0	10	94,355,369 - 94,384,403 (-)	NCBI

Sequence:

show sequence

GGCTCGGCCAGTCTCCCTGGTTCCCTCCACTGCGCATGGCACGTTGCGTACCGCCCTCCCAGCA
ACCGGCCTGGCGGCAGCGCGGCCACAAAACTGAGGAGGCGGAGCCGAGACGGAGTCGGTACTGC
GCTCTGACTCCTAGACCAGGTTTAAGTTTTTGAAGTTGAAGTAGGTCTACACAGTAGGAACCCA
TGTCTTTTCTTGTAAGTAAACCAGAGCGAATTAGGGCCAATGAGGCGAGCTCAGAGTCCATAGC
ATCCTTCTCCAAACCAGAGATCATGAGTAGCTTTCTGCCAGAGGGCGGGTGTTACGAGCTGCTC
TCCGTCATAGGCAAAGGGTTTGAGGACTTGATGACAGTGAATTTAGCCAGGTACAAACCAACAG
GAGAGTATGTGACAGTACGAAGGATCAACCTAGAAGCTTGTTCCAATGAGATGGTGACGTTCTT
GCAGGGGGAGCTTCATGTCTCTAAACTCTTCAGCCATCCCAATATCGTGCCGTATCGAGCCACC
TTCATCGCAGACAACGAGCTGTGGGCCGTCACATCATTCATGGCGTACGGTTCTGCAAAGGATC
TCATTGGCACACACTTCATGGACGGCATGAGTGAACTGGCGATTGCGTACATCCTGCAGGGGGT
GCTAAAGGCCTTAGACTACATCCATCACATGGGCTATGTGCACAGGAGTGTCAAGGCCAGCCAC
ATTCTGATCTCCACGGATGGGAAGGTCTACCTGTCTGGCTTACGCAGCAACCTTAGCATGATCA
GTCATGGACAACGGCAGCGTGCGGTCCATGATTTCCCCAAATATAGCATCAAGGTCCTGCCTTG
GCTCAGCCCAGAAGTCCTCCAGCAGAATCTTCAGGGTTATGACGCCAAGTCTGATATCTACAGT
GTGGGAATCACAGCGTGCGAACTAGCCAATGGCCATGTCCCCTTCAAAGACATGCCTGCTACTC
AGATGCTGCTAGAGAAACTTAATGGCACCGTGCCCTGCCTGCTGGACACCAGCACCATCCCTGC
TGAGGAGCTGACCATGAGTCCCTCCCGCTCCATTGCCAACCCTGGCCTGAATGACAGCCTGGCC
GCTGGTAGCCTCCGGCCTGCCAATGGTGACTCCCCTTCCCACCCCTACCACCGAACCTTCTCAC
CCCATTTCCACAACTTTGTGGAGCAGTGCCTTCAGCGCAACCCTGATGCAAGGCCAAACGCCAG
CACCCTCCTGAACCACTCCTTCTTCAAGCAGCAGGAGCTATGGCCTGGTAACCGAAGGTCCGGT
GATGTCCTGGGACCTGAACTACAGGATCCGTACTTGTCTCTCTCCCTCAGATCAAGCGACGTGC
TTCCGAGGCTTTACCTGAGTTGCTCCGCCCAGTCACTCCCATCACCAGCTTCGAGGGCAGCCAG
TCTCAGGATCATAGTGGAATCTTAGGCCTGGTGACAAACCTGGAAGACCTGGAGGTGGATGACT
GGGAGTTCTGAATCTCTGCCGCCTGCACCCTCCAGCTGGGGTGGGGTGTGAGCCCAGGGCCTTC
TTGAGGACCAGCATCTGCCTCTGGCTGCAGGCTGGGTTCAAAGGACATTCTACCGGCAGGGCTG
GCTGCTGGCTACTTGAAAGGACACTCTAGAAGGGACTTCACTGCTTTTGTGGCTTTTGAGACCC
AGGGAATCCCAGTCACCAAGGACTTGGAGAGGCTGGAATGCTGACATCCTGTTTTGAGCTCAGG
GGACCTCCTTAGAAGGAAGAAGTGCTTTGTTGGCCCCAAGGCTCAAGTCCAAGCCCAGAGTTAA
CATTTGACCCAGGGAACCTTCACATCCTCCCCGCAACACTCGCTCTCGGCTATGCTGTTCCCTC
TTTCCTCTGACCACAGATCCTGTAGGGCTGAAAGGGGACAAGTCCTAAGCAGCCTGCCCCTGCC
TAACCCTCCCCGGCGTCTTCCCGGTTACCGAGCACCAGGTGGGTTAAGGCTGGGACTGGCCGTC
CCCATCTCCGCATCTCGTGGGCCTGACACCTGAAGCCATCTTAGCTCATTTGTTTGTTACACTC
CTTTCCCAAGAATCCATCTTAATGCCTCCTGCCAGCTGCTGCCTTGGTGCCTCCTCCAAGGGCC
ATAAATGTCTTGCCTCATCTGAGGGCTTAAGAGTCCTTAGTTGTATTAGTTTCATTGTCAGAAC
AAATTAAAATTTTCAGAGTATGTTGGGAA

