SLC12A2 (solute carrier family 12 member 2) - Rat Genome Database
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Gene: SLC12A2 (solute carrier family 12 member 2) Pan paniscus
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Symbol: SLC12A2
Name: solute carrier family 12 member 2
RGD ID: 11853415
Description: ENCODES a protein that exhibits ammonium transmembrane transporter activity (ortholog); cation:chloride symporter activity (ortholog); chaperone binding (ortholog); INVOLVED IN aging (ortholog); ammonium transport (ortholog); branching involved in mammary gland duct morphogenesis (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); autosomal dominant nonsyndromic deafness 78 (ortholog); carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: solute carrier family 12 (sodium/potassium/chloride transporters), member 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.15129,260,476 - 129,364,563 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5129,262,134 - 129,364,563 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v05123,499,267 - 123,603,777 (+)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References

Genomics

Comparative Map Data
SLC12A2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.15129,260,476 - 129,364,563 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5129,262,134 - 129,364,563 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v05123,499,267 - 123,603,777 (+)NCBIMhudiblu_PPA_v0panPan3
SLC12A2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl5128,083,766 - 128,189,677 (+)EnsemblGRCh38hg38GRCh38
GRCh385128,083,766 - 128,189,677 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh375127,419,458 - 127,525,369 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 365127,447,382 - 127,553,279 (+)NCBINCBI36hg18NCBI36
Build 345127,447,381 - 127,553,278NCBI
Celera5123,551,492 - 123,657,387 (+)NCBI
Cytogenetic Map5q23.3NCBI
HuRef5122,610,291 - 122,716,113 (+)NCBIHuRef
CHM1_15126,852,070 - 126,957,950 (+)NCBICHM1_1
Slc12a2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391858,011,505 - 58,079,893 (+)NCBIGRCm39mm39
GRCm39 Ensembl1858,011,750 - 58,079,893 (+)Ensembl
GRCm381857,878,512 - 57,946,821 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1857,878,678 - 57,946,821 (+)EnsemblGRCm38mm10GRCm38
MGSCv371858,038,332 - 58,106,475 (+)NCBIGRCm37mm9NCBIm37
MGSCv361858,004,047 - 58,072,174 (+)NCBImm8
Celera1859,157,060 - 59,258,313 (+)NCBICelera
Cytogenetic Map18D3NCBI
cM Map1832.15NCBI
Slc12a2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21851,348,282 - 51,416,448 (+)NCBI
Rnor_6.0 Ensembl1852,917,124 - 52,985,261 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01852,917,124 - 52,985,281 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01852,104,434 - 52,172,638 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41853,673,215 - 53,741,352 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11853,735,140 - 53,805,295 (+)NCBI
Celera1849,478,614 - 49,546,320 (+)NCBICelera
Cytogenetic Map18q12.1NCBI
Slc12a2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554151,137,327 - 1,219,241 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554151,138,297 - 1,219,241 (+)NCBIChiLan1.0ChiLan1.0
SLC12A2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl1117,143,943 - 17,253,695 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.11117,143,943 - 17,256,248 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Slc12a2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365041,378,812 - 1,465,463 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC12A2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2131,016,430 - 131,109,305 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12131,016,430 - 131,109,307 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22136,368,254 - 136,460,658 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SLC12A2
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12331,028,514 - 31,132,263 (+)NCBI
ChlSab1.1 Ensembl2331,029,026 - 31,132,289 (+)Ensembl
Slc12a2
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462477413,236,306 - 13,335,412 (-)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000030293   ⟹   ENSPPAP00000007716
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl5129,262,134 - 129,364,563 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000030295   ⟹   ENSPPAP00000007717
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl5129,262,134 - 129,364,169 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000030297   ⟹   ENSPPAP00000007719
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl5129,262,134 - 129,362,278 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000030300   ⟹   ENSPPAP00000007720
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl5129,328,841 - 129,364,169 (+)Ensembl
RefSeq Acc Id: XM_034960444   ⟹   XP_034816335
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v05123,499,267 - 123,603,777 (+)NCBI
RefSeq Acc Id: XM_034960445   ⟹   XP_034816336
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v05123,499,457 - 123,602,056 (+)NCBI
RefSeq Acc Id: XM_034960446   ⟹   XP_034816337
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v05123,499,320 - 123,594,124 (+)NCBI
Protein Sequences
Protein RefSeqs XP_034816335 (Get FASTA)   NCBI Sequence Viewer  
  XP_034816336 (Get FASTA)   NCBI Sequence Viewer  
  XP_034816337 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_034816335   ⟸   XM_034960444
- Peptide Label: isoform X1
RefSeq Acc Id: XP_034816337   ⟸   XM_034960446
- Peptide Label: isoform X3
RefSeq Acc Id: XP_034816336   ⟸   XM_034960445
- Peptide Label: isoform X2
RefSeq Acc Id: ENSPPAP00000007716   ⟸   ENSPPAT00000030293
RefSeq Acc Id: ENSPPAP00000007719   ⟸   ENSPPAT00000030297
RefSeq Acc Id: ENSPPAP00000007717   ⟸   ENSPPAT00000030295
RefSeq Acc Id: ENSPPAP00000007720   ⟸   ENSPPAT00000030300
Protein Domains
AA_permease   AA_permease_N   SLC12


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000027021 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSPPAP00000007716 UniProtKB/TrEMBL
  ENSPPAP00000007717 UniProtKB/TrEMBL
  ENSPPAP00000007719 UniProtKB/TrEMBL
  ENSPPAP00000007720 UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000030293 UniProtKB/TrEMBL
  ENSPPAT00000030295 UniProtKB/TrEMBL
  ENSPPAT00000030297 UniProtKB/TrEMBL
  ENSPPAT00000030300 UniProtKB/TrEMBL
InterPro AA-permease/SLC12A_dom UniProtKB/TrEMBL
  AA_permease_N UniProtKB/TrEMBL
  NKCC1 UniProtKB/TrEMBL
  SLC12_C UniProtKB/TrEMBL
  SLC12A1/SLC12A2 UniProtKB/TrEMBL
  SLC12A_fam UniProtKB/TrEMBL
NCBI Gene SLC12A2 ENTREZGENE
PANTHER PTHR11827:SF58 UniProtKB/TrEMBL
Pfam AA_permease UniProtKB/TrEMBL
  AA_permease_N UniProtKB/TrEMBL
  SLC12 UniProtKB/TrEMBL
PRINTS NAKCLTRNSPRT UniProtKB/TrEMBL
  NAKCLTRSPRT1 UniProtKB/TrEMBL
TIGRFAMs 2a30 UniProtKB/TrEMBL
UniProt A0A2R8ZRY1_PANPA UniProtKB/TrEMBL
  A0A2R8ZT54_PANPA UniProtKB/TrEMBL
  A0A2R8ZV34_PANPA UniProtKB/TrEMBL
  A0A2R8ZXR2_PANPA UniProtKB/TrEMBL