Imported Disease Annotations - MGIObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Polr3h | Rat | primary ovarian insufficiency | | ISS | Polr3h (Mus musculus) | 13592920 | | MouseDO | | |
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Imported Disease Annotations - MGIObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Polr3h | Rat | primary ovarian insufficiency | | ISS | Polr3h (Mus musculus) | 13592920 | | MouseDO | | |
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# | Reference Title | Reference Citation |
1. | Cell growth- and differentiation-dependent regulation of RNA polymerase III transcription. | Dumay-Odelot H, etal., Cell Cycle. 2010 Sep 15;9(18):3687-99. Epub 2010 Sep 1. |
2. | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
3. | Rat ISS GO annotations from GOA human gene data--August 2006 | GOA data from the GO Consortium |
4. | Characterization of human RNA polymerase III identifies orthologues for Saccharomyces cerevisiae RNA polymerase III subunits. | Hu P, etal., Mol Cell Biol. 2002 Nov;22(22):8044-55. |
5. | Rat ISS GO annotations from MGI mouse gene data--August 2006 | MGD data from the GO Consortium |
6. | KEGG Annotation Import Pipeline | Pipeline to import KEGG annotations from KEGG into RGD |
7. | ClinVar Automated Import and Annotation Pipeline | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
8. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
9. | Comprehensive gene review and curation | RGD comprehensive gene curation |
Polr3h (Rattus norvegicus - Norway rat) |
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POLR3H (Homo sapiens - human) |
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Polr3h (Mus musculus - house mouse) |
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Polr3h (Chinchilla lanigera - long-tailed chinchilla) |
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POLR3H (Pan paniscus - bonobo/pygmy chimpanzee) |
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POLR3H (Canis lupus familiaris - dog) |
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Polr3h (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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POLR3H (Sus scrofa - pig) |
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POLR3H (Chlorocebus sabaeus - green monkey) |
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Polr3h (Heterocephalus glaber - naked mole-rat) |
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The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | Full Report | CSV | TAB | Printer | Gviewer |
RH130219 |
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RH139732 |
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alimentary part of gastrointestinal system
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appendage
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circulatory system
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ectoderm
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endocrine system
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endoderm
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exocrine system
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hemolymphoid system
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hepatobiliary system
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integumental system
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mesenchyme
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mesoderm
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nervous system
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renal system
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reproductive system
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respiratory system
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9 | 11 | 49 | 113 | 91 | 90 | 59 | 25 | 59 | 6 | 218 | 97 | 93 | 45 | 60 | 31 |
RefSeq Transcripts | NM_001127295 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
GenBank Nucleotide | AC096601 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
BC167088 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CH473950 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
FQ220736 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
FQ225628 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
FQ229831 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JAXUCZ010000007 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
Ensembl Acc Id: | ENSRNOT00000005943 ⟹ ENSRNOP00000005943 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Ensembl Acc Id: | ENSRNOT00000096389 ⟹ ENSRNOP00000090174 | ||||||||
