CYP3A5 (cytochrome P450 family 3 subfamily A member 5) - Rat Genome Database

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Gene: CYP3A5 (cytochrome P450 family 3 subfamily A member 5) Pan paniscus
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Symbol: CYP3A5
Name: cytochrome P450 family 3 subfamily A member 5
RGD ID: 11997830
Description: ENCODES a protein that exhibits estrogen 16-alpha-hydroxylase activity (inferred); heme binding (inferred); iron ion binding (inferred); INVOLVED IN female pregnancy (ortholog); response to dexamethasone (ortholog); response to estradiol (ortholog); PARTICIPATES IN artemether pharmacokinetics pathway; axitinib pharmacokinetics pathway; carbamazepine pharmacokinetics pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); autism spectrum disorder (ortholog); B-lymphoblastic leukemia/lymphoma (ortholog); FOUND IN endoplasmic reticulum (inferred); endoplasmic reticulum membrane (inferred); intracellular membrane-bounded organelle (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: cytochrome P450 3A5; LOC100976333
RGD Orthologs
Human
Mouse
Rat
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26117,505,661 - 117,538,312 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan17165,770,036 - 165,802,947 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0791,621,561 - 91,654,164 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17105,123,437 - 105,155,322 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7105,123,437 - 105,155,322 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
CYP3A5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26117,505,661 - 117,538,312 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan17165,770,036 - 165,802,947 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0791,621,561 - 91,654,164 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17105,123,437 - 105,155,322 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7105,123,437 - 105,155,322 (-)Ensemblpanpan1.1panPan2
CYP3A5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38799,648,194 - 99,679,996 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl799,648,194 - 99,679,996 (-)EnsemblGRCh38hg38GRCh38
GRCh37799,245,817 - 99,277,619 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36799,083,753 - 99,115,557 (-)NCBINCBI36Build 36hg18NCBI36
Build 34798,890,467 - 98,922,257NCBI
Celera793,980,042 - 94,011,861 (-)NCBICelera
Cytogenetic Map7q22.1NCBI
HuRef793,882,179 - 93,914,147 (-)NCBIHuRef
CHM1_1799,175,907 - 99,207,720 (-)NCBICHM1_1
T2T-CHM13v2.07100,887,521 - 100,919,516 (-)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v2798,605,608 - 98,637,429 (-)NCBI
Cyp3a11
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395145,791,417 - 145,816,664 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5145,791,236 - 145,816,774 (-)EnsemblGRCm39 Ensembl
GRCm385145,854,607 - 145,879,854 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5145,854,426 - 145,879,964 (-)EnsemblGRCm38mm10GRCm38
MGSCv375146,666,183 - 146,691,430 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365146,158,841 - 146,184,088 (-)NCBIMGSCv36mm8
Celera5143,836,316 - 143,861,583 (-)NCBICelera
Cytogenetic Map5G2NCBI
cM Map585.17NCBI
Cyp3a9
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81221,919,955 - 21,960,160 (-)NCBIGRCr8
mRatBN7.21216,806,222 - 16,846,428 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1216,806,207 - 16,846,422 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1217,636,912 - 17,677,023 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01218,260,644 - 18,300,755 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01217,314,042 - 17,354,154 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01219,074,288 - 19,114,491 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1219,074,583 - 19,114,399 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01221,132,926 - 21,173,248 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41217,164,384 - 17,204,589 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11217,153,354 - 17,193,208 (+)NCBI
Celera1218,744,706 - 18,784,438 (-)NCBICelera
Cytogenetic Map12q11NCBI
CYP3A22
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl36,615,343 - 6,822,817 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.136,617,256 - 6,665,179 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
CYP3A5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12813,473,649 - 13,517,905 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2813,491,483 - 13,519,507 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660702,792,815 - 2,818,567 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSPPAT00000054914   ⟹   ENSPPAP00000032048
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl7105,123,437 - 105,155,322 (-)Ensembl
Ensembl Acc Id: ENSPPAT00000054923   ⟹   ENSPPAP00000032057
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl7105,123,548 - 105,128,971 (-)Ensembl
Ensembl Acc Id: ENSPPAT00000054927   ⟹   ENSPPAP00000032060
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl7105,151,824 - 105,155,192 (-)Ensembl
RefSeq Acc Id: XM_003815709   ⟹   XP_003815757
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v26117,505,661 - 117,538,291 (-)NCBI
NHGRI_mPanPan17165,770,036 - 165,802,947 (-)NCBI
Mhudiblu_PPA_v0791,621,561 - 91,653,840 (-)NCBI
PanPan1.17105,123,437 - 105,155,322 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008968740   ⟹   XP_008966988
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v26117,529,304 - 117,538,312 (-)NCBI
NHGRI_mPanPan17165,793,939 - 165,802,947 (-)NCBI
Mhudiblu_PPA_v0791,640,319 - 91,654,164 (-)NCBI
PanPan1.17105,146,976 - 105,155,322 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003815757 (Get FASTA)   NCBI Sequence Viewer  
  XP_008966988 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000032048
  ENSPPAP00000032048.1
  ENSPPAP00000032057.1
  ENSPPAP00000032060.1
RefSeq Acc Id: XP_003815757   ⟸   XM_003815709
- Peptide Label: isoform X1
- UniProtKB: A0A2R9BZX8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008966988   ⟸   XM_008968740
- Peptide Label: isoform X2
- Sequence:
Ensembl Acc Id: ENSPPAP00000032057   ⟸   ENSPPAT00000054923
Ensembl Acc Id: ENSPPAP00000032048   ⟸   ENSPPAT00000054914
Ensembl Acc Id: ENSPPAP00000032060   ⟸   ENSPPAT00000054927


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000038928 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000054914.1 UniProtKB/TrEMBL
  ENSPPAT00000054923.1 UniProtKB/TrEMBL
  ENSPPAT00000054927.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.630.10 UniProtKB/TrEMBL
InterPro Cyt_P450 UniProtKB/TrEMBL
  Cyt_P450_CS UniProtKB/TrEMBL
  Cyt_P450_E_CYP3A UniProtKB/TrEMBL
  Cyt_P450_E_grp-II UniProtKB/TrEMBL
  Cyt_P450_E_grp-IV UniProtKB/TrEMBL
  Cyt_P450_sf UniProtKB/TrEMBL
  Cytochrome_P450_3A UniProtKB/TrEMBL
KEGG Report pps:100976333 UniProtKB/TrEMBL
NCBI Gene LOC100976333 ENTREZGENE
PANTHER CYTOCHROME P450 3A5 UniProtKB/TrEMBL
  CYTOCHROME P450 FAMILY 3 UniProtKB/TrEMBL
Pfam p450 UniProtKB/TrEMBL
PRINTS EP450II UniProtKB/TrEMBL
  EP450IICYP3A UniProtKB/TrEMBL
  EP450IV UniProtKB/TrEMBL
  P450 UniProtKB/TrEMBL
PROSITE CYTOCHROME_P450 UniProtKB/TrEMBL
Superfamily-SCOP SSF48264 UniProtKB/TrEMBL
UniProt A0A2R9BQW4_PANPA UniProtKB/TrEMBL
  A0A2R9BRJ8_PANPA UniProtKB/TrEMBL
  A0A2R9BZX8 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:83023 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-02-25 CYP3A5  cytochrome P450 family 3 subfamily A member 5  LOC100976333  cytochrome P450 3A5  Symbol and/or name change 5135510 APPROVED