Vegfa (vascular endothelial growth factor A) - Rat Genome Database

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Gene: Vegfa (vascular endothelial growth factor A) Mus musculus
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Symbol: Vegfa
Name: vascular endothelial growth factor A
RGD ID: 731073
MGI Page MGI
Description: Enables chemoattractant activity. Involved in several processes, including circulatory system development; generation of neurons; and regulation of signal transduction. Acts upstream of or within several processes, including circulatory system development; eye development; and mammary gland development. Located in cytoplasm; extracellular space; and nucleus. Is expressed in several structures, including alimentary system; brain; egg cylinder; genitourinary system; and heart. Used to study DiGeorge syndrome; amyotrophic lateral sclerosis type 1; and newborn respiratory distress syndrome. Human ortholog(s) of this gene implicated in several diseases, including artery disease (multiple); autoimmune disease (multiple); gastrointestinal system cancer (multiple); hematologic cancer (multiple); and reproductive organ cancer (multiple). Orthologous to human VEGFA (vascular endothelial growth factor A).
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: L-VEGF; V; vascular endothelial growth factor 165b; vascular endothelial growth factor A, long form; vascular permeability factor; Veg; Vegf; Vegf-a; VEGF12; Vegf120; VEGF16; Vegf164; VEGF18; Vegf188; Vpf
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391746,327,919 - 46,343,303 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1746,327,919 - 46,343,295 (-)EnsemblGRCm39 Ensembl
GRCm381746,016,993 - 46,032,377 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1746,016,993 - 46,032,369 (-)EnsemblGRCm38mm10GRCm38
MGSCv371746,153,942 - 46,169,326 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361745,480,574 - 45,495,331 (-)NCBIMGSCv36mm8
Celera1749,448,065 - 49,463,499 (-)NCBICelera
Cytogenetic Map17CNCBI
cM Map1722.79NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
acoustic neuroma  (ISO)
acute chest syndrome  (ISO)
acute kidney failure  (ISO)
Acute Lung Injury  (ISO)
acute myeloid leukemia  (ISO)
adenocarcinoma  (ISO)
adhesions of uterus  (ISO)
adult-onset Still's disease  (ISO)
Alcoholic Liver Diseases  (ISO)
allergic contact dermatitis  (ISO)
Alzheimer's disease  (ISO)
amyotrophic lateral sclerosis  (ISO)
amyotrophic lateral sclerosis type 1  (IAGP)
angiosarcoma  (ISO)
Arteriovenous Fistula  (ISO)
arteriovenous malformations of the brain  (ISO)
asthma  (ISO)
atherosclerosis  (IDA,ISO)
atrial fibrillation  (ISO)
attention deficit hyperactivity disorder  (ISO)
autoimmune hepatitis  (ISO)
Behcet's disease  (ISO)
blindness  (IMP)
brain edema  (ISO)
brain glioma  (ISO)
Brain Hypoxia-Ischemia  (ISO)
Brain Injuries  (ISO)
Brain Neoplasms  (ISO)
Breast Neoplasms  (ISO)
bullous pemphigoid  (ISO)
Cardiomegaly  (IGI)
cardiomyopathy  (IDA)
Cerebral Hemorrhage  (ISO)
cervix uteri carcinoma in situ  (ISO)
Chemical and Drug Induced Liver Injury  (ISO)
cholangiocarcinoma  (ISO)
cholesteatoma  (ISO)
cholesteatoma of middle ear  (ISO)
Choroidal Neovascularization  (IMP,ISO)
Chronic Bronchitis  (ISO)
chronic fatigue syndrome  (ISO)
Chronic Intermittent Hypoxia  (ISO)
chronic myeloid leukemia  (ISO)
chronic obstructive pulmonary disease  (ISO)
clear cell renal cell carcinoma  (ISO)
colon cancer  (ISO)
colon carcinoma  (ISO)
Colonic Neoplasms  (IMP,ISO)
colorectal cancer  (ISO)
congenital diaphragmatic hernia  (ISO)
congenital heart disease  (ISO)
congestive heart failure  (ISO)
contact dermatitis  (ISO)
corneal neovascularization  (IEP,IMP,ISO)
coronary artery disease  (ISO)
Coronary Disease  (ISO)
COVID-19  (ISO)
Crohn's disease  (ISO)
decubitus ulcer  (ISO)
dermatitis herpetiformis  (ISO)
Diabetes Complications  (ISO)
diabetic angiopathy  (ISO)
Diabetic Nephropathies  (ISO)
diabetic neuropathy  (ISO)
diabetic retinopathy  (ISO)
DiGeorge syndrome  (IAGP)
disease of cellular proliferation  (ISO)
Drug-Related Side Effects and Adverse Reactions  (ISO)
ductal carcinoma in situ  (ISO)
duodenal ulcer  (ISO)
Endometrial Neoplasms  (ISO)
endometriosis  (ISO)
erythema multiforme  (ISO)
Experimental Arthritis  (ISO)
Experimental Autoimmune Encephalomyelitis  (ISO)
Experimental Colitis  (IEP)
Experimental Diabetes Mellitus  (IEP,ISO)
Experimental Liver Cirrhosis  (ISO)
Experimental Mammary Neoplasms  (ISO)
Experimental Neoplasms  (ISO)
extrinsic allergic alveolitis  (ISO)
gastric ulcer  (ISO)
genetic disease  (ISO)
gingivitis  (ISO)
glaucoma  (ISO)
glioblastoma  (ISO)
gliosarcoma  (ISO)
glomerulonephritis  (ISO)
Glomus Tympanicum Tumor  (ISO)
graft-versus-host disease  (ISO)
granulosa cell tumor  (ISO)
Graves' disease  (ISO)
Head and Neck Neoplasms  (ISO)
heart disease  (ISO)
Hemorrhage  (ISO)
hepatocellular carcinoma  (IMP,ISO)
hepatopulmonary syndrome  (ISO)
Hypercholesterolemia  (ISO)
Hyperplasia  (ISO)
hypertension  (ISO)
impotence  (ISO)
Infantile Capillary Hemangioma  (ISO)
infantile Refsum disease  (ISO)
Inflammation  (ISO)
inflammatory bowel disease  (ISO)
intracranial aneurysm  (ISO)
Invasive Pulmonary Aspergillosis  (ISO)
inverted papilloma  (ISO)
ischemic colitis  (ISO)
Kawasaki disease  (ISO)
Kuhnt-Junius degeneration  (ISO)
larynx cancer  (ISO)
learning disability  (ISO)
limb ischemia  (ISO)
liver cirrhosis  (ISO)
Liver Failure  (ISO)
Liver Metastasis  (ISO)
Liver Reperfusion Injury  (ISO)
lung disease  (ISO)
lung non-small cell carcinoma  (ISO)
Lymphatic Metastasis  (IMP,ISO)
macular degeneration  (ISO)
macular retinal edema  (ISO)
melanoma  (ISO)
Memory Disorders  (ISO)
Metabolic Syndrome  (ISO)
middle cerebral artery infarction  (ISO)
multiple myeloma  (ISO)
myeloid leukemia  (ISO)
myocardial infarction  (ISO)
Myocardial Ischemia  (ISO)
Myocardial Reperfusion Injury  (ISO)
Nasal Polyps  (ISO)
nasopharynx carcinoma  (ISO)
Neoplasm Metastasis  (ISO)
Neoplasm Recurrence, Local  (ISO)
Neoplastic Cell Transformation  (ISO)
neovascular glaucoma  (ISO)
Neovascularization, Pathologic  (ISO)
Nerve Degeneration  (ISO)
neurofibromatosis 1  (ISO)
neurofibrosarcoma  (ISO)
newborn respiratory distress syndrome  (IAGP)
opiate dependence  (ISO)
oral squamous cell carcinoma  (ISO)
osteochondrodysplasia  (ISO)
osteosarcoma  (ISO)
otitis media  (IEP)
Otitis Media with Effusion  (ISO)
ovarian hyperstimulation syndrome  (ISO)
Ovarian Neoplasms  (ISO)
Oxygen-Induced Retinopathy  (IEP,ISO)
pancreatic ductal carcinoma  (ISO)
Periodontal Atrophy  (ISO)
polyarteritis nodosa  (ISO)
polycystic ovary syndrome  (ISO)
Polypoidal Choroidal Vasculopathy  (ISO)
portal hypertension  (ISO)
pre-eclampsia  (ISO)
pre-malignant neoplasm  (ISO)
Pregnancy in Diabetics  (ISO)
primary biliary cholangitis  (ISO)
primary sclerosing cholangitis  (ISO)
proliferative diabetic retinopathy  (ISO)
prostate cancer  (ISO)
Prostatic Neoplasms  (ISO)
proteinuria  (ISO)
pseudoxanthoma elasticum  (ISO)
psoriasis  (IMP,ISO)
pterygium  (ISO)
pulmonary edema  (ISO)
pulmonary hypertension  (IEP)
renal cell carcinoma  (ISO)
renal Wilms' tumor  (ISO)
respiratory allergy  (ISO)
Retina Reperfusion Injury  (ISO)
retinal disease  (ISO)
retinal ischemia  (ISO)
Retinal Neovascularization  (IEP,IMP,ISO)
retinal telangiectasia  (ISO)
retinal vein occlusion  (ISO)
retinitis pigmentosa  (ISO)
retinopathy of prematurity  (ISO)
rhabdomyosarcoma  (ISO)
rheumatoid arthritis  (ISO)
rhinitis  (ISO)
Right Ventricular Hypertrophy  (ISO)
Seasonal Allergic Rhinitis  (ISO)
seminoma  (ISO)
Skin Neoplasms  (IMP)
Small-For-Size Syndrome  (ISO)
Spinal Cord Injuries  (ISO)
squamous cell carcinoma  (ISO)
status epilepticus  (ISO)
Stroke  (ISO)
sudden infant death syndrome  (ISO)
systemic scleroderma  (ISO)
temporal lobe epilepsy  (ISO)
Thrombotic Microangiopathies  (ISO)
Tongue Neoplasms  (ISO)
Tympanic Membrane Perforation  (ISO)
type 2 diabetes mellitus  (ISO)
ulcerative colitis  (ISO)
urinary bladder cancer  (ISO)
Urologic Neoplasms  (ISO)
Uterine Cervical Neoplasms  (ISO)
uveal melanoma  (ISO)
Ventricular Remodeling  (ISO)
vestibular schwannomatosis  (IMP,ISO)
Wounds and Injuries  (ISO)
Zellweger syndrome  (ISO)

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-Nornicotine  (ISO)
(+)-pilocarpine  (ISO)
(-)-anisomycin  (ISO)
(-)-demecolcine  (ISO)
(-)-epigallocatechin 3-gallate  (EXP,ISO)
(-)-noscapine  (ISO)
(1->4)-beta-D-glucan  (EXP)
(25R)-cholest-5-ene-3beta,26-diol  (ISO)
(2E,4E)-hexa-2,4-dienoic acid  (EXP)
(E)-cinnamyl alcohol  (ISO)
(R)-lipoic acid  (EXP,ISO)
(R)-noradrenaline  (EXP)
(S)-naringenin  (EXP)
(S)-nicotine  (EXP,ISO)
(S)-ropivacaine  (ISO)
1'-acetoxychavicol acetate  (ISO)
1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane  (ISO)
1,10-phenanthroline  (EXP,ISO)
1,2-dimethylhydrazine  (EXP,ISO)
1,3-benzothiazole-2-thiol  (ISO)
1,4-phenylenediamine  (ISO)
1-(5-isoquinolinesulfonyl)-2-methylpiperazine  (EXP)
1-[(2,3,4-trimethoxyphenyl)methyl]piperazine  (ISO)
