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negative regulation of wound healing - Ontology Report - Rat Genome Database

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ONTOLOGY REPORT - ANNOTATIONS

Term:negative regulation of wound healing
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Accession:GO:0061045 term browser browse the term
Definition:Any process that decreases the rate, frequency, or extent of the series of events that restore integrity to a damaged tissue, following an injury.

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negative regulation of wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AJAP1 adherens junctions associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:3,340,904...3,482,242
Ensembl chr 1:4,505,143...4,590,779 		JBrowse link
G ALOX5 arachidonate 5-lipoxygenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:42,461,398...42,531,576
Ensembl chr10:45,639,946...45,710,016 		JBrowse link
G CASK calcium/calmodulin dependent serine protein kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:33,967,329...34,374,385
Ensembl chr  X:41,659,295...42,066,570 		JBrowse link
G CD109 CD109 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:71,519,293...71,654,300
Ensembl chr 6:74,801,384...74,937,414 		JBrowse link
G CLDN19 claudin 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:42,032,999...42,040,006
Ensembl chr 1:43,408,876...43,417,448 		JBrowse link
G CLDN3 claudin 3 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 7:80,924,731...80,925,393 JBrowse link
G CRK CRK proto-oncogene, adaptor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:1,406,335...1,438,587
Ensembl chr17:1,306,509...1,336,569 		JBrowse link
G EPPK1 epiplakin 1 involved_in ISO (PMID:23398049)
(PMID:20926261)		 UniProt PMID:20926261 PMID:23398049 NCBI chr 8:140,611,627...140,640,303 JBrowse link
G FGF2 fibroblast growth factor 2 involved_in ISO (PMID:19577615) UniProt PMID:19577615 NCBI chr 4:115,005,136...115,076,369
Ensembl chr 4:126,149,813...126,214,942 		JBrowse link
G MMRN1 multimerin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:82,132,874...82,254,343
Ensembl chr 4:92,892,824...92,974,854 		JBrowse link
G MUC16 mucin 16, cell surface associated acts_upstream_of_or_within ISO (PMID:24812549) MGI PMID:24812549 NCBI chr19:8,416,393...8,568,418 JBrowse link
G SMAD3 SMAD family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:46,013,764...46,143,126
Ensembl chr15:64,284,949...64,414,185 		JBrowse link
G WFDC1 WAP four-disulfide core domain 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25219356) Ensembl
MGI		 PMID:25219356 GO_REF:0000107 NCBI chr16:64,958,920...64,994,314
Ensembl chr16:84,301,168...84,333,432 		JBrowse link
G WNT4 Wnt family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:21,310,228...21,335,985
Ensembl chr 1:22,255,056...22,268,801 		JBrowse link
fibrinolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANGPTL1 angiopoietin like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:154,339,139...154,360,540
Ensembl chr 1:158,030,657...158,052,089 		JBrowse link
G ANGPTL3 angiopoietin like 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:61,855,870...61,863,476
Ensembl chr 1:63,670,516...63,679,194 		JBrowse link
G ANXA2 annexin A2 acts_upstream_of_or_within ISO (PMID:14702107) MGI PMID:14702107 NCBI chr15:39,322,303...39,371,565
Ensembl chr15:57,625,425...57,674,250 		JBrowse link
G CPB2 carboxypeptidase B2 involved_in ISO
IEA		 RGD
TreeGrafter
InterPro		 PMID:11848438 GO_REF:0000002 GO_REF:0000118 RGD:632532 NCBI chr13:26,926,788...26,979,767 JBrowse link
G F12 coagulation factor XII involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:172,703,724...172,711,618
Ensembl chr 5:179,766,243...179,773,485 		JBrowse link
G F2 coagulation factor II, thrombin involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:46,669,925...46,690,391
Ensembl chr11:47,227,891...47,249,157 		JBrowse link
G FGA fibrinogen alpha chain involved_in ISO (PMID:16846481) UniProt PMID:16846481 NCBI chr 4:146,949,680...146,957,291 JBrowse link
G FGB fibrinogen beta chain involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:146,929,561...146,937,665
Ensembl chr 4:158,747,659...158,755,766 		JBrowse link
