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Gene: Polr2e (RNA polymerase II subunit E) Rattus norvegicus
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Symbol: Polr2e
Name: RNA polymerase II subunit E
Description: Predicted to contribute to RNA polymerase I activity; RNA polymerase II activity; and RNA polymerase III activity. Predicted to be involved in transcription by RNA polymerase II. Predicted to localize to the RNA polymerase I complex; RNA polymerase II, core complex; and RNA polymerase III complex. Orthologous to human POLR2E (RNA polymerase II subunit E); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription pathway; RNA polymerase III transcription pathway; INTERACTS WITH 2,4-dibromophenyl 2,4,5-tribromophenyl ether; bisphenol A; 1-nitropyrene (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: DNA-directed RNA polymerase II subunit E; DNA-directed RNA polymerases I, II, and III subunit RPABC1; LOC690966; polymerase (RNA) II (DNA directed) polypeptide E; polymerase (RNA) II (DNA directed) polypeptide E, 25kDa; polymerase (RNA) II subunit E; RNA polymerases I, II, and III subunit ABC1; RPB5; RPB5 homolog; similar to DNA-directed RNA polymerase II 23 kDa polypeptide (RPB25) (RPB5) (RPABC1)
Orthologs:
Homo sapiens (human) : POLR2E (RNA polymerase II subunit E)  HGNC  Alliance
Mus musculus (house mouse) : Polr2e (polymerase (RNA) II (DNA directed) polypeptide E)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Polr2e (RNA polymerase II subunit E)
Pan paniscus (bonobo/pygmy chimpanzee) : POLR2E (RNA polymerase II subunit E)
Canis lupus familiaris (dog) : POLR2E (RNA polymerase II subunit E)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Polr2e (RNA polymerase II subunit E)
Sus scrofa (pig) : POLR2E (RNA polymerase II subunit E)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0712,532,785 - 12,536,797 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl712,532,895 - 12,536,791 (+)Ensembl
Rnor_5.0712,702,927 - 12,706,900 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4711,179,283 - 11,183,205 (+)NCBIRGSC3.4rn4RGSC3.4
Celera77,842,509 - 7,846,431 (+)NCBICelera
Cytogenetic Map7q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Polr2e
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1589817
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.