1-chloro-2,4-dinitrobenzene  (ISO)
1-naphthyl isothiocyanate  (ISO)
1-octadec-9-enoylglycero-3-phosphate  (ISO)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (EXP,ISO)
17beta-hydroxy-5alpha-androstan-3-one  (EXP,ISO)
1H-1,2,4-triazole  (ISO)
2,2'-bipyridine  (ISO)
2,2-bis(hydroxymethyl)-1-azabicyclo[2.2.2]octan-3-one  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3-Bis(3-hydroxybenzyl)butane-1,4-diol  (ISO)
2,4,6-trinitrobenzenesulfonic acid  (EXP,ISO)
2,4-D  (ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (ISO)
2,6-di-tert-butyl-4-methylphenol  (EXP)
2-[cyclohexyl(oxo)methyl]-3,6,7,11b-tetrahydro-1H-pyrazino[2,1-a]isoquinolin-4-one  (EXP)
2-acetamidofluorene  (ISO)
2-amino-2-deoxy-D-galactopyranose  (ISO)
2-amino-2-deoxy-D-glucopyranose  (ISO)
2-chloroethanol  (EXP)
2-Hydroxy-6-(8,11,14-pentadecatrienyl)benzoic acid  (ISO)
2-hydroxyethyl methacrylate  (ISO)
2-hydroxypropanoic acid  (ISO)
2-methoxy-17beta-estradiol  (EXP,ISO)
2-nitrofluorene  (ISO)
2-tert-butylhydroquinone  (ISO)
2-trans,6-trans,10-trans-geranylgeranyl diphosphate  (ISO)
26-hydroxycholesterol  (ISO)
3',5'-cyclic AMP  (EXP)
3',5'-cyclic GMP  (ISO)
3'-amino-3'-deoxy-N(6),N(6)-dimethyladenosine  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
3,3',5-triiodo-L-thyronine  (EXP)
3,4-dihydroxybenzoic acid  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
3-\{1-[3-(dimethylamino)propyl]-1H-indol-3-yl\}-4-(1H-indol-3-yl)-1H-pyrrole-2,5-dione  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (EXP)
3-methylcholanthrene  (EXP)
3H-1,2-dithiole-3-thione  (ISO)
4,4'-diaminodiphenylmethane  (EXP)
4,4'-sulfonyldiphenol  (EXP,ISO)
4-(ethoxymethylene)-2-phenyloxazol-5-one  (EXP)
4-(N-nitrosomethylamino)-1-(3-pyridyl)butan-1-one  (ISO)
4-hydroperoxycyclophosphamide  (EXP)
4-hydroxy-17beta-estradiol  (ISO)
4-hydroxynon-2-enal  (EXP)
4-hydroxyphenyl retinamide  (EXP,ISO)
4-methylumbelliferyl acetate  (ISO)
4-phenylbutyric acid  (ISO)
4-tert-Octylphenol  (ISO)
4-vinylcyclohexene dioxide  (EXP)
5-(2-methylpiperazine-1-sulfonyl)isoquinoline  (EXP)
5-aza-2'-deoxycytidine  (ISO)
5-chloro-7-iodoquinolin-8-ol  (EXP,ISO)
5-fluorouracil  (EXP,ISO)
6-anilino-5,8-quinolinedione  (ISO)
6-propyl-2-thiouracil  (ISO)
7,12-dimethyltetraphene  (EXP,ISO)
7,8-diacetoxy-4-methylcoumarin  (ISO)
7,9-dihydro-1H-purine-2,6,8(3H)-trione  (ISO)
7-ketocholesterol  (ISO)
8-Br-cAMP  (EXP,ISO)
8-bromo-3',5'-cyclic GMP  (ISO)
9-cis-retinoic acid  (ISO)
AACOCF3  (EXP,ISO)
acetamide  (ISO)
acetic acid  (ISO)
acetylsalicylic acid  (EXP,ISO)
acrolein  (EXP,ISO)
acrylamide  (EXP,ISO)
actinomycin D  (ISO)
adenosine  (ISO)
afimoxifene  (ISO)
aflatoxin B1  (EXP,ISO)
Aflatoxin G1  (EXP)
AICA ribonucleotide  (ISO)
albendazole  (ISO)
alclometasone dipropionate  (ISO)
aldehydo-D-glucosamine  (ISO)
aldehydo-D-glucose  (EXP,ISO)
alexidine  (ISO)
all-trans-retinoic acid  (EXP,ISO)
allantoin  (ISO)
alliin  (ISO)
alpha-hexylcinnamaldehyde  (ISO)
alpha-naphthoflavone  (EXP,ISO)
alpha-pinene  (ISO)
aluminium atom  (ISO)
aluminium oxide  (ISO)
aluminium(0)  (ISO)
alvocidib  (ISO)
AM-251  (ISO)
amiloride  (ISO)
amino acid  (ISO)
amiodarone  (ISO)
amitriptyline  (EXP)
amitrole  (ISO)
ammonium chloride  (ISO)
amphetamine  (ISO)
ampicillin  (ISO)
anandamide  (EXP)
androgen antagonist  (ISO)
andrographolide  (ISO)
anthra[1,9-cd]pyrazol-6(2H)-one  (ISO)
anthracene-1,8,9-triol  (EXP)
antimycin A  (ISO)
ANTU  (ISO)
apigenin  (ISO)
arachidonic acid  (EXP,ISO)
arachidonyl-2'-chloroethylamide  (ISO)
aripiprazole  (ISO)
aristolochic acid A  (ISO)
Aroclor 1254  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenic trichloride  (ISO)
arsenite(3-)  (EXP,ISO)
arsenous acid  (EXP,ISO)
artesunate  (ISO)
asbestos  (ISO)
aspartame  (ISO)
atrazine  (ISO)
auraptene  (ISO)
Auriculasin  (ISO)
avobenzone  (ISO)
axitinib  (ISO)
Azaspiracid  (ISO)
azoxystrobin  (ISO)
bacitracin  (ISO)
baicalein  (ISO)
Bardoxolone methyl  (EXP,ISO)
beclomethasone  (ISO)
benazepril  (ISO)
benzene  (ISO)
benzethonium chloride  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzoic acid  (EXP)
berberine  (ISO)
beta-D-glucosamine  (ISO)
betamethasone  (ISO)
bexarotene  (ISO)
biphenyl-2-ol  (EXP)
bis(2-chloroethyl) sulfide  (EXP,ISO)
bis(2-ethylhexyl) phthalate  (EXP,ISO)
bisdemethoxycurcumin  (ISO)
bisphenol A  (EXP,ISO)
Bisphenol A diglycidyl ether  (EXP,ISO)
bleomycin A2  (ISO)
borrelidin  (ISO)
bortezomib  (ISO)
BQ 123  (EXP)
brefeldin A  (EXP,ISO)
bromocriptine  (ISO)
bucladesine  (ISO)
budesonide  (EXP,ISO)
bufalin  (ISO)
butan-1-ol  (ISO)
butanal  (ISO)
butein  (ISO)
butylated hydroxyanisole  (EXP)
Butylbenzyl phthalate  (ISO)
Butylparaben  (ISO)
butyric acid  (ISO)
C60 fullerene  (ISO)
cadmium atom  (EXP,ISO)
cadmium dichloride  (EXP,ISO)
caesium chloride  (ISO)
caffeine  (EXP)
Calcimycin  (EXP,ISO)
Calcitonin gene-related peptide 1  (ISO)
calcitriol  (ISO)
calcium atom  (ISO)
calcium dichloride  (EXP)
calcium silicate  (ISO)
calcium(0)  (ISO)
camptothecin  (ISO)
candesartan  (EXP,ISO)
canertinib  (ISO)
cannabidiol  (EXP,ISO)
capecitabine  (ISO)
capsaicin  (EXP,ISO)
captopril  (EXP)
carbamazepine  (ISO)
carbon disulfide  (EXP)
carbon nanotube  (EXP,ISO)
carnosine  (ISO)
carvone  (EXP,ISO)
casticin  (EXP)
catechol  (EXP)
celecoxib  (EXP,ISO)
cephaeline  (ISO)
cetrorelix  (ISO)
CGP 12177  (EXP)
CGS-21680  (ISO)
chalcones  (ISO)
Chebulagic acid  (ISO)
chetomin  (ISO)
chitin  (ISO)
chloroethene  (EXP)
chloromethylisothiazolinone  (ISO)
chlorpromazine  (ISO)
chlorpyrifos  (EXP,ISO)
cholesterol  (ISO)
cholic acid  (EXP)
choline  (EXP)
chondroitin sulfate  (ISO)
chromium(6+)  (EXP,ISO)
chrysin  (ISO)
ciglitazone  (ISO)
cinnamyl alcohol  (ISO)
cis-caffeic acid  (EXP)
cisplatin  (EXP,ISO)
citral  (ISO)
citric acid  (ISO)
clofibrate  (EXP)
cloricromen  (ISO)
clotrimazole  (ISO)
cobalt atom  (EXP,ISO)
cobalt dichloride  (EXP,ISO)
cobalt(2+) sulfate  (EXP,ISO)
cocaine  (ISO)
colforsin daropate hydrochloride  (EXP)
copper atom  (EXP,ISO)
copper(0)  (EXP,ISO)
copper(II) chloride  (ISO)
copper(II) sulfate  (ISO)
cordycepin  (ISO)
corosolic acid  (EXP)
corticosterone  (EXP,ISO)
cortisol  (ISO)
coumarin  (ISO)
coumarin 460  (ISO)
coumestrol  (ISO)
crocidolite asbestos  (EXP,ISO)
CU-O LINKAGE  (ISO)
cucurbitacin I  (ISO)
curcumin  (EXP,ISO)
Curcumol  (EXP,ISO)
cyanidin cation  (ISO)
cycloheximide  (EXP,ISO)
cyclophosphamide  (EXP,ISO)
cyclosporin A  (EXP,ISO)
cyfluthrin  (ISO)
D-glucose  (EXP,ISO)
dacarbazine  (ISO)
daidzein 7-O-beta-D-glucoside  (EXP)
DAPT  (EXP)
daunorubicin  (ISO)
DDT  (ISO)
deguelin  (ISO)
delphinidin  (ISO)
demethoxycurcumin  (ISO)
dequalinium  (ISO)
dermatan sulfate  (ISO)
desferrioxamine B  (EXP,ISO)
dexamethasone  (EXP,ISO)
dextran sulfate  (EXP)
diallyl trisulfide  (ISO)
diarsenic trioxide  (EXP,ISO)
diazepam  (EXP)
diazinon  (ISO)
dibenziodolium  (EXP,ISO)
dibutyl phthalate  (ISO)
diclofenac  (ISO)
dieldrin  (ISO)
diethyl maleate  (ISO)
diethylstilbestrol  (ISO)
digitoxigenin  (ISO)
digoxigenin  (ISO)
digoxin  (ISO)
Dihydrotanshinone I  (ISO)
diisononyl phthalate  (EXP)
dimethyl-(phenylmethyl)-[2-[2-[4-(2,4,4-trimethylpentan-2-yl)phenoxy]ethoxy]ethyl]ammonium  (ISO)
dimethylarsinic acid  (EXP,ISO)
dinophysistoxin 1  (ISO)
dioscin  (ISO)
diosgenin  (ISO)
dioxygen  (EXP,ISO)
dipyridamole  (ISO)
disodium selenite  (EXP,ISO)
divanadium pentaoxide  (ISO)
dobutamine  (EXP,ISO)
dopamine  (ISO)
dorsomorphin  (ISO)
doxazosin  (ISO)
doxorubicin  (EXP,ISO)
DuP 697  (ISO)
edaravone  (ISO)
ellagic acid  (ISO)
embelin  (ISO)
emetine  (ISO)
emodin  (ISO)
enalapril  (ISO)
endosulfan  (ISO)
Enterolactone  (ISO)
entinostat  (ISO)
enzacamene  (ISO)
eriodictyol  (ISO)
erythrosin B  (EXP)
estriol  (ISO)
estrogen  (ISO)
ethanol  (EXP,ISO)
ethionamide  (ISO)
ethylenediaminetetraacetic acid  (ISO)
ethylisopropylamiloride  (ISO)
eticlopride(1+)  (ISO)
etoposide  (ISO)
fasudil  (EXP)
febuxostat  (ISO)
fenbendazole  (ISO)
fenofibrate  (EXP)
fenpyroximate  (ISO)
fenvalerate  (EXP)
ferulic acid  (EXP)
fingolimod hydrochloride  (EXP)
fisetin  (ISO)
flavanones  (ISO)
fludrocortisone  (ISO)
fluoranthene  (EXP)
fluorometholone  (ISO)
fluoxetine  (EXP,ISO)
folic acid  (EXP,ISO)
folpet  (EXP)
formaldehyde  (ISO)
formic acid  (ISO)
fosinopril  (EXP)
fructose  (ISO)
fulvestrant  (ISO)
fumonisin B1  (EXP)
furan  (ISO)
furosemide  (ISO)
gadodiamide hydrate  (ISO)
gadolinium trichloride  (ISO)
galangin  (ISO)
galaxolide  (ISO)
gallic acid  (ISO)
gamma-hexachlorocyclohexane  (ISO)
Garcinol  (ISO)
gefitinib  (EXP,ISO)
gemcitabine  (EXP,ISO)
Genipin  (ISO)
genistein  (EXP,ISO)
gentamycin  (ISO)
geranial  (ISO)
geraniol  (ISO)
glucose  (EXP,ISO)
glutathione  (ISO)
glycidol  (ISO)
glycyrrhetinate  (ISO)
glycyrrhetinic acid  (ISO)
glyphosate  (ISO)
Goe 6976  (ISO)
gossypol  (EXP)
guggulsterone  (ISO)
GW 1929  (ISO)
harmaline  (EXP)
heparan sulfate  (ISO)
heparin  (ISO)
herbimycin  (ISO)
hesperidin  (ISO)
HET0016  (ISO)
hexachlorobenzene  (EXP,ISO)
hexaconazole  (EXP)
homocysteine  (EXP,ISO)
Honokiol  (ISO)
hyaluronic acid  (ISO)