G FGG fibrinogen gamma chain involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:146,970,671...146,979,348
Ensembl chr 4:158,788,966...158,797,237 		JBrowse link
G FGL1 fibrinogen like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:17,083,524...17,128,152
Ensembl chr 8:14,035,855...14,066,956 		JBrowse link
G GP1BA glycoprotein Ib platelet subunit alpha involved_in ISO (PMID:12855810) UniProt PMID:12855810 NCBI chr17:4,980,083...4,983,219 JBrowse link
G HRG histidine rich glycoprotein involved_in
acts_upstream_of		 IEA
ISO		 (PMID:15869579) UniProt
MGI		 PMID:15869579 GO_REF:0000043 NCBI chr 3:183,701,069...183,712,365
Ensembl chr 3:192,168,299...192,180,539 		JBrowse link
G LOC100982214 plasminogen involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 NCBI chr 6:158,662,192...158,713,413
Ensembl chr 6:163,673,464...163,736,777 		JBrowse link
G PLAU plasminogen activator, urokinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9733098) Ensembl
TreeGrafter
MGI		 PMID:9733098 GO_REF:0000107 GO_REF:0000118 NCBI chr10:70,433,340...70,441,569
Ensembl chr10:73,105,895...73,113,136 		JBrowse link
G PROS1 protein S involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:90,934,641...91,039,059
Ensembl chr 3:97,615,734...97,718,756 		JBrowse link
negative regulation of blood coagulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADTRP androgen dependent TFPI regulating protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:11,550,584...11,648,755
Ensembl chr 6:11,829,782...11,895,656 		JBrowse link
G ANXA5 annexin A5 ISO RGD PMID:20684318 RGD:7241850 NCBI chr 4:113,868,218...113,897,243
Ensembl chr 4:125,006,038...125,034,972 		JBrowse link
G APOE apolipoprotein E involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:41,853,669...41,857,252
Ensembl chr19:50,459,906...50,463,490 		JBrowse link
G APOH apolipoprotein H involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:60,154,389...60,171,762
Ensembl chr17:65,365,250...65,382,483 		JBrowse link
G F2 coagulation factor II, thrombin involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:46,669,925...46,690,391
Ensembl chr11:47,227,891...47,249,157 		JBrowse link
G KNG1 kininogen 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:183,751,598...183,778,655
Ensembl chr 3:192,219,462...192,245,149 		JBrowse link
G PF4 platelet factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:50,208,806...50,210,570
Ensembl chr 4:56,041,833...56,043,750 		JBrowse link
G PROC protein C, inactivator of coagulation factors Va and VIIIa involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:9616155)
(PMID:9788960)		 RGD
TreeGrafter
MGI		 PMID:1440533 PMID:9616155 PMID:9788960 GO_REF:0000118 RGD:11100042 NCBI chr2B:32,846,899...32,859,060
Ensembl chr2B:128,083,794...128,094,625 		JBrowse link
G SERPINE2 serpin family E member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:111,221,317...111,285,491
Ensembl chr2B:229,797,655...229,861,040 		JBrowse link
G TFPI tissue factor pathway inhibitor involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:74,744,154...74,834,338
Ensembl chr2B:192,541,881...192,581,384 		JBrowse link
G THBD thrombomodulin involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:22,992,341...22,996,415
Ensembl chr20:23,345,917...23,347,812 		JBrowse link
G TSPAN8 tetraspanin 8 ISO RGD PMID:9531564 RGD:634231 NCBI chr12:68,653,209...68,686,565
Ensembl chr12:71,417,577...71,450,873 		JBrowse link
negative regulation of fibrinolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOH apolipoprotein H involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:60,154,389...60,171,762
Ensembl chr17:65,365,250...65,382,483 		JBrowse link
G CPB2 carboxypeptidase B2 ISO RGD PMID:17002650 RGD:2313647 NCBI chr13:26,926,788...26,979,767 JBrowse link
G HRG histidine rich glycoprotein acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15869579) MGI
TreeGrafter		 PMID:15869579 GO_REF:0000118 NCBI chr 3:183,701,069...183,712,365
Ensembl chr 3:192,168,299...192,180,539 		JBrowse link
G LOC100982214 plasminogen involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:158,662,192...158,713,413
Ensembl chr 6:163,673,464...163,736,777 		JBrowse link
