MAMMALIAN PHENOTYPE - ANNOTATIONS
The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term: abnormal aortic arch morphology
Accession: MP:0004113
browse the term
Definition: any structural anomaly of the convex portion of the aorta between the ascending and descending parts of the aorta; branches from it include the brachiocephalic trunk, the left common carotid artery, and the left subclavian artery; the brachiocephalic trunk further splits to form the right subclavian artery and the right common carotid artery
Comment: Note that this term refers to the adult aortic arch structure. For multiple aortic arches present in the embryo, see the term for embryonic aortic arches [abnormal branchial arch artery morphology; MP:0002672].
Synonyms: exact_synonym: abnormal adult aortic arch; abnormal arch of aorta; abnormal arch of the aorta; aortic arch abnormality
xref: Fyler:2700; MA:0000475
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Acvr1
activin A receptor, type 1
IAGP
MGI
PMID:15226263
NCBI chr 2:58,336,450...58,456,840
Ensembl chr 2:58,278,656...58,457,169
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Ap2b1
adaptor-related protein complex 2, beta 1 subunit
IEA
MGI
NCBI chr11:83,189,545...83,295,861
Ensembl chr11:83,189,850...83,295,861
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Apoe
apolipoprotein E
IAGP
MGI
PMID:15653570
NCBI chr 7:19,430,169...19,434,326
Ensembl chr 7:19,430,034...19,433,113
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Bcor
BCL6 interacting corepressor
IAGP
MGI
PMID:32692983
NCBI chr X:11,902,976...12,026,769
Ensembl chr X:11,902,979...12,026,594
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Ccdc39
coiled-coil domain containing 39
IEA
MGI
NCBI chr 3:33,864,906...33,898,473
Ensembl chr 3:33,866,511...33,898,459
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Cfc1
cryptic, EGF-CFC family member 1
IEA
MGI
NCBI chr 1:34,574,729...34,583,392
Ensembl chr 1:34,574,729...34,583,394
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Chrd
chordin
IAGP
MGI
PMID:12810603
NCBI chr16:20,551,528...20,561,132
Ensembl chr16:20,551,877...20,561,134
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Cited2
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
IAGP
MGI
PMID:11694877 PMID:15475956 PMID:15615595
NCBI chr10:17,598,452...17,601,422
Ensembl chr10:17,598,966...17,601,422
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Crkl
v-crk avian sarcoma virus CT10 oncogene homolog-like
IAGP
MGI
PMID:11242111
NCBI chr16:17,269,849...17,305,304
Ensembl chr16:17,269,851...17,305,298
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Cst3
cystatin C
IAGP
MGI
PMID:15653570
NCBI chr 2:148,713,642...148,717,432
Ensembl chr 2:148,713,642...148,717,612
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Daw1
dynein assembly factor with WDR repeat domains 1
IEA
MGI
NCBI chr 1:83,136,610...83,188,298
Ensembl chr 1:83,137,473...83,188,295
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Dnaaf3
dynein, axonemal assembly factor 3
IEA
MGI
NCBI chr 7:4,525,932...4,535,487
Ensembl chr 7:4,525,932...4,535,452
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Dnah5
dynein, axonemal, heavy chain 5
IAGP
MGI
PMID:18037990
NCBI chr15:28,155,000...28,472,191
Ensembl chr15:28,203,898...28,472,198
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Dnai1
dynein axonemal intermediate chain 1
IAGP
MGI
PMID:24306492
NCBI chr 4:41,569,731...41,638,158
Ensembl chr 4:41,569,775...41,638,158
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Drc1
dynein regulatory complex subunit 1
IEA
MGI
NCBI chr 5:30,486,328...30,524,039
Ensembl chr 5:30,486,386...30,524,039
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Efemp2
epidermal growth factor-containing fibulin-like extracellular matrix protein 2
IAGP
MGI
PMID:19855011
NCBI chr19:5,523,974...5,532,548
Ensembl chr19:5,523,982...5,532,545
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Ephb4
Eph receptor B4
IEA
MGI
NCBI chr 5:137,348,371...137,372,784
Ensembl chr 5:137,348,371...137,376,931
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Eya1
EYA transcriptional coactivator and phosphatase 1
IAGP
MGI
PMID:21364285
NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459
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Fgf10
fibroblast growth factor 10
IAGP
MGI
PMID:20035084
NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651
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Fgf8
fibroblast growth factor 8
IAGP
MGI
PMID:12223416 PMID:16696966 PMID:20035084
NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354
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Foxc2
forkhead box C2
IAGP
MGI
PMID:9409679
NCBI chr 8:121,842,910...121,845,634
Ensembl chr 8:121,842,910...121,845,634
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Foxe3
forkhead box E3
IAGP
MGI
PMID:26854927
NCBI chr 4:114,781,640...114,783,264
Ensembl chr 4:114,782,344...114,783,210
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Foxg1
forkhead box G1
IAGP
MGI
PMID:16452092
NCBI chr12:49,429,666...49,433,650
Ensembl chr12:49,429,443...49,433,644
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Foxh1
forkhead box H1
IEA
MGI
NCBI chr15:76,552,029...76,554,286
Ensembl chr15:76,552,425...76,554,148
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Foxq1
forkhead box Q1
IAGP
MGI
PMID:16109771
NCBI chr13:31,742,153...31,744,959
Ensembl chr13:31,740,117...31,744,959
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Gata3
GATA binding protein 3
IAGP
MGI
PMID:18955134
NCBI chr 2:9,861,889...9,894,845
Ensembl chr 2:9,861,889...9,894,845
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Gbx2
gastrulation brain homeobox 2
IAGP
MGI
PMID:15996652
NCBI chr 1:89,855,684...89,858,898
Ensembl chr 1:89,855,678...89,858,901
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H2az2
H2A.Z histone variant 2
IAGP
MGI
PMID:15226263 PMID:16332365 PMID:18058916
NCBI chr11:6,377,226...6,394,511
Ensembl chr11:6,377,229...6,394,443
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Hoxa1
homeobox A1
IAGP
MGI
PMID:21940751
NCBI chr 6:52,132,573...52,135,299
Ensembl chr 6:52,132,570...52,135,297
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Hprt1
hypoxanthine phosphoribosyltransferase 1
IAGP
MGI
PMID:18058916
NCBI chr X:52,076,955...52,110,537
Ensembl chr X:52,077,014...52,110,536
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Ift140
intraflagellar transport 140
IEA
MGI
NCBI chr17:25,235,056...25,318,461
Ensembl chr17:25,235,059...25,318,469
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Ift27
intraflagellar transport 27
IAGP
MGI
PMID:25446516
NCBI chr15:78,043,660...78,058,281
Ensembl chr15:78,043,663...78,058,307
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Isl1
ISL1 transcription factor, LIM/homeodomain
IAGP
MGI
PMID:16687132 PMID:32692983
NCBI chr13:116,434,806...116,446,224
Ensembl chr13:116,434,817...116,446,225
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Kat6a
K(lysine) acetyltransferase 6A
IAGP
MGI
PMID:16651658 PMID:22921202
NCBI chr 8:23,349,458...23,433,275
Ensembl chr 8:23,349,551...23,433,275
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Lrp2
low density lipoprotein receptor-related protein 2
IEA
MGI
NCBI chr 2:69,254,679...69,416,373
Ensembl chr 2:69,254,684...69,416,409
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Matr3
matrin 3
IAGP
MGI
PMID:25574029
NCBI chr18:35,686,462...35,724,526
Ensembl chr18:35,695,191...35,726,888
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Mesp1
mesoderm posterior 1
IAGP
MGI
PMID:16914493 PMID:20035084
NCBI chr 7:79,441,989...79,443,338
Ensembl chr 7:79,441,989...79,443,536
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Nprl3
nitrogen permease regulator-like 3
IAGP
MGI
PMID:22538705
NCBI chr11:32,181,963...32,217,707
Ensembl chr11:32,175,628...32,217,707
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Pax9
paired box 9
IAGP
MGI
PMID:34615475
NCBI chr12:56,738,478...56,759,609
Ensembl chr12:56,738,552...56,759,607
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Pdgfrb
platelet derived growth factor receptor, beta polypeptide
IAGP
MGI
PMID:21664579
NCBI chr18:61,178,194...61,218,139
Ensembl chr18:61,178,222...61,218,133
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Pitx2
paired-like homeodomain transcription factor 2
IAGP
MGI
PMID:17994097
NCBI chr 3:128,993,527...129,013,243
Ensembl chr 3:128,993,527...129,013,240
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Prrx1
paired related homeobox 1
IAGP
MGI
PMID:10664157
NCBI chr 1:163,072,688...163,142,714
Ensembl chr 1:163,072,688...163,141,279
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Prrx2
paired related homeobox 2
IAGP
MGI
PMID:10664157
NCBI chr 2:30,735,076...30,771,263
Ensembl chr 2:30,724,984...30,771,263
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Rere
arginine glutamic acid dipeptide (RE) repeats
IAGP
MGI
PMID:23451234
NCBI chr 4:150,365,372...150,706,423
Ensembl chr 4:150,366,103...150,706,423
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Smo
smoothened, frizzled class receptor
IAGP
MGI
PMID:16687132
NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364
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Sox4
SRY (sex determining region Y)-box 4
IAGP
MGI
PMID:16109771
NCBI chr13:29,132,902...29,137,682
Ensembl chr13:29,132,902...29,137,696
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Tab1
TGF-beta activated kinase 1/MAP3K7 binding protein 1
IEA
MGI
NCBI chr15:80,017,333...80,045,908
Ensembl chr15:80,017,328...80,045,908
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Tbc1d32
TBC1 domain family, member 32
IEA
MGI
NCBI chr10:55,890,389...56,106,495
Ensembl chr10:55,890,389...56,104,785
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Tbx1
T-box 1
IAGP
MGI
PMID:12223416 PMID:15175244 PMID:15469978 PMID:16452092 PMID:16696966 PMID:16914493 PMID:19855134 PMID:22921202 More...
NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421
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Tfap2a
transcription factor AP-2, alpha
IAGP
MGI
PMID:11744375 PMID:19855134
NCBI chr13:40,867,278...40,891,715
Ensembl chr13:40,868,778...40,891,852
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Tgfbr1
transforming growth factor, beta receptor I
IAGP
MGI
PMID:24355923
NCBI chr 4:47,353,258...47,414,926
Ensembl chr 4:47,353,222...47,414,931
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Tgfbr2
transforming growth factor, beta receptor II
IAGP
MGI
PMID:16332365 PMID:24355923
NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428
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Vangl2
VANGL planar cell polarity 2
IAGP
MGI
PMID:11440971
NCBI chr 1:171,828,527...171,856,532
Ensembl chr 1:171,828,527...171,856,011
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Aldh1a2
aldehyde dehydrogenase family 1, subfamily A2
IAGP
MGI
PMID:12563036
NCBI chr 9:71,123,071...71,203,525
Ensembl chr 9:71,123,071...71,203,525
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Cited2
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
IAGP
MGI
PMID:11694877
NCBI chr10:17,598,452...17,601,422
Ensembl chr10:17,598,966...17,601,422
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Crkl
v-crk avian sarcoma virus CT10 oncogene homolog-like
IAGP
MGI
PMID:11242111
NCBI chr16:17,269,849...17,305,304
Ensembl chr16:17,269,851...17,305,298
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Ece1
endothelin converting enzyme 1
IAGP
MGI
PMID:9649553
NCBI chr 4:137,589,548...137,692,540
Ensembl chr 4:137,589,548...137,692,540
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Ednra
endothelin receptor type A
IAGP
MGI
PMID:9649553
NCBI chr 8:78,389,658...78,451,081
Ensembl chr 8:78,389,660...78,451,093
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Fbln1
fibulin 1
IAGP
MGI
PMID:18538758
NCBI chr15:85,090,150...85,170,495
Ensembl chr15:85,090,150...85,170,736
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Fgf10
fibroblast growth factor 10
IAGP
MGI
PMID:20035084
NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651
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Fgf15
fibroblast growth factor 15
IAGP
MGI
PMID:15789410
NCBI chr 7:144,450,269...144,454,690
Ensembl chr 7:144,450,268...144,454,690
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Fgf8
fibroblast growth factor 8
IAGP
MGI
PMID:20035084
NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354
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H2az2
H2A.Z histone variant 2
IAGP
MGI
PMID:19008477
NCBI chr11:6,377,226...6,394,511
Ensembl chr11:6,377,229...6,394,443
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Hand2
heart and neural crest derivatives expressed 2
IAGP
MGI
PMID:19008477
NCBI chr 8:57,774,018...57,777,552
Ensembl chr 8:57,774,018...57,777,668
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Isl1
ISL1 transcription factor, LIM/homeodomain
IAGP
MGI
PMID:34615475
NCBI chr13:116,434,806...116,446,224
Ensembl chr13:116,434,817...116,446,225
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Mesp1
mesoderm posterior 1
IAGP
MGI
PMID:20035084
NCBI chr 7:79,441,989...79,443,338
Ensembl chr 7:79,441,989...79,443,536
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Morc2a
microrchidia 2A
IEA
MGI
NCBI chr11:3,599,132...3,640,477
Ensembl chr11:3,599,191...3,640,477
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Msx1
msh homeobox 1
IAGP
MGI
PMID:34615475
NCBI chr 5:37,977,835...37,981,929
Ensembl chr 5:37,977,829...37,981,927
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Pax9
paired box 9
IAGP
MGI
PMID:34615475
NCBI chr12:56,738,478...56,759,609
Ensembl chr12:56,738,552...56,759,607
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Plxnd1
plexin D1
IAGP
MGI
PMID:15239958
NCBI chr 6:115,931,772...115,972,300
Ensembl chr 6:115,931,772...115,971,966
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Tbx1
T-box 1
IAGP
MGI
PMID:11239417 PMID:15469978 PMID:15789410 PMID:19855134
NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421
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Tfap2a
transcription factor AP-2, alpha
IAGP
MGI
PMID:19855134
NCBI chr13:40,867,278...40,891,715
Ensembl chr13:40,868,778...40,891,852
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Tgfb2
transforming growth factor, beta 2
IAGP
MGI
PMID:11390347
NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186
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Vangl2
VANGL planar cell polarity 2
IAGP
MGI
PMID:18296642
NCBI chr 1:171,828,527...171,856,532
Ensembl chr 1:171,828,527...171,856,011
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Acvr1
activin A receptor, type 1
IAGP
MGI
PMID:15226263
NCBI chr 2:58,336,450...58,456,840
Ensembl chr 2:58,278,656...58,457,169
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Aldh1a2
aldehyde dehydrogenase family 1, subfamily A2
IAGP
MGI
PMID:12563036
NCBI chr 9:71,123,071...71,203,525
Ensembl chr 9:71,123,071...71,203,525
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Bmp4
bone morphogenetic protein 4
IAGP
MGI
PMID:15070745
NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126
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Fbln5
fibulin 5
IAGP
MGI
PMID:11805834
NCBI chr12:101,712,820...101,785,541
Ensembl chr12:101,712,824...101,785,314
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Gja5
gap junction protein, alpha 5
IAGP
MGI
PMID:12842919
NCBI chr 3:96,939,718...96,960,950
Ensembl chr 3:96,812,009...96,984,732
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H2az2
H2A.Z histone variant 2
IAGP
MGI
PMID:15226263 PMID:15741317 PMID:19541608
NCBI chr11:6,377,226...6,394,511
Ensembl chr11:6,377,229...6,394,443
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Nkx2-5
NK2 homeobox 5
IAGP
MGI
PMID:15070745
NCBI chr17:27,057,638...27,063,962
Ensembl chr17:27,057,638...27,063,983
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Nrp1
neuropilin 1
IAGP
MGI
PMID:10518505
NCBI chr 8:129,085,553...129,231,957
Ensembl chr 8:129,085,085...129,229,844
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Prrx1
paired related homeobox 1
IAGP
MGI
PMID:10664157
NCBI chr 1:163,072,688...163,142,714
Ensembl chr 1:163,072,688...163,141,279
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Prrx2
paired related homeobox 2
IAGP
MGI
PMID:10664157
NCBI chr 2:30,735,076...30,771,263
Ensembl chr 2:30,724,984...30,771,263
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Ptpn11
protein tyrosine phosphatase, non-receptor type 11
IAGP
MGI
PMID:19541608
NCBI chr 5:121,268,596...121,329,460
Ensembl chr 5:121,268,596...121,329,460
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Tgfbr2
transforming growth factor, beta receptor II
IAGP
MGI
PMID:15741317
NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428
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Ccne1
cyclin E1
IAGP
MGI
PMID:12941272
NCBI chr 7:37,797,409...37,806,915
Ensembl chr 7:37,797,409...37,806,959
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Ccne2
cyclin E2
IAGP
MGI
PMID:12941272
NCBI chr 4:11,190,489...11,204,781
Ensembl chr 4:11,191,351...11,204,779
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Dicer1
dicer 1, ribonuclease type III
IAGP
MGI
PMID:21098571
NCBI chr12:104,654,001...104,718,331
Ensembl chr12:104,654,001...104,718,211
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Fgf15
fibroblast growth factor 15
IAGP
MGI
PMID:15789410
NCBI chr 7:144,450,269...144,454,690
Ensembl chr 7:144,450,268...144,454,690
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Fgf8