hydrogen peroxide  (EXP,ISO)
hydroquinone  (ISO)
hydroxytyrosol  (ISO)
ibuprofen  (ISO)
icariside II  (ISO)
ICI 118551  (ISO)
idelalisib  (EXP,ISO)
ifosfamide  (EXP)
imidacloprid  (ISO)
imidurea  (ISO)
indole-3-methanol  (EXP)
indometacin  (EXP,ISO)
iodixanol  (EXP)
isobutyl nitrite  (EXP)
isoprenaline  (EXP,ISO)
isotretinoin  (ISO)
juglone  (ISO)
kaempferide  (ISO)
kaempferol  (ISO)
kainic acid  (EXP)
ketoconazole  (ISO)
L-ascorbic acid  (ISO)
L-methionine  (EXP)
lanatoside C  (ISO)
lapatinib  (ISO)
lead diacetate  (ISO)
lead(0)  (ISO)
leflunomide  (ISO)
letrozole  (EXP)
leuprolide  (ISO)
levonorgestrel  (ISO)
linoleic acid  (ISO)
lipoic acid  (EXP,ISO)
lipopolysaccharide  (EXP,ISO)
lisinopril dihydrate  (ISO)
lithium atom  (ISO)
lithium chloride  (EXP,ISO)
lithium hydride  (ISO)
lithocholic acid  (EXP)
loliolide  (ISO)
losartan  (EXP,ISO)
luteolin  (ISO)
LY294002  (EXP,ISO)
lycopene  (ISO)
lycorine  (ISO)
Magnolol  (ISO)
maneb  (EXP)
manganese atom  (ISO)
manganese(0)  (ISO)
manganese(II) chloride  (EXP,ISO)
mangiferin  (ISO)
manumycin A  (ISO)
maslinic acid  (EXP)
masoprocol  (ISO)
mebendazole  (ISO)
meclocycline  (ISO)
medroxyprogesterone acetate  (ISO)
melatonin  (ISO)
melittin  (ISO)
mercury dibromide  (ISO)
mesalamine  (ISO)
metformin  (ISO)
methamphetamine  (ISO)
methapyrilene  (ISO)
methidathion  (EXP)
methionine sulfoximine  (ISO)
methotrexate  (EXP,ISO)
methoxychlor  (ISO)
methyl caffeate  (EXP)
methylarsonic acid  (EXP)
Methylbenzethonium chloride  (ISO)
methylglyoxal  (EXP)
methylisothiazolinone  (ISO)
methylmercury chloride  (ISO)
metoprolol  (ISO)
metyrapone  (ISO)
mevalonic acid  (ISO)
Mezerein  (EXP)
mibolerone  (ISO)
microcystin-LR  (EXP,ISO)
mifepristone  (ISO)
minocycline  (ISO)
MK-2206  (ISO)
mono(2-ethylhexyl) phthalate  (ISO)
monocrotaline  (EXP,ISO)
monosodium L-glutamate  (ISO)
morin  (ISO)
morphine  (EXP)
Morroniside  (ISO)
motexafin gadolinium  (ISO)
myricetin  (ISO)
N(4)-hydroxycytidine  (EXP)
N(6)-butyryl-cAMP  (ISO)
N(omega)-methyl-L-arginine  (ISO)
N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine  (ISO)
N-[2-(4-bromocinnamylamino)ethyl]isoquinoline-5-sulfonamide  (EXP)
N-acetyl-L-cysteine  (EXP,ISO)
N-acetylsphingosine  (EXP)
N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal  (ISO)
N-butyl-N-(4-hydroxybutyl)nitrosamine  (ISO)
N-ethyl-5'-carboxamidoadenosine  (EXP)
N-formyl-L-methionyl-L-leucyl-L-phenylalanine  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
N-methyl-N-nitrosourea  (EXP,ISO)
N-nitrosodiethylamine  (EXP,ISO)
N-nitrosodimethylamine  (ISO)
N-nitrosomorpholine  (ISO)
N1'-[2-[[5-[(dimethylamino)methyl]-2-furanyl]methylthio]ethyl]-N1-methyl-2-nitroethene-1,1-diamine  (ISO)
naproxen  (ISO)
Neferine  (ISO)
neocuproine  (EXP)
nevirapine  (ISO)
nickel atom  (ISO)
nickel dichloride  (ISO)
nickel sulfate  (ISO)
niclosamide  (ISO)
nicotine  (EXP,ISO)
nicotinic acid  (EXP,ISO)
nifedipine  (EXP,ISO)
nimesulide  (EXP,ISO)
nitric oxide  (ISO)
nitrofen  (ISO)
nitroprusside  (ISO)
nocodazole  (ISO)
Nonidet P-40  (ISO)
Nonylphenol  (ISO)
NORCANTHARIDIN  (ISO)
norethisterone  (ISO)
norwogonin  (ISO)
NS-398  (ISO)
ochratoxin A  (EXP,ISO)
octreotide  (ISO)
okadaic acid  (EXP,ISO)
organoselenium compound  (ISO)
oxaliplatin  (ISO)
oxilofrine  (ISO)
oxytetracycline  (ISO)
ozone  (EXP,ISO)
p-chloromercuribenzoic acid  (ISO)
p-menthan-3-ol  (ISO)
p-tert-Amylphenol  (ISO)
paclitaxel  (EXP,ISO)
palmatine  (ISO)
palytoxin  (EXP)
paracetamol  (EXP,ISO)
paraoxon  (EXP)
paraquat  (EXP,ISO)
parathion  (ISO)
paroxetine  (EXP)
parthenolide  (ISO)
patulin  (ISO)
PD123319  (ISO)
PD173074  (ISO)
pentetrazol  (EXP)
Pentoxifylline  (ISO)
perfluorodecanoic acid  (ISO)
perfluorononanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (EXP,ISO)
perfluorooctanoic acid  (EXP,ISO)
perfluoroundecanoic acid  (ISO)
perindopril  (EXP)
phenethyl caffeate  (EXP)
phenobarbital  (EXP,ISO)
phenols  (ISO)
phenylephrine  (ISO)
phenylhydrazine  (ISO)
phloretin  (EXP,ISO)
phlorizin  (EXP)
phorbol 13-acetate 12-myristate  (EXP,ISO)
phosgene  (EXP,ISO)
Phytolaccoside E  (ISO)
pinostrobin  (ISO)
pioglitazone  (ISO)
piperonyl butoxide  (ISO)
pirinixic acid  (EXP,ISO)
piroxicam  (ISO)
plerixafor  (EXP,ISO)
plumbagin  (ISO)
poly(vinylpyrrolidone)  (EXP)
polymyxin B2  (ISO)
ponatinib  (EXP)
Ponicidin  (ISO)
potassium bromate  (ISO)
potassium chromate  (ISO)
potassium dichromate  (EXP,ISO)
potassium nitrate  (ISO)
prednisolone  (ISO)
prednisone  (ISO)
procyanidin B2  (ISO)
progesterone  (EXP,ISO)
propidium  (ISO)
propionic acid  (EXP)
propranolol  (EXP,ISO)
Proscillaridin  (ISO)
prostaglandin E2  (ISO)
prostaglandin F2alpha  (ISO)
protein kinase inhibitor  (ISO)
puerarin  (ISO)
puromycin  (ISO)
pyrvinium  (ISO)
quartz  (ISO)
quercetin  (EXP,ISO)
quinolone  (ISO)
quinomethionate  (ISO)
Quinomycin A  (ISO)
rac-lactic acid  (ISO)
raloxifene  (ISO)
ranitidine  (ISO)
reactive oxygen species  (ISO)
Rebamipide  (ISO)
regorafenib  (ISO)
resveratrol  (EXP,ISO)
Rhein  (ISO)
ribavirin  (EXP,ISO)
rifampicin  (ISO)
Riluzole  (ISO)
rimonabant  (EXP)
Ro 31-8220  (ISO)
romidepsin  (ISO)
rotenone  (EXP,ISO)
rottlerin  (ISO)
roxarsone  (ISO)
royal jelly  (ISO)
ruthenium atom  (ISO)
ruthenium red  (ISO)
rutin  (ISO)
ruxolitinib  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
S-butyl-DL-homocysteine (S,R)-sulfoximine  (ISO)
S-nitroso-N-acetyl-D-penicillamine  (ISO)
saccharin  (EXP)
salsalate  (ISO)
salubrinal  (ISO)
SB 203580  (EXP,ISO)
SB 431542  (ISO)
SCH 23390  (ISO)
scutellarin  (ISO)
shikimic acid  (EXP)
sildenafil citrate  (ISO)
silibinin  (EXP,ISO)
silicon dioxide  (EXP,ISO)
silver atom  (ISO)
silver(0)  (ISO)
simazine  (EXP)
simvastatin  (EXP,ISO)
sirolimus  (EXP,ISO)
sirtinol  (ISO)
sodium arsenate  (EXP)
sodium arsenite  (EXP,ISO)
sodium chloride  (ISO)
sodium dodecyl sulfate  (ISO)
sodium nitrite  (ISO)
sorafenib  (EXP)
sorbinil  (EXP)
spironolactone  (ISO)
squalene  (ISO)
SR 144528  (EXP)
staurosporine  (ISO)
streptozocin  (EXP,ISO)
succimer  (EXP)
sulfadimethoxine  (EXP,ISO)
sulforaphane  (ISO)
sumatriptan  (ISO)
sunitinib  (EXP,ISO)
T-2 toxin  (EXP)
tacrolimus hydrate  (ISO)
tadalafil  (ISO)
tamibarotene  (ISO)
tamoxifen  (EXP,ISO)
Tanshinone I  (EXP)
taurine  (ISO)
tauroursodeoxycholic acid  (ISO)
tebufenpyrad  (ISO)
telmisartan  (EXP,ISO)
temozolomide  (ISO)
Temsirolimus  (ISO)
Terpestacin  (ISO)
tert-butyl hydroperoxide  (ISO)
testosterone  (EXP,ISO)
Tetrachlorobisphenol A  (ISO)
tetrachloromethane  (EXP,ISO)
tetraethylenepentamine  (ISO)
tetramethylpyrazine  (EXP)
tetrathiomolybdate(2-)  (ISO)
thalidomide  (EXP,ISO)
thapsigargin  (ISO)
thiabendazole  (ISO)
thifluzamide  (ISO)
thimerosal  (ISO)
thioacetamide  (EXP,ISO)
thymol  (EXP)
thymol sulfate(1-)  (EXP)
thymoquinone  (EXP)
thyroxine  (ISO)
ticlopidine  (ISO)
tin(II) chloride (anhydrous)  (EXP)
titanium dioxide  (EXP,ISO)
tofacitinib  (ISO)
toluene 2,4-diisocyanate  (EXP,ISO)
topotecan  (ISO)
trans-caffeic acid  (EXP)
tremolite asbestos  (ISO)
triamcinolone  (ISO)
triamcinolone acetonide  (ISO)
Tributyltin oxide  (ISO)
trichloroethene  (ISO)
triclosan  (ISO)
trimellitic anhydride  (EXP)
triptonide  (EXP)
troglitazone  (EXP,ISO)
trovafloxacin  (EXP)
tunicamycin  (ISO)
tyloxapol  (EXP)
tyrphostin AG 1478  (ISO)
urethane  (EXP,ISO)
ursolic acid  (EXP)
vadimezan  (ISO)
valdecoxib  (ISO)
valproic acid  (EXP,ISO)
valsartan  (EXP,ISO)
vancomycin  (EXP)
Verbenalin  (ISO)
vincaleukoblastine  (ISO)
vinclozolin  (ISO)
vincristine  (ISO)
vitamin D  (EXP)
vitamin E  (EXP,ISO)
vorinostat  (ISO)
VX nerve agent  (ISO)
VX-745  (ISO)
warfarin  (ISO)
WIN 55212-2  (EXP,ISO)
withaferin A  (ISO)
wortmannin  (ISO)
zearalenone  (EXP,ISO)
zerumbone  (ISO)
zinc acetate  (ISO)
zinc atom  (ISO)
zinc dichloride  (EXP,ISO)
zinc sulfate  (ISO)
zinc(0)  (ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
angiogenesis  (IDA,IGI,IMP,ISO)
angiogenesis involved in coronary vascular morphogenesis  (ISO)
apoptotic process  (IMP)
artery morphogenesis  (IMP)
basophil chemotaxis  (ISO)
blood vessel development  (IMP)
blood vessel morphogenesis  (IDA,IGI,IMP)
blood vessel remodeling  (ISO)
bone trabecula formation  (IMP)
bone trabecula morphogenesis  (IMP)
branching involved in blood vessel morphogenesis  (IMP,ISO)
branching morphogenesis of an epithelial tube  (IDA)
camera-type eye morphogenesis  (IMP)
cardiac muscle cell development  (IMP)
cardiac vascular smooth muscle cell development  (IMP)
cell chemotaxis  (ISO)
cell differentiation  (IEA)
cell migration  (IDA,IGI)
cell migration involved in sprouting angiogenesis  (ISO)
cell population proliferation  (IMP)
cell-cell adhesion  (IGI)
cellular response to dexamethasone stimulus  (ISO)
cellular response to estrogen stimulus  (ISO)
cellular response to fibroblast growth factor stimulus  (ISO)
cellular response to hypoxia  (ISO)
cellular response to mechanical stimulus  (ISO)
cellular response to vascular endothelial growth factor stimulus  (IGI,ISO)
cellular response to wortmannin  (ISO)
cellular response to xenobiotic stimulus  (ISO)