Type: | CODING | ||||||||
Position: |
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Ensembl Acc Id: | ENSRNOT00000098323 ⟹ ENSRNOP00000089935 | ||||||||
Type: | CODING | ||||||||
Position: |
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Ensembl Acc Id: | ENSRNOT00000113540 ⟹ ENSRNOP00000090755 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | NM_001127295 ⟹ NP_001120767 | ||||||||||||||||||||||||||||
RefSeq Status: | PROVISIONAL | ||||||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||||||
Position: |
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Sequence: |
Protein RefSeqs | NP_001120767 | (Get FASTA) | NCBI Sequence Viewer |
GenBank Protein | AAI67088 | (Get FASTA) | NCBI Sequence Viewer |
EDM15691 | (Get FASTA) | NCBI Sequence Viewer | |
EDM15692 | (Get FASTA) | NCBI Sequence Viewer | |
EDM15693 | (Get FASTA) | NCBI Sequence Viewer | |
EDM15694 | (Get FASTA) | NCBI Sequence Viewer | |
EDM15695 | (Get FASTA) | NCBI Sequence Viewer | |
EDM15696 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSRNOP00000005943.5 | ||
ENSRNOP00000089935.1 | |||
ENSRNOP00000090174.1 | |||
ENSRNOP00000090755.1 |
RefSeq Acc Id: | NP_001120767 ⟸ NM_001127295 |
- UniProtKB: | B2RZB0 (UniProtKB/TrEMBL), A0A8I6AAU2 (UniProtKB/TrEMBL), F7FCX9 (UniProtKB/TrEMBL) |
- Sequence: |
Ensembl Acc Id: | ENSRNOP00000005943 ⟸ ENSRNOT00000005943 |
Ensembl Acc Id: | ENSRNOP00000089935 ⟸ ENSRNOT00000098323 |
Ensembl Acc Id: | ENSRNOP00000090755 ⟸ ENSRNOT00000113540 |
Ensembl Acc Id: | ENSRNOP00000090174 ⟸ ENSRNOT00000096389 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-B2RZB0-F1-model_v2 | AlphaFold | B2RZB0 | 1-204 | view protein structure |
eQTL | View at Phenogen | |
WGCNA | View at Phenogen | |
Tissue/Strain Expression | View at Phenogen |
RGD ID: | 13695519 | ||||||||
Promoter ID: | EPDNEW_R6044 | ||||||||
Type: | initiation region | ||||||||
Name: | Polr3h_1 | ||||||||
Description: | RNA polymerase III subunit H | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
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Database | Acc Id | Source(s) |
AGR Gene | RGD:1305889 | AgrOrtholog |
BioCyc Gene | G2FUF-32658 | BioCyc |
Ensembl Genes | ENSRNOG00000004471 | Ensembl, UniProtKB/TrEMBL |
Ensembl Transcript | ENSRNOT00000005943.8 | UniProtKB/TrEMBL |
ENSRNOT00000096389.1 | UniProtKB/TrEMBL | |
ENSRNOT00000098323.1 | UniProtKB/TrEMBL | |
ENSRNOT00000113540.1 | UniProtKB/TrEMBL | |
Gene3D-CATH | 2.40.50.140 | UniProtKB/TrEMBL |
3.30.1490.120 | UniProtKB/TrEMBL | |
IMAGE_CLONE | IMAGE:5621972 | IMAGE-MGC_LOAD |
InterPro | NA-bd_OB-fold | UniProtKB/TrEMBL |
RNA_pol_Rbc25 | UniProtKB/TrEMBL | |
RNA_pol_Rpb7-like_N_sf | UniProtKB/TrEMBL | |
RNA_pol_Rpb7_N | UniProtKB/TrEMBL | |
RNA_polE | UniProtKB/TrEMBL | |
Rpb7-like | UniProtKB/TrEMBL | |
KEGG Report | rno:300088 | UniProtKB/TrEMBL |
MGC_CLONE | MGC:189505 | IMAGE-MGC_LOAD |
NCBI Gene | 300088 | ENTREZGENE |
PANTHER | DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC8 | UniProtKB/TrEMBL |
PTHR12709 | UniProtKB/TrEMBL | |
Pfam | RNA_pol_Rbc25 | UniProtKB/TrEMBL |
RNA_pol_Rpb7_N | UniProtKB/TrEMBL | |
PhenoGen | Polr3h | PhenoGen |
RatGTEx | ENSRNOG00000004471 | RatGTEx |
Superfamily-SCOP | Nucleic_acid_OB | UniProtKB/TrEMBL |
RNA_pol_Rpb7_N | UniProtKB/TrEMBL | |
UniProt | A0A8I6AAU2 | ENTREZGENE, UniProtKB/TrEMBL |
A0A8I6ACH4_RAT | UniProtKB/TrEMBL | |
A0A8I6GHZ3_RAT | UniProtKB/TrEMBL | |
B2RZB0 | ENTREZGENE, UniProtKB/TrEMBL | |
F7FCX9 | ENTREZGENE, UniProtKB/TrEMBL |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
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2016-07-21 | Polr3h | RNA polymerase III subunit H | Polr3h | polymerase (RNA) III subunit H | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2016-03-16 | Polr3h | polymerase (RNA) III subunit H | Polr3h | polymerase (RNA) III (DNA directed) polypeptide H | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2009-10-22 | Polr3h | polymerase (RNA) III (DNA directed) polypeptide H | Polr3h | polymerase (RNA) III (DNA directed) polypeptide H (22.9kD) | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2008-09-24 | Polr3h | polymerase (RNA) III (DNA directed) polypeptide H (22.9kD) | Polr3h | polymerase (RNA) III (DNA directed) polypeptide H | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2008-04-30 | Polr3h | polymerase (RNA) III (DNA directed) polypeptide H | Polr3h_predicted | polymerase (RNA) III (DNA directed) polypeptide H (predicted) | 'predicted' is removed | 2292626 | APPROVED |
2005-01-12 | Polr3h_predicted | polymerase (RNA) III (DNA directed) polypeptide H (predicted) | Symbol and Name status set to approved | 70820 | APPROVED |