hide sequence

RefSeq Acc Id:

XM_008768362 ⟹ XP_008766584

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	91,594,657 - 91,623,702 (-)	NCBI
mRatBN7.2	10	91,094,849 - 91,123,890 (-)	NCBI
Rnor_6.0	10	94,355,369 - 94,384,403 (-)	NCBI

Sequence:

show sequence

GGCTCGGCCAGTCTCCCTGGTTCCCTCCACTGCGCATGGCACGTTGCGTACCGCCCTCCCAGCA
ACCGGCCTGGCGGCAGCGCGGCCACAAAACTGAGGAGGCGGAGCCGAGACGGAGTCGGTACTGC
GCTCTGACTCCTAGACCAGGTTTAAGTTTTTGAAGTTGAAGTAGGTCTACACAGTAGGAACCCA
TGTCTTTTCTTGCCAATGAGGCGAGCTCAGAGTCCATAGCATCCTTCTCCAAACCAGAGATCAT
GAGTAGCTTTCTGCCAGAGGGCGGGTGTTACGAGCTGCTCTCCGTCATAGGCAAAGGGTTTGAG
GACTTGATGACAGTGAATTTAGCCAGGTACAAACCAACAGGAGAGTATGTGACAGTACGAAGGA
TCAACCTAGAAGCTTGTTCCAATGAGATGGTGACGTTCTTGCAGGGGGAGCTTCATGTCTCTAA
ACTCTTCAGCCATCCCAATATCGTGCCGTATCGAGCCACCTTCATCGCAGACAACGAGCTGTGG
GCCGTCACATCATTCATGGCGTACGGTTCTGCAAAGGATCTCATTGGCACACACTTCATGGACG
GCATGAGTGAACTGGCGATTGCGTACATCCTGCAGGGGGTGCTAAAGGCCTTAGACTACATCCA
TCACATGGGCTATGTGCACAGGAGTGTCAAGGCCAGCCACATTCTGATCTCCACGGATGGGAAG
GTCTACCTGTCTGGCTTACGCAGCAACCTTAGCATGATCAGTCATGGACAACGGCAGCGTGCGG
TCCATGATTTCCCCAAATATAGCATCAAGGTCCTGCCTTGGCTCAGCCCAGAAGTCCTCCAGCA
GAATCTTCAGGGTTATGACGCCAAGTCTGATATCTACAGTGTGGGAATCACAGCGTGCGAACTA
GCCAATGGCCATGTCCCCTTCAAAGACATGCCTGCTACTCAGATGCTGCTAGAGAAACTTAATG
GCACCGTGCCCTGCCTGCTGGACACCAGCACCATCCCTGCTGAGGAGCTGACCATGAGTCCCTC
CCGCTCCATTGCCAACCCTGGCCTGAATGACAGCCTGGCCGCTGGTAGCCTCCGGCCTGCCAAT
GGTGACTCCCCTTCCCACCCCTACCACCGAACCTTCTCACCCCATTTCCACAACTTTGTGGAGC
AGTGCCTTCAGCGCAACCCTGATGCAAGGCCAAACGCCAGCACCCTCCTGAACCACTCCTTCTT
CAAGCAGCAGGAGCTATGGCCTGGTAACCGAAGGTCCGGTGATGTCCTGGGACCTGAACTACAG
GATCCGTACTTGTCTCTCTCCCTCAGATCAAGCGACGTGCTTCCGAGGCTTTACCTGAGTTGCT
CCGCCCAGTCACTCCCATCACCAGCTTCGAGGGCAGCCAGTCTCAGGATCATAGTGGAATCTTA
GGCCTGGTGACAAACCTGGAAGACCTGGAGGTGGATGACTGGGAGTTCTGAATCTCTGCCGCCT
GCACCCTCCAGCTGGGGTGGGGTGTGAGCCCAGGGCCTTCTTGAGGACCAGCATCTGCCTCTGG
CTGCAGGCTGGGTTCAAAGGACATTCTACCGGCAGGGCTGGCTGCTGGCTACTTGAAAGGACAC
TCTAGAAGGGACTTCACTGCTTTTGTGGCTTTTGAGACCCAGGGAATCCCAGTCACCAAGGACT
TGGAGAGGCTGGAATGCTGACATCCTGTTTTGAGCTCAGGGGACCTCCTTAGAAGGAAGAAGTG
CTTTGTTGGCCCCAAGGCTCAAGTCCAAGCCCAGAGTTAACATTTGACCCAGGGAACCTTCACA
TCCTCCCCGCAACACTCGCTCTCGGCTATGCTGTTCCCTCTTTCCTCTGACCACAGATCCTGTA
GGGCTGAAAGGGGACAAGTCCTAAGCAGCCTGCCCCTGCCTAACCCTCCCCGGCGTCTTCCCGG
TTACCGAGCACCAGGTGGGTTAAGGCTGGGACTGGCCGTCCCCATCTCCGCATCTCGTGGGCCT
GACACCTGAAGCCATCTTAGCTCATTTGTTTGTTACACTCCTTTCCCAAGAATCCATCTTAATG
CCTCCTGCCAGCTGCTGCCTTGGTGCCTCCTCCAAGGGCCATAAATGTCTTGCCTCATCTGAGG
GCTTAAGAGTCCTTAGTTGTATTAGTTTCATTGTCAGAACAAATTAAAATTTTCAGAGTATGTT
GGGAA