fibroblast growth factor 8
IAGP
MGI
PMID:12223416
NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354
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H2az2
H2A.Z histone variant 2
IAGP
MGI
PMID:21098571
NCBI chr11:6,377,226...6,394,511
Ensembl chr11:6,377,229...6,394,443
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Paxip1
PAX interacting (with transcription-activation domain) protein 1
IAGP
MGI
PMID:18710940
NCBI chr 5:27,947,044...27,999,326
Ensembl chr 5:27,945,078...27,996,689
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Tbx1
T-box 1
IAGP
MGI
PMID:12223416 PMID:15789410
NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421
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Tfap2a
transcription factor AP-2, alpha
IAGP
MGI
PMID:11744375
NCBI chr13:40,867,278...40,891,715
Ensembl chr13:40,868,778...40,891,852
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B9d2
B9 protein domain 2
IEA
MGI
NCBI chr 7:25,380,205...25,385,987
Ensembl chr 7:25,380,205...25,385,983
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Chd7
chromodomain helicase DNA binding protein 7
IAGP
MGI
PMID:19855134
NCBI chr 4:8,690,345...8,868,449
Ensembl chr 4:8,690,406...8,867,659
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Crim1
cysteine rich transmembrane BMP regulator 1
IEA
MGI
NCBI chr17:78,507,602...78,684,021
Ensembl chr17:78,507,677...78,684,021
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Foxc1
forkhead box C1
IAGP
MGI
PMID:10479458
NCBI chr13:31,990,629...31,994,618
Ensembl chr13:31,990,616...31,996,459
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Foxc2
forkhead box C2
IAGP
MGI
PMID:9409679 PMID:10479458
NCBI chr 8:121,842,910...121,845,634
Ensembl chr 8:121,842,910...121,845,634
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Abcc9
ATP-binding cassette, sub-family C member 9
IAGP
MGI
PMID:30089727
NCBI chr 6:142,533,592...142,648,472
Ensembl chr 6:142,533,588...142,648,041
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Kcnj8
potassium inwardly-rectifying channel, subfamily J, member 8
IAGP
MGI
PMID:30089727
NCBI chr 6:142,510,563...142,517,340
Ensembl chr 6:142,510,563...142,517,340
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Thsd4
thrombospondin, type I, domain containing 4
IAGP
MGI
PMID:32855533
NCBI chr 9:59,874,214...60,429,394
Ensembl chr 9:59,874,214...60,429,329
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Cxcr4
C-X-C motif chemokine receptor 4
IEA
MGI
NCBI chr 1:128,515,936...128,520,036
Ensembl chr 1:128,515,936...128,520,030
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Gata4
GATA binding protein 4
IAGP
MGI
PMID:16847256
NCBI chr14:63,436,363...63,509,161
Ensembl chr14:63,436,371...63,509,141
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Gata6
GATA binding protein 6
IAGP
MGI
PMID:16557299 PMID:16847256
NCBI chr18:11,052,510...11,085,636
Ensembl chr18:11,052,064...11,085,635
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H2az2
H2A.Z histone variant 2
IAGP
MGI
PMID:16557299
NCBI chr11:6,377,226...6,394,511
Ensembl chr11:6,377,229...6,394,443
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Matr3
matrin 3
IAGP
MGI
PMID:25574029
NCBI chr18:35,686,462...35,724,526
Ensembl chr18:35,695,191...35,726,888
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Slit2
slit guidance ligand 2
IEA
MGI
NCBI chr 5:48,138,633...48,465,077
Ensembl chr 5:48,140,480...48,465,075
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Tgfb2
transforming growth factor, beta 2
IAGP
MGI
PMID:11390347
NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186
G
Tab1
TGF-beta activated kinase 1/MAP3K7 binding protein 1
IEA
MGI
NCBI chr15:80,017,333...80,045,908
Ensembl chr15:80,017,328...80,045,908
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Lmna
lamin A
IAGP
MGI
PMID:23690466
NCBI chr 3:88,388,455...88,413,842
Ensembl chr 3:88,387,454...88,417,263
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Aldh1a2
aldehyde dehydrogenase family 1, subfamily A2
IAGP
MGI
PMID:12563036
NCBI chr 9:71,123,071...71,203,525
Ensembl chr 9:71,123,071...71,203,525
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Fgf8
fibroblast growth factor 8
IAGP
MGI
PMID:12223416 PMID:21364285
NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354
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Gata3
GATA binding protein 3
IAGP
MGI
PMID:18955134
NCBI chr 2:9,861,889...9,894,845
Ensembl chr 2:9,861,889...9,894,845
G
Six1
sine oculis-related homeobox 1
IAGP
MGI
PMID:21364285
NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661
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Tbx1
T-box 1
IAGP
MGI
PMID:11239417 PMID:12223416 PMID:16696966
NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421
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Vegfa
vascular endothelial growth factor A
IAGP
MGI
PMID:12539040
NCBI chr17:46,327,919...46,343,303
Ensembl chr17:46,327,919...46,343,295
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Aldh1a2
aldehyde dehydrogenase family 1, subfamily A2
IAGP
MGI
PMID:12563036
NCBI chr 9:71,123,071...71,203,525
Ensembl chr 9:71,123,071...71,203,525
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Cxcr4
C-X-C motif chemokine receptor 4
IEA
MGI
NCBI chr 1:128,515,936...128,520,036
Ensembl chr 1:128,515,936...128,520,030
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Ece1
endothelin converting enzyme 1
IAGP
MGI
PMID:9649553
NCBI chr 4:137,589,548...137,692,540
Ensembl chr 4:137,589,548...137,692,540
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Ednra
endothelin receptor type A
IAGP
MGI
PMID:9649553
NCBI chr 8:78,389,658...78,451,081
Ensembl chr 8:78,389,660...78,451,093
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Ift27
intraflagellar transport 27
IAGP
MGI
PMID:25446516
NCBI chr15:78,043,660...78,058,281
Ensembl chr15:78,043,663...78,058,307
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Invs
inversin
IAGP
MGI
PMID:16325766
NCBI chr 4:48,279,707...48,431,956
Ensembl chr 4:48,279,760...48,431,954
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Nrp1
neuropilin 1
IAGP
MGI
PMID:10518505
NCBI chr 8:129,085,553...129,231,957
Ensembl chr 8:129,085,085...129,229,844
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Pcsk5
proprotein convertase subtilisin/kexin type 5
IEA
MGI
NCBI chr19:17,409,678...17,815,076
Ensembl chr19:17,409,683...17,814,996
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Pitx2
paired-like homeodomain transcription factor 2
IAGP
MGI
PMID:12397115
NCBI chr 3:128,993,527...129,013,243
Ensembl chr 3:128,993,527...129,013,240
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Tbx1
T-box 1
IAGP
MGI
PMID:11242110 PMID:15469978 PMID:16696966
NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421
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Vangl2
VANGL planar cell polarity 2
IAGP
MGI
PMID:11440971
NCBI chr 1:171,828,527...171,856,532
Ensembl chr 1:171,828,527...171,856,011
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Vegfa
vascular endothelial growth factor A
IAGP
MGI
PMID:12539040
NCBI chr17:46,327,919...46,343,303
Ensembl chr17:46,327,919...46,343,295
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Dhx35
DEAH-box helicase 35
IEA
MGI
NCBI chr 2:158,636,674...158,700,141
Ensembl chr 2:158,636,727...158,700,134
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Pdzk1
PDZ domain containing 1
IEA
MGI
NCBI chr 3:96,736,772...96,778,242
Ensembl chr 3:96,736,600...96,778,242
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Atmin
ATM interactor
IAGP
MGI
PMID:19235720 PMID:25294941
NCBI chr 8:117,670,132...117,687,184
