Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:RNA polymerase activity
go back to main search page
Accession:GO:0097747 term browser browse the term
Definition:Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1); the synthesis of RNA from ribonucleotide triphosphates in the presence of a nucleic acid template.


show annotations for term's descendants           Sort by:
DNA primase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Polrmt RNA polymerase mitochondrial enables ISO (PMID:18685103) RGD PMID:18685103 NCBI chr 7:9,959,532...9,969,791
Ensembl chr 7:9,959,576...9,969,791 		JBrowse link
G Prim1 DNA primase subunit 1 enables NAS
ISO		 (PMID:24043831), (PMID:26975377)
(MGI:6478526|PMID:8026492)		 RGD PMID:8026492 PMID:24043831 PMID:26975377 PMID:9116489 MGI:6478526, RGD:724584 NCBI chr 7:446,342...462,526
Ensembl chr 7:431,805...462,526 		JBrowse link
G Primpol primase and DNA directed polymerase enables ISO
IBA		 (MGI:6393030|PMID:29073063)
(PMID:24126761), (PMID:24207056), (PMID:24240614), (PMID:24267451), (PMID:24682820), (PMID:28534480), (PMID:29608762), (PMID:30478192)
GO_REF:0000033		 RGD
GO_Central		 PMID:24126761 PMID:24207056 PMID:24240614 PMID:24267451 PMID:24682820 More... GO_REF:0000033 MGI:6393030 NCBI chr16:45,681,252...45,715,758
Ensembl chr16:45,681,326...45,715,565 		JBrowse link
DNA-directed 5'-3' RNA polymerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crcp CGRP receptor component enables ISO
ISS		 (PMID:12482973)
GO_REF:0000024		 RGD
UniProt		 PMID:12482973 GO_REF:0000024 NCBI chr12:26,623,968...26,659,756
Ensembl chr12:26,623,976...26,768,225 		JBrowse link
G LOC120098305 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like enables IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr18:1,257,666...1,258,121
Ensembl chr18:1,257,666...1,258,121 		JBrowse link
G Polr1a RNA polymerase I subunit A contributes_to
enables		 IDA
ISO		 (PMID:34671025), (PMID:36271492) RGD PMID:34671025 PMID:36271492 PMID:9422795 RGD:2312782 NCBI chr 4:103,950,051...104,014,022
Ensembl chr 4:103,950,051...104,014,020 		JBrowse link
G Polr1b RNA polymerase I subunit B contributes_to
enables		 IDA
IEA
ISO		 GO_REF:0000003
(PMID:34671025), (PMID:36271492)		 UniProt
RGD		 PMID:34671025 PMID:36271492 PMID:9422795 GO_REF:0000003, RGD:2312782 NCBI chr 3:116,333,910...116,358,385
Ensembl chr 3:116,333,889...116,358,379 		JBrowse link
G Polr1d RNA polymerase I and III subunit D enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:7,970,592...8,004,157
Ensembl chr12:7,970,595...8,005,624 		JBrowse link
G Polr1h RNA polymerase I subunit H enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:1,594,936...1,598,854
Ensembl chr20:1,594,936...1,598,854 		JBrowse link
G Polr2a RNA polymerase II subunit A enables ISO (PMID:23748380), (PMID:9852112) RGD PMID:9852112 PMID:23748380 NCBI chr10:54,452,438...54,478,486
Ensembl chr10:54,452,441...54,478,455 		JBrowse link
G Polr2b RNA polymerase II subunit B enables ISO (PMID:23748380), (PMID:9852112) RGD PMID:9852112 PMID:23748380 NCBI chr14:30,797,228...30,834,916
Ensembl chr14:30,797,228...30,834,916 		JBrowse link
G Polr2e RNA polymerase II, I and III subunit E enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:9,666,695...9,670,638
Ensembl chr 7:9,666,716...9,670,643 		JBrowse link
G Polr2f RNA polymerase II, I and III subunit F TAS RGD PMID:10393248 RGD:1299534 NCBI chr 7:110,712,528...110,724,234
Ensembl chr 7:110,712,572...110,724,234 		JBrowse link
G Polr2i RNA polymerase II subunit I contributes_to IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:85,483,515...85,484,952
Ensembl chr 1:85,483,515...85,484,952 		JBrowse link
G Polr2k-ps2 RNA polymerase II, I and III subunit K, pseudogene 2 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:208,943,604...208,944,098
Ensembl chr 1:208,943,798...208,944,121
Ensembl chr 1:208,943,798...208,944,121 		JBrowse link
G Polr2sl1 RNA polymerase II, I and III subunit like 1 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:5,743,067...5,743,270
