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neuron remodeling - Ontology Report - Rat Genome Database

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ONTOLOGY REPORT - ANNOTATIONS

Term:neuron remodeling
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Accession:GO:0016322 term browser browse the term
Definition:The developmentally regulated remodeling of neuronal projections such as pruning to eliminate the extra dendrites and axons projections set up in early stages of nervous system development.
Synonyms:exact_synonym: neuron remodelling;   neuronal remodeling
 narrow_synonym: axon pruning

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show annotations for term's descendants           Sort by:
neuron remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:2153719 (PMID:19805386) RGD PMID:19805386 NCBI chr13:68,673,702...68,770,846
Ensembl chr13:68,673,722...68,839,742 		JBrowse link
G Adgrb3 adhesion G protein-coupled receptor B3 involved_in
acts_upstream_of_or_within 		IBA
ISO
IEA 		GO_REF:0000033
MGI:1344400 (PMID:25611509)
GO_REF:0000107 		GO_Central
RGD
Ensembl		 PMID:25611509 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:27,421,168...28,148,979
Ensembl chr 9:27,421,168...28,148,855 		JBrowse link
G Anks1a ankyrin repeat and sterile alpha motif domain containing 1A involved_in ISO (PMID:17875921) RGD PMID:17875921 NCBI chr20:5,963,658...6,117,139
Ensembl chr20:5,963,678...6,117,148 		JBrowse link
G App amyloid beta precursor protein involved_in
acts_upstream_of_or_within 		ISS
ISO 		GO_REF:0000024
MGI:2136847 (PMID:10219973) 		UniProt
RGD		 PMID:10219973 GO_REF:0000024 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561 		JBrowse link
G C1qa complement C1q A chain involved_in ISO (PMID:18083105) RGD PMID:18083105 NCBI chr 5:149,133,635...149,136,482
Ensembl chr 5:149,133,636...149,136,534 		JBrowse link
G C1ql1 complement C1q like 1 acts_upstream_of_or_within ISO
IEA 		MGI:5708580 (PMID:25611509)
GO_REF:0000107 		RGD
Ensembl		 PMID:25611509 GO_REF:0000107 NCBI chr10:87,902,125...87,909,556
Ensembl chr10:87,902,137...87,909,310 		JBrowse link
G C3 complement C3 involved_in IEA
ISO 		GO_REF:0000107
(PMID:18083105) 		Ensembl
RGD		 PMID:18083105 GO_REF:0000107 NCBI chr 9:2,087,437...2,114,366
Ensembl chr 9:2,087,437...2,114,429 		JBrowse link
G Cspg4 chondroitin sulfate proteoglycan 4 IDA RGD PMID:12526031 RGD:632591 NCBI chr 8:57,264,962...57,300,010
Ensembl chr 8:57,264,962...57,300,010 		JBrowse link
G Ednra endothelin receptor type A involved_in IEA
ISO 		GO_REF:0000107
MGI:3773699 (PMID:19017795) 		Ensembl
RGD		 PMID:19017795 GO_REF:0000107 NCBI chr19:47,137,360...47,207,961
Ensembl chr19:30,233,571...30,297,049 		JBrowse link
G Epha8 Eph receptor A8 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:17875921) 		UniProt
Ensembl
RGD		 PMID:17875921 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:149,166,107...149,193,515
Ensembl chr 5:149,166,697...149,193,399 		JBrowse link
G Farp2 FERM, ARH/RhoGEF and pleckstrin domain protein 2 acts_upstream_of_or_within ISO
IEA 		(PMID:12351724)
GO_REF:0000107 		RGD
Ensembl		 PMID:12351724 GO_REF:0000107 NCBI chr 9:94,053,650...94,161,982
Ensembl chr 9:94,053,726...94,162,212 		JBrowse link
G Gnaq G protein subunit alpha q acts_upstream_of_or_within ISO MGI:2151661 (PMID:9391157) RGD PMID:9391157 NCBI chr 1:213,425,631...213,671,947
Ensembl chr 1:213,424,465...213,667,672 		JBrowse link
G Kcnq2 potassium voltage-gated channel subfamily Q member 2 acts_upstream_of_or_within ISO MGI:1336181 (PMID:30382937) RGD PMID:30382937 NCBI chr 3:168,194,776...168,253,831
Ensembl chr 3:168,195,357...168,275,071 		JBrowse link
G Kcnq3 potassium voltage-gated channel subfamily Q member 3 acts_upstream_of_or_within ISO
IEA 		MGI:1309503 (PMID:30382937)
GO_REF:0000107 		RGD
Ensembl		 PMID:30382937 GO_REF:0000107 NCBI chr 7:97,730,219...98,025,652
Ensembl chr 7:97,730,465...98,025,653 		JBrowse link
G Ntn4 netrin 4 acts_upstream_of_or_within ISO
IEA 		(PMID:11038171)
GO_REF:0000107 		RGD
Ensembl		 PMID:11038171 GO_REF:0000107 NCBI chr 7:28,186,611...28,300,390
Ensembl chr 7:28,186,611...28,300,390 		JBrowse link
G Pdgfb platelet derived growth factor subunit B acts_upstream_of_or_within ISO MGI:2670574 (PMID:25224828) RGD PMID:25224828 NCBI chr 7:111,539,444...111,557,984
Ensembl chr 7:111,540,345...111,557,984 		JBrowse link
G Rnd1 Rho family GTPase 1 involved_in ISO (PMID:11095956) RGD PMID:11095956 NCBI chr 7:129,821,311...129,828,385
Ensembl chr 7:129,821,311...129,828,399 		JBrowse link
G Scarf1 scavenger receptor class F, member 1 involved_in IBA
ISO
IEA 		GO_REF:0000033
(PMID:18160648)
GO_REF:0000107 		GO_Central
RGD
Ensembl		 PMID:18160648 GO_REF:0000033 GO_REF:0000107 NCBI chr10:60,359,213...60,371,516
Ensembl chr10:60,359,197...60,371,516 		JBrowse link
negative regulation of neuron remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11a BCL11 transcription factor A IMP RGD PMID:19616629 RGD:11100018 NCBI chr14:98,029,018...98,124,181
Ensembl chr14:98,030,461...98,124,180 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20543
    developmental process 7160
      cellular developmental process 4838
        cell maturation 264
          neuron maturation 77
            neuron remodeling 19
              negative regulation of neuron remodeling 1
              positive regulation of neuron remodeling 0
              regulation of neuron remodeling + 1
Path 2
Term Annotations click to browse term
  biological_process 20543
    developmental process 7160
      anatomical structure development 6656
        multicellular organism development 5362
          system development 4644
            nervous system development 2881
              neurogenesis 2127
                generation of neurons 1821
                  neuron differentiation 1741
                    neuron development 1423
                      neuron maturation 77
                        neuron remodeling 19
                          negative regulation of neuron remodeling 1
                          positive regulation of neuron remodeling 0
                          regulation of neuron remodeling + 1
paths to the root