Gene: Polr2e (RNA polymerase II subunit E) Rattus norvegicus
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Symbol: Polr2e
Name: RNA polymerase II subunit E
Description: ENCODES a protein that exhibits DNA binding (inferred); DNA-directed 5'-3' RNA polymerase activity (inferred); INVOLVED IN transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription pathway; RNA polymerase III transcription pathway; ASSOCIATED WITH Peutz-Jeghers syndrome (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase II, core complex (ortholog); INTERACTS WITH 2,4-dibromophenyl 2,4,5-tribromophenyl ether; bisphenol A; 1-nitropyrene (ortholog)
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: DNA-directed RNA polymerase II subunit E; DNA-directed RNA polymerases I, II, and III subunit RPABC1; LOC690966; polymerase (RNA) II (DNA directed) polypeptide E; polymerase (RNA) II (DNA directed) polypeptide E, 25kDa; polymerase (RNA) II subunit E; RNA polymerases I, II, and III subunit ABC1; RPB5; RPB5 homolog; similar to DNA-directed RNA polymerase II 23 kDa polypeptide (RPB25) (RPB5) (RPABC1)
Orthologs:
Homo sapiens (human) : POLR2E (RNA polymerase II subunit E)  HGNC  Alliance
Mus musculus (house mouse) : Polr2e (polymerase (RNA) II (DNA directed) polypeptide E)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Polr2e (RNA polymerase II subunit E)
Pan paniscus (bonobo/pygmy chimpanzee) : POLR2E (RNA polymerase II subunit E)
Canis lupus familiaris (dog) : POLR2E (RNA polymerase II subunit E)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Polr2e (RNA polymerase II subunit E)
Sus scrofa (pig) : POLR2E (RNA polymerase II subunit E)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0712,532,785 - 12,536,797 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0712,702,927 - 12,706,900 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4711,179,283 - 11,183,205 (+)NCBIRGSC3.4rn4RGSC3.4
Celera77,842,509 - 7,846,431 (+)NCBICelera
Cytogenetic Map7q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Polr2e
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1589817
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2019-01-30
Status: ACTIVE