cellular stress response to acid chemical  (ISO)
commissural neuron axon guidance  (IDA,IMP)
coronary artery morphogenesis  (IMP)
coronary vein morphogenesis  (IMP)
dopaminergic neuron differentiation  (IGI)
endothelial cell chemotaxis  (ISO)
endothelial cell migration  (IMP)
endothelial cell proliferation  (IDA)
epithelial cell differentiation  (IMP)
epithelial cell maturation  (IMP)
epithelial cell proliferation  (IMP)
eye photoreceptor cell development  (IMP)
female pregnancy  (ISO)
heart morphogenesis  (IMP)
homeostasis of number of cells within a tissue  (IMP)
in utero embryonic development  (IMP)
induction of positive chemotaxis  (IBA,ISO)
kidney development  (IMP)
lactation  (IMP)
lung alveolus development  (ISO)
lung development  (IDA,IMP)
lung vasculature development  (IDA,IMP)
lymph vessel morphogenesis  (IMP)
lymphangiogenesis  (IDA,IGI)
macrophage differentiation  (ISO)
mammary gland alveolus development  (IMP)
mesenchymal cell proliferation  (IDA)
mesoderm development  (IMP)
monocyte differentiation  (ISO)
motor neuron migration  (IMP)
mRNA stabilization  (ISO)
negative regulation of adherens junction organization  (ISO)
negative regulation of apoptotic process  (IMP,ISO)
negative regulation of blood-brain barrier permeability  (ISO)
negative regulation of bone resorption  (ISO)
negative regulation of cell-cell adhesion  (IGI)
negative regulation of cell-cell adhesion mediated by cadherin  (ISO)
negative regulation of epithelial to mesenchymal transition  (IMP)
negative regulation of establishment of endothelial barrier  (ISO)
negative regulation of extrinsic apoptotic signaling pathway  (IDA)
negative regulation of fat cell differentiation  (IMP)
negative regulation of gene expression  (IMP,ISO)
negative regulation of neuron apoptotic process  (IDA)
negative regulation of programmed cell death  (ISO)
negative regulation of transcription by RNA polymerase II  (ISO)
nervous system development  (ISO)
neuroblast proliferation  (IGI)
neuron apoptotic process  (ISO)
neuron development  (IMP)
outflow tract morphogenesis  (IMP)
ovarian follicle development  (IMP)
positive chemotaxis  (IDA,ISO)
positive regulation of angiogenesis  (IBA,IDA,ISO)
positive regulation of axon extension involved in axon guidance  (IDA,IMP)
positive regulation of blood vessel endothelial cell migration  (ISO)
positive regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis  (ISO)
positive regulation of branching involved in ureteric bud morphogenesis  (IDA)
positive regulation of cell adhesion  (ISO)
positive regulation of cell division  (IEA)
positive regulation of cell migration  (ISO)
positive regulation of cell migration involved in sprouting angiogenesis  (ISO)
positive regulation of cell population proliferation  (IDA,ISO)
positive regulation of cell proliferation by VEGF-activated platelet derived growth factor receptor signaling pathway  (ISO)
positive regulation of cold-induced thermogenesis  (IMP)
positive regulation of DNA biosynthetic process  (ISO)
positive regulation of endothelial cell chemotaxis  (ISO)
positive regulation of endothelial cell chemotaxis by VEGF-activated vascular endothelial growth factor receptor signaling pathway  (ISO)
positive regulation of endothelial cell migration  (ISO)
positive regulation of endothelial cell proliferation  (IBA,IDA,ISO)
positive regulation of epithelial cell proliferation  (IMP)
positive regulation of epithelial tube formation  (ISO)
positive regulation of ERK1 and ERK2 cascade  (IDA,ISO)
positive regulation of focal adhesion assembly  (ISO)
positive regulation of gene expression  (ISO)
positive regulation of lymphangiogenesis  (IDA)
positive regulation of MAPK cascade  (ISO)
positive regulation of mast cell chemotaxis  (IBA,ISO)
positive regulation of mesenchymal cell proliferation  (IDA)
positive regulation of neuroblast proliferation  (IGI)
positive regulation of osteoblast differentiation  (IMP)
positive regulation of p38MAPK cascade  (ISO)
positive regulation of peptidyl-tyrosine phosphorylation  (IDA,ISO)
positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction  (IDA,ISO)
positive regulation of positive chemotaxis  (ISO)
positive regulation of protein autophosphorylation  (ISO)
positive regulation of protein kinase C signaling  (ISO)
positive regulation of protein localization to early endosome  (ISO)
positive regulation of protein phosphorylation  (IBA,ISO)
positive regulation of protein-containing complex assembly  (ISO)
positive regulation of receptor internalization  (ISO)
positive regulation of receptor signaling pathway via STAT  (ISO)
positive regulation of signal transduction  (ISO)
positive regulation of smooth muscle cell proliferation  (ISO)
positive regulation of sprouting angiogenesis  (ISO)
positive regulation of stem cell proliferation  (IDA)
positive regulation of transcription by RNA polymerase II  (ISO)
positive regulation of trophoblast cell migration  (ISO)
positive regulation of vascular endothelial growth factor signaling pathway  (ISO)
positive regulation of vascular permeability  (IDA,ISO)
post-embryonic camera-type eye development  (IMP)
primitive erythrocyte differentiation  (IMP)
regulation of cell shape  (ISO)
regulation of endothelial cell differentiation  (IDA)
regulation of growth  (IMP)
regulation of hematopoietic progenitor cell differentiation  (IDA)
regulation of nitric oxide mediated signal transduction  (ISO)
regulation of transcription by RNA polymerase II  (ISO)
response to dexamethasone  (ISO)
response to estradiol  (ISO)
response to folic acid  (ISO)
response to hypoxia  (IBA,ISO)
response to oxygen levels  (ISO)
response to progesterone  (ISO)
response to vitamin A  (ISO)
retinal ganglion cell axon guidance  (IDA,IMP)
sprouting angiogenesis  (IBA,IDA)
stem cell proliferation  (IDA)
surfactant homeostasis  (IMP)
T-helper 1 type immune response  (ISO)
tissue remodeling  (ISO)
tube formation  (ISO)
vascular endothelial growth factor receptor signaling pathway  (IBA,IDA,ISO)
vascular endothelial growth factor receptor-2 signaling pathway  (ISO)
vascular endothelial growth factor signaling pathway  (IBA,ISO)
vascular wound healing  (ISO)
vasculature development  (IMP)
vasodilation  (IDA)
VEGF-activated neuropilin signaling pathway  (IDA,IMP,ISO)

Cellular Component

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal angiogenesis  (IAGP)
abnormal arteriole morphology  (IAGP)
abnormal artery morphology  (IAGP)
abnormal axon morphology  (IAGP)
abnormal blood circulation  (IAGP)
abnormal blood vessel morphology  (IAGP)
abnormal brain vasculature morphology  (IAGP)
abnormal capillary morphology  (IAGP)
abnormal cardiac muscle relaxation  (IAGP)
abnormal cardiovascular system physiology  (IAGP)
abnormal carotid artery morphology  (IAGP)
abnormal cerebral cortex morphology  (IAGP)
abnormal choroid plexus morphology  (IAGP)
abnormal coronal suture morphology  (IAGP)
abnormal coronary artery morphology  (IAGP)
abnormal coronary vein morphology  (IAGP)
abnormal coronary vessel morphology  (IAGP)
abnormal cranial nerve morphology  (IAGP)
abnormal craniofacial morphology  (IAGP)
abnormal dorsal aorta morphology  (IAGP)
abnormal facial motor nucleus morphology  (IAGP)
abnormal forebrain development  (IAGP)
abnormal forelimb bud morphology  (IAGP)
abnormal fourth pharyngeal arch artery morphology  (IAGP)
abnormal gait  (IAGP)
abnormal glomerular capillary endothelium morphology  (IAGP)
abnormal glomerular capillary morphology  (IAGP)
abnormal glomerular filtration barrier morphology  (IAGP)
abnormal grip strength  (IAGP)
abnormal grooming behavior  (IAGP)
abnormal heart morphology  (IAGP)
abnormal heart septum morphology  (IAGP)
abnormal impulse conducting system conduction  (IAGP)
abnormal induced morbidity/mortality  (IAGP)
abnormal interventricular septum morphology  (IAGP)
abnormal intramembranous bone ossification  (IAGP)
abnormal kidney afferent arteriole morphology  (IAGP)
abnormal kidney arterial blood vessel morphology  (IAGP)
abnormal kidney efferent arteriole morphology  (IAGP)
abnormal kidney interlobular artery morphology  (IAGP)
abnormal kidney morphology  (IAGP)
abnormal kidney vasculature morphology  (IAGP)
abnormal liver development  (IAGP)
abnormal loop of Henle morphology  (IAGP)
abnormal lung compliance  (IAGP)
abnormal lung development  (IAGP)
abnormal lung epithelium morphology  (IAGP)
abnormal lung morphology  (IAGP)
abnormal lung saccule morphology  (IAGP)
abnormal lung vasculature morphology  (IAGP)
abnormal lymphatic vessel morphology  (IAGP)
abnormal mandible morphology  (IAGP)
abnormal maxilla morphology  (IAGP)
abnormal mesangial cell morphology  (IAGP)
abnormal motor capabilities/coordination/movement  (IAGP)
abnormal muscle physiology  (IAGP)
abnormal myocardial fiber morphology  (IAGP)
abnormal myocardial trabeculae morphology  (IAGP)
abnormal nephrogenic zone morphology  (IAGP)
abnormal neuron physiology  (IAGP)
abnormal neuron proliferation  (IAGP)
