ADTRP (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 5 | 26,359,072 - 26,430,399 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 6 | 22,349,346 - 22,420,599 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 6 | 11,550,584 - 11,648,755 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 6 | 11,829,782 - 11,895,656 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 6 | 11,829,782 - 11,895,656 (-) | Ensembl | panpan1.1 | | panPan2 | |
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ADTRP (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 6 | 11,713,523 - 11,778,803 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 6 | 11,712,054 - 11,807,046 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 6 | 11,713,756 - 11,779,036 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 6 | 11,821,895 - 11,887,052 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 6 | 11,821,894 - 11,887,052 | NCBI | | | | | Celera | 6 | 12,941,888 - 13,007,296 (-) | NCBI | | Celera | | | Cytogenetic Map | 6 | p24.1 | NCBI | | | | | HuRef | 6 | 11,645,931 - 11,711,306 (-) | NCBI | | HuRef | | | CHM1_1 | 6 | 11,716,021 - 11,781,371 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 6 | 11,581,768 - 11,675,389 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Adtrp (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 13 | 41,916,621 - 42,001,092 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 13 | 41,916,624 - 42,001,160 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 13 | 41,763,145 - 41,847,616 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 13 | 41,763,148 - 41,847,684 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 13 | 41,858,517 - 41,942,985 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 13 | 41,774,122 - 41,858,462 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 13 | 42,843,698 - 42,926,413 (-) | NCBI | | Celera | | | Cytogenetic Map | 13 | A4 | NCBI | | | | | cM Map | 13 | 20.61 | NCBI | | | | |
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Adtrp (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 17 | 23,113,578 - 23,199,616 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 17 | 22,907,758 - 22,993,834 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 17 | 22,930,740 - 22,993,826 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 17 | 22,782,697 - 22,868,861 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 17 | 24,386,378 - 24,472,529 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 17 | 22,717,160 - 22,803,208 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 17 | 22,619,913 - 22,688,296 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 17 | 22,619,891 - 22,688,307 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 17 | 24,597,532 - 24,662,658 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 17 | 28,815,650 - 28,879,571 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 17 | 28,818,490 - 28,882,411 (+) | NCBI | | | | | Celera | 17 | 22,604,529 - 22,667,496 (+) | NCBI | | Celera | | | Cytogenetic Map | 17 | p12 | NCBI | | | | |
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Adtrp (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955465 | 2,742,169 - 2,809,790 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955465 | 2,721,171 - 2,823,368 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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ADTRP (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 35 | 11,300,186 - 11,362,893 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 35 | 11,300,887 - 11,362,101 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 35 | 11,251,953 - 11,314,604 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 35 | 11,405,929 - 11,467,996 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 35 | 11,406,525 - 11,468,000 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 35 | 11,235,206 - 11,297,780 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 35 | 11,284,005 - 11,346,710 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 35 | 12,608,632 - 12,671,260 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Adtrp (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404946 | 13,063,146 - 13,119,309 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936534 | 1,332,625 - 1,389,572 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936534 | 1,332,682 - 1,389,242 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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ADTRP (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 7 | 8,243,371 - 8,313,648 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 7 | 8,242,770 - 8,313,684 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 7 | 8,566,929 - 8,644,961 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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ADTRP (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 17 | 60,371,412 - 60,436,988 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 17 | 60,368,546 - 60,438,864 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666044 | 11,738,513 - 11,805,652 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Adtrp (Heterocephalus glaber - naked mole-rat) |
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