G SERPINE1 serpin family E member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:93,267,517...93,279,728
Ensembl chr 7:106,510,130...106,518,450 		JBrowse link
G SERPINF2 serpin family F member 2 involved_in ISO
IEA		 RGD
Ensembl
InterPro		 PMID:6506034 GO_REF:0000002 GO_REF:0000107 RGD:1625541 NCBI chr17:1,725,469...1,738,887
Ensembl chr17:1,618,549...1,631,570 		JBrowse link
G THBS1 thrombospondin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:18,521,802...18,538,172
Ensembl chr15:36,776,756...36,793,170 		JBrowse link
negative regulation of platelet activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOE apolipoprotein E involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:41,853,669...41,857,252
Ensembl chr19:50,459,906...50,463,490 		JBrowse link
G C1QTNF1 C1q and TNF related 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:73,099,560...73,126,304
Ensembl chr17:78,644,531...78,669,386 		JBrowse link
G GP5 glycoprotein V platelet acts_upstream_of_or_within ISO (PMID:10557321), (PMID:11435305) MGI PMID:10557321 PMID:11435305 NCBI chr 3:191,691,432...191,696,906
Ensembl chr 3:202,008,334...202,010,005 		JBrowse link
G PDGFA platelet derived growth factor subunit A involved_in ISO (PMID:2538439) BHF-UCL PMID:2538439 NCBI chr 7:648,722...672,023 JBrowse link
G PDGFB platelet derived growth factor subunit B involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:20,127,223...20,148,407
Ensembl chr22:37,944,018...37,964,883 		JBrowse link
G PDGFRA platelet derived growth factor receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:69,639,081...69,709,870
Ensembl chr 4:76,199,382...76,271,097 		JBrowse link
G SERPINE2 serpin family E member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19855083) Ensembl
MGI		 PMID:19855083 GO_REF:0000107 NCBI chr2B:111,221,317...111,285,491
Ensembl chr2B:229,797,655...229,861,040 		JBrowse link
negative regulation of platelet aggregation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS18 ADAM metallopeptidase with thrombospondin type 1 motif 18 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19218546) Ensembl
MGI		 PMID:19218546 GO_REF:0000107 NCBI chr16:57,857,112...58,011,181
Ensembl chr16:77,291,148...77,445,664 		JBrowse link
G ALOX12 arachidonate 12-lipoxygenase, 12S type involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:7,026,839...7,041,598
Ensembl chr17:7,014,591...7,029,602 		JBrowse link
G C1QTNF1 C1q and TNF related 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:73,099,560...73,126,304
Ensembl chr17:78,644,531...78,669,386 		JBrowse link
G CD9 CD9 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:6,327,783...6,366,083
Ensembl chr12:6,245,348...6,283,385 		JBrowse link
G CEACAM1 CEA cell adhesion molecule 1 involved_in ISO (PMID:19008452) UniProt PMID:19008452 NCBI chr19:39,395,550...39,417,063
Ensembl chr19:47,989,430...48,008,739 		JBrowse link
G PRKCD protein kinase C delta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:53,104,137...53,135,588
Ensembl chr 3:54,330,328...54,357,910 		JBrowse link
G PRKG1 protein kinase cGMP-dependent 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:47,642,312...48,935,188
Ensembl chr10:49,779,211...51,064,882 		JBrowse link
G SERPINE2 serpin family E member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:111,221,317...111,285,491
Ensembl chr2B:229,797,655...229,861,040 		JBrowse link
G SH2B3 SH2B adaptor protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:108,977,344...109,024,029 JBrowse link
G TMX1 thioredoxin related transmembrane protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:31,844,418...31,861,911
Ensembl chr14:50,129,568...50,147,057 		JBrowse link
G UBASH3B ubiquitin associated and SH3 domain containing B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20585042) Ensembl
MGI		 PMID:20585042 GO_REF:0000107 NCBI chr11:117,489,411...117,647,719
Ensembl chr11:121,410,545...121,563,133 		JBrowse link
negative regulation of skeletal muscle tissue regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MYOZ1 myozenin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:70,179,020...70,194,885
Ensembl chr10:72,635,720...72,645,602 		JBrowse link
negative regulation of vascular wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALOX5 arachidonate 5-lipoxygenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:42,461,398...42,531,576