hide sequence

RefSeq Acc Id:

XM_008768364 ⟹ XP_008766586

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	91,594,657 - 91,623,667 (-)	NCBI
mRatBN7.2	10	91,094,849 - 91,123,842 (-)	NCBI
Rnor_6.0	10	94,355,369 - 94,384,403 (-)	NCBI

Sequence:

show sequence

GGCTCGGCCAGTCTCCCTGGTTCCCTCCACTGCGCATGGCACGTTGCGTACCGCCCTCCCAGCA
ACCGGCCTGGCGGCAGCGCGGCCACAAAACTGAGGAGGCGGAGCCGAGACGGAGTCGGTACTGC
GCTCTGACTCCTAGACCAGGTTTAAGTTTTTGAAGTTGAAGTAGGTCTACACAGTAGGAACCCA
TGTCTTTTCTTCGGTGGGTCTCGGAAAAGTTCATTGTTGAGGGCTTAAGAGATTTGGAACTGTT
TGGAGGCCAATGAGGCGAGCTCAGAGTCCATAGCATCCTTCTCCAAACCAGAGATCATGAGTAG
CTTTCTGCCAGAGGGCGGGTGTTACGAGCTGCTCTCCGTCATAGGCAAAGGGTTTGAGGACTTG
ATGACAGTGAATTTAGCCAGGTACAAACCAACAGGAGAGTATGTGACAGTACGAAGGATCAACC
TAGAAGCTTGTTCCAATGAGATGGTGACGTTCTTGCAGGGGGAGCTTCATGTCTCTAAACTCTT
CAGCCATCCCAATATCGTGCCGTATCGAGCCACCTTCATCGCAGACAACGAGCTGTGGGCCGTC
ACATCATTCATGGCGTACGGTTCTGCAAAGGATCTCATTGGCACACACTTCATGGACGGCATGA
GTGAACTGGCGATTGCGTACATCCTGCAGGGGGTGCTAAAGGCCTTAGACTACATCCATCACAT
GGGCTATGTGCACAGGAGTGTCAAGGCCAGCCACATTCTGATCTCCACGGATGGGAAGGTCTAC
CTGTCTGGCTTACGCAGCAACCTTAGCATGATCAGTCATGGACAACGGCAGCGTGCGGTCCATG
ATTTCCCCAAATATAGCATCAAGGTCCTGCCTTGGCTCAGCCCAGAAGTCCTCCAGCAGAATCT
TCAGGGTTATGACGCCAAGTCTGATATCTACAGTGTGGGAATCACAGCGTGCGAACTAGCCAAT
GGCCATGTCCCCTTCAAAGACATGCCTGCTACTCAGATGCTGCTAGAGAAACTTAATGGCACCG
TGCCCTGCCTGCTGGACACCAGCACCATCCCTGCTGAGGAGCTGACCATGAGTCCCTCCCGCTC
CATTGCCAACCCTGGCCTGAATGACAGCCTGGCCGCTGGTAGCCTCCGGCCTGCCAATGGTGAC
TCCCCTTCCCACCCCTACCACCGAACCTTCTCACCCCATTTCCACAACTTTGTGGAGCAGTGCC
TTCAGCGCAACCCTGATGCAAGGCCAAACGCCAGCACCCTCCTGAACCACTCCTTCTTCAAGCA
GCAGGAGCTATGGCCTGGTAACCGAAGGTCCGGTGATGTCCTGGGACCTGAACTACAGGATCCG
TACTTGTCTCTCTCCCTCAGATCAAGCGACGTGCTTCCGAGGCTTTACCTGAGTTGCTCCGCCC
AGTCACTCCCATCACCAGCTTCGAGGGCAGCCAGTCTCAGGATCATAGTGGAATCTTAGGCCTG
GTGACAAACCTGGAAGACCTGGAGGTGGATGACTGGGAGTTCTGAATCTCTGCCGCCTGCACCC