Ensembl chr 8:117,670,132...117,687,184
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Bmpr2
bone morphogenetic protein receptor type 2
IAGP
MGI
PMID:12441304
NCBI chr 1:59,802,721...59,917,240
Ensembl chr 1:59,802,559...59,918,173
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Ccdc39
coiled-coil domain containing 39
IEA
MGI
NCBI chr 3:33,864,906...33,898,473
Ensembl chr 3:33,866,511...33,898,459
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Chd7
chromodomain helicase DNA binding protein 7
IAGP
MGI
PMID:19855134
NCBI chr 4:8,690,345...8,868,449
Ensembl chr 4:8,690,406...8,867,659
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Cited2
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
IAGP
MGI
PMID:15475956
NCBI chr10:17,598,452...17,601,422
Ensembl chr10:17,598,966...17,601,422
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Crkl
v-crk avian sarcoma virus CT10 oncogene homolog-like
IAGP
MGI
PMID:11242111
NCBI chr16:17,269,849...17,305,304
Ensembl chr16:17,269,851...17,305,298
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Dnah11
dynein, axonemal, heavy chain 11
IAGP
MGI
PMID:20511334
NCBI chr12:117,841,717...118,162,778
Ensembl chr12:117,841,717...118,162,778
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Dnah5
dynein, axonemal, heavy chain 5
IAGP
MGI
PMID:18037990
NCBI chr15:28,155,000...28,472,191
Ensembl chr15:28,203,898...28,472,198
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Drc1
dynein regulatory complex subunit 1
IEA
MGI
NCBI chr 5:30,486,328...30,524,039
Ensembl chr 5:30,486,386...30,524,039
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Dynll1
dynein light chain LC8-type 1
IAGP
MGI
PMID:25294941
NCBI chr 5:115,435,129...115,438,995
Ensembl chr 5:115,435,169...115,439,058
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Ece1
endothelin converting enzyme 1
IAGP
MGI
PMID:9449665
NCBI chr 4:137,589,548...137,692,540
Ensembl chr 4:137,589,548...137,692,540
G
Eya1
EYA transcriptional coactivator and phosphatase 1
IAGP
MGI
PMID:21364285
NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459
G
Fgf15
fibroblast growth factor 15
IAGP
MGI
PMID:15789410
NCBI chr 7:144,450,269...144,454,690
Ensembl chr 7:144,450,268...144,454,690
G
Fgf8
fibroblast growth factor 8
IAGP
MGI
PMID:21364285
NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354
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Flna
filamin, alpha
IAGP
MGI
PMID:17172441
NCBI chr X:73,267,067...73,293,787
Ensembl chr X:73,267,067...73,293,426
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Foxc1
forkhead box C1
IAGP
MGI
PMID:10479458
NCBI chr13:31,990,629...31,994,618
Ensembl chr13:31,990,616...31,996,459
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Gata3
GATA binding protein 3
IAGP
MGI
PMID:18955134
NCBI chr 2:9,861,889...9,894,845
Ensembl chr 2:9,861,889...9,894,845
G
Gata6
GATA binding protein 6
IAGP
MGI
PMID:16557299
NCBI chr18:11,052,510...11,085,636
Ensembl chr18:11,052,064...11,085,635
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H2az2
H2A.Z histone variant 2
IAGP
MGI
PMID:16557299 PMID:17172441 PMID:18058916 PMID:19008477
NCBI chr11:6,377,226...6,394,511
Ensembl chr11:6,377,229...6,394,443
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Hand2
heart and neural crest derivatives expressed 2
IAGP
MGI
PMID:19008477
NCBI chr 8:57,774,018...57,777,552
Ensembl chr 8:57,774,018...57,777,668
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Hprt1
hypoxanthine phosphoribosyltransferase 1
IAGP
MGI
PMID:18058916
NCBI chr X:52,076,955...52,110,537
Ensembl chr X:52,077,014...52,110,536
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Isl1
ISL1 transcription factor, LIM/homeodomain
IAGP
MGI
PMID:34615475
NCBI chr13:116,434,806...116,446,224
Ensembl chr13:116,434,817...116,446,225
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Kif7
kinesin family member 7
IEA
MGI
NCBI chr 7:79,347,846...79,365,520
Ensembl chr 7:79,347,846...79,365,468
G
Lama5
laminin, alpha 5
IEA
MGI
NCBI chr 2:179,818,166...179,867,652
Ensembl chr 2:179,818,166...179,867,652
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Ltbp1
latent transforming growth factor beta binding protein 1
IAGP
MGI
PMID:17804598
NCBI chr17:75,312,475...75,699,507
Ensembl chr17:75,312,563...75,699,507
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Matr3
matrin 3
IAGP
MGI
PMID:25574029
NCBI chr18:35,686,462...35,724,526
Ensembl chr18:35,695,191...35,726,888
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Mecom
MDS1 and EVI1 complex locus
IAGP
MGI
PMID:24586749
NCBI chr 3:30,005,445...30,563,937
Ensembl chr 3:30,005,445...30,602,157
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Mrtfb
myocardin related transcription factor B
IAGP
MGI
PMID:15951419
NCBI chr16:13,073,913...13,235,393
Ensembl chr16:13,074,345...13,235,393
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Msx1
msh homeobox 1
IAGP
MGI
PMID:34615475
NCBI chr 5:37,977,835...37,981,929
Ensembl chr 5:37,977,829...37,981,927
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Ndst1
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
IEA
MGI
NCBI chr18:60,817,566...60,907,465
Ensembl chr18:60,817,566...60,881,722
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Nprl3
nitrogen permease regulator-like 3
IAGP
MGI
PMID:22538705
NCBI chr11:32,181,963...32,217,707
Ensembl chr11:32,175,628...32,217,707
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Pax9
paired box 9
IAGP
MGI
PMID:34615475
NCBI chr12:56,738,478...56,759,609
Ensembl chr12:56,738,552...56,759,607
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Ripply3
ripply transcriptional repressor 3
IAGP
MGI
PMID:21177346
NCBI chr16:94,129,281...94,137,794
Ensembl chr16:94,129,279...94,137,794
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Sema3c
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
IAGP
MGI
PMID:11688556 PMID:15548583
NCBI chr 5:17,779,814...17,935,266
Ensembl chr 5:17,779,279...17,935,266
G
Six1
sine oculis-related homeobox 1
IAGP
MGI
PMID:21364285
NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661
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Sox4
SRY (sex determining region Y)-box 4
IAGP
MGI
PMID:18477811
NCBI chr13:29,132,902...29,137,682
Ensembl chr13:29,132,902...29,137,696
G
Tbx1
T-box 1
IAGP
MGI
PMID:11239417 PMID:15469978 PMID:15789410 PMID:16696966 PMID:19855134
NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421
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Tfap2a
transcription factor AP-2, alpha
IAGP
MGI
PMID:11744375
NCBI chr13:40,867,278...40,891,715
Ensembl chr13:40,868,778...40,891,852
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Tgfb2
transforming growth factor, beta 2
IAGP
MGI
PMID:11390347
NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186
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Tmem67
transmembrane protein 67
IEA
MGI
NCBI chr 4:12,039,355...12,090,020
Ensembl chr 4:12,039,363...12,090,020
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Zic3
zinc finger protein of the cerebellum 3
IAGP
MGI
PMID:11959836
NCBI chr X:57,075,988...57,081,990
Ensembl chr X:57,068,060...57,087,096
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Bmp4
bone morphogenetic protein 4
IAGP
MGI
PMID:15070745
NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126
G
Brd2
bromodomain containing 2
IEA
MGI
NCBI chr17:34,330,993...34,341,581
Ensembl chr17:34,330,997...34,341,608
G
Chd7
chromodomain helicase DNA binding protein 7
IAGP
MGI
PMID:19855134 PMID:26102480 PMID:33127760
NCBI chr 4:8,690,345...8,868,449
Ensembl chr 4:8,690,406...8,867,659
G
Drc1
dynein regulatory complex subunit 1