Ensembl chr10:45,639,946...45,710,016 		JBrowse link
G SERPINE1 serpin family E member 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:93,267,517...93,279,728
Ensembl chr 7:106,510,130...106,518,450 		JBrowse link
G SLC12A2 solute carrier family 12 member 2 acts_upstream_of_or_within ISO (PMID:28577991) ARUK-UCL PMID:28577991 NCBI chr 5:123,499,267...123,603,777
Ensembl chr 5:129,262,134...129,364,563 		JBrowse link
G TAFA5 TAFA chemokine like family member 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 PMID:29453251
(PMID:29453251)		 MGI
Ensembl		 PMID:29453251 GO_REF:0000107 RGD:42721986 NCBI chr22:28,675,007...28,943,154 JBrowse link
G TNF tumor necrosis factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:31,236,650...31,239,423
Ensembl chr 6:32,126,618...32,129,381 		JBrowse link
negative regulation of wound healing, spreading of epidermal cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLASP1 cytoplasmic linker associated protein 1 involved_in ISO (PMID:24859005) UniProt PMID:24859005 NCBI chr2B:8,265,626...8,574,282
Ensembl chr2B:121,840,484...122,102,793 		JBrowse link
G CLASP2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:24859005) UniProt PMID:24859005 NCBI chr 3:33,418,300...33,640,185
Ensembl chr 3:33,721,153...33,938,560 		JBrowse link
G FIGNL2 fidgetin like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:36,914,415...36,945,018
Ensembl chr12:37,716,039...37,718,001 		JBrowse link
G PHLDB2 pleckstrin homology like domain family B member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:108,878,798...109,120,501
Ensembl chr 3:115,745,634...116,044,586 		JBrowse link
G PTEN phosphatase and tensin homolog involved_in ISO (PMID:27919618) BHF-UCL PMID:27919618 NCBI chr10:84,587,841...84,689,043
Ensembl chr10:88,093,539...88,194,605 		JBrowse link
positive regulation of fibrinolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G F11 coagulation factor XI involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:178,436,865...178,459,568
Ensembl chr 4:190,643,733...190,666,512 		JBrowse link
G F12 coagulation factor XII involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:172,703,724...172,711,618
Ensembl chr 5:179,766,243...179,773,485 		JBrowse link
G KLKB1 kallikrein B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:178,398,359...178,429,448
Ensembl chr 4:190,604,901...190,636,300 		JBrowse link
G LOC100982214 plasminogen involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:158,662,192...158,713,413
Ensembl chr 6:163,673,464...163,736,777 		JBrowse link
regulation of fibrinolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOH apolipoprotein H involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:60,154,389...60,171,762
Ensembl chr17:65,365,250...65,382,483 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19312
    negative regulation of biological process 5826
      negative regulation of response to stimulus 1772
        negative regulation of response to external stimulus 413
          negative regulation of wound healing 68
            negative regulation of blood coagulation + 45
            negative regulation of plasma membrane repair 0
            negative regulation of skeletal muscle tissue regeneration + 1
            negative regulation of vascular wound healing 5
            negative regulation of wound healing, spreading of epidermal cells 5
Path 2
Term Annotations click to browse term
  biological_process 19312
    biological regulation 11878
      regulation of biological process 11495
        regulation of response to stimulus 4039
          regulation of response to stress 1416
            regulation of response to wounding 182
              negative regulation of response to wounding 96
                negative regulation of wound healing 68
                  negative regulation of blood coagulation + 45
                  negative regulation of plasma membrane repair 0
                  negative regulation of skeletal muscle tissue regeneration + 1
                  negative regulation of vascular wound healing 5
                  negative regulation of wound healing, spreading of epidermal cells 5
paths to the root