TCCAGCTGGGGTGGGGTGTGAGCCCAGGGCCTTCTTGAGGACCAGCATCTGCCTCTGGCTGCAG
GCTGGGTTCAAAGGACATTCTACCGGCAGGGCTGGCTGCTGGCTACTTGAAAGGACACTCTAGA
AGGGACTTCACTGCTTTTGTGGCTTTTGAGACCCAGGGAATCCCAGTCACCAAGGACTTGGAGA
GGCTGGAATGCTGACATCCTGTTTTGAGCTCAGGGGACCTCCTTAGAAGGAAGAAGTGCTTTGT
TGGCCCCAAGGCTCAAGTCCAAGCCCAGAGTTAACATTTGACCCAGGGAACCTTCACATCCTCC
CCGCAACACTCGCTCTCGGCTATGCTGTTCCCTCTTTCCTCTGACCACAGATCCTGTAGGGCTG
AAAGGGGACAAGTCCTAAGCAGCCTGCCCCTGCCTAACCCTCCCCGGCGTCTTCCCGGTTACCG
AGCACCAGGTGGGTTAAGGCTGGGACTGGCCGTCCCCATCTCCGCATCTCGTGGGCCTGACACC
TGAAGCCATCTTAGCTCATTTGTTTGTTACACTCCTTTCCCAAGAATCCATCTTAATGCCTCCT
GCCAGCTGCTGCCTTGGTGCCTCCTCCAAGGGCCATAAATGTCTTGCCTCATCTGAGGGCTTAA
GAGTCCTTAGTTGTATTAGTTTCATTGTCAGAACAAATTAAAATTTTCAGAGTATGTTGGGAA

hide sequence

RefSeq Acc Id:

XM_039086166 ⟹ XP_038942094

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	91,594,657 - 91,623,702 (-)	NCBI
mRatBN7.2	10	91,094,849 - 91,123,890 (-)	NCBI

RefSeq Acc Id:

XM_039086167 ⟹ XP_038942095

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	91,594,657 - 91,623,682 (-)	NCBI
mRatBN7.2	10	91,094,849 - 91,123,868 (-)	NCBI

RefSeq Acc Id:

XM_063269202 ⟹ XP_063125272

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	91,594,657 - 91,623,702 (-)	NCBI

RefSeq Acc Id:

XM_063269203 ⟹ XP_063125273

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	91,594,657 - 91,623,710 (-)	NCBI

RefSeq Acc Id:

XM_063269204 ⟹ XP_063125274

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	91,594,657 - 91,623,702 (-)	NCBI

RefSeq Acc Id:

XM_063269205 ⟹ XP_063125275

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	91,594,657 - 91,623,702 (-)	NCBI

RefSeq Acc Id:

XM_063269206 ⟹ XP_063125276

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	91,594,657 - 91,617,370 (-)	NCBI

RefSeq Acc Id:

