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Gene: FKBP1A (FKBP prolyl isomerase 1A) Chlorocebus sabaeus

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Symbol:

FKBP1A

Name:

FKBP prolyl isomerase 1A

RGD ID:

18770791

Description:

ENCODES a protein that exhibits activin receptor binding (ortholog); calcium channel regulator activity (ortholog); enzyme binding (ortholog); INVOLVED IN amyloid fibril formation (ortholog); cytokine-mediated signaling pathway (ortholog); heart morphogenesis (ortholog); PARTICIPATES IN activin signaling pathway; mTOR signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Barth syndrome (ortholog); congenital heart disease (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN axon terminus (ortholog); cytoplasm (ortholog); cytosol (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

FK506 binding protein 1A; peptidyl-prolyl cis-trans isomerase FKBP1A

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	2	55,170,816 - 55,195,380 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666087	1,575,983 - 1,600,558 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
FKBP1A	Green Monkey	congenital heart disease		ISO	Fkbp1a (Mus musculus)	9068941		RGD	PMID:9461216 and REF_RGD_ID:1580388
FKBP1A	Green Monkey	Parkinsonism		ISO	Fkbp1a (Rattus norvegicus)	9068941	mRNA and protein:increased expression:brain	RGD	PMID:17877381 and REF_RGD_ID:2302074

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
FKBP1A	Green Monkey	esophagus squamous cell carcinoma		ISO	FKBP1A (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:21517111
FKBP1A	Green Monkey	Experimental Liver Cirrhosis		ISO	FKBP1A (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:25380136

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
FKBP1A	Green Monkey	Barth syndrome		ISO	Fkbp1a (Mus musculus)	9068941	OMIM:302060	MouseDO

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
FKBP1A	Green Monkey	amyloid fibril formation	involved_in	ISO	FKBP1A (Homo sapiens)	9068941	PMID:18346205	BHF-UCL	PMID:18346205
FKBP1A	Green Monkey	cytokine-mediated signaling pathway	acts_upstream_of_or_within	ISO	MGI:2158807	9068941	PMID:14605212	MGI	PMID:14605212
FKBP1A	Green Monkey	heart morphogenesis	involved_in	ISO	Fkbp1a (Mus musculus)	9068941	PMID:9461216	BHF-UCL	PMID:9461216
FKBP1A	Green Monkey	heart trabecula formation	involved_in	ISO	Fkbp1a (Mus musculus)	9068941	PMID:9461216	BHF-UCL	PMID:9461216
FKBP1A	Green Monkey	muscle contraction	acts_upstream_of_or_within	ISO	MGI:2182095 and MGI:3514012	9068941	PMID:15289441	MGI	PMID:15289441
FKBP1A	Green Monkey	negative regulation of activin receptor signaling pathway	involved_in	ISO	FKBP1A (Homo sapiens)	9068941	PMID:16720724	BHF-UCL	PMID:16720724
FKBP1A	Green Monkey	negative regulation of transforming growth factor beta receptor signaling pathway	involved_in	ISO	FKBP1A (Homo sapiens)	9068941	PMID:11583628	FlyBase	PMID:11583628
FKBP1A	Green Monkey	positive regulation of canonical NF-kappaB signal transduction	involved_in	ISO	FKBP1A (Homo sapiens)	9068941	PMID:12761501	UniProt	PMID:12761501
FKBP1A	Green Monkey	regulation of amyloid precursor protein catabolic process	involved_in	ISO	UniProtKB:P05067	9068941	PMID:24499793	ParkinsonsUK-UCL	PMID:24499793
FKBP1A	Green Monkey	regulation of immune response	involved_in	ISO	FKBP1A (Homo sapiens)	9068941	PMID:2477715	BHF-UCL	PMID:2477715
FKBP1A	Green Monkey	regulation of protein localization	involved_in	ISO	UniProtKB:P05067	9068941	PMID:24499793	ParkinsonsUK-UCL	PMID:24499793
FKBP1A	Green Monkey	regulation of ryanodine-sensitive calcium-release channel activity	involved_in	ISO	Fkbp1a (Mus musculus)	9068941	PMID:9461216	BHF-UCL	PMID:9461216
FKBP1A	Green Monkey	regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion	involved_in	ISO	FKBP1A (Homo sapiens)	9068941	PMID:7592869	BHF-UCL	PMID:7592869
FKBP1A	Green Monkey	release of sequestered calcium ion into cytosol	acts_upstream_of_or_within	ISO	Fkbp1a (Mus musculus)	9068941	PMID:12704193	MGI	PMID:12704193
FKBP1A	Green Monkey	release of sequestered calcium ion into cytosol	acts_upstream_of_or_within	ISO	MGI:2182095 and MGI:3514012	9068941	PMID:15289441	MGI	PMID:15289441
FKBP1A	Green Monkey	response to caffeine	acts_upstream_of_or_within	ISO	MGI:2182095 and MGI:3514012	9068941	PMID:15289441	MGI	PMID:15289441
FKBP1A	Green Monkey	response to iron ion		ISO	Fkbp1a (Rattus norvegicus)	9068941		RGD	PMID:17546681 and REF_RGD_ID:2302076
FKBP1A	Green Monkey	supramolecular fiber organization	involved_in	ISO	FKBP1A (Homo sapiens)	9068941	PMID:18346205	BHF-UCL	PMID:18346205
FKBP1A	Green Monkey	T cell proliferation	acts_upstream_of_or_within	ISO	MGI:2158807	9068941	PMID:14605212	MGI	PMID:14605212
FKBP1A	Green Monkey	ventricular cardiac muscle tissue morphogenesis	involved_in	ISO	Fkbp1a (Mus musculus)	9068941	PMID:9461216	BHF-UCL	PMID:9461216