IEA
MGI
NCBI chr 5:30,486,328...30,524,039
Ensembl chr 5:30,486,386...30,524,039
G
E2f1
E2F transcription factor 1
IAGP
MGI
PMID:33127760
NCBI chr 2:154,401,320...154,411,812
Ensembl chr 2:154,401,327...154,411,812
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Ermp1
endoplasmic reticulum metallopeptidase 1
IEA
MGI
NCBI chr19:29,587,276...29,625,815
Ensembl chr19:29,585,614...29,625,815
G
Eya1
EYA transcriptional coactivator and phosphatase 1
IAGP
MGI
PMID:21364285
NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459
G
Fgf8
fibroblast growth factor 8
IAGP
MGI
PMID:12223416 PMID:14623825 PMID:15996652
NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354
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Foxc1
forkhead box C1
IAGP
MGI
PMID:10479458
NCBI chr13:31,990,629...31,994,618
Ensembl chr13:31,990,616...31,996,459
G
Foxc2
forkhead box C2
IAGP
MGI
PMID:9409679 PMID:10479458 PMID:26299482
NCBI chr 8:121,842,910...121,845,634
Ensembl chr 8:121,842,910...121,845,634
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Gbx2
gastrulation brain homeobox 2
IAGP
MGI
PMID:15996652
NCBI chr 1:89,855,684...89,858,898
Ensembl chr 1:89,855,678...89,858,901
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Gt(ROSA)26Sor
gene trap ROSA 26, Philippe Soriano
IAGP
MGI
PMID:33127760
NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294
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H2az2
H2A.Z histone variant 2
IAGP
MGI
PMID:16332365 PMID:18058916
NCBI chr11:6,377,226...6,394,511
Ensembl chr11:6,377,229...6,394,443
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Hoxa1
homeobox A1
IAGP
MGI
PMID:21940751
NCBI chr 6:52,132,573...52,135,299
Ensembl chr 6:52,132,570...52,135,297
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Hprt1
hypoxanthine phosphoribosyltransferase 1
IAGP
MGI
PMID:18058916
NCBI chr X:52,076,955...52,110,537
Ensembl chr X:52,077,014...52,110,536
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Isl1
ISL1 transcription factor, LIM/homeodomain
IAGP
MGI
PMID:23437302
NCBI chr13:116,434,806...116,446,224
Ensembl chr13:116,434,817...116,446,225
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Jun
jun proto-oncogene
IAGP
MGI
PMID:23437302
NCBI chr 4:94,937,273...94,940,459
Ensembl chr 4:94,937,271...94,940,459
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Kat6a
K(lysine) acetyltransferase 6A
IAGP
MGI
PMID:22921202
NCBI chr 8:23,349,458...23,433,275
Ensembl chr 8:23,349,551...23,433,275
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Mesp1
mesoderm posterior 1
IAGP
MGI
PMID:26102480
NCBI chr 7:79,441,989...79,443,338
Ensembl chr 7:79,441,989...79,443,536
G
Msx1
msh homeobox 1
IAGP
MGI
PMID:34615475
NCBI chr 5:37,977,835...37,981,929
Ensembl chr 5:37,977,829...37,981,927
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Nkx2-5
NK2 homeobox 5
IAGP
MGI
PMID:15070745 PMID:26299482
NCBI chr17:27,057,638...27,063,962
Ensembl chr17:27,057,638...27,063,983
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Pax9
paired box 9
IAGP
MGI
PMID:34615475
NCBI chr12:56,738,478...56,759,609
Ensembl chr12:56,738,552...56,759,607
G
Sema3c
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
IAGP
MGI
PMID:11688556
NCBI chr 5:17,779,814...17,935,266
Ensembl chr 5:17,779,279...17,935,266
G
Six1
sine oculis-related homeobox 1
IAGP
MGI
PMID:21364285
NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661
G
Smg9
SMG9 nonsense mediated mRNA decay factor
IEA
MGI
NCBI chr 7:24,099,106...24,122,197
Ensembl chr 7:24,099,044...24,122,203
G
Ssr2
signal sequence receptor, beta
IEA
MGI
NCBI chr 3:88,486,915...88,495,727
Ensembl chr 3:88,483,183...88,495,726
G
Tab1
TGF-beta activated kinase 1/MAP3K7 binding protein 1
IEA
MGI
NCBI chr15:80,017,333...80,045,908
Ensembl chr15:80,017,328...80,045,908
G
Tbx1
T-box 1
IAGP
MGI
PMID:12223416 PMID:22921202
NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421
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Tfap2a
transcription factor AP-2, alpha
IAGP
MGI
PMID:11744375 PMID:14623825
NCBI chr13:40,867,278...40,891,715
Ensembl chr13:40,868,778...40,891,852
G
Tgfb2
transforming growth factor, beta 2
IAGP
MGI
PMID:11390347
NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186
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Tgfbr2
transforming growth factor, beta receptor II
IAGP
MGI
PMID:16332365
NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428
G
Vegfa
vascular endothelial growth factor A
IAGP
MGI
PMID:12539040
NCBI chr17:46,327,919...46,343,303
Ensembl chr17:46,327,919...46,343,295
G
H2az2
H2A.Z histone variant 2
IAGP
MGI
PMID:18058916
NCBI chr11:6,377,226...6,394,511
Ensembl chr11:6,377,229...6,394,443
G
Hprt1
hypoxanthine phosphoribosyltransferase 1
IAGP
MGI
PMID:18058916
NCBI chr X:52,076,955...52,110,537
Ensembl chr X:52,077,014...52,110,536
G
Sema3c
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
IAGP
MGI
PMID:11688556
NCBI chr 5:17,779,814...17,935,266
Ensembl chr 5:17,779,279...17,935,266
G
Dnah11
dynein, axonemal, heavy chain 11
IEA
MGI
NCBI chr12:117,841,717...118,162,778
Ensembl chr12:117,841,717...118,162,778
G
Ece1
endothelin converting enzyme 1
IAGP
MGI
PMID:9649553
NCBI chr 4:137,589,548...137,692,540
Ensembl chr 4:137,589,548...137,692,540
G
Vegfa
vascular endothelial growth factor A
IAGP
MGI
PMID:12539040
NCBI chr17:46,327,919...46,343,303
Ensembl chr17:46,327,919...46,343,295
G
4933434E20Rik
RIKEN cDNA 4933434E20 gene
IEA
MGI
NCBI chr 3:89,958,941...89,969,754
Ensembl chr 3:89,958,943...89,970,648 Ensembl chr 3:89,958,943...89,970,648
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Acvr1
activin A receptor, type 1
IAGP
MGI
PMID:15226263
NCBI chr 2:58,336,450...58,456,840
Ensembl chr 2:58,278,656...58,457,169
G
Brd2
bromodomain containing 2
IEA
MGI
NCBI chr17:34,330,993...34,341,581
Ensembl chr17:34,330,997...34,341,608
G
Chrd
chordin
IAGP
MGI
PMID:12810603
NCBI chr16:20,551,528...20,561,132
Ensembl chr16:20,551,877...20,561,134
G
Chtop
chromatin target of PRMT1
IEA
MGI
NCBI chr 3:90,405,846...90,417,400
Ensembl chr 3:90,406,263...90,416,805
G
Cmip
c-Maf inducing protein
IEA
MGI
NCBI chr 8:117,983,758...118,188,245
Ensembl chr 8:117,983,803...118,186,169
G
Col4a2
collagen, type IV, alpha 2
IEA
MGI
NCBI chr 8:11,362,878...11,499,287
Ensembl chr 8:11,362,805...11,499,287
G
Eya1
EYA transcriptional coactivator and phosphatase 1
IAGP
MGI
PMID:21364285
NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459
G
Fbln1
fibulin 1
IAGP
MGI
PMID:18538758
NCBI chr15:85,090,150...85,170,495
Ensembl chr15:85,090,150...85,170,736
G
Fgf8
fibroblast growth factor 8
IAGP
MGI
PMID:14623825 PMID:15996652
NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354
G
Foxg1
forkhead box G1
IAGP
MGI
PMID:16452092
NCBI chr12:49,429,666...49,433,650
Ensembl chr12:49,429,443...49,433,644
G
Gata6
GATA binding protein 6
IAGP
MGI
PMID:16557299
NCBI chr18:11,052,510...11,085,636
Ensembl chr18:11,052,064...11,085,635
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Gbx2
gastrulation brain homeobox 2
IAGP
MGI
PMID:15996652
NCBI chr 1:89,855,684...89,858,898
Ensembl chr 1:89,855,678...89,858,901
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Gt(ROSA)26Sor
gene trap ROSA 26, Philippe Soriano
IAGP
MGI
PMID:20570943
NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294
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H13
histocompatibility 13
IEA
MGI
NCBI chr 2:152,511,292...152,550,590
Ensembl chr 2:152,511,381...152,550,590
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H2az2
H2A.Z histone variant 2
IAGP
MGI
PMID:15226263 PMID:16332365 PMID:16557299 PMID:17499702 PMID:18058916 PMID:19008477 More...