XM_063269207 ⟹ XP_063125277

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	91,596,360 - 91,623,702 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001402040	(Get FASTA)	NCBI Sequence Viewer
	NP_001402041	(Get FASTA)	NCBI Sequence Viewer
	NP_001402042	(Get FASTA)	NCBI Sequence Viewer
	NP_877972	(Get FASTA)	NCBI Sequence Viewer
	XP_006247648	(Get FASTA)	NCBI Sequence Viewer
	XP_008766581	(Get FASTA)	NCBI Sequence Viewer
	XP_008766582	(Get FASTA)	NCBI Sequence Viewer
	XP_008766583	(Get FASTA)	NCBI Sequence Viewer
	XP_008766584	(Get FASTA)	NCBI Sequence Viewer
	XP_008766586	(Get FASTA)	NCBI Sequence Viewer
	XP_038942094	(Get FASTA)	NCBI Sequence Viewer
	XP_038942095	(Get FASTA)	NCBI Sequence Viewer
	XP_063125272	(Get FASTA)	NCBI Sequence Viewer
	XP_063125273	(Get FASTA)	NCBI Sequence Viewer
	XP_063125274	(Get FASTA)	NCBI Sequence Viewer
	XP_063125275	(Get FASTA)	NCBI Sequence Viewer
	XP_063125276	(Get FASTA)	NCBI Sequence Viewer
	XP_063125277	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH81911	(Get FASTA)	NCBI Sequence Viewer
	AAP92801	(Get FASTA)	NCBI Sequence Viewer
	EDM06365	(Get FASTA)	NCBI Sequence Viewer
	EDM06366	(Get FASTA)	NCBI Sequence Viewer
	EDM06367	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000051998
	ENSRNOP00000081722
	ENSRNOP00000094426
GenBank Protein	Q7TNZ6	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_877972 ⟸ NM_182820
- Peptide Label:	isoform 2
- UniProtKB:	Q7TNZ6 (UniProtKB/Swiss-Prot), Q66HD4 (UniProtKB/Swiss-Prot), A6HK10 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSFLANEASSESIASFSKPEIMSSFLPEGGCYELLSVIGKGFEDLMTVNSRYKPTGEYVTVRRI NLEACSNEMVTFLQGELHVSKLFSHPNIVPYRATFIADNELWAVTSFMAYGSAKDLIGTHFMDG MSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISTDGKVYLSGLRSNLSMISHGQRQRAV HDFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNG TVPCLLDTSTIPAEELTMSPSRSIANPGLNDSLAAGSLRPANGDSPSHPYHRTFSPHFHNFVEQ CLQRNPDARPNASTLLNHSFFKQIKRRASEALPELLRPVTPITSFEGSQSQDHSGILGLVTNLE DLEVDDWEF hide sequence

RefSeq Acc Id:	XP_006247648 ⟸ XM_006247586
- Peptide Label:	isoform X2
- UniProtKB:	F1M341 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSFLVSKPERIRRWVSEKFIVEGLRDLELFGEQPPGDTRRKANEASSESIASFSKPEIMSSFLP EGGCYELLSVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHP NIVPYRATFIADNELWAVTSFMAYGSAKDLIGTHFMDGMSELAIAYILQGVLKALDYIHHMGYV HRSVKASHILISTDGKVYLSGLRSNLSMISHGQRQRAVHDFPKYSIKVLPWLSPEVLQQNLQGY DAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSIAN PGLNDSLAAGSLRPANGDSPSHPYHRTFSPHFHNFVEQCLQRNPDARPNASTLLNHSFFKQELW PGNRRSGDVLGPELQDPYLSLSLRSSDVLPRLYLSCSAQSLPSPASRAASLRIIVES hide sequence

RefSeq Acc Id:	XP_008766582 ⟸ XM_008768360
- Peptide Label:	isoform X3
- UniProtKB:	F1M341 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSFLRWVSEKFIVEGLRDLELFGEQPPGDTRRKANEASSESIASFSKPEIMSSFLPEGGCYELL SVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHPNIVPYRAT FIADNELWAVTSFMAYGSAKDLIGTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASH ILISTDGKVYLSGLRSNLSMISHGQRQRAVHDFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYS VGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSIANPGLNDSLA AGSLRPANGDSPSHPYHRTFSPHFHNFVEQCLQRNPDARPNASTLLNHSFFKQQELWPGNRRSG DVLGPELQDPYLSLSLRSSDVLPRLYLSCSAQSLPSPASRAASLRIIVES hide sequence