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
FKBP1A	Green Monkey	axon terminus		ISO	Fkbp1a (Rattus norvegicus)	9068941		RGD	PMID:12494287 and REF_RGD_ID:1580386
FKBP1A	Green Monkey	cytoplasm	located_in	ISO	FKBP1A (Homo sapiens)	9068941	PMID:12443530	BHF-UCL	PMID:12443530
FKBP1A	Green Monkey	cytosol	located_in	ISO	FKBP1A (Homo sapiens)	9068941	PMID:1701173	BHF-UCL	PMID:1701173
FKBP1A	Green Monkey	membrane	located_in	ISO	FKBP1A (Homo sapiens)	9068941	PMID:12443530	BHF-UCL	PMID:12443530
FKBP1A	Green Monkey	membrane	located_in	ISO	Fkbp1a (Mus musculus)	9068941	PMID:12704193	MGI	PMID:12704193
FKBP1A	Green Monkey	sarcoplasmic reticulum membrane	located_in	ISO	Fkbp1a (Mus musculus)	9068941	PMID:14592808	MGI	PMID:14592808
FKBP1A	Green Monkey	synapse	is_active_in	ISO	Fkbp1a (Mus musculus)	9068941	PMID:24534009	SynGO	PMID:24534009
FKBP1A	Green Monkey	Z disc	located_in	ISO	FKBP1A (Homo sapiens)	9068941	PMID:20431056	BHF-UCL	PMID:20431056

