ADTRP (androgen dependent TFPI regulating protein) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: ADTRP (androgen dependent TFPI regulating protein) Pan paniscus
Analyze
Symbol: ADTRP
Name: androgen dependent TFPI regulating protein
RGD ID: 12015572
Description: ENCODES a protein that exhibits hydrolase activity (inferred); INVOLVED IN positive regulation of protein phosphorylation (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); FOUND IN caveola (inferred); cell surface (inferred); endomembrane system (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2526,359,072 - 26,430,399 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1622,349,346 - 22,420,599 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0611,550,584 - 11,648,755 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1611,829,782 - 11,895,656 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl611,829,782 - 11,895,656 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
ADTRP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2526,359,072 - 26,430,399 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1622,349,346 - 22,420,599 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0611,550,584 - 11,648,755 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1611,829,782 - 11,895,656 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl611,829,782 - 11,895,656 (-)Ensemblpanpan1.1panPan2
ADTRP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38611,713,523 - 11,778,803 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl611,712,054 - 11,807,046 (-)EnsemblGRCh38hg38GRCh38
GRCh37611,713,756 - 11,779,036 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36611,821,895 - 11,887,052 (-)NCBINCBI36Build 36hg18NCBI36
Build 34611,821,894 - 11,887,052NCBI
Celera612,941,888 - 13,007,296 (-)NCBICelera
Cytogenetic Map6p24.1NCBI
HuRef611,645,931 - 11,711,306 (-)NCBIHuRef
CHM1_1611,716,021 - 11,781,371 (-)NCBICHM1_1
T2T-CHM13v2.0611,581,768 - 11,675,389 (-)NCBIT2T-CHM13v2.0
Adtrp
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391341,916,621 - 42,001,092 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1341,916,624 - 42,001,160 (-)EnsemblGRCm39 Ensembl
GRCm381341,763,145 - 41,847,616 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1341,763,148 - 41,847,684 (-)EnsemblGRCm38mm10GRCm38
MGSCv371341,858,517 - 41,942,985 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361341,774,122 - 41,858,462 (-)NCBIMGSCv36mm8
Celera1342,843,698 - 42,926,413 (-)NCBICelera
Cytogenetic Map13A4NCBI
cM Map1320.61NCBI
Adtrp
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81723,113,578 - 23,199,616 (+)NCBIGRCr8
mRatBN7.21722,907,758 - 22,993,834 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1722,930,740 - 22,993,826 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1722,782,697 - 22,868,861 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01724,386,378 - 24,472,529 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01722,717,160 - 22,803,208 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01722,619,913 - 22,688,296 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1722,619,891 - 22,688,307 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01724,597,532 - 24,662,658 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41728,815,650 - 28,879,571 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11728,818,490 - 28,882,411 (+)NCBI
Celera1722,604,529 - 22,667,496 (+)NCBICelera
Cytogenetic Map17p12NCBI
Adtrp
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554652,742,169 - 2,809,790 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554652,721,171 - 2,823,368 (+)NCBIChiLan1.0ChiLan1.0
ADTRP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13511,300,186 - 11,362,893 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3511,300,887 - 11,362,101 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3511,251,953 - 11,314,604 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03511,405,929 - 11,467,996 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3511,406,525 - 11,468,000 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13511,235,206 - 11,297,780 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03511,284,005 - 11,346,710 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03512,608,632 - 12,671,260 (-)NCBIUU_Cfam_GSD_1.0
Adtrp