RefSeq Acc Id:	XP_008766581 ⟸ XM_008768359
- Peptide Label:	isoform X1
- UniProtKB:	F1M341 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSFLVSKPERIRRWVSEKFIVEGLRDLELFGEQPPGDTRRKANEASSESIASFSKPEIMSSFLP EGGCYELLSVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHP NIVPYRATFIADNELWAVTSFMAYGSAKDLIGTHFMDGMSELAIAYILQGVLKALDYIHHMGYV HRSVKASHILISTDGKVYLSGLRSNLSMISHGQRQRAVHDFPKYSIKVLPWLSPEVLQQNLQGY DAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSIAN PGLNDSLAAGSLRPANGDSPSHPYHRTFSPHFHNFVEQCLQRNPDARPNASTLLNHSFFKQQEL WPGNRRSGDVLGPELQDPYLSLSLRSSDVLPRLYLSCSAQSLPSPASRAASLRIIVES hide sequence

RefSeq Acc Id:	XP_008766584 ⟸ XM_008768362
- Peptide Label:	isoform X8
- UniProtKB:	Q7TNZ6 (UniProtKB/Swiss-Prot), Q66HD4 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MSFLANEASSESIASFSKPEIMSSFLPEGGCYELLSVIGKGFEDLMTVNLARYKPTGEYVTVRR INLEACSNEMVTFLQGELHVSKLFSHPNIVPYRATFIADNELWAVTSFMAYGSAKDLIGTHFMD GMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISTDGKVYLSGLRSNLSMISHGQRQRA VHDFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLN GTVPCLLDTSTIPAEELTMSPSRSIANPGLNDSLAAGSLRPANGDSPSHPYHRTFSPHFHNFVE QCLQRNPDARPNASTLLNHSFFKQQELWPGNRRSGDVLGPELQDPYLSLSLRSSDVLPRLYLSC SAQSLPSPASRAASLRIIVES hide sequence

RefSeq Acc Id:	XP_008766586 ⟸ XM_008768364
- Peptide Label:	isoform X11
- UniProtKB:	F1M341 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSSFLPEGGCYELLSVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVS KLFSHPNIVPYRATFIADNELWAVTSFMAYGSAKDLIGTHFMDGMSELAIAYILQGVLKALDYI HHMGYVHRSVKASHILISTDGKVYLSGLRSNLSMISHGQRQRAVHDFPKYSIKVLPWLSPEVLQ QNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSP SRSIANPGLNDSLAAGSLRPANGDSPSHPYHRTFSPHFHNFVEQCLQRNPDARPNASTLLNHSF FKQQELWPGNRRSGDVLGPELQDPYLSLSLRSSDVLPRLYLSCSAQSLPSPASRAASLRIIVES hide sequence

RefSeq Acc Id:	XP_008766583 ⟸ XM_008768361
- Peptide Label:	isoform X6
- UniProtKB:	F1M341 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSFLVSKPERIRANEASSESIASFSKPEIMSSFLPEGGCYELLSVIGKGFEDLMTVNLARYKPT GEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHPNIVPYRATFIADNELWAVTSFMAYGSAKD LIGTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISTDGKVYLSGLRSNLSMI SHGQRQRAVHDFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPAT QMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSIANPGLNDSLAAGSLRPANGDSPSHPYHRTFS PHFHNFVEQCLQRNPDARPNASTLLNHSFFKQQELWPGNRRSGDVLGPELQDPYLSLSLRSSDV LPRLYLSCSAQSLPSPASRAASLRIIVES hide sequence

Ensembl Acc Id:

ENSRNOP00000051998 ⟸ ENSRNOT00000055125

Ensembl Acc Id:

ENSRNOP00000011894 ⟸ ENSRNOT00000011894

RefSeq Acc Id:	XP_038942094 ⟸ XM_039086166
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I6GKR2 (UniProtKB/TrEMBL), F1M341 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038942095 ⟸ XM_039086167
- Peptide Label:	isoform X11
- UniProtKB:	F1M341 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000081722 ⟸ ENSRNOT00000119526

Ensembl Acc Id:

ENSRNOP00000094426 ⟸ ENSRNOT00000094696

Ensembl Acc Id:

ENSRNOP00000083872 ⟸ ENSRNOT00000095594

RefSeq Acc Id:	NP_001402041 ⟸ NM_001415112
- Peptide Label:	isoform 3
- UniProtKB:	A0A8I5ZXZ5 (UniProtKB/TrEMBL), A6HK12 (UniProtKB/TrEMBL), F1M341 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001402042 ⟸ NM_001415113
- Peptide Label:	isoform 3
- UniProtKB:	A0A8I5ZXZ5 (UniProtKB/TrEMBL), A6HK12 (UniProtKB/TrEMBL), F1M341 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001402040 ⟸ NM_001415111
- Peptide Label:	isoform 1
- UniProtKB:	A6HK11 (UniProtKB/TrEMBL), F1M341 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125273 ⟸ XM_063269203
- Peptide Label:	isoform X7
- UniProtKB:	F1M341 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125274 ⟸ XM_063269204
- Peptide Label:	isoform X9
- UniProtKB:	Q7TNZ6 (UniProtKB/Swiss-Prot), Q66HD4 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_063125272 ⟸ XM_063269202
- Peptide Label:	isoform X4
- UniProtKB:	F1M341 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125275 ⟸ XM_063269205
- Peptide Label:	isoform X10
- UniProtKB:	G3V9L2 (UniProtKB/TrEMBL), F1M341 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125276 ⟸ XM_063269206
- Peptide Label:	isoform X11
- UniProtKB:	F1M341 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125277 ⟸ XM_063269207
- Peptide Label:	isoform X12

Protein Domains

Protein kinase

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q7TNZ6-F1-model_v2	AlphaFold	Q7TNZ6	1-393	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13697835

Promoter ID:

EPDNEW_R8360

Type:

initiation region

Name:

Strada_1

Description:

STE20-related kinase adaptor alpha

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	10	94,384,316 - 94,384,376	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:727905	AgrOrtholog
BioCyc Gene	G2FUF-22962	BioCyc
Ensembl Genes	ENSRNOG00000008637	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000055125	ENTREZGENE
	ENSRNOT00000094696	ENTREZGENE
	ENSRNOT00000119526	ENTREZGENE
Gene3D-CATH	Phosphorylase Kinase, domain 1	UniProtKB/Swiss-Prot
	Transferase(Phosphotransferase) domain 1	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7111907	IMAGE-MGC_LOAD
InterPro	Kinase-like_dom_sf	UniProtKB/Swiss-Prot
	Prot_kinase_dom	UniProtKB/Swiss-Prot
	STRAD_A/B-like	UniProtKB/Swiss-Prot
KEGG Report	rno:303605	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:93856	IMAGE-MGC_LOAD
NCBI Gene	303605	ENTREZGENE
PANTHER	SERINE/THREONINE-PROTEIN KINASE FRAY2	UniProtKB/Swiss-Prot
	STE20-RELATED KINASE ADAPTER PROTEIN ALPHA	UniProtKB/Swiss-Prot
Pfam	Pkinase	UniProtKB/Swiss-Prot
PhenoGen	Strada	PhenoGen
PROSITE	PROTEIN_KINASE_DOM	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000008637	RatGTEx
Superfamily-SCOP	SSF56112	UniProtKB/Swiss-Prot
UniProt	A0A8I5ZSN4_RAT	UniProtKB/TrEMBL
	A0A8I5ZXZ5	ENTREZGENE
	A0A8I6GKR2	ENTREZGENE, UniProtKB/TrEMBL
	A6HK10	ENTREZGENE, UniProtKB/TrEMBL
	A6HK11	ENTREZGENE, UniProtKB/TrEMBL
	A6HK12	ENTREZGENE, UniProtKB/TrEMBL
	F1M341	ENTREZGENE
	G3V9L2	ENTREZGENE, UniProtKB/TrEMBL
	Q66HD4	ENTREZGENE
	Q7TNZ6	ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary	Q66HD4	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2018-12-04	Strada	STE20 related adaptor alpha	Strada	STE20-related kinase adaptor alpha	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2009-07-15	Strada	STE20-related kinase adaptor alpha	Lyk5	protein kinase LYK5	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-07-08	Lyk5	protein kinase LYK5			Symbol and Name status set to approved	1299863	APPROVED

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InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

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Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

RGD Manual Annotations

Imported Annotations - KEGG (archival)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

RGD Manual Annotations

Imported Annotations - KEGG (archival)