NCBI chr11:6,377,226...6,394,511
Ensembl chr11:6,377,229...6,394,443
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Hand2
heart and neural crest derivatives expressed 2
IAGP
MGI
PMID:19008477
NCBI chr 8:57,774,018...57,777,552
Ensembl chr 8:57,774,018...57,777,668
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Hoxa1
homeobox A1
IAGP
MGI
PMID:21940751
NCBI chr 6:52,132,573...52,135,299
Ensembl chr 6:52,132,570...52,135,297
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Hprt1
hypoxanthine phosphoribosyltransferase 1
IAGP
MGI
PMID:18058916
NCBI chr X:52,076,955...52,110,537
Ensembl chr X:52,077,014...52,110,536
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Isl1
ISL1 transcription factor, LIM/homeodomain
IAGP
MGI
PMID:23437302
NCBI chr13:116,434,806...116,446,224
Ensembl chr13:116,434,817...116,446,225
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Itga5
integrin alpha 5 (fibronectin receptor alpha)
IAGP
MGI
PMID:20570943
NCBI chr15:103,252,713...103,275,218
Ensembl chr15:103,252,713...103,275,190
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Itgav
integrin alpha V
IAGP
MGI
PMID:20570943
NCBI chr 2:83,554,796...83,637,261
Ensembl chr 2:83,554,741...83,637,260
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Jag1
jagged 1
IAGP
MGI
PMID:21068062
NCBI chr 2:136,923,371...136,958,440
Ensembl chr 2:136,923,376...136,958,564
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Jun
jun proto-oncogene
IAGP
MGI
PMID:23437302
NCBI chr 4:94,937,273...94,940,459
Ensembl chr 4:94,937,271...94,940,459
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Kat6a
K(lysine) acetyltransferase 6A
IAGP
MGI
PMID:22921202
NCBI chr 8:23,349,458...23,433,275
Ensembl chr 8:23,349,551...23,433,275
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Myo9a
myosin IXa
IEA
MGI
NCBI chr 9:59,658,128...59,836,149
Ensembl chr 9:59,658,179...59,836,149
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Nsun2
NOL1/NOP2/Sun domain family member 2
IEA
MGI
NCBI chr13:69,760,135...69,783,899
Ensembl chr13:69,681,865...69,783,899
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Pax3
paired box 3
IAGP
MGI
PMID:2619088
NCBI chr 1:78,077,904...78,173,773
Ensembl chr 1:78,077,904...78,173,771
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Pdgfra
platelet derived growth factor receptor, alpha polypeptide
IAGP
MGI
PMID:17499702
NCBI chr 5:75,311,988...75,358,867
Ensembl chr 5:75,312,953...75,358,876
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Pdgfrb
platelet derived growth factor receptor, beta polypeptide
IAGP
MGI
PMID:17499702
NCBI chr18:61,178,194...61,218,139
Ensembl chr18:61,178,222...61,218,133
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Prmt7
protein arginine N-methyltransferase 7
IEA
MGI
NCBI chr 8:106,937,686...106,978,326
Ensembl chr 8:106,937,568...106,979,426
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Prrx1
paired related homeobox 1
IAGP
MGI
PMID:10664157
NCBI chr 1:163,072,688...163,142,714
Ensembl chr 1:163,072,688...163,141,279
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Prrx2
paired related homeobox 2
IAGP
MGI
PMID:10664157
NCBI chr 2:30,735,076...30,771,263
Ensembl chr 2:30,724,984...30,771,263
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Rala
v-ral simian leukemia viral oncogene A (ras related)
IEA
MGI
NCBI chr13:18,055,160...18,118,802
Ensembl chr13:18,055,156...18,118,824
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Sec24b
SEC24 homolog B, COPII coat complex component
IAGP
MGI
PMID:20215345
NCBI chr 3:129,776,408...129,855,248
Ensembl chr 3:129,776,408...129,855,202
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Six1
sine oculis-related homeobox 1
IAGP
MGI
PMID:21364285
NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661
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Tbx1
T-box 1
IAGP
MGI
PMID:11239417 PMID:11971873 PMID:16452092 PMID:16696966 PMID:22921202
NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421
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Tcf7l2
transcription factor 7 like 2, T cell specific, HMG box
IEA
MGI
NCBI chr19:55,730,227...55,922,091
Ensembl chr19:55,730,252...55,922,086
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Tfap2a
transcription factor AP-2, alpha
IAGP
MGI
PMID:11744375 PMID:14623825
NCBI chr13:40,867,278...40,891,715
Ensembl chr13:40,868,778...40,891,852
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Tgfbr2
transforming growth factor, beta receptor II
IAGP
MGI
PMID:16332365
NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428
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Vangl1
VANGL planar cell polarity 1
IAGP
MGI
PMID:18296642
NCBI chr 3:102,060,899...102,112,012
Ensembl chr 3:102,060,899...102,112,009
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Vangl2
VANGL planar cell polarity 2
IAGP
MGI
PMID:18296642
NCBI chr 1:171,828,527...171,856,532
Ensembl chr 1:171,828,527...171,856,011
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Vegfa
vascular endothelial growth factor A
IAGP
MGI
PMID:12539040
NCBI chr17:46,327,919...46,343,303
Ensembl chr17:46,327,919...46,343,295
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4933434E20Rik
RIKEN cDNA 4933434E20 gene
IEA
MGI
NCBI chr 3:89,958,941...89,969,754
Ensembl chr 3:89,958,943...89,970,648 Ensembl chr 3:89,958,943...89,970,648
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Aldh1a2
aldehyde dehydrogenase family 1, subfamily A2
IAGP
MGI
PMID:12563036
NCBI chr 9:71,123,071...71,203,525
Ensembl chr 9:71,123,071...71,203,525
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Amn
amnionless
IEA
MGI
NCBI chr12:111,237,530...111,242,860
Ensembl chr12:111,237,529...111,242,860
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Ap2b1
adaptor-related protein complex 2, beta 1 subunit
IEA
MGI
NCBI chr11:83,189,545...83,295,861
Ensembl chr11:83,189,850...83,295,861
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Atmin
ATM interactor
IAGP
MGI
PMID:19235720
NCBI chr 8:117,670,132...117,687,184
Ensembl chr 8:117,670,132...117,687,184
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Cfap45
cilia and flagella associated protein 45
IAGP
MGI
PMID:33139725
NCBI chr 1:172,348,697...172,373,437
Ensembl chr 1:172,348,368...172,373,437
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Cfc1
cryptic, EGF-CFC family member 1
IAGP
MGI
PMID:10521397
NCBI chr 1:34,574,729...34,583,392
Ensembl chr 1:34,574,729...34,583,394
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Chrd
chordin
IAGP
MGI
PMID:12810603
NCBI chr16:20,551,528...20,561,132
Ensembl chr16:20,551,877...20,561,134
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Chtop
chromatin target of PRMT1
IEA
MGI
NCBI chr 3:90,405,846...90,417,400
Ensembl chr 3:90,406,263...90,416,805
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Cited2
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
IAGP
MGI
PMID:15475956 PMID:15615595 PMID:18440989
NCBI chr10:17,598,452...17,601,422
Ensembl chr10:17,598,966...17,601,422
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Cplane1
ciliogenesis and planar polarity effector 1
IAGP
MGI
PMID:25877302
NCBI chr15:8,198,509...8,300,642
Ensembl chr15:8,198,590...8,300,642
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Cxcr4
C-X-C motif chemokine receptor 4
IEA
MGI
NCBI chr 1:128,515,936...128,520,036
Ensembl chr 1:128,515,936...128,520,030
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Daw1
dynein assembly factor with WDR repeat domains 1
IEA
MGI
NCBI chr 1:83,136,610...83,188,298
Ensembl chr 1:83,137,473...83,188,295