abnormal neuronal migration  (IAGP)
abnormal palatal mesenchymal cell proliferation  (IAGP)
abnormal palatal shelf bone ossification  (IAGP)
abnormal palatal shelf elevation  (IAGP)
abnormal pericyte morphology  (IAGP)
abnormal peritubular capillary morphology  (IAGP)
abnormal pharyngeal arch artery morphology  (IAGP)
abnormal pharyngeal arch morphology  (IAGP)
abnormal phrenic nerve morphology  (IAGP)
abnormal placenta vasculature  (IAGP)
abnormal podocyte morphology  (IAGP)
abnormal podocyte slit diaphragm morphology  (IAGP)
abnormal proximal convoluted tubule morphology  (IAGP)
abnormal pulmonary acinus morphology  (IAGP)
abnormal pulmonary circulation  (IAGP)
abnormal renal glomerulus basement membrane morphology  (IAGP)
abnormal renal glomerulus basement membrane thickness  (IAGP)
abnormal renal glomerulus morphology  (IAGP)
abnormal respiratory system physiology  (IAGP)
abnormal retina morphology  (IAGP)
abnormal retina outer nuclear layer morphology  (IAGP)
abnormal retina outer plexiform layer morphology  (IAGP)
abnormal retina vasculature morphology  (IAGP)
abnormal sarcomere morphology  (IAGP)
abnormal sciatic nerve morphology  (IAGP)
abnormal secondary palate development  (IAGP)
abnormal sexual interaction  (IAGP)
abnormal sixth pharyngeal arch artery morphology  (IAGP)
abnormal somatic nervous system morphology  (IAGP)
abnormal spinal cord ventral horn morphology  (IAGP)
abnormal ST segment  (IAGP)
abnormal T wave  (IAGP)
abnormal third pharyngeal arch artery morphology  (IAGP)
abnormal thymus morphology  (IAGP)
abnormal truncus arteriosus septation  (IAGP)
abnormal vascular branching morphogenesis  (IAGP)
abnormal vascular development  (IAGP)
abnormal vascular endothelial cell differentiation  (IAGP)
abnormal vascular regression  (IAGP)
abnormal venule morphology  (IAGP)
abnormal visceral yolk sac blood island morphology  (IAGP)
abnormal vitelline vasculature morphology  (IAGP)
abnormal vitelline vein morphology  (IAGP)
abnormal wound healing  (IAGP)
absent gastric milk in neonates  (IAGP)
absent glomerular endothelium fenestra  (IAGP)
absent incisors  (IAGP)
absent parathyroid glands  (IAGP)
albuminuria  (IAGP)
anemia  (IAGP)
aorta pulmonary collateral arteries  (IAGP)
astrocytosis  (IAGP)
atelectasis  (IAGP)
athymia  (IAGP)
axon degeneration  (IAGP)
cardiac ischemia  (IAGP)
cervical aortic arch  (IAGP)
cleft palate  (IAGP)
coarse hair  (IAGP)
cortical renal glomerulopathies  (IAGP)
cyanosis  (IAGP)
decreased angiogenesis  (IAGP)
decreased body size  (IAGP)
decreased body weight  (IAGP)
decreased brain size  (IAGP)
decreased capillary density  (IAGP)
decreased cardiac muscle contractility  (IAGP)
decreased glomerular capillary number  (IAGP)
decreased heart rate  (IAGP)
decreased inflammatory response  (IAGP)
decreased left ventricle systolic pressure  (IAGP)
decreased litter size  (IAGP)
decreased locomotor activity  (IAGP)
decreased lymphocyte cell number  (IAGP)
decreased mesenchymal cell proliferation involved in lung development  (IAGP)
decreased metastatic potential  (IAGP)
decreased neuron number  (IAGP)
decreased palatal shelf size  (IAGP)
decreased pulmonary endothelial cell surface  (IAGP)
decreased renal glomerular filtration rate  (IAGP)
decreased renal glomerulus number  (IAGP)
decreased skin turgor  (IAGP)
decreased survivor rate  (IAGP)
decreased vascular endothelial cell number  (IAGP)
dehydration  (IAGP)
delayed heart development  (IAGP)
dilated capillary  (IAGP)
dilated proximal convoluted tubule  (IAGP)
dilated renal tubule  (IAGP)
double aortic arch  (IAGP)
ectopic thymus  (IAGP)
edema  (IAGP)
embryonic lethality between somite formation and embryo turning, complete penetrance  (IAGP)
embryonic lethality during organogenesis, complete penetrance  (IAGP)
embryonic lethality during organogenesis, incomplete penetrance  (IAGP)
emphysema  (IAGP)
enlarged heart  (IAGP)
enlarged lateral ventricles  (IAGP)
expanded mesangial matrix  (IAGP)
extramedullary hematopoiesis  (IAGP)
female infertility  (IAGP)
glomerulosclerosis  (IAGP)
heart hemorrhage  (IAGP)
hemorrhage  (IAGP)
hindlimb paralysis  (IAGP)
hydrocephaly  (IAGP)
hypoxia  (IAGP)
impaired coordination  (IAGP)
impaired righting response  (IAGP)
increased blood urea nitrogen level  (IAGP)
increased capillary tortuosity  (IAGP)
increased circulating creatinine level  (IAGP)
increased embryonic neuroepithelium apoptosis  (IAGP)
increased embryonic tissue cell apoptosis  (IAGP)
increased myocardial fiber size  (IAGP)
increased neuron apoptosis  (IAGP)
increased renal glomerulus basement membrane thickness  (IAGP)
increased urine protein level  (IAGP)
interrupted aortic arch, type b  (IAGP)
irregular heartbeat  (IAGP)
kidney atrophy  (IAGP)
kidney failure  (IAGP)
lethality throughout fetal growth and development, complete penetrance  (IAGP)
lethargy  (IAGP)
limb grasping  (IAGP)
lung inflammation  (IAGP)
motor neuron degeneration  (IAGP)
muscle weakness  (IAGP)
myocardial fiber degeneration  (IAGP)
myocardium necrosis  (IAGP)
neonatal lethality, complete penetrance  (IAGP)
neonatal lethality, incomplete penetrance  (IAGP)
neurodegeneration  (IAGP)
neuron degeneration  (IAGP)
no abnormal phenotype detected  (IAGP)
overriding aortic valve  (IAGP)
palatal shelf hypoplasia  (IAGP)
palatal shelves fail to meet at midline  (IAGP)
pale kidney  (IAGP)
pale lung  (IAGP)
pancytopenia  (IAGP)
paresis  (IAGP)
perinatal lethality, complete penetrance  (IAGP)
perinatal lethality, incomplete penetrance  (IAGP)
persistence of hyaloid vascular system  (IAGP)
persistent ductus caroticus  (IAGP)
persistent right dorsal aorta  (IAGP)
persistent truncus arteriosus  (IAGP)
pharyngeal arch hypoplasia  (IAGP)
podocyte foot process effacement  (IAGP)
poor arterial differentiation  (IAGP)
postnatal growth retardation  (IAGP)
postnatal lethality, complete penetrance  (IAGP)
postnatal lethality, incomplete penetrance  (IAGP)
premature death  (IAGP)
progressive muscle weakness  (IAGP)
prolonged QRS complex duration  (IAGP)
prolonged QT interval  (IAGP)
pulmonary edema  (IAGP)
pulmonary trunk hypoplasia  (IAGP)
reduced fertility  (IAGP)
renal cast  (IAGP)
renal glomerulus atrophy  (IAGP)
renal glomerulus hypertrophy  (IAGP)
renal ischemia  (IAGP)
respiratory distress  (IAGP)
retina degeneration  (IAGP)
retina gliosis  (IAGP)
retina hemorrhage  (IAGP)
retroesophageal right subclavian artery  (IAGP)
right aortic arch  (IAGP)
scoliosis  (IAGP)
short mandible  (IAGP)
skeletal muscle fiber atrophy  (IAGP)
slow postnatal weight gain  (IAGP)
small kidney  (IAGP)
thick pulmonary interalveolar septum  (IAGP)
thin ventricle myocardium compact layer  (IAGP)
thin ventricular wall  (IAGP)
thymus hypoplasia  (IAGP)
ventricular septal defect  (IAGP)
References

References - curated
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83. Vascular endothelial growth factor (VEGF) signaling regulates hippocampal neurons by elevation of intracellular calcium and activation of calcium/calmodulin protein kinase II and mammalian target of rapamycin. Kim BW, etal., Cell Signal. 2008 Apr;20(4):714-25. Epub 2007 Dec 17.
84. Genetic variants in the candidate genes of the apoptosis pathway and susceptibility to chronic myeloid leukemia. Kim DH, etal., Blood. 2009 Mar 12;113(11):2517-25. doi: 10.1182/blood-2008-07-169110. Epub 2009 Jan 13.
85. Vascular endothelial growth factor (VEGF) gene (VEGFA) polymorphism can predict the prognosis in acute myeloid leukaemia patients. Kim DH, etal., Br J Haematol. 2008 Jan;140(1):71-9. Epub 2007 Nov 3.
86. Vascular endothelial growth factor (VEGF) and soluble VEGF receptor FLT-1 in diabetic nephropathy. Kim NH, etal., Kidney Int. 2005 Jan;67(1):167-77.
87. Vascular endothelial growth factor antagonist reduces brain edema formation and venous infarction. Kimura R, etal., Stroke. 2005 Jun;36(6):1259-63. Epub 2005 May 5.
88. Effects of experimental type 1 diabetes and exercise training on angiogenic gene expression and capillarization in skeletal muscle. Kivela R, etal., FASEB J. 2006 Jul;20(9):1570-2.
89. 1,2-dioleoyl-3-trimethylammonium-propane (DOTAP)-formulated, immune-stimulatory vascular endothelial growth factor a small interfering RNA (siRNA) increases antitumoral efficacy in murine orthotopic hepatocellular carcinoma with liver fibrosis. Kornek M, etal., Mol Med. 2008 Jul-Aug;14(7-8):365-73. doi: 10.2119/2008-00003.Kornek.
90. [Vascular endothelial growth factor levels in the aqueous and serum in diabetic retinopathy with or without neovascular glaucoma]. Kozawa T, etal., Nippon Ganka Gakkai Zasshi. 1998 Nov;102(11):731-8.
91. Enhanced bronchial expression of vascular endothelial growth factor and receptors (Flk-1 and Flt-1) in patients with chronic obstructive pulmonary disease. Kranenburg AR, etal., Thorax. 2005 Feb;60(2):106-13.
92. Elevation of vascular endothelial growth factor-A serum levels following acute myocardial infarction. Evidence for its origin and functional significance. Kranz A, etal., J Mol Cell Cardiol. 2000 Jan;32(1):65-72.