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
FKBP1A	Green Monkey	activin receptor binding	enables	ISO	UniProtKB:P36896	9068941	PMID:16720724	BHF-UCL	PMID:16720724
FKBP1A	Green Monkey	calcium channel regulator activity	enables	ISO	FKBP1A (Homo sapiens)	9068941	PMID:7592869	BHF-UCL	PMID:7592869
FKBP1A	Green Monkey	enzyme binding		ISO	Pkm (Rattus norvegicus) and Eno1 (Rattus norvegicus)	9068941		RGD	PMID:17877381 and REF_RGD_ID:2302074
FKBP1A	Green Monkey	FK506 binding	enables	ISO	FKBP1A (Homo sapiens)	9068941	PMID:7592869 and PMID:9880681	BHF-UCL	PMID:7592869 and PMID:9880681
FKBP1A	Green Monkey	FK506 binding	enables	ISO	Fkbp1a (Mus musculus)	9068941	PMID:1722474	MGI	PMID:1722474
FKBP1A	Green Monkey	FK506 binding		ISO	Fkbp1a (Rattus norvegicus)	9068941		RGD	PMID:9013543 and REF_RGD_ID:61587
FKBP1A	Green Monkey	Hsp70 protein binding		ISO	Hspa8 (Rattus norvegicus)	9068941		RGD	PMID:17877381 and REF_RGD_ID:2302074
FKBP1A	Green Monkey	I-SMAD binding	enables	ISO	UniProtKB:O15105	9068941	PMID:16720724	BHF-UCL	PMID:16720724
FKBP1A	Green Monkey	identical protein binding	enables	ISO	PR:P26883	9068941	PMID:22750946	MGI	PMID:22750946
FKBP1A	Green Monkey	peptidyl-prolyl cis-trans isomerase activity	enables	ISO	FKBP1A (Homo sapiens)	9068941	PMID:1696686 more ...	BHF-UCL	PMID:1696686 more ...
FKBP1A	Green Monkey	protein binding	enables	ISO	UniProtKB:A6NJ78-4 more ...	9068941	PMID:32814053	IntAct	PMID:32814053
FKBP1A	Green Monkey	protein binding	enables	ISO	UniProtKB:E9PZQ0	9068941	PMID:18268335 and PMID:22939628	IntAct	PMID:18268335 and PMID:22939628
FKBP1A	Green Monkey	protein binding	enables	ISO	UniProtKB:P0C6X7-PRO_0000037309 and UniProtKB:P0C6X7-PRO_0000037312	9068941	PMID:22046132	IntAct	PMID:22046132
FKBP1A	Green Monkey	protein binding	enables	ISO	UniProtKB:O15105 and UniProtKB:P36896	9068941	PMID:16720724	IntAct	PMID:16720724
FKBP1A	Green Monkey	protein binding	enables	ISO	UniProtKB:O15344 more ...	9068941	PMID:25416956	IntAct	PMID:25416956
FKBP1A	Green Monkey	protein binding	enables	ISO	UniProtKB:O15344 and UniProtKB:Q9NYB9-2	9068941	PMID:32296183	IntAct	PMID:32296183
FKBP1A	Green Monkey	protein binding	enables	ISO	UniProtKB:P05067	9068941	PMID:24499793	ParkinsonsUK-UCL	PMID:24499793
FKBP1A	Green Monkey	protein binding	enables	ISO	PR:E9PZQ0	9068941	PMID:12704193 more ...	MGI	PMID:12704193 more ...
FKBP1A	Green Monkey	protein binding	enables	ISO	UniProtKB:Q92990	9068941	PMID:12604780	UniProt	PMID:12604780
FKBP1A	Green Monkey	protein binding	enables	ISO	UniProtKB:P42345	9068941	PMID:10089303 more ...	IntAct	PMID:10089303 more ...
FKBP1A	Green Monkey	protein binding	enables	ISO	UniProtKB:P11716	9068941	PMID:12629052 and PMID:9857007	IntAct	PMID:12629052 and PMID:9857007
FKBP1A	Green Monkey	protein binding	enables	ISO	UniProtKB:Q9TS33	9068941	PMID:10358090	UniProt	PMID:10358090
FKBP1A	Green Monkey	protein binding	enables	ISO	UniProtKB:P36897	9068941	PMID:10025408 and PMID:24658140	IntAct	PMID:10025408 and PMID:24658140
FKBP1A	Green Monkey	protein binding	enables	ISO	UniProtKB:Q92736	9068941	PMID:11237759	IntAct	PMID:11237759
FKBP1A	Green Monkey	protein binding		ISO	Prdx6 (Rattus norvegicus)	9068941		RGD	PMID:17877381 and REF_RGD_ID:2302074
FKBP1A	Green Monkey	signaling receptor inhibitor activity	enables	ISO	FKBP1A (Homo sapiens)	9068941	PMID:16720724	BHF-UCL	PMID:16720724
FKBP1A	Green Monkey	transforming growth factor beta receptor binding	enables	ISO	Fkbp1a (Rattus norvegicus)	9068941	PMID:7518616	BHF-UCL	PMID:7518616 and REF_RGD_ID:8554044
FKBP1A	Green Monkey	transmembrane transporter binding	enables	ISO	UniProtKB:E9PZQ0	9068941	PMID:19198614	BHF-UCL	PMID:19198614
FKBP1A	Green Monkey	type I transforming growth factor beta receptor binding	enables	ISO	UniProtKB:P36897	9068941	PMID:11583628	FlyBase	PMID:11583628
FKBP1A	Green Monkey	type I transforming growth factor beta receptor binding	enables	ISO	Fkbp1a (Rattus norvegicus)	9068941	PMID:7518616	BHF-UCL	PMID:7518616 and REF_RGD_ID:8554044