Ensembl chr 4:5,743,067...5,743,270 		JBrowse link
G Polr3a RNA polymerase III subunit A enables ISO (PMID:34675218) RGD PMID:34675218 NCBI chr16:49,178...88,178
Ensembl chr16:49,521...88,172 		JBrowse link
G Polr3b RNA polymerase III subunit B enables ISO (PMID:34675218) RGD PMID:34675218 NCBI chr 7:19,039,179...19,142,450
Ensembl chr 7:19,038,552...19,142,598 		JBrowse link
G Polr3h RNA polymerase III subunit H enables ISO (PMID:12391170) RGD PMID:12391170 NCBI chr 7:113,429,434...113,439,743
Ensembl chr 7:113,429,451...113,439,778 		JBrowse link
G Polrmt RNA polymerase mitochondrial enables ISO
IBA		 (PMID:21278163)
GO_REF:0000033		 RGD
GO_Central		 PMID:21278163 GO_REF:0000033 NCBI chr 7:9,959,532...9,969,791
Ensembl chr 7:9,959,576...9,969,791 		JBrowse link
RNA polymerase I activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC109542.1 contributes_to IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 1:196,570,210...196,573,077 JBrowse link
G Polr1a RNA polymerase I subunit A enables
contributes_to		 ISO
IBA
IEA		 (PMID:23782956)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:23782956 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:103,950,051...104,014,022
Ensembl chr 4:103,950,051...104,014,020 		JBrowse link
G Polr1b RNA polymerase I subunit B contributes_to IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:116,333,910...116,358,385
Ensembl chr 3:116,333,889...116,358,379 		JBrowse link
G Polr1c RNA polymerase I and III subunit C contributes_to IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:14,735,740...14,739,852
Ensembl chr 9:14,735,714...14,739,852 		JBrowse link
G Polr1h RNA polymerase I subunit H contributes_to IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:1,594,936...1,598,854
Ensembl chr20:1,594,936...1,598,854 		JBrowse link
G Polr2e RNA polymerase II, I and III subunit E contributes_to IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:9,666,695...9,670,638
Ensembl chr 7:9,666,716...9,670,643 		JBrowse link
G Polr2f RNA polymerase II, I and III subunit F contributes_to IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:110,712,528...110,724,234
Ensembl chr 7:110,712,572...110,724,234 		JBrowse link
G Polr2h RNA polymerase II, I and III subunit H contributes_to IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:80,192,017...80,197,468
Ensembl chr11:80,192,032...80,197,515
Ensembl chr10:80,192,032...80,197,515 		JBrowse link
G Polr2k RNA polymerase II, I and III subunit K contributes_to IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:67,347,118...67,359,466
Ensembl chr 7:67,356,113...67,357,668 		JBrowse link
G Polr2l RNA polymerase II, I and III subunit L contributes_to IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:196,570,051...196,572,060 JBrowse link
RNA polymerase II activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC109542.1 contributes_to IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 1:196,570,210...196,573,077 JBrowse link
G Polr2a RNA polymerase II subunit A contributes_to IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:54,452,438...54,478,486
Ensembl chr10:54,452,441...54,478,455 		JBrowse link
G Polr2b RNA polymerase II subunit B contributes_to IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:30,797,228...30,834,916
Ensembl chr14:30,797,228...30,834,916 		JBrowse link
G Polr2c RNA polymerase II subunit C contributes_to IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:10,158,153...10,164,935
Ensembl chr19:10,157,823...10,164,945 		JBrowse link
G Polr2e RNA polymerase II, I and III subunit E contributes_to IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:9,666,695...9,670,638
Ensembl chr 7:9,666,716...9,670,643 		JBrowse link
G Polr2f RNA polymerase II, I and III subunit F contributes_to IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:110,712,528...110,724,234
Ensembl chr 7:110,712,572...110,724,234 		JBrowse link
