Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:pleural effusion
go back to main search page
Accession:MP:0010334 term browser browse the term
Definition:accumulation of excess fluid in the pleural cavity
Synonyms:exact_synonym: hydrothorax


show annotations for term's descendants           Sort by:
pleural effusion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A1cf APOBEC1 complementation factor IAGP MGI PMID:17190866 PMID:20644257 NCBI chr19:31,846,156...31,929,765
Ensembl chr19:31,846,164...31,926,395 		JBrowse link
G Cd47 CD47 antigen (Rh-related antigen, integrin-associated signal transducer) IAGP MGI PMID:18453616 NCBI chr16:49,671,691...49,732,799
Ensembl chr16:49,620,896...49,735,373 		JBrowse link
G Cdkn2a cyclin dependent kinase inhibitor 2A IAGP MGI PMID:18328429 NCBI chr 4:89,192,710...89,212,856
Ensembl chr 4:89,192,708...89,212,890 		JBrowse link
G Dnm1l dynamin 1-like IAGP MGI PMID:20585624 NCBI chr16:16,130,092...16,176,863
Ensembl chr16:16,130,094...16,176,823 		JBrowse link
G E2f3 E2F transcription factor 3 IAGP MGI PMID:11909960 NCBI chr13:30,090,558...30,171,172
Ensembl chr13:30,090,558...30,170,046 		JBrowse link
G Foxp3 forkhead box P3 IAGP MGI PMID:2053595 NCBI chr  X:7,445,915...7,461,482
Ensembl chr  X:7,439,883...7,461,484 		JBrowse link
G H2-Ab1 histocompatibility 2, class II antigen A, beta 1 IAGP MGI PMID:14764740 NCBI chr17:34,482,201...34,488,392
Ensembl chr17:34,476,663...34,488,393 		JBrowse link
G Ighmbp2 immunoglobulin mu DNA binding protein 2 IAGP MGI PMID:15069027 NCBI chr19:3,309,076...3,333,011
Ensembl chr19:3,309,076...3,333,017 		JBrowse link
G Itgb1 integrin beta 1 (fibronectin receptor beta) IAGP MGI PMID:11884376 NCBI chr 8:129,412,135...129,460,060
Ensembl chr 8:129,412,135...129,459,681 		JBrowse link
G Ivns1abp influenza virus NS1A binding protein IAGP MGI PMID:15485691 NCBI chr 1:151,220,237...151,240,196
Ensembl chr 1:151,220,228...151,240,173 		JBrowse link
G Mgrn1 mahogunin, ring finger 1 IAGP MGI PMID:17075880 NCBI chr16:4,703,964...4,756,160
Ensembl chr16:4,704,113...4,756,160 		JBrowse link
G Mtor mechanistic target of rapamycin kinase IAGP MGI PMID:20644257 NCBI chr 4:148,533,039...148,642,142
Ensembl chr 4:148,533,068...148,642,140 		JBrowse link
G Myl2 myosin, light polypeptide 2, regulatory, cardiac, slow IAGP MGI PMID:11884376 NCBI chr 5:122,230,787...122,251,536
Ensembl chr 5:122,239,014...122,251,535 		JBrowse link
G Nf1 neurofibromin 1 IAGP MGI PMID:7926784 NCBI chr11:79,223,541...79,472,435
Ensembl chr11:79,230,519...79,472,438 		JBrowse link
G Nf2 neurofibromin 2 IAGP MGI PMID:18328429 NCBI chr11:4,715,845...4,799,544
Ensembl chr11:4,715,845...4,799,536 		JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 IAGP MGI PMID:28951494 NCBI chr18:35,866,731...35,873,607
Ensembl chr18:35,866,732...35,873,607 		JBrowse link
G Trp53 transformation related protein 53 IAGP MGI PMID:18328429 NCBI chr11:69,471,174...69,482,699
Ensembl chr11:69,471,185...69,482,699 		JBrowse link
chylothorax term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Efnb2 ephrin B2 IAGP MGI PMID:15687262 NCBI chr 8:8,667,235...8,711,242
Ensembl chr 8:8,667,434...8,711,242 		JBrowse link
G Elk3 ELK3, member of ETS oncogene family IAGP MGI PMID:11566878 PMID:25203538 NCBI chr10:93,083,277...93,147,021
Ensembl chr10:93,083,276...93,146,997 		JBrowse link
G Itga9 integrin alpha 9 IAGP MGI PMID:10866676 NCBI chr 9:118,435,777...118,730,071
Ensembl chr 9:118,435,758...118,730,071 		JBrowse link
G Mdfic MyoD family inhibitor domain containing IAGP MGI PMID:35235341 NCBI chr 6:15,720,660...15,802,168
Ensembl chr 6:15,720,660...15,802,168 		JBrowse link
G Prox1 prospero homeobox 1 IAGP MGI PMID:16170315 NCBI chr 1:189,850,232...189,903,024
Ensembl chr 1:189,850,232...189,902,911 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 16756
    respiratory system phenotype 1843
      abnormal respiratory system physiology 1101
        pleural effusion 22
          chylothorax 5
Path 2
Term Annotations click to browse term
  mammalian phenotype 16756
    homeostasis/metabolism phenotype 7731
      abnormal homeostasis 6882
        abnormal fluid regulation 1025
          effusion 217
            pleural effusion 22
              chylothorax 5
paths to the root