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494613,063,146 - 13,119,309 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365341,332,625 - 1,389,572 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365341,332,682 - 1,389,242 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ADTRP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl78,243,371 - 8,313,648 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.178,242,770 - 8,313,684 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.278,566,929 - 8,644,961 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ADTRP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11760,371,412 - 60,436,988 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1760,368,546 - 60,438,864 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604411,738,513 - 11,805,652 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Adtrp
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475614,290,028 - 14,354,284 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475614,289,144 - 14,354,999 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSPPAT00000041552   ⟹   ENSPPAP00000018810
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl611,829,782 - 11,895,656 (-)Ensembl
Ensembl Acc Id: ENSPPAT00000041556   ⟹   ENSPPAP00000018814
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl611,838,799 - 11,894,822 (-)Ensembl
RefSeq Acc Id: XM_034961438   ⟹   XP_034817329
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2526,371,721 - 26,430,399 (-)NCBI
NHGRI_mPanPan1622,361,994 - 22,420,599 (-)NCBI
Mhudiblu_PPA_v0611,563,232 - 11,636,481 (-)NCBI
RefSeq Acc Id: XM_034961441   ⟹   XP_034817332
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2526,359,072 - 26,430,397 (-)NCBI
NHGRI_mPanPan1622,349,346 - 22,420,599 (-)NCBI
Mhudiblu_PPA_v0611,550,584 - 11,620,334 (-)NCBI
RefSeq Acc Id: XM_055113180   ⟹   XP_054969155
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2526,359,072 - 26,430,398 (-)NCBI
NHGRI_mPanPan1622,349,346 - 22,420,599 (-)NCBI
RefSeq Acc Id: XM_055113181   ⟹   XP_054969156
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2526,359,072 - 26,430,398 (-)NCBI
NHGRI_mPanPan1622,349,346 - 22,420,599 (-)NCBI
RefSeq Acc Id: XM_055113182   ⟹   XP_054969157
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2526,359,072 - 26,430,398 (-)NCBI
NHGRI_mPanPan1622,349,346 - 22,420,599 (-)NCBI
RefSeq Acc Id: XM_055113183   ⟹   XP_054969158
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2526,359,072 - 26,430,392 (-)NCBI
NHGRI_mPanPan1622,349,346 - 22,420,599 (-)NCBI
RefSeq Acc Id: XM_055113184   ⟹   XP_054969159
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2526,359,072 - 26,430,392 (-)NCBI
NHGRI_mPanPan1622,349,346 - 22,420,599 (-)NCBI
RefSeq Acc Id: XM_055113185   ⟹   XP_054969160
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2526,359,072 - 26,430,392 (-)NCBI
NHGRI_mPanPan1622,349,346 - 22,420,599 (-)NCBI
RefSeq Acc Id: XP_034817332   ⟸   XM_034961441
- Peptide Label: isoform X4
- UniProtKB: A0A2R9AV55 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034817329   ⟸   XM_034961438
- Peptide Label: isoform X1
Ensembl Acc Id: ENSPPAP00000018810   ⟸   ENSPPAT00000041552
Ensembl Acc Id: ENSPPAP00000018814   ⟸   ENSPPAT00000041556
RefSeq Acc Id: XP_054969160   ⟸   XM_055113185
- Peptide Label: isoform X3
- UniProtKB: A0A2R9ASQ7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054969157   ⟸   XM_055113182
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054969159   ⟸   XM_055113184
- Peptide Label: isoform X3
- UniProtKB: A0A2R9ASQ7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054969156   ⟸   XM_055113181
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054969158   ⟸   XM_055113183
- Peptide Label: isoform X3
- UniProtKB: A0A2R9ASQ7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054969155   ⟸   XM_055113180
- Peptide Label: isoform X2


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000032558 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000041552.1 UniProtKB/TrEMBL
  ENSPPAT00000041556.1 UniProtKB/TrEMBL
InterPro Far-17a_AIG1 UniProtKB/TrEMBL
NCBI Gene ADTRP ENTREZGENE
PANTHER ANDROGEN-DEPENDENT TFPI-REGULATING PROTEIN UniProtKB/TrEMBL
  PTHR10989 UniProtKB/TrEMBL
Pfam Far-17a_AIG1 UniProtKB/TrEMBL
UniProt A0A2R9ASQ7 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9AV55 ENTREZGENE, UniProtKB/TrEMBL