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Pathways
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PATHWAY ONTOLOGY - ANNOTATIONS

The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml).
Term:retinol metabolic pathway
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Accession:PW:0000141 term browser browse the term
Definition:Those reactions involving retinol, a fat-soluble vitamin that is the dietary form of vitamin A and is important for bone growth and in vision. Precursors of retinol such as carotenoid or retinyl esters are derived from diet and are converted to retinal and retinol, respectively.
Synonyms:related_synonym: Retinoid metabolism and transport;   retinol metabolic process
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retinol metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA1 ATP binding cassette subfamily A member 1 ISO RGD PMID:21718801 RGD:6484679 NCBI chr 9:75,948,831...76,096,136
Ensembl chr 9:104,076,516...104,224,188 		JBrowse link
G AKR1B10 aldo-keto reductase family 1 member B10 ISO RGD PMID:16970545 PMID:20709016 RGD:6903952 RGD:6903957 NCBI chr 7:126,486,012...126,499,852
Ensembl chr 7:138,992,835...139,006,003 		JBrowse link
G ALDH1A1 aldehyde dehydrogenase 1 family member A1 ISO SMPDB SMP:00074 NCBI chr 9:51,737,305...51,916,648
Ensembl chr 9:71,680,890...71,814,085 		JBrowse link
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 ISO RGD
SMPDB		 PMID:12547725 RGD:1576367 SMP:00074 NCBI chr15:36,925,443...37,038,288
Ensembl chr15:55,237,101...55,557,168 		JBrowse link
G AWAT1 acyl-CoA wax alcohol acyltransferase 1 ISO SMPDB SMP:00074 NCBI chr  X:59,502,965...59,509,092
Ensembl chr  X:69,562,111...69,568,244 		JBrowse link
G BCO1 beta-carotene oxygenase 1 ISO SMPDB
RGD		 PMID:21569862 PMID:21718801 RGD:6484679 RGD:6903956 SMP:00074 NCBI chr16:61,843,567...61,897,012
Ensembl chr16:81,270,577...81,323,088 		JBrowse link
G CD36 CD36 molecule (CD36 blood group) ISO RGD PMID:21718801 RGD:6484679 NCBI chr 7:72,566,478...72,643,517
Ensembl chr 7:86,265,114...86,305,865 		JBrowse link
G CYP26A1 cytochrome P450 family 26 subfamily A member 1 ISO SMPDB SMP:00074 NCBI chr10:89,817,623...89,822,024
Ensembl chr10:93,330,460...93,334,105 		JBrowse link
G CYP2B6 cytochrome P450 family 2 subfamily B member 6 ISO SMPDB SMP:00074 NCBI chr19:38,003,083...38,028,980
Ensembl chr19:46,509,370...46,534,672 		JBrowse link
G CYP3A4 cytochrome P450 family 3 subfamily A member 4 ISO SMPDB SMP:00074 NCBI chr 7:91,797,037...91,824,696
Ensembl chr 7:105,230,666...105,258,401 		JBrowse link
G CYP3A43 cytochrome P450 family 3 subfamily A member 43 ISO SMPDB SMP:00074 NCBI chr 7:91,862,437...91,903,033
Ensembl chr 7:105,296,111...105,335,958 		JBrowse link
G CYP3A5 cytochrome P450 family 3 subfamily A member 5 ISO SMPDB SMP:00074 NCBI chr 7:91,621,561...91,654,164
Ensembl chr 7:105,123,437...105,155,322 		JBrowse link
G DGAT1 diacylglycerol O-acyltransferase 1 ISO SMPDB SMP:00074 NCBI chr 8:141,079,948...141,090,619
Ensembl chr 8:144,064,587...144,080,155 		JBrowse link
G DHRS3 dehydrogenase/reductase 3 ISO SMPDB SMP:00074 NCBI chr 1:11,319,109...11,370,463
Ensembl chr 1:12,533,696...12,584,381 		JBrowse link
G DHRS4 dehydrogenase/reductase 4 ISO SMPDB SMP:00074 Ensembl chr14:22,831,756...22,846,695 JBrowse link
G DHRS9 dehydrogenase/reductase 9 ISO SMPDB SMP:00074 NCBI chr2B:56,347,489...56,376,463
Ensembl chr2B:173,811,932...173,842,816 		JBrowse link
G DNAJB11 DnaJ heat shock protein family (Hsp40) member B11 ISO SMPDB SMP:00074 NCBI chr 3:183,601,386...183,617,013
Ensembl chr 3:192,069,326...192,084,943 		JBrowse link
G ERP29 endoplasmic reticulum protein 29 ISO SMPDB SMP:00074 NCBI chr12:109,610,692...109,620,390
Ensembl chr12:113,004,125...113,013,674 		JBrowse link
G HSP90B1 heat shock protein 90 beta family member 1 ISO SMPDB SMP:00074 NCBI chr12:101,506,845...101,524,407