RGD Manual Annotations

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
FKBP1A	Green Monkey	mTOR signaling pathway		ISO	FKBP1A (Homo sapiens)	9068941		RGD	PMID:22500797 and REF_RGD_ID:11535033
FKBP1A	Green Monkey	transforming growth factor-beta Smad dependent signaling pathway		ISO	FKBP1A (Homo sapiens)	9068941		RGD	PMID:12809600 and REF_RGD_ID:2298922

Imported Annotations - PID (archival)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
FKBP1A	Green Monkey	activin signaling pathway		ISO	FKBP1A (Homo sapiens)	9068941		PID	PID:200029
FKBP1A	Green Monkey	transforming growth factor-beta Smad dependent signaling pathway		ISO	FKBP1A (Homo sapiens)	9068941		PID	PID:200227

PMID:22301074

FKBP1A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	2	55,170,816 - 55,195,380 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666087	1,575,983 - 1,600,558 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

FKBP1A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	20	1,368,978 - 1,393,054 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	20	1,368,977 - 1,393,164 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	20	1,349,622 - 1,373,698 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	20	1,297,622 - 1,321,745 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	20	1,300,375 - 1,321,745	NCBI
Celera	20	1,445,967 - 1,470,163 (-)	NCBI		Celera
Cytogenetic Map	20	p13	NCBI
HuRef	20	1,302,109 - 1,326,302 (-)	NCBI		HuRef
CHM1_1	20	1,349,285 - 1,373,817 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	20	1,418,161 - 1,442,241 (-)	NCBI		T2T-CHM13v2.0

Fkbp1a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	151,384,403 - 151,403,611 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	151,384,403 - 151,403,612 (+)	Ensembl		GRCm39 Ensembl
GRCm38	2	151,542,483 - 151,561,691 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	151,542,483 - 151,561,692 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	151,368,235 - 151,387,427 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	151,234,062 - 151,253,132 (+)	NCBI		MGSCv36	mm8
Celera	2	157,359,901 - 157,379,075 (+)	NCBI		Celera
Cytogenetic Map	2	G3	NCBI
cM Map	2	74.83	NCBI

Fkbp1a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	160,500,748 - 160,520,492 (+)	NCBI		GRCr8
mRatBN7.2	3	140,040,359 - 140,060,107 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	140,040,278 - 140,060,743 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	143,944,928 - 143,964,668 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	152,528,701 - 152,548,443 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	150,269,170 - 150,288,910 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	147,042,944 - 147,062,725 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	147,042,944 - 147,062,724 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	153,399,455 - 153,418,857 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	141,861,237 - 141,880,797 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	141,766,809 - 141,786,369 (+)	NCBI
Celera	3	138,799,643 - 138,819,482 (+)	NCBI		Celera
Cytogenetic Map	3	q41	NCBI

Fkbp1a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955596	580,106 - 603,255 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955596	580,106 - 606,210 (-)	NCBI	ChiLan1.0	ChiLan1.0

FKBP1A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	21	2,399,937 - 2,432,330 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	20	2,396,766 - 2,426,602 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	20	1,519,330 - 1,548,473 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	20	1,292,519 - 1,298,888 (-)	NCBI	panpan1.1	PanPan1.1	panPan2

FKBP1A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	24	19,618,581 - 19,643,685 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	24	19,618,558 - 19,643,046 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
ROS_Cfam_1.0	24	20,310,591 - 20,335,863 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	24	20,310,075 - 20,335,863 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	24	19,587,096 - 19,612,324 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	24	19,692,087 - 19,717,321 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	24	20,122,927 - 20,148,189 (+)	NCBI		UU_Cfam_GSD_1.0

Fkbp1a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	168,873,992 - 168,880,432 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936485	17,305,376 - 17,311,797 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