93. Airway angiogenesis in patients with rhinitis and controlled asthma. Kristan SS, etal., Clin Exp Allergy. 2009 Mar;39(3):354-60. Epub 2009 Jan 22.
94. Targeted deletion of Vegfa in adult mice induces vision loss. Kurihara T, etal., J Clin Invest. 2012 Nov;122(11):4213-7. doi: 10.1172/JCI65157. Epub 2012 Oct 24.
95. Reductions in circulating levels of IL-16, IL-7 and VEGF-A in myalgic encephalomyelitis/chronic fatigue syndrome. Landi A, etal., Cytokine. 2016 Feb;78:27-36. doi: 10.1016/j.cyto.2015.11.018. Epub 2015 Nov 28.
96. Vascular endothelial growth factor and hepatocyte growth factor levels are differentially elevated in patients with advanced retinopathy of prematurity. Lashkari K, etal., Am J Pathol. 2000 Apr;156(4):1337-44.
97. Modafinil improves monocrotaline-induced pulmonary hypertension rat model. Lee H, etal., Pediatr Res. 2016 Jul;80(1):119-27. doi: 10.1038/pr.2016.38. Epub 2016 Mar 9.
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PMID:26175493   PMID:26184908   PMID:26201683   PMID:26202810   PMID:26252542   PMID:26269515   PMID:26269531   PMID:26276819   PMID:26305217   PMID:26317647   PMID:26395479   PMID:26396267  
PMID:26416452   PMID:26427397   PMID:26432869   PMID:26446156   PMID:26463974   PMID:26465082   PMID:26502369   PMID:26503042   PMID:26503641   PMID:26539488   PMID:26542520   PMID:26553657  
PMID:26566904   PMID:26598222   PMID:26603154   PMID:26625311   PMID:26646502   PMID:26657770   PMID:26659946   PMID:26671074   PMID:26671547   PMID:26683794   PMID:26708340   PMID:26727223  
PMID:26731472   PMID:26733387   PMID:26744331   PMID:26757978   PMID:26764350   PMID:26777415   PMID:26780953   PMID:26781283   PMID:26808210   PMID:26811378   PMID:26818087   PMID:26819373  
PMID:26825658   PMID:26828021   PMID:26837315   PMID:26856890   PMID:26863115   PMID:26877262   PMID:26899202   PMID:26912740   PMID:26922678   PMID:26923802   PMID:26948326   PMID:26950855  
PMID:26951383   PMID:26966180   PMID:26968737   PMID:26974308   PMID:26978773   PMID:26978795   PMID:26980697   PMID:26984772   PMID:27019112   PMID:27033458   PMID:27035511   PMID:27048738  
PMID:27068110   PMID:27074663   PMID:27079440   PMID:27112838   PMID:27126736   PMID:27130666   PMID:27133169   PMID:27133203   PMID:27148685   PMID:27167350   PMID:27214556   PMID:27225953  
PMID:27243144   PMID:27269204   PMID:27270835   PMID:27306493   PMID:27325674   PMID:27325890   PMID:27349759   PMID:27350436   PMID:27372644   PMID:27381866   PMID:27383629   PMID:27390161  
PMID:27423695   PMID:27445154   PMID:27456002   PMID:27473515   PMID:27474074   PMID:27482546   PMID:27482904   PMID:27489284   PMID:27490344   PMID:27522498   PMID:27526687   PMID:27538380  
PMID:27589684   PMID:27598902   PMID:27602496   PMID:27621061   PMID:27649680   PMID:27664421   PMID:27709112   PMID:27725190   PMID:27732581   PMID:27789228   PMID:27794491   PMID:27810956  
PMID:27811335   PMID:27829154   PMID:27849577   PMID:27870972   PMID:27872190   PMID:27905554   PMID:27918307   PMID:27927648   PMID:27930695   PMID:27930960   PMID:27965054   PMID:28079884  
PMID:28100332   PMID:28114591   PMID:28118605   PMID:28137836   PMID:28152577   PMID:28161441   PMID:28162974   PMID:28196902   PMID:28204537   PMID:28222438   PMID:28244687   PMID:28254844  
PMID:28262664   PMID:28289053   PMID:28298294   PMID:28348418   PMID:28438786   PMID:28534495   PMID:28542142   PMID:28574576   PMID:28597506   PMID:28640846   PMID:28661183   PMID:28663440  
PMID:28676569   PMID:28684544   PMID:28686658   PMID:28710834   PMID:28714968   PMID:28729362   PMID:28776225   PMID:28811219   PMID:28835631   PMID:28847650   PMID:28851877   PMID:28852052  
PMID:28867486   PMID:28924218   PMID:28940930   PMID:28944834   PMID:28948650   PMID:28966265   PMID:29026147   PMID:29038312   PMID:29039484   PMID:29074590   PMID:29080796   PMID:29086765  
PMID:29097668   PMID:29136509   PMID:29138430   PMID:29138837   PMID:29146733   PMID:29150606   PMID:29212953   PMID:29233575   PMID:29235752   PMID:29279353   PMID:29298428   PMID:29351307  
PMID:29366525   PMID:29397865   PMID:29417848   PMID:29437042   PMID:29438518   PMID:29462614   PMID:29487191   PMID:29514082   PMID:29567677   PMID:29574902   PMID:29590659   PMID:29596616  
PMID:29609731   PMID:29620150   PMID:29625473   PMID:29638228   PMID:29688375   PMID:29695634   PMID:29702127   PMID:29743679   PMID:29754163   PMID:29769445   PMID:29776963   PMID:29842876  
PMID:29901792   PMID:29911998   PMID:29925004   PMID:29975682   PMID:30014172   PMID:30071127   PMID:30075174   PMID:30084919   PMID:30103950   PMID:30120860   PMID:30126894   PMID:30128894  
PMID:30132576   PMID:30134070   PMID:30153454   PMID:30192114   PMID:30204931   PMID:30228991   PMID:30238211   PMID:30290177   PMID:30303066   PMID:30352487   PMID:30398903   PMID:30431056  
PMID:30448061   PMID:30456891   PMID:30510170   PMID:30515388   PMID:30545903   PMID:30566624   PMID:30586702   PMID:30596653   PMID:30606478   PMID:30612004   PMID:30621518   PMID:30628675  
PMID:30641926   PMID:30661230   PMID:30664207   PMID:30694693   PMID:30718289   PMID:30743056   PMID:30793306   PMID:30793310   PMID:30826058   PMID:30902983   PMID:30910640   PMID:30926233  
PMID:30936179   PMID:30973786   PMID:30974834   PMID:31081125   PMID:31091450   PMID:31100080   PMID:31107137   PMID:31202927   PMID:31241138   PMID:31258484   PMID:31266813   PMID:31272714  
PMID:31289995   PMID:31338035   PMID:31403471   PMID:31451620   PMID:31487223   PMID:31501519   PMID:31545295   PMID:31578032   PMID:31605007   PMID:31647983   PMID:31665628   PMID:31672940  
PMID:31698979   PMID:31748268   PMID:31754927   PMID:31759628   PMID:31761723   PMID:31789590   PMID:31790655   PMID:31847469   PMID:31868583   PMID:31875985   PMID:31900966   PMID:31902568  
PMID:31930683   PMID:31934626   PMID:31935212   PMID:31975545   PMID:31989253   PMID:32027977   PMID:32043657   PMID:32045685   PMID:32059772   PMID:32060653   PMID:32083964   PMID:32139674  
PMID:32141716   PMID:32243583   PMID:32307402   PMID:32332719   PMID:32347357   PMID:32369449   PMID:32369453   PMID:32413023   PMID:32423231   PMID:32437334   PMID:32439763   PMID:32467233  
PMID:32492393   PMID:32497630   PMID:32545222   PMID:32590005   PMID:32627090   PMID:32634398   PMID:32663413   PMID:32668247   PMID:32784053   PMID:32787533   PMID:32819570   PMID:32989093  
PMID:33021694   PMID:33039355   PMID:33053356   PMID:33057033   PMID:33057360   PMID:33141023   PMID:33158964   PMID:33162828   PMID:33207210   PMID:33227706   PMID:33235263   PMID:33253203  
PMID:33305736   PMID:33372189   PMID:33394314   PMID:33398131   PMID:33483469   PMID:33539996   PMID:33545088   PMID:33563616   PMID:33605986   PMID:33730615   PMID:33740009   PMID:33773996  
PMID:33830085   PMID:34010630   PMID:34037749   PMID:34047208   PMID:34107348   PMID:34148274   PMID:34248495   PMID:34285351   PMID:34299636   PMID:34303767   PMID:34319836   PMID:34321999  
PMID:34326210   PMID:34331943   PMID:34356612   PMID:34433017   PMID:34502440   PMID:34502486   PMID:34533228   PMID:34657351   PMID:34699385   PMID:34717920   PMID:34791780   PMID:34890862  
PMID:35020502   PMID:35061031   PMID:35083936   PMID:35088919   PMID:35159350   PMID:35175562   PMID:35242281   PMID:35247391   PMID:35264563   PMID:35319724   PMID:35358280   PMID:35361248  
PMID:35377412   PMID:35388142   PMID:35466825   PMID:35563626   PMID:35689447   PMID:35701534   PMID:35786324   PMID:35872107   PMID:35933488   PMID:36000457   PMID:36017799   PMID:36026468  
PMID:36121037   PMID:36172864   PMID:36220570   PMID:36227697   PMID:36239412   PMID:36240771   PMID:36314682   PMID:36403190   PMID:36418889   PMID:36435450   PMID:36465608   PMID:36527615  
PMID:36546420   PMID:36640422   PMID:36729831   PMID:36737666   PMID:36740182   PMID:36789844   PMID:36796745   PMID:36834730   PMID:36883729   PMID:36925052   PMID:36947365   PMID:36988414  
PMID:37023750   PMID:37169038   PMID:37198424   PMID:37225978   PMID:37236551   PMID:37381118   PMID:37440076   PMID:37507468   PMID:37507736   PMID:37509073   PMID:37539028   PMID:37670489  
PMID:37702066   PMID:37795611   PMID:37876558   PMID:37921969   PMID:37948457   PMID:37966260   PMID:38111957   PMID:38225684  


Genomics

Comparative Map Data
Vegfa
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391746,327,919 - 46,343,303 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1746,327,919 - 46,343,295 (-)EnsemblGRCm39 Ensembl
GRCm381746,016,993 - 46,032,377 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1746,016,993 - 46,032,369 (-)EnsemblGRCm38mm10GRCm38
MGSCv371746,153,942 - 46,169,326 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361745,480,574 - 45,495,331 (-)NCBIMGSCv36mm8
Celera1749,448,065 - 49,463,499 (-)NCBICelera
Cytogenetic Map17CNCBI
cM Map1722.79NCBI
VEGFA
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38643,770,211 - 43,786,487 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl643,770,184 - 43,786,487 (+)EnsemblGRCh38hg38GRCh38
GRCh37643,737,946 - 43,754,224 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36643,845,931 - 43,862,202 (+)NCBINCBI36Build 36hg18NCBI36
Build 34643,845,923 - 43,860,314NCBI
Celera645,289,570 - 45,305,849 (+)NCBICelera
Cytogenetic Map6p21.1NCBI
HuRef643,458,106 - 43,474,385 (+)NCBIHuRef
CHM1_1643,741,412 - 43,757,691 (+)NCBICHM1_1
T2T-CHM13v2.0643,599,724 - 43,616,002 (+)NCBIT2T-CHM13v2.0
Vegfa
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8922,452,854 - 22,468,194 (+)NCBIGRCr8
mRatBN7.2914,955,300 - 14,970,641 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl914,955,300 - 14,970,641 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx923,540,015 - 23,555,341 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0928,602,643 - 28,617,969 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0926,903,445 - 26,918,771 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0917,340,341 - 17,355,681 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl917,340,341 - 17,355,681 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0916,232,415 - 16,247,658 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4910,520,730 - 10,536,071 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1910,519,065 - 10,531,506 (+)NCBI
Celera912,701,425 - 12,716,765 (+)NCBICelera
Cytogenetic Map9q12NCBI
Vegfa
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554379,527,445 - 9,541,908 (+)NCBIChiLan1.0ChiLan1.0
VEGFA
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2558,269,186 - 58,285,503 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1654,138,950 - 54,155,259 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0643,361,053 - 43,377,366 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1644,651,855 - 44,666,353 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl644,650,365 - 44,666,353 (+)Ensemblpanpan1.1panPan2
VEGFA
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11212,209,032 - 12,224,978 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1212,208,231 - 12,224,965 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1212,235,225 - 12,250,737 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01212,693,104 - 12,708,614 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1212,691,593 - 12,708,601 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11212,217,730 - 12,233,243 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01212,305,204 - 12,320,707 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01212,398,451 - 12,413,981 (+)NCBIUU_Cfam_GSD_1.0