Ensembl chr12:104,901,997...104,919,329 		JBrowse link
G HSPA5 heat shock protein family A (Hsp70) member 5 ISO SMPDB SMP:00074 NCBI chr 9:96,351,645...96,356,761
Ensembl chr 9:124,865,211...124,870,458 		JBrowse link
G HYOU1 hypoxia up-regulated 1 ISO SMPDB SMP:00074 NCBI chr11:113,882,418...113,895,438
Ensembl chr11:117,812,975...117,824,005 		JBrowse link
G LOC100971436 alcohol dehydrogenase 1A ISO SMPDB SMP:00074 NCBI chr 4:91,697,663...91,712,314
Ensembl chr 4:102,359,419...102,374,101 		JBrowse link
G LOC100993654 pancreatic lipase-related protein 2 ISO RGD PMID:21718801 RGD:6484679 NCBI chr10:113,203,170...113,216,890
Ensembl chr10:116,634,538...116,658,075 		JBrowse link
G LRAT lecithin retinol acyltransferase ISO SMPDB
RGD		 PMID:21718801 RGD:6484679 SMP:00074 NCBI chr 4:147,110,568...147,119,706
Ensembl chr 4:158,928,607...158,937,747 		JBrowse link
G PDIA2 protein disulfide isomerase family A member 2 ISO SMPDB SMP:00074 Ensembl chr16:273,764...277,914 JBrowse link
G PDIA4 protein disulfide isomerase family A member 4 ISO SMPDB SMP:00074 NCBI chr 7:140,731,333...140,757,599
Ensembl chr 7:153,210,553...153,236,721 		JBrowse link
G PDIA6 protein disulfide isomerase family A member 6 ISO SMPDB SMP:00074 NCBI chr2A:10,781,671...10,809,235
Ensembl chr2A:10,934,756...10,986,200 		JBrowse link
G PLB1 phospholipase B1 ISO RGD PMID:8117729 PMID:21718801 RGD:6484679 RGD:6903951 NCBI chr2A:28,502,449...28,650,348
Ensembl chr2A:28,584,636...28,730,640 		JBrowse link
G PNLIP pancreatic lipase ISO RGD PMID:21718801 RGD:6484679 NCBI chr10:113,067,443...113,158,473
Ensembl chr10:116,568,273...116,589,729 		JBrowse link
G PNPLA4 patatin like phospholipase domain containing 4 ISO SMPDB SMP:00074 Ensembl chr  X:7,756,047...7,786,634 JBrowse link
G PPIB peptidylprolyl isomerase B ISO SMPDB SMP:00074 NCBI chr15:43,108,139...43,115,470
Ensembl chr15:61,400,272...61,406,758 		JBrowse link
G RBP2 retinol binding protein 2 ISO RGD PMID:21718801 RGD:6484679 NCBI chr 3:136,488,536...136,513,337
Ensembl chr 3:144,089,322...144,112,840 		JBrowse link
G RDH11 retinol dehydrogenase 11 ISO SMPDB SMP:00074 NCBI chr14:48,256,951...48,275,831
Ensembl chr14:67,135,366...67,154,286 		JBrowse link
G RDH12 retinol dehydrogenase 12 ISO SMPDB SMP:00074 NCBI chr14:48,297,854...48,314,502
Ensembl chr14:67,180,696...67,192,345 		JBrowse link
G RDH16 retinol dehydrogenase 16 ISO SMPDB SMP:00074 NCBI chr12:31,958,385...31,966,319
Ensembl chr12:32,212,746...32,219,624 		JBrowse link
G RDH8 retinol dehydrogenase 8 ISO SMPDB SMP:00074 NCBI chr19:9,565,918...9,575,017
Ensembl chr19:10,226,185...10,235,114 		JBrowse link
G RETSAT retinol saturase ISO SMPDB SMP:00074 NCBI chr2A:85,394,700...85,407,252
Ensembl chr2A:86,946,460...86,958,962 		JBrowse link
G RPE65 retinoid isomerohydrolase RPE65 ISO SMPDB SMP:00074 NCBI chr 1:67,666,784...67,687,891
Ensembl chr 1:69,623,775...69,644,904 		JBrowse link
G SCARB1 scavenger receptor class B member 1 ISO RGD PMID:21718801 RGD:6484679 NCBI chr12:122,293,803...122,455,314
Ensembl chr12:126,659,532...126,694,767 		JBrowse link
G SDF2L1 stromal cell derived factor 2 like 1 ISO SMPDB SMP:00074 NCBI chr22:3,764,899...3,766,932
Ensembl chr22:20,248,566...20,250,607 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  pathway 4064
    classic metabolic pathway 1016
      metabolic pathway pertinent to the brain 91
        retinoid metabolic pathway 57
          retinol metabolic pathway 40
Path 2
Term Annotations click to browse term
  pathway 4064
    regulatory pathway 2507
      homeostasis pathway 1306
        organic chemical homeostasis pathway 364
          vitamin homeostasis 100
            vitamin A homeostasis 100
              retinoid metabolic pathway 57
                retinol metabolic pathway 40
paths to the root