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Dhx35
DEAH-box helicase 35
IEA
MGI
NCBI chr 2:158,636,674...158,700,141
Ensembl chr 2:158,636,727...158,700,134
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Dnaaf11
dynein axonemal assembly factor 11
IAGP
MGI
PMID:27353389
NCBI chr15:66,251,707...66,372,769
Ensembl chr15:66,251,707...66,372,759
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Dnaaf3
dynein, axonemal assembly factor 3
IEA
MGI
NCBI chr 7:4,525,932...4,535,487
Ensembl chr 7:4,525,932...4,535,452
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Dnah11
dynein, axonemal, heavy chain 11
IEA
MGI
NCBI chr12:117,841,717...118,162,778
Ensembl chr12:117,841,717...118,162,778
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Dnah5
dynein, axonemal, heavy chain 5
IEA
MGI
NCBI chr15:28,155,000...28,472,191
Ensembl chr15:28,203,898...28,472,198
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Edil3
EGF-like repeats and discoidin I-like domains 3
IAGP
MGI
PMID:18440989
NCBI chr13:88,969,591...89,471,344
Ensembl chr13:88,969,591...89,471,342
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Ermp1
endoplasmic reticulum metallopeptidase 1
IEA
MGI
NCBI chr19:29,587,276...29,625,815
Ensembl chr19:29,585,614...29,625,815
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Eya1
EYA transcriptional coactivator and phosphatase 1
IAGP
MGI
PMID:21364285
NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459
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Fgf10
fibroblast growth factor 10
IAGP
MGI
PMID:20035084
NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651
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Fgf8
fibroblast growth factor 8
IAGP
MGI
PMID:12223416 PMID:14623825 PMID:15996652 PMID:20035084
NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354
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Foxh1
forkhead box H1
IEA
MGI
NCBI chr15:76,552,029...76,554,286
Ensembl chr15:76,552,425...76,554,148
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Foxj1
forkhead box J1
IAGP
MGI
PMID:16325766
NCBI chr11:116,221,530...116,226,331
Ensembl chr11:116,221,530...116,226,225
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Frem2
Fras1 related extracellular matrix protein 2
IEA
MGI
NCBI chr 3:53,421,359...53,566,014
Ensembl chr 3:53,421,359...53,564,776
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Fuz
fuzzy planar cell polarity protein
IEA
MGI
NCBI chr 7:44,545,517...44,552,053
Ensembl chr 7:44,545,503...44,552,055
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Gbx2
gastrulation brain homeobox 2
IAGP
MGI
PMID:15996652
NCBI chr 1:89,855,684...89,858,898
Ensembl chr 1:89,855,678...89,858,901
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H2az2
H2A.Z histone variant 2
IAGP
MGI
PMID:18058916
NCBI chr11:6,377,226...6,394,511
Ensembl chr11:6,377,229...6,394,443
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Hoxa1
homeobox A1
IAGP
MGI
PMID:21940751
NCBI chr 6:52,132,573...52,135,299
Ensembl chr 6:52,132,570...52,135,297
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Hprt1
hypoxanthine phosphoribosyltransferase 1
IAGP
MGI
PMID:18058916
NCBI chr X:52,076,955...52,110,537
Ensembl chr X:52,077,014...52,110,536
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Ift140
intraflagellar transport 140
IEA
MGI
NCBI chr17:25,235,056...25,318,461
Ensembl chr17:25,235,059...25,318,469
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Invs
inversin
IAGP
MGI
PMID:16325766
NCBI chr 4:48,279,707...48,431,956
Ensembl chr 4:48,279,760...48,431,954
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Isl1
ISL1 transcription factor, LIM/homeodomain
IAGP
MGI
PMID:16687132
NCBI chr13:116,434,806...116,446,224
Ensembl chr13:116,434,817...116,446,225
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Jun
jun proto-oncogene
IAGP
MGI
PMID:10352021
NCBI chr 4:94,937,273...94,940,459
Ensembl chr 4:94,937,271...94,940,459
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Lama5
laminin, alpha 5
IEA
MGI
NCBI chr 2:179,818,166...179,867,652
Ensembl chr 2:179,818,166...179,867,652
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Lefty1
left right determination factor 1
IAGP
MGI
PMID:9708731
NCBI chr 1:180,762,587...180,765,966
Ensembl chr 1:180,762,587...180,765,965
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Lrp2
low density lipoprotein receptor-related protein 2
IEA
MGI
NCBI chr 2:69,254,679...69,416,373
Ensembl chr 2:69,254,684...69,416,409
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Ltbp1
latent transforming growth factor beta binding protein 1
IAGP
MGI
PMID:17804598
NCBI chr17:75,312,475...75,699,507
Ensembl chr17:75,312,563...75,699,507
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Megf8
multiple EGF-like-domains 8
IAGP
MGI
PMID:18043505
NCBI chr 7:25,016,589...25,065,342
Ensembl chr 7:25,016,589...25,065,342
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Meox2
mesenchyme homeobox 2
IAGP
MGI
PMID:18519639
NCBI chr12:37,158,539...37,229,533
Ensembl chr12:37,158,539...37,229,533
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Mesp1
mesoderm posterior 1
IAGP
MGI
PMID:20035084
NCBI chr 7:79,441,989...79,443,338
Ensembl chr 7:79,441,989...79,443,536
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Mgrn1
mahogunin, ring finger 1
IAGP
MGI
PMID:17075880
NCBI chr16:4,703,964...4,756,160
Ensembl chr16:4,704,113...4,756,160
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Mks1
MKS transition zone complex subunit 1
IAGP
MGI
PMID:21045211
NCBI chr11:87,744,007...87,754,629
Ensembl chr11:87,744,041...87,754,629
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Morc2a
microrchidia 2A
IEA
MGI
NCBI chr11:3,599,132...3,640,477
Ensembl chr11:3,599,191...3,640,477
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Mrtfb
myocardin related transcription factor B
IAGP
MGI
PMID:15951419
NCBI chr16:13,073,913...13,235,393
Ensembl chr16:13,074,345...13,235,393
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Ndst1
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
IEA
MGI
NCBI chr18:60,817,566...60,907,465
Ensembl chr18:60,817,566...60,881,722
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Nprl3
nitrogen permease regulator-like 3
IAGP
MGI
PMID:22538705
NCBI chr11:32,181,963...32,217,707
Ensembl chr11:32,175,628...32,217,707
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Nrp1
neuropilin 1
IAGP
MGI
PMID:10518505
NCBI chr 8:129,085,553...129,231,957
Ensembl chr 8:129,085,085...129,229,844
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Odad2
outer dynein arm docking complex subunit 2
IAGP
MGI
PMID:23849778
NCBI chr18:7,088,233...7,298,272
Ensembl chr18:7,088,209...7,297,936
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Pcsk5
proprotein convertase subtilisin/kexin type 5
IAGP
MGI
PMID:18519639
NCBI chr19:17,409,678...17,815,076
Ensembl chr19:17,409,683...17,814,996
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Pdgfrb
platelet derived growth factor receptor, beta polypeptide
IEA
MGI
NCBI chr18:61,178,194...61,218,139
Ensembl chr18:61,178,222...61,218,133
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Pigv
phosphatidylinositol glycan anchor biosynthesis, class V
IEA
MGI
NCBI chr 4:133,387,071...133,401,498
Ensembl chr 4:133,387,698...133,399,958
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Pitx2
paired-like homeodomain transcription factor 2
IAGP
MGI
PMID:12397115 PMID:15475956
NCBI chr 3:128,993,527...129,013,243
Ensembl chr 3:128,993,527...129,013,240
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Plxnd1
plexin D1
IAGP