FKBP1A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	17	33,910,047 - 33,935,212 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	17	38,470,202 - 38,495,226 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Fkbp1a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624741	2,666,636 - 2,692,938 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624741	2,669,909 - 2,692,959 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in FKBP1A
491 total Variants

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XM_007962759	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007962767	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007962777	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000055	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

XM_007962759 ⟹ XP_007960950

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	2	55,170,865 - 55,195,380 (+)	NCBI
Vero_WHO_p1.0	NW_023666087	1,576,031 - 1,600,558 (+)	NCBI

Sequence:

show sequence

GCGTGCGCGTGCGCAGGCGACGAGCCGAGGGACTAGGCAGAGCGGTGAAACCATCGCCAGGTCGCTGTCGCTCCACGCCGCCCGTCGCGCTGCCCGCCCGCTCAGCGTCCGCCGCCGCCATGGGAGTG
CAGGTGGAAACCATCTCCCCAGGAGACGGGCGCACCTTCCCGAAGCGCGGCCAGACCTGCGTGGTGCACTACACCGTGGCCTTTTTCACAGGGATGCTTGAAGATGGAAAGAAATTTGATTCCTCCCG
GGACAGAAACAAGCCCTTTAAGTTTATGCTAGGCAAGCAGGAGGTGATCCGAGGCTGGGAAGAAGGGGTTGCCCAGATGAGTGTGGGTCAGAGAGCCAAACTGACTATATCTCCAGATTATGCCTATG
GTGCCACTGGGCACCCAGGCATCATCCCACCACATGCCACTCTCGTCTTCGATGTGGAGCTTCTAAAACTGGAATGACAGGAATGGCCTCCTCCCTTAGCTCCCTGTTCTTGGATCTGCCATGGAGGG
ATCTGGTGCCTCCAGACGTGTGCACATGAATCCATGTGGAGCTTTTCCTGGTGTTCCACTCCACTCTGTATAGACATCTGCCCTGACTGAATGTGTTCTGTCACTCAGCTTTGCTTCTGACACCTCCG
TTTCCTCTTCCCCTTTCTCCTCGTATGTGTGTTTACCTAAACTATATGCCATAAACCTCAAGTTATTCATTTTATTTTGTTTTCATTTTGGGGTGAAGATTCAGTTTCAGTCTTTTGGATATAGATTT
CCAGTTAAGTACATGGTCAGGTATTAACAGCACAAGTGATAGGTTAACGTTAGAATAGGAATTGGTGTTGGGGGGGTTGCAAGAATATTTTATTTTAATTTTTTGGATGAAATTTTTATCTATTATAT
ATTAAACATTCTTGCTGCTGCGCTGCAAAGCCATAGCAGATTTGAGGCGCTGTTGAGGACTGAATTATTCTCCAAGTTGGGAGATGTCCTTGGGTTAAATTAAAAGCCCTACCTAAAACTGAGGTGGG
GATGGGGACAGCCTTTGCCTCCACCATTCCCACCCCATCCTCCCCTTAAACCCTCTGCCTTTGAAAGCAGATCATGTTCACTGCGATGCTGGACACTACAGGTATCTGTCCCTGGGCCAGCAGGGACC
TCTGAAGCCTTCTTTGTGGCCTGGCTTATTTTTTTTGTTTTTATTTTTTTTCGTCCTGTGGTTTTTCTAATGGACTTTCAGGAATTTTGTAATCTCATAACTTTCCAAGCTCCACCACTTCCTAAATC
TTAAGAACTTTAATTGACAGTTTCAGTTGAAGGTGCTGTTTGTAGACTTAACACCCAGTGAAAGCCCAGCCATCATGACAAATCCTTGAATGTTCTCTTAAGAAAATGATGCTGGTCATCGCAGCTTC
AGCATCTCCTGTTTTTTGATGCTTGGCACCCTCTGCTGATCTCAGAGTTTCCTGGCTTTTCCTCCCTCAGCCCCTTCTCACCCCTTTGCTGTCCTATGTAGTGATTTGGTGAGAGAAATCGTTGCTGC
CCCCTCCCCCCAGCACCATATATGAGTCTCAAGTTTTATTATTGCAATAAAAGTGCTTTATGCCGGCTTTTCTCA

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RefSeq Acc Id:

XM_007962767 ⟹ XP_007960958

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	2	55,170,816 - 55,195,380 (+)	NCBI
Vero_WHO_p1.0	NW_023666087	1,575,983 - 1,600,558 (+)	NCBI

Sequence:

show sequence

GGGACGTGCGCGCCGTGTGGGGCGCGCACGCAGGACTGGGCGTGAGGGGGCGTGCGCGTGCGCAGGCGACGAGCCGAGGGACTAGGCAGAGCGGTGAAACCATCGCCAGGTCGCTGTCGCTCCACGCC
GCCCGTCGCGCTGCCCGCCCGCTCAGCGTCCGCCGCCGCCATGGGAGTGCAGGTGGAAACCATCTCCCCAGGAGACGGGCGCACCTTCCCGAAGCGCGGCCAGACCTGCGTGGTGCACTACACCGGGA
TGCTTGAAGATGGAAAGAAATTTGATTCCTCCCGGGACAGAAACAAGCCCTTTAAGTTTATGCTAGGCAAGCAGGAGGTGATCCGAGGCTGGGAAGAAGGGGTTGCCCAGATGAGTGTGGGTCAGAGA
GCCAAACTGACTATATCTCCAGATTATGCCTATGGTGCCACTGGGCACCCAGGCATCATCCCACCACATGCCACTCTCGTCTTCGATGTGGAGCTTCTAAAACTGGAATGACAGGAATGGCCTCCTCC
CTTAGCTCCCTGTTCTTGGATCTGCCATGGAGGGATCTGGTGCCTCCAGACGTGTGCACATGAATCCATGTGGAGCTTTTCCTGGTGTTCCACTCCACTCTGTATAGACATCTGCCCTGACTGAATGT
GTTCTGTCACTCAGCTTTGCTTCTGACACCTCCGTTTCCTCTTCCCCTTTCTCCTCGTATGTGTGTTTACCTAAACTATATGCCATAAACCTCAAGTTATTCATTTTATTTTGTTTTCATTTTGGGGT
GAAGATTCAGTTTCAGTCTTTTGGATATAGATTTCCAGTTAAGTACATGGTCAGGTATTAACAGCACAAGTGATAGGTTAACGTTAGAATAGGAATTGGTGTTGGGGGGGTTGCAAGAATATTTTATT
TTAATTTTTTGGATGAAATTTTTATCTATTATATATTAAACATTCTTGCTGCTGCGCTGCAAAGCCATAGCAGATTTGAGGCGCTGTTGAGGACTGAATTATTCTCCAAGTTGGGAGATGTCCTTGGG
TTAAATTAAAAGCCCTACCTAAAACTGAGGTGGGGATGGGGACAGCCTTTGCCTCCACCATTCCCACCCCATCCTCCCCTTAAACCCTCTGCCTTTGAAAGCAGATCATGTTCACTGCGATGCTGGAC
ACTACAGGTATCTGTCCCTGGGCCAGCAGGGACCTCTGAAGCCTTCTTTGTGGCCTGGCTTATTTTTTTTGTTTTTATTTTTTTTCGTCCTGTGGTTTTTCTAATGGACTTTCAGGAATTTTGTAATC
TCATAACTTTCCAAGCTCCACCACTTCCTAAATCTTAAGAACTTTAATTGACAGTTTCAGTTGAAGGTGCTGTTTGTAGACTTAACACCCAGTGAAAGCCCAGCCATCATGACAAATCCTTGAATGTT
CTCTTAAGAAAATGATGCTGGTCATCGCAGCTTCAGCATCTCCTGTTTTTTGATGCTTGGCACCCTCTGCTGATCTCAGAGTTTCCTGGCTTTTCCTCCCTCAGCCCCTTCTCACCCCTTTGCTGTCC
TATGTAGTGATTTGGTGAGAGAAATCGTTGCTGCCCCCTCCCCCCAGCACCATATATGAGTCTCAAGTTTTATTATTGCAATAAAAGTGCTTTATGCCGGCTTTTCTCA

hide sequence

RefSeq Acc Id:

XM_007962777 ⟹ XP_007960968

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	2	55,170,816 - 55,195,380 (+)	NCBI
Vero_WHO_p1.0	NW_023666087	1,575,983 - 1,600,558 (+)	NCBI