Vegfa
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494647,698,881 - 47,715,068 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647616,247,100 - 16,260,673 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647616,245,134 - 16,261,180 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
VEGFA
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl738,746,052 - 38,761,366 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1738,746,393 - 38,762,282 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2744,459,821 - 44,475,711 (+)NCBISscrofa10.2Sscrofa10.2susScr3
VEGFA
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11728,377,959 - 28,394,508 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604443,823,884 - 43,842,951 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Vegfa
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462475415,929,414 - 15,943,637 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Vegfa
569 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3396
Count of miRNA genes:691
Interacting mature miRNAs:882
Transcripts:ENSMUST00000024747, ENSMUST00000071648, ENSMUST00000113519, ENSMUST00000113520, ENSMUST00000133605, ENSMUST00000142321, ENSMUST00000142351, ENSMUST00000143985, ENSMUST00000146149, ENSMUST00000150327, ENSMUST00000167860
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300890Bhr3_mbronchial hyperresponsiveness 3 (mouse)Not determined17397489048866091Mouse
1300706Alan1_malloantigen response 1 (mouse)Not determined17485475246469702Mouse
1357789Kdnw3_mkidney weight 3 (mouse)Not determined17485475247885665Mouse
4141272Tfv1_mtotal food volume 1 (mouse)Not determined485475265637357Mouse
1301338Lmr1_mleishmaniasis resistance 1 (mouse)Not determined171008134086996400Mouse
4142150Stheal11_msoft tissue heal 11 (mouse)Not determined171228621183361768Mouse
12904946Tammq8_mtibialis anterior muscle mass QTL 8 (mouse)171245178746451787Mouse
13524847Asrq8a_macoustic startle response 8a (mouse)171264696146646961Mouse
11081168Tir7_mtrypanosome infection response 7 (mouse)171412337248123496Mouse
1300995Fembrs4_mfemur breaking strength 4 (mouse)Not determined171506165249061760Mouse
1300914Pcir4_mperiosteal circumference 4 (mouse)Not determined171506165249061760Mouse
1302070Tbbmd7_mtotal body bone mineral density 7 (mouse)Not determined171506165249061760Mouse
1558886Lgth9_mbody length 9 (mouse)Not determined171506165249061760Mouse
1302140Wta4_mweight adult 4 (mouse)Not determined171681972150819843Mouse
1302152Skull25_mskull morphology 25 (mouse)Not determined171681972150819843Mouse
10412083Sm2_msusceptibility to Schistosoma mansoni infection 2 (mouse)Not determined171702994351030078Mouse
13452396Leusq3_mleucocytosis susceptibility QTL 3 (mouse)171746220851462345Mouse
13452399Leusq6_mleucocytosis susceptibility QTL 6 (mouse)171746220851462345Mouse
10412214Sxbq3_mSGC/Knj cross B6 QTL 3 (mouse)Not determined171746220851462345Mouse
1300535Char3_mP. chabaudi malaria resistance QTL 3 (mouse)Not determined171746220851462345Mouse
1301840Ssial4_msusceptibility to sialadenitiss 4 (mouse)Not determined171817541252178214Mouse
1301331Lbw1_mlupus NZB x NZW 1 (mouse)Not determined171841835752420983Mouse
1301056Pas2_mpulmonary adenoma susceptibility 2 (mouse)Not determined171842214152424327Mouse
15039354Nmrs36_mNAFLD-associated magnetic resonance shift 36 (mouse)171914502553145025Mouse
1301454Eae5_msusceptibility to experimental allergic encephalomyelitis 5 (mouse)Not determined172461275058612864Mouse
10412198Sst5_msusceptibility to tuberculosis 5 (mouse)Not determined172507658355712970Mouse
10412204Bbaa29_mB.burgdorferi-associated arthritis 29 (mouse)Not determined172605118560051352Mouse
1558758Kcal2_mkilocalorie 2 (mouse)Not determined172640101252911704Mouse
1302005Loco2_mlocomotor activity 2 (mouse)Not determined172688497260885114Mouse
15039348Nmrs37_mNAFLD-associated magnetic resonance shift 37 (mouse)172781520961815209Mouse
1300703Uvbi2_mUVB induced immunosuppression 2 (mouse)Not determined172862240662622654Mouse
1300589Myaa2_mmodifier of Yaa 2 (mouse)Not determined173013255564132666Mouse
4141357Mrdq1_mmodifier of retinal degeneration QTL 1 (mouse)Not determined3098790348039703Mouse
4140955Plgr1_mplague resistance locus 1 (mouse)Not determined3103350065033630Mouse
26884379Skwq5_mskull length QTL 5, 5 week (mouse)173311897454107028Mouse
1300885Mbis4_mMycobacterium bovis-induced systemic lupus erythematosus 4 (mouse)Not determined173517581770165926Mouse
10755514Amzn2_manatomical modifier of Zfp423 2 (mouse)173596629469966424Mouse
12904951Smmq2_msoleus muscle mass QTL 2 (mouse)173678974370789743Mouse
1300592Pcyts5_mplasmacytoma susceptibility 5 (mouse)Not determined173871288772712970Mouse
10755525Lymph2_mlymphocyte differential 2 (mouse)173880562672805626Mouse
10755534Lymph4_mlymphocyte differential 4 (mouse)173880562672805626Mouse
4141319Hmtb8_mhemostasis and thrombosis rebleeding time 8 (mouse)Not determined4053444774534623Mouse
15039324Nmrs48_mNAFLD-associated magnetic resonance shift 48 (mouse)174093918774939187Mouse
4141478Hbnr7_mHeligmosomoides bakeri nematode resistance 7 (mouse)Not determined4305118551739122Mouse
25394539Skmw85_mskeletal muscle weight 85, gastroc (mouse)174370766846831957Mouse
26884386Skwq13_mskull length QTL 13, 16 week (mouse)174371089153107028Mouse
26884390Skwq9_mskull length QTL 9, 10 week (mouse)174371089167806995Mouse
12903997Cfq4_mconditioned fear QTL 4 (mouse)174501655249366402Mouse

Markers in Region
Vegfa  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X164,402,260 - 164,402,327UniSTSGRCm38
MGSCv37X160,840,192 - 160,840,259UniSTSGRCm37
CeleraX147,617,654 - 147,617,721UniSTS
Cytogenetic Map17CUniSTS
Cytogenetic MapXF5UniSTS
cM Map1724.2UniSTS
cM MapX70.0UniSTS
Vegf  
Mouse AssemblyChrPosition (strand)SourceJBrowse
MGSCv371746,155,239 - 46,155,533UniSTSGRCm37
Celera1749,449,362 - 49,449,656UniSTS
Cytogenetic Map17CUniSTS
cM Map1724.2UniSTS
PMC20712P1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381746,032,365 - 46,033,320UniSTSGRCm38
MGSCv371746,169,314 - 46,170,269UniSTSGRCm37
Celera1749,463,487 - 49,464,444UniSTS
Cytogenetic Map17CUniSTS
cM Map1724.2UniSTS
PMC20712P2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381746,032,365 - 46,033,281UniSTSGRCm38
MGSCv371746,169,314 - 46,170,230UniSTSGRCm37
Celera1749,463,487 - 49,464,405UniSTS
Cytogenetic Map17CUniSTS
cM Map1724.2UniSTS
PMC262691P3  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381746,017,793 - 46,017,964UniSTSGRCm38
MGSCv371746,154,742 - 46,154,913UniSTSGRCm37
Celera1749,448,865 - 49,449,036UniSTS
Cytogenetic Map17CUniSTS
cM Map1724.2UniSTS
D2Wox60  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381746,018,384 - 46,018,564UniSTSGRCm38
MGSCv371746,155,333 - 46,155,513UniSTSGRCm37
Celera1749,449,456 - 49,449,636UniSTS
Cytogenetic Map17CUniSTS
cM Map1724.2UniSTS
VEGF_1127  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381746,017,627 - 46,018,437UniSTSGRCm38
MGSCv371746,154,576 - 46,155,386UniSTSGRCm37
Celera1749,448,699 - 49,449,509UniSTS
Cytogenetic Map17CUniSTS
cM Map1724.2UniSTS
Vegfa  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map17CUniSTS
Vegfa  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map17CUniSTS
Vegfa  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map17CUniSTS
Vegfa  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map17CUniSTS
Vegfa  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map17CUniSTS
Vegfa  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map17CUniSTS
Vegfa  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map17CUniSTS
Vegfa  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map17CUniSTS
Vegfa  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381746,025,383 - 46,025,449UniSTSGRCm38
MGSCv371746,162,332 - 46,162,398UniSTSGRCm37
Celera1749,456,455 - 49,456,521UniSTS
Cytogenetic Map17CUniSTS
Vegf  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map17CUniSTS
cM Map1724.2UniSTS
Vegf  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map17CUniSTS
cM Map1724.2UniSTS
Vegfa  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map17CUniSTS
Vegfa  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map17CUniSTS
Vegf  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map17CUniSTS
cM Map1724.2UniSTS
Vegf  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map17CUniSTS
cM Map1724.2UniSTS
Vegf  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381746,018,290 - 46,018,584UniSTSGRCm38
MGSCv371746,155,239 - 46,155,533UniSTSGRCm37
Celera1749,449,362 - 49,449,656UniSTS
Cytogenetic Map17CUniSTS
cM Map1724.2UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001025250 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001025257 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001110266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001110267 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001110268 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001287056 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001287057 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001287058 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001317041 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_009505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB086118 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC127690 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF317892 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK031905 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK131850 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AW913188 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY120866 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY263146 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY707864 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY750956 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY750957 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY756068 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC022642 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC061468 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ554097 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ832724 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU920197 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY001490 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CA321456 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466559 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CK626177 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF028705 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ712122 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M95200 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  S37052 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  S38083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  S38100 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U41383 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U50279 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000024747   ⟹   ENSMUSP00000024747
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1746,327,919 - 46,342,741 (-)Ensembl
GRCm38.p6 Ensembl1746,016,993 - 46,031,815 (-)Ensembl
RefSeq Acc Id: ENSMUST00000071648   ⟹   ENSMUSP00000071575
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1746,327,919 - 46,343,295 (-)Ensembl
GRCm38.p6 Ensembl1746,016,993 - 46,032,369 (-)Ensembl
RefSeq Acc Id: ENSMUST00000113519   ⟹   ENSMUSP00000109147
