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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of inclusion body assembly
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Accession:GO:0090083 term browser browse the term
Definition:Any process that modulates the rate, frequency, or extent of inclusion body assembly. Inclusion body assembly is the aggregation, arrangement and bonding together of a set of components to form an inclusion body.


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regulation of inclusion body assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag5 BAG cochaperone 5 involved_in ISO
IBA
IDA		 (PMID:15603737)
GO_REF:0000033		 RGD
GO_Central		 PMID:15603737 PMID:15603737 GO_REF:0000033, RGD:8553807 NCBI chr 6:130,768,467...130,772,122
Ensembl chr 6:130,768,141...130,772,970 		JBrowse link
G Sncaip synuclein, alpha interacting protein involved_in ISS
ISO		 GO_REF:0000024
(PMID:15603737)		 ParkinsonsUK-UCL
RGD		 PMID:15603737 GO_REF:0000024 NCBI chr18:46,205,846...46,343,932
Ensembl chr18:46,207,152...46,343,929 		JBrowse link
negative regulation of inclusion body assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnaja4 DnaJ heat shock protein family (Hsp40) member A4 involved_in ISO (PMID:21231916) RGD PMID:21231916 NCBI chr 8:55,085,246...55,102,715
Ensembl chr 8:55,085,464...55,101,207 		JBrowse link
G Dnajb1 DnaJ heat shock protein family (Hsp40) member B1 involved_in ISO (PMID:21231916) RGD PMID:21231916 NCBI chr19:24,522,731...24,526,419
Ensembl chr19:24,522,717...24,526,458 		JBrowse link
G Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 involved_in ISO (PMID:15936278), (PMID:20889486)
(PMID:21231916)		 RGD PMID:15936278 PMID:20889486 PMID:21231916 NCBI chr 9:76,731,060...76,739,278
Ensembl chr 9:76,731,065...76,739,277 		JBrowse link
G Dnajb6 DnaJ heat shock protein family (Hsp40) member B6 involved_in ISO (PMID:20889486), (PMID:21231916) RGD PMID:20889486 PMID:21231916 NCBI chr 4:5,452,683...5,556,679
Ensembl chr 4:5,452,683...5,556,659 		JBrowse link
G Dnajb8 DnaJ heat shock protein family (Hsp40) member B8 involved_in ISO (PMID:21231916) RGD PMID:21231916 NCBI chr 4:120,681,918...120,685,108
Ensembl chr 4:120,681,926...120,687,552 		JBrowse link
G Hsf1 heat shock transcription factor 1 IMP RGD PMID:22216146 RGD:10402367 NCBI chr 7:108,196,040...108,223,011
Ensembl chr 7:108,196,056...108,223,011 		JBrowse link
G Hspa1a heat shock protein family A (Hsp70) member 1A involved_in ISO (PMID:15603737), (PMID:21231916) RGD PMID:15603737 PMID:21231916 NCBI chr20:3,870,765...3,873,221
Ensembl chr20:3,856,006...3,873,227 		JBrowse link
G Hspa1b heat shock protein family A (Hsp70) member 1B involved_in ISO (PMID:15603737), (PMID:21231916) RGD PMID:15603737 PMID:21231916 NCBI chr20:3,855,104...3,859,148
Ensembl chr20:3,856,006...3,873,240
Ensembl chr20:3,856,006...3,873,240 		JBrowse link
G Hspa2 heat shock protein family A (Hsp70) member 2 involved_in ISO (PMID:21231916) RGD PMID:21231916 NCBI chr 6:95,128,504...95,131,281
Ensembl chr 6:95,128,350...95,131,287 		JBrowse link
G Sacs sacsin molecular chaperone involved_in ISO (PMID:19208651) RGD PMID:19208651 NCBI chr15:35,285,783...35,370,335
Ensembl chr15:35,285,782...35,370,335 		JBrowse link
negative regulation of Lewy body formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ifnb1 interferon beta 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:26451483)		 UniProt
RGD		 PMID:26451483 GO_REF:0000024 NCBI chr 5:103,020,758...103,021,595
Ensembl chr 5:103,020,969...103,021,523 		JBrowse link
negative regulation of neurofibrillary tangle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir219a1 microRNA 219a-1 acts_upstream_of ISO (PMID:30556160) RGD PMID:30556160 NCBI chr20:4,829,687...4,829,796
Ensembl chr20:4,829,687...4,829,796 		JBrowse link
G Sorl1 sortilin related receptor 1 involved_in ISO (PMID:22986780) RGD PMID:22986780 NCBI chr 8:42,341,704...42,504,435
Ensembl chr 8:42,341,704...42,504,513 		JBrowse link
positive regulation of inclusion body assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc34 cell division cycle 34, ubiqiutin conjugating enzyme IMP RGD PMID:12401444 RGD:2316159 NCBI chr 7:10,017,588...10,023,586
Ensembl chr 7:10,017,588...10,023,186 		JBrowse link
G Hap1 huntingtin-associated protein 1 involved_in IDA PMID:9798945 UniProt PMID:9798945 RGD:10047369 NCBI chr10:85,277,890...85,286,126
Ensembl chr10:85,277,890...85,286,126 		JBrowse link
G Hsf1 heat shock transcription factor 1 IMP RGD PMID:22216146 RGD:10402367 NCBI chr 7:108,196,040...108,223,011
Ensembl chr 7:108,196,056...108,223,011 		JBrowse link
G Nox1 NADPH oxidase 1 IMP RGD PMID:23077033 RGD:329961565 NCBI chr  X:97,279,058...97,332,291
Ensembl chr  X:97,279,056...97,302,236 		JBrowse link
G Psmc5 proteasome 26S subunit, ATPase 5 IMP RGD PMID:18986984 RGD:7242199 NCBI chr10:91,187,763...91,193,697
Ensembl chr10:91,187,743...91,213,135 		JBrowse link
G Psmc6 proteasome 26S subunit, ATPase 6 IMP RGD PMID:18986984 RGD:7242199 NCBI chr15:18,542,585...18,564,057
Ensembl chr15:18,542,563...18,564,055 		JBrowse link
positive regulation of neurofibrillary tangle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E involved_in ISO (PMID:24154541) RGD PMID:24154541 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932 		JBrowse link
G Clu clusterin involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:15897157)
GO_REF:0000024		 Ensembl
RGD
Alzheimers_University_of_Toronto		 PMID:15897157 GO_REF:0000024 GO_REF:0000107 NCBI chr15:40,161,068...40,200,315
Ensembl chr15:40,174,617...40,200,315 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20076
    cellular process 19155
      regulation of cellular process 12773
        regulation of cellular component organization 2707
          regulation of inclusion body assembly 22
            negative regulation of inclusion body assembly + 13
            positive regulation of inclusion body assembly + 8
            regulation of Lewy body formation + 1
            regulation of neurofibrillary tangle assembly + 4
Path 2
Term Annotations click to browse term
  biological_process 20076
    cellular process 19155
      cellular component organization or biogenesis 7178
        cellular component organization 6923
          cellular component assembly 3201
            inclusion body assembly 33
              regulation of inclusion body assembly 22
                negative regulation of inclusion body assembly + 13
                positive regulation of inclusion body assembly + 8
                regulation of Lewy body formation + 1
                regulation of neurofibrillary tangle assembly + 4
paths to the root