Sequence:

show sequence

GGGACGTGCGCGCCGTGTGGGGCGCGCACGCAGGACTGGGCGTGAGGGGGCGTGCGCGTGCGCAGGCGACGAGCCGAGGGACTAGGCAGAGCGGTGAAACCATCGCCAGGTCGCTGTCGCTCCACGCC
GCCCGTCGCGCTGCCCGCCCGCTCAGCGTCCGCCGCCGCCATGGGAGTGCAGGTGGAAACCATCTCCCCAGGAGACGGGCGCACCTTCCCGAAGCGCGGCCAGACCTGCGTGGTGCACTACACCGATG
AGTGTGGGTCAGAGAGCCAAACTGACTATATCTCCAGATTATGCCTATGGTGCCACTGGGCACCCAGGCATCATCCCACCACATGCCACTCTCGTCTTCGATGTGGAGCTTCTAAAACTGGAATGACA
GGAATGGCCTCCTCCCTTAGCTCCCTGTTCTTGGATCTGCCATGGAGGGATCTGGTGCCTCCAGACGTGTGCACATGAATCCATGTGGAGCTTTTCCTGGTGTTCCACTCCACTCTGTATAGACATCT
GCCCTGACTGAATGTGTTCTGTCACTCAGCTTTGCTTCTGACACCTCCGTTTCCTCTTCCCCTTTCTCCTCGTATGTGTGTTTACCTAAACTATATGCCATAAACCTCAAGTTATTCATTTTATTTTG
TTTTCATTTTGGGGTGAAGATTCAGTTTCAGTCTTTTGGATATAGATTTCCAGTTAAGTACATGGTCAGGTATTAACAGCACAAGTGATAGGTTAACGTTAGAATAGGAATTGGTGTTGGGGGGGTTG
CAAGAATATTTTATTTTAATTTTTTGGATGAAATTTTTATCTATTATATATTAAACATTCTTGCTGCTGCGCTGCAAAGCCATAGCAGATTTGAGGCGCTGTTGAGGACTGAATTATTCTCCAAGTTG
GGAGATGTCCTTGGGTTAAATTAAAAGCCCTACCTAAAACTGAGGTGGGGATGGGGACAGCCTTTGCCTCCACCATTCCCACCCCATCCTCCCCTTAAACCCTCTGCCTTTGAAAGCAGATCATGTTC
ACTGCGATGCTGGACACTACAGGTATCTGTCCCTGGGCCAGCAGGGACCTCTGAAGCCTTCTTTGTGGCCTGGCTTATTTTTTTTGTTTTTATTTTTTTTCGTCCTGTGGTTTTTCTAATGGACTTTC
AGGAATTTTGTAATCTCATAACTTTCCAAGCTCCACCACTTCCTAAATCTTAAGAACTTTAATTGACAGTTTCAGTTGAAGGTGCTGTTTGTAGACTTAACACCCAGTGAAAGCCCAGCCATCATGAC
AAATCCTTGAATGTTCTCTTAAGAAAATGATGCTGGTCATCGCAGCTTCAGCATCTCCTGTTTTTTGATGCTTGGCACCCTCTGCTGATCTCAGAGTTTCCTGGCTTTTCCTCCCTCAGCCCCTTCTC
ACCCCTTTGCTGTCCTATGTAGTGATTTGGTGAGAGAAATCGTTGCTGCCCCCTCCCCCCAGCACCATATATGAGTCTCAAGTTTTATTATTGCAATAAAAGTGCTTTATGCCGGCTTTTCTCA

hide sequence


Protein RefSeqs	XP_007960950	(Get FASTA)	NCBI Sequence Viewer
	XP_007960958	(Get FASTA)	NCBI Sequence Viewer
	XP_007960968	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_007960958 ⟸ XM_007962767
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_007960968 ⟸ XM_007962777
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_007960950 ⟸ XM_007962759
- Peptide Label:	isoform X1

Database	Acc Id	Source(s)
NCBI Gene	FKBP1A	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

RGD Manual Annotations

Imported Annotations - PID (archival)

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Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

RGD Manual Annotations

Imported Annotations - PID (archival)