G Polr2h RNA polymerase II, I and III subunit H contributes_to IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:80,192,017...80,197,468
Ensembl chr11:80,192,032...80,197,515
Ensembl chr10:80,192,032...80,197,515 		JBrowse link
G Polr2j RNA polymerase II subunit J contributes_to IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:20,543,038...20,548,590
Ensembl chr12:20,543,038...20,548,594 		JBrowse link
G Polr2k RNA polymerase II, I and III subunit K contributes_to IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:67,347,118...67,359,466
Ensembl chr 7:67,356,113...67,357,668 		JBrowse link
G Polr2l RNA polymerase II, I and III subunit L contributes_to IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:196,570,051...196,572,060 JBrowse link
RNA polymerase III activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC109542.1 contributes_to IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 1:196,570,210...196,573,077 JBrowse link
G Polr1c RNA polymerase I and III subunit C contributes_to IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:14,735,740...14,739,852
Ensembl chr 9:14,735,714...14,739,852 		JBrowse link
G Polr2e RNA polymerase II, I and III subunit E contributes_to IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:9,666,695...9,670,638
Ensembl chr 7:9,666,716...9,670,643 		JBrowse link
G Polr2f RNA polymerase II, I and III subunit F contributes_to IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:110,712,528...110,724,234
Ensembl chr 7:110,712,572...110,724,234 		JBrowse link
G Polr2h RNA polymerase II, I and III subunit H contributes_to IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:80,192,017...80,197,468
Ensembl chr11:80,192,032...80,197,515
Ensembl chr10:80,192,032...80,197,515 		JBrowse link
G Polr2k RNA polymerase II, I and III subunit K contributes_to IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:67,347,118...67,359,466
Ensembl chr 7:67,356,113...67,357,668 		JBrowse link
G Polr2l RNA polymerase II, I and III subunit L contributes_to IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:196,570,051...196,572,060 JBrowse link
G Polr3a RNA polymerase III subunit A contributes_to IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:49,178...88,178
Ensembl chr16:49,521...88,172 		JBrowse link
G Polr3b RNA polymerase III subunit B contributes_to IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:19,039,179...19,142,450
Ensembl chr 7:19,038,552...19,142,598 		JBrowse link
G Polr3k RNA polymerase III subunit K contributes_to IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:168,982,846...168,987,043
Ensembl chr 3:168,982,812...168,987,040 		JBrowse link
RNA-dependent RNA polymerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Polr2a RNA polymerase II subunit A enables ISO (PMID:23395899) RGD PMID:23395899 NCBI chr10:54,452,438...54,478,486
Ensembl chr10:54,452,441...54,478,455 		JBrowse link
G Polr2b RNA polymerase II subunit B enables IEA
ISO		 GO_REF:0000107
(PMID:23395899)		 Ensembl
RGD		 PMID:23395899 GO_REF:0000107 NCBI chr14:30,797,228...30,834,916
Ensembl chr14:30,797,228...30,834,916 		JBrowse link
G Tert telomerase reverse transcriptase enables ISO (PMID:19701182) RGD PMID:19701182 NCBI chr 1:29,637,213...29,659,561
Ensembl chr 1:29,637,506...29,659,561 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 20483
    catalytic activity 6036
      catalytic activity, acting on a nucleic acid 630
        catalytic activity, acting on RNA 396
          RNA polymerase activity 28
            3'-5' RNA polymerase activity 0
            5'-3' RNA polymerase activity + 28
Path 2
Term Annotations click to browse term
  molecular_function 20483
    catalytic activity 6036
      transferase activity 2397
        transferase activity, transferring phosphorus-containing groups 971
          nucleotidyltransferase activity 143
            RNA polymerase activity 28
              3'-5' RNA polymerase activity 0
              5'-3' RNA polymerase activity + 28
paths to the root