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1746,329,784 - 46,342,282 (-)Ensembl
GRCm38.p6 Ensembl1746,018,858 - 46,031,356 (-)Ensembl
RefSeq Acc Id: ENSMUST00000113520   ⟹   ENSMUSP00000109148
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1746,329,757 - 46,342,282 (-)Ensembl
GRCm38.p6 Ensembl1746,018,831 - 46,031,356 (-)Ensembl
RefSeq Acc Id: ENSMUST00000133605
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1746,329,532 - 46,335,807 (-)Ensembl
GRCm38.p6 Ensembl1746,018,606 - 46,024,881 (-)Ensembl
RefSeq Acc Id: ENSMUST00000142321
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1746,329,759 - 46,335,728 (-)Ensembl
GRCm38.p6 Ensembl1746,018,833 - 46,024,802 (-)Ensembl
RefSeq Acc Id: ENSMUST00000142351   ⟹   ENSMUSP00000115883
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1746,329,469 - 46,343,295 (-)Ensembl
GRCm38.p6 Ensembl1746,018,543 - 46,032,369 (-)Ensembl
RefSeq Acc Id: ENSMUST00000143985
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1746,329,638 - 46,332,298 (-)Ensembl
GRCm38.p6 Ensembl1746,018,712 - 46,021,372 (-)Ensembl
RefSeq Acc Id: ENSMUST00000146149
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1746,336,122 - 46,342,282 (-)Ensembl
GRCm38.p6 Ensembl1746,025,196 - 46,031,356 (-)Ensembl
RefSeq Acc Id: ENSMUST00000150327
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1746,329,405 - 46,335,790 (-)Ensembl
GRCm38.p6 Ensembl1746,018,479 - 46,024,864 (-)Ensembl
RefSeq Acc Id: NM_001025250   ⟹   NP_001020421
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391746,327,919 - 46,343,303 (-)NCBI
GRCm381746,016,993 - 46,032,377 (-)ENTREZGENE
MGSCv371746,153,942 - 46,169,326 (-)RGD
Celera1749,448,065 - 49,463,499 (-)RGD
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001025257   ⟹   NP_001020428
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391746,327,919 - 46,343,303 (-)NCBI
GRCm381746,016,993 - 46,032,377 (-)ENTREZGENE
MGSCv371746,153,942 - 46,169,326 (-)RGD
Celera1749,448,065 - 49,463,499 (-)RGD
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001110266   ⟹   NP_001103736
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391746,327,919 - 46,336,089 (-)NCBI
GRCm381746,016,993 - 46,025,163 (-)NCBI
MGSCv371746,153,942 - 46,169,326 (-)RGD
Celera1749,448,065 - 49,463,499 (-)RGD
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001110267   ⟹   NP_001103737
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391746,327,919 - 46,336,089 (-)NCBI
GRCm381746,016,993 - 46,025,163 (-)NCBI
MGSCv371746,153,942 - 46,169,326 (-)RGD
Celera1749,448,065 - 49,463,499 (-)RGD
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001110268   ⟹   NP_001103738
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391746,327,919 - 46,336,089 (-)NCBI
GRCm381746,016,993 - 46,025,163 (-)NCBI
MGSCv371746,153,942 - 46,169,326 (-)RGD
Celera1749,448,065 - 49,463,499 (-)RGD
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001287056   ⟹   NP_001273985
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391746,327,919 - 46,343,303 (-)NCBI
GRCm381746,016,993 - 46,032,377 (-)NCBI
Celera1749,448,065 - 49,463,499 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001287057   ⟹   NP_001273986
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391746,327,919 - 46,343,303 (-)NCBI
GRCm381746,016,993 - 46,032,377 (-)NCBI
Celera1749,448,065 - 49,463,499 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001287058   ⟹   NP_001273987
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391746,327,919 - 46,343,303 (-)NCBI
GRCm381746,016,993 - 46,032,377 (-)NCBI
Celera1749,448,065 - 49,463,499 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001317041   ⟹   NP_001303970
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391746,327,919 - 46,343,303 (-)NCBI
GRCm381746,016,993 - 46,032,377 (-)NCBI
Sequence:
RefSeq Acc Id: NM_009505   ⟹   NP_033531
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391746,327,919 - 46,343,303 (-)NCBI
GRCm381746,016,993 - 46,032,377 (-)ENTREZGENE
MGSCv371746,153,942 - 46,169,326 (-)RGD
Celera1749,448,065 - 49,463,499 (-)RGD
cM Map17 ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_001020421 (Get FASTA)   NCBI Sequence Viewer  
  NP_001020428 (Get FASTA)   NCBI Sequence Viewer  
  NP_001103736 (Get FASTA)   NCBI Sequence Viewer  
  NP_001103737 (Get FASTA)   NCBI Sequence Viewer  
  NP_001103738 (Get FASTA)   NCBI Sequence Viewer  
  NP_001273985 (Get FASTA)   NCBI Sequence Viewer  
  NP_001273986 (Get FASTA)   NCBI Sequence Viewer  
  NP_001273987 (Get FASTA)   NCBI Sequence Viewer  
  NP_001303970 (Get FASTA)   NCBI Sequence Viewer  
  NP_033531 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA40547 (Get FASTA)   NCBI Sequence Viewer  
  AAB22252 (Get FASTA)   NCBI Sequence Viewer  
  AAB22253 (Get FASTA)   NCBI Sequence Viewer  
  AAB22254 (Get FASTA)   NCBI Sequence Viewer  
  AAC05442 (Get FASTA)   NCBI Sequence Viewer  
  AAH61468 (Get FASTA)   NCBI Sequence Viewer  
  AAM55477 (Get FASTA)   NCBI Sequence Viewer  
  AAP86647 (Get FASTA)   NCBI Sequence Viewer  
  AAU11325 (Get FASTA)   NCBI Sequence Viewer  
  AAU95484 (Get FASTA)   NCBI Sequence Viewer  
  AAU95485 (Get FASTA)   NCBI Sequence Viewer  
  AAV32504 (Get FASTA)   NCBI Sequence Viewer  
  ABK27265 (Get FASTA)   NCBI Sequence Viewer  
  ADY05339 (Get FASTA)   NCBI Sequence Viewer  
  BAC54913 (Get FASTA)   NCBI Sequence Viewer  
  EDL23467 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000024747
  ENSMUSP00000024747.8
  ENSMUSP00000071575
  ENSMUSP00000071575.6
  ENSMUSP00000109147.2
  ENSMUSP00000109148
  ENSMUSP00000109148.2
  ENSMUSP00000115883
  ENSMUSP00000115883.3
GenBank Protein Q00731 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001020428   ⟸   NM_001025257
- Peptide Label: isoform 3
- UniProtKB: F8WH10 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_033531   ⟸   NM_009505
- Peptide Label: isoform 2
- UniProtKB: F8WH10 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001020421   ⟸   NM_001025250
- Peptide Label: isoform 1
- UniProtKB: Q00731 (UniProtKB/Swiss-Prot),   O70123 (UniProtKB/Swiss-Prot),   Q6WZL9 (UniProtKB/Swiss-Prot),   Q6GT23 (UniProtKB/Swiss-Prot),   Q66S31 (UniProtKB/Swiss-Prot),   F8WH81 (UniProtKB/TrEMBL),   F8WH10 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001103736   ⟸   NM_001110266
- Peptide Label: isoform 4 precursor
- UniProtKB: Q00731 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001103737   ⟸   NM_001110267
- Peptide Label: isoform 5 precursor
- UniProtKB: Q00731 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001103738   ⟸   NM_001110268
- Peptide Label: isoform 6 precursor
- UniProtKB: Q00731 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001273987   ⟸   NM_001287058
- Peptide Label: isoform 9 precursor
- UniProtKB: A0FKR4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001273986   ⟸   NM_001287057
- Peptide Label: isoform Vegf-A precursor
- UniProtKB: E9Q4N8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001273985   ⟸   NM_001287056
- Peptide Label: isoform 7 precursor
- UniProtKB: E9Q4N8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001303970   ⟸   NM_001317041
- Peptide Label: isoform Vegf-Ax precursor
- UniProtKB: E9Q4N8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000071575   ⟸   ENSMUST00000071648
RefSeq Acc Id: ENSMUSP00000109147   ⟸   ENSMUST00000113519
RefSeq Acc Id: ENSMUSP00000109148   ⟸   ENSMUST00000113520
RefSeq Acc Id: ENSMUSP00000115883   ⟸   ENSMUST00000142351
RefSeq Acc Id: ENSMUSP00000024747   ⟸   ENSMUST00000024747
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q00731-F1-model_v2 AlphaFold Q00731 1-214 view protein structure

Promoters
RGD ID:13676190
Promoter ID:EPDNEW_M22244
Type:multiple initiation site
Name:Vegfa_1
Description:Mus musculus vascular endothelial growth factor A , transcriptvariant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381746,032,374 - 46,032,434EPDNEW
RGD ID:6847477
Promoter ID:MM_ACW:22844
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2,   3T3L1_Day4,   3T3L1_Day6
Transcripts:VEGFA.ESEP07-UNSPLICED
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361746,155,546 - 46,157,142 (-)MPROMDB
RGD ID:6828879
Promoter ID:MM_KWN:23607
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   Brain,   Kidney,   Liver,   Lung,   MEF_B6
Transcripts:OTTMUST00000039107
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361746,157,886 - 46,158,842 (-)MPROMDB
RGD ID:6828878
Promoter ID:MM_KWN:23608
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   Brain,   Liver,   Lung
Transcripts:NM_001110266,   NM_001110267,   NM_001110268
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361746,161,491 - 46,162,992 (-)MPROMDB
RGD ID:6828880
Promoter ID:MM_KWN:23609
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   Brain,   Kidney,   Lung,   MEF_B6
Transcripts:UC008CRQ.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361746,164,881 - 46,166,087 (-)MPROMDB
RGD ID:6828906
Promoter ID:MM_KWN:23610
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000024747,   ENSMUST00000071648,   ENSMUST00000074629,   ENSMUST00000113518,   ENSMUST00000113519,   ENSMUST00000113520,   UC008CRR.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361746,168,221 - 46,169,372 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:103178 AgrOrtholog
Ensembl Genes ENSMUSG00000023951 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000024747 ENTREZGENE
  ENSMUST00000024747.14 UniProtKB/Swiss-Prot
  ENSMUST00000071648 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000071648.12 UniProtKB/Swiss-Prot
  ENSMUST00000113519.2 UniProtKB/TrEMBL
  ENSMUST00000113520 ENTREZGENE
  ENSMUST00000113520.8 UniProtKB/TrEMBL
  ENSMUST00000142351 ENTREZGENE
  ENSMUST00000142351.9 UniProtKB/Swiss-Prot
Gene3D-CATH 2.10.160.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.10.90.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Cystine-knot_cytokine UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PD_growth_factor_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PDGF/VEGF_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VEGF_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VEGF_C_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:22339 UniProtKB/Swiss-Prot
MGD MGI:103178 ENTREZGENE
NCBI Gene 22339 ENTREZGENE
PANTHER VASCULAR ENDOTHELIAL GROWTH FACTOR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VASCULAR ENDOTHELIAL GROWTH FACTOR A UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam PDGF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VEGF_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB VEGFA RGD
PhenoGen Vegfa PhenoGen
PROSITE PDGF_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PDGF_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART PDGF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF57501 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF57593 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0FKR4 ENTREZGENE, UniProtKB/TrEMBL
  E9Q4N8 ENTREZGENE, UniProtKB/TrEMBL
  E9Q4N9_MOUSE UniProtKB/TrEMBL
  F8T7H0_MOUSE UniProtKB/TrEMBL
  F8WH10 ENTREZGENE, UniProtKB/TrEMBL
  F8WH81 ENTREZGENE
  O70123 ENTREZGENE
  Q00731 ENTREZGENE
  Q5UD54_MOUSE UniProtKB/TrEMBL
  Q66S31 ENTREZGENE
  Q6GT23 ENTREZGENE
  Q6WZL9 ENTREZGENE
  Q6YLN3_MOUSE UniProtKB/TrEMBL
  VEGFA_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary F8WH81 UniProtKB/Swiss-Prot
  O70123 UniProtKB/Swiss-Prot
  Q66S31 UniProtKB/Swiss-Prot
  Q6GT23 UniProtKB/Swiss-Prot
  Q6WZL9 UniProtKB/Swiss-Prot