MGI
PMID:15239958 PMID:18992737
NCBI chr 6:115,931,772...115,972,300
Ensembl chr 6:115,931,772...115,971,966
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Prdm1
PR domain containing 1, with ZNF domain
IEA
MGI
NCBI chr10:44,313,170...44,404,579
Ensembl chr10:44,313,173...44,404,497
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Prrc2b
proline-rich coiled-coil 2B
IEA
MGI
NCBI chr 2:32,041,002...32,124,549
Ensembl chr 2:32,041,094...32,124,549
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Psme4
proteasome (prosome, macropain) activator subunit 4
IEA
MGI
NCBI chr11:30,721,753...30,831,150
Ensembl chr11:30,721,726...30,830,361
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Rara
retinoic acid receptor, alpha
IAGP
MGI
PMID:9240560 PMID:9376317
NCBI chr11:98,818,626...98,865,768
Ensembl chr11:98,818,644...98,865,768
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Rarb
retinoic acid receptor, beta
IAGP
MGI
PMID:9240560
NCBI chr14:5,387,365...6,038,924
Ensembl chr14:5,650,540...6,038,924
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Rarg
retinoic acid receptor, gamma
IAGP
MGI
PMID:9376317
NCBI chr15:102,143,373...102,165,891
Ensembl chr15:102,143,373...102,165,952
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Rere
arginine glutamic acid dipeptide (RE) repeats
IAGP
MGI
PMID:23451234
NCBI chr 4:150,365,372...150,706,423
Ensembl chr 4:150,366,103...150,706,423
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Rpgrip1l
Rpgrip1-like
IEA
MGI
NCBI chr 8:91,943,658...92,039,919
Ensembl chr 8:91,943,658...92,039,890
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Setd5
SET domain containing 5
IEA
MGI
NCBI chr 6:113,054,326...113,130,393
Ensembl chr 6:113,054,326...113,130,396
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Shoc2
Shoc2, leucine rich repeat scaffold protein
IAGP
MGI
PMID:20549726
NCBI chr19:53,932,018...54,021,711
Ensembl chr19:53,932,737...54,021,564
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Six1
sine oculis-related homeobox 1
IAGP
MGI
PMID:21364285
NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661
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Smo
smoothened, frizzled class receptor
IAGP
MGI
PMID:16687132
NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364
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Tbc1d32
TBC1 domain family, member 32
IEA
MGI
NCBI chr10:55,890,389...56,106,495
Ensembl chr10:55,890,389...56,104,785
G
Tbx1
T-box 1
IAGP
MGI
PMID:11242110 PMID:12223416 PMID:15190012 PMID:15469978
NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421
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Tfap2a
transcription factor AP-2, alpha
IAGP
MGI
PMID:14623825
NCBI chr13:40,867,278...40,891,715
Ensembl chr13:40,868,778...40,891,852
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Tulp4
TUB like protein 4
IAGP
MGI
PMID:38115643
NCBI chr17:6,156,528...6,290,912
Ensembl chr17:6,156,712...6,301,403
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Vangl2
VANGL planar cell polarity 2
IAGP
MGI
PMID:11440971
NCBI chr 1:171,828,527...171,856,532
Ensembl chr 1:171,828,527...171,856,011
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Vegfa
vascular endothelial growth factor A
IAGP
MGI
PMID:12539040
NCBI chr17:46,327,919...46,343,303
Ensembl chr17:46,327,919...46,343,295
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Zic2
zinc finger protein of the cerebellum 2
IAGP
MGI
PMID:29992973
NCBI chr14:122,712,796...122,717,740
Ensembl chr14:122,712,847...122,717,264
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Zic3
zinc finger protein of the cerebellum 3
IAGP
MGI
PMID:11959836 PMID:23184148
NCBI chr X:57,075,988...57,081,990
Ensembl chr X:57,068,060...57,087,096
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Amn
amnionless
IEA
MGI
NCBI chr12:111,237,530...111,242,860
Ensembl chr12:111,237,529...111,242,860
G
Ccdc39
coiled-coil domain containing 39
IEA
MGI
NCBI chr 3:33,864,906...33,898,473
Ensembl chr 3:33,866,511...33,898,459
G
Cfc1
cryptic, EGF-CFC family member 1
IEA
MGI
NCBI chr 1:34,574,729...34,583,392
Ensembl chr 1:34,574,729...34,583,394
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Cited2
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
IAGP
MGI
PMID:15615595
NCBI chr10:17,598,452...17,601,422
Ensembl chr10:17,598,966...17,601,422
G
Dnah11
dynein, axonemal, heavy chain 11
IEA
MGI
NCBI chr12:117,841,717...118,162,778
Ensembl chr12:117,841,717...118,162,778
G
Dnah5
dynein, axonemal, heavy chain 5
IEA
MGI
NCBI chr15:28,155,000...28,472,191
Ensembl chr15:28,203,898...28,472,198
G
Dnm2
dynamin 2
IEA
MGI
NCBI chr 9:21,336,167...21,419,055
Ensembl chr 9:21,336,204...21,419,055
G
Ephb4
Eph receptor B4
IEA
MGI
NCBI chr 5:137,348,371...137,372,784
Ensembl chr 5:137,348,371...137,376,931
G
Ermp1
endoplasmic reticulum metallopeptidase 1
IEA
MGI
NCBI chr19:29,587,276...29,625,815
Ensembl chr19:29,585,614...29,625,815
G
Eya1
EYA transcriptional coactivator and phosphatase 1
IAGP
MGI
PMID:21364285
NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459
G
Foxh1
forkhead box H1
IEA
MGI
NCBI chr15:76,552,029...76,554,286
Ensembl chr15:76,552,425...76,554,148
G
Gt(ROSA)26Sor
gene trap ROSA 26, Philippe Soriano
IAGP
MGI
PMID:20570943
NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294
G
Itga5
integrin alpha 5 (fibronectin receptor alpha)
IAGP
MGI
PMID:20570943
NCBI chr15:103,252,713...103,275,218
Ensembl chr15:103,252,713...103,275,190
G
Itgav
integrin alpha V
IAGP
MGI
PMID:20570943
NCBI chr 2:83,554,796...83,637,261
Ensembl chr 2:83,554,741...83,637,260
G
Lama5
laminin, alpha 5
IEA
MGI
NCBI chr 2:179,818,166...179,867,652
Ensembl chr 2:179,818,166...179,867,652
G
Lrp2
low density lipoprotein receptor-related protein 2
IEA
MGI
NCBI chr 2:69,254,679...69,416,373
Ensembl chr 2:69,254,684...69,416,409
G
Ltbp1
latent transforming growth factor beta binding protein 1
IEA
MGI
NCBI chr17:75,312,475...75,699,507
Ensembl chr17:75,312,563...75,699,507
G
Meox2
mesenchyme homeobox 2
IAGP
MGI
PMID:18519639
NCBI chr12:37,158,539...37,229,533
Ensembl chr12:37,158,539...37,229,533
G
Ndst1
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
IEA
MGI
NCBI chr18:60,817,566...60,907,465
Ensembl chr18:60,817,566...60,881,722
G
Pcsk5
proprotein convertase subtilisin/kexin type 5
IAGP
MGI
PMID:18519639
NCBI chr19:17,409,678...17,815,076
Ensembl chr19:17,409,683...17,814,996
G
Pdgfrb
platelet derived growth factor receptor, beta polypeptide
IEA
MGI
NCBI chr18:61,178,194...61,218,139
Ensembl chr18:61,178,222...61,218,133
G
Pigv
phosphatidylinositol glycan anchor biosynthesis, class V
IEA
MGI
NCBI chr 4:133,387,071...133,401,498
Ensembl chr 4:133,387,698...133,399,958
G
Plxnd1
plexin D1
IEA
MGI
NCBI chr 6:115,931,772...115,972,300
Ensembl chr 6:115,931,772...115,971,966
G
Prdm1
PR domain containing 1, with ZNF domain
IEA
MGI
NCBI chr10:44,313,170...44,404,579
Ensembl chr10:44,313,173...44,404,497
G
Qsox1
quiescin Q6 sulfhydryl oxidase 1
IEA
MGI
NCBI chr 1:155,653,901...155,688,645
Ensembl chr 1:155,651,775...155,688,635
G
Six1
sine oculis-related homeobox 1
IAGP
MGI
PMID:21364285
NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661
G
Slit2
slit guidance ligand 2
IEA
MGI
NCBI chr 5:48,138,633...48,465,077
Ensembl chr 5:48,140,480...48,465,075
G
Tbc1d32
TBC1 domain family, member 32
IEA
MGI
NCBI chr10:55,890,389...56,106,495
Ensembl chr10:55,890,389...56,104,785
G
Vangl2
VANGL planar cell polarity 2
IAGP
MGI
PMID:11440971
NCBI chr 1:171,828,527...171,856,532
Ensembl chr 1:171,828,527...171,856,011
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