Fst (follistatin) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Fst (follistatin) Rattus norvegicus
Analyze
Symbol: Fst
Name: follistatin
RGD ID: 2633
Description: Enables heparan sulfate proteoglycan binding activity. Involved in cellular response to growth factor stimulus. Predicted to be located in cytoplasm and nucleus. Predicted to be active in extracellular space. Human ortholog(s) of this gene implicated in polycystic ovary syndrome. Orthologous to human FST (follistatin); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; transforming growth factor-beta superfamily mediated signaling pathway; INTERACTS WITH 1-naphthyl isothiocyanate; 17alpha-ethynylestradiol; 17beta-estradiol.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: activin-binding protein; FOL1; follistatin-A; FS; Fst-288; LOC686745; RATFOL1; similar to follistatin
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Is Marker For: Strains:   SHRSP.WKY-(D2Rat13-D2Rat157)/Gcrc   WKY.SHRSP-(Fst-Pklr)/Gcrc   SHRSP.WKY-(D2Rat13-D2Mit5)/Gcrc  
QTLs:   Bp132  
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8247,856,345 - 47,863,670 (-)NCBIGRCr8
mRatBN7.2246,123,260 - 46,130,584 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl246,123,439 - 46,130,571 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx253,226,536 - 53,233,459 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0251,284,901 - 51,291,822 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0246,164,805 - 46,171,742 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0246,537,589 - 46,544,813 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl246,538,700 - 46,544,457 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0265,576,721 - 65,583,918 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4246,542,246 - 46,550,678 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1246,470,478 - 46,478,911 (-)NCBI
Celera241,883,386 - 41,889,989 (-)NCBICelera
Cytogenetic Map2q14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
FstRatBrain Hypoxia-Ischemia  IEP 329322882mRNA:decreased expression:brain (rat)RGD 
FstRatpolycystic ovary syndrome  ISORGD:7340081601259DNA:polymorphismRGD 
FstRatrespiratory failure  ISORGD:10603737711 RGD 
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
FstRatNeurodevelopmental Disorders  ISORGD:7340088554872ClinVar Annotator: match by term: Neurodevelopmental disorderClinVarPMID:25741868
FstRatorofacial cleft  ISORGD:7340088554872ClinVar Annotator: match by term: Orofacial cleftClinVarPMID:31215115
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
FstRatAcute Liver Failure  ISORGD:73400811554173CTD Direct Evidence: marker/mechanismCTDPMID:12560755
FstRatBreast Neoplasms  ISORGD:73400811554173CTD Direct Evidence: marker/mechanismCTDPMID:16298037
FstRathepatocellular carcinoma  ISORGD:73400811554173CTD Direct Evidence: marker/mechanismCTDPMID:12203361|PMID:19363144
FstRatLiver Neoplasms  ISORGD:73400811554173CTD Direct Evidence: marker/mechanismCTDPMID:12203361
FstRatmuscular atrophy  ISORGD:73400811554173CTD Direct Evidence: therapeuticCTDPMID:33034787
FstRatSpontaneous Abortions  ISORGD:73400811554173CTD Direct Evidence: marker/mechanismCTDPMID:18539642
FstRatStomach Neoplasms  ISORGD:73400811554173CTD Direct Evidence: marker/mechanismCTDPMID:16367923
FstRatWeight Loss  ISORGD:73400811554173CTD Direct Evidence: therapeuticCTDPMID:33034787
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
FstRatrestrictive dermopathy  ISSRGD:1060313592920OMIM:275210MouseDO 

1 to 20 of 244 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
FstRat1-Hydroxypyrene multiple interactionsISORGD:7340086480464[Polycyclic Aromatic Hydrocarbons results in increased abundance of 1-hydroxypyrene] which results in increased expression of more ...CTDPMID:31228248
FstRat1-naphthyl isothiocyanate increases expressionEXP 64804641-Naphthylisothiocyanate results in increased expression of FST mRNACTDPMID:30723492
FstRat17alpha-ethynylestradiol decreases expressionEXP 6480464Ethinyl Estradiol results in decreased expression of FST mRNACTDPMID:12655037|PMID:15834898|PMID:17351261|PMID:17557909
FstRat17alpha-ethynylestradiol affects expressionEXP 6480464Ethinyl Estradiol affects the expression of FST mRNACTDPMID:16551644|PMID:26865667
FstRat17beta-estradiol affects expressionISORGD:7340086480464Estradiol affects the expression of FST mRNACTDPMID:14699072
FstRat17beta-estradiol affects expressionEXP 6480464Estradiol affects the expression of FST mRNACTDPMID:32145629
FstRat17beta-estradiol multiple interactionsISORGD:106036480464[Estradiol co-treated with Progesterone co-treated with Corn Oil] results in increased expression of FST mRNACTDPMID:32186404
FstRat17beta-estradiol multiple interactionsISORGD:7340086480464Estradiol inhibits the reaction [Fulvestrant results in increased expression of FST mRNA]; Fulvestrant inhibits the more ...CTDPMID:31646340
FstRat17beta-estradiol increases expressionISORGD:7340086480464Estradiol results in increased expression of FST mRNACTDPMID:31646340
FstRat17beta-estradiol increases expressionISORGD:106036480464Estradiol results in increased expression of FST mRNACTDPMID:19484750|PMID:39298647
FstRat17beta-estradiol decreases expressionISORGD:106036480464Estradiol results in decreased expression of FST mRNA; Estradiol results in decreased expression of FST more ...CTDPMID:22285243|PMID:23144751
FstRat17beta-estradiol decreases expressionISORGD:7340086480464Estradiol results in decreased expression of FST mRNACTDPMID:16298037
FstRat17beta-hydroxy-5alpha-androstan-3-one decreases expressionISORGD:106036480464Dihydrotestosterone results in decreased expression of FST mRNACTDPMID:17023530
FstRat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISORGD:7340086480464Cycloheximide inhibits the reaction [Tetrachlorodibenzodioxin results in increased expression of FST mRNA]CTDPMID:11007951
FstRat2,3,7,8-tetrachlorodibenzodioxine affects expressionEXP 6480464Tetrachlorodibenzodioxin affects the expression of FST mRNACTDPMID:34747641
FstRat2,3,7,8-tetrachlorodibenzodioxine decreases expressionISORGD:106036480464Tetrachlorodibenzodioxin results in decreased expression of FST mRNACTDPMID:19770486|PMID:19933214|PMID:26290441
FstRat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsEXP 64804642-methyl-2H-pyrazole-3-carboxylic acid (2-methyl-4-o-tolylazophenyl)amide inhibits the reaction [Tetrachlorodibenzodioxin results in increased expression of FST mRNA]; AHR more ...CTDPMID:23196670
FstRat2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of FST mRNACTDPMID:23196670|PMID:32109520
FstRat2,3,7,8-tetrachlorodibenzodioxine affects expressionISORGD:106036480464Tetrachlorodibenzodioxin affects the expression of FST mRNACTDPMID:21570461
FstRat2,3,7,8-tetrachlorodibenzodioxine decreases expressionISORGD:7340086480464Tetrachlorodibenzodioxin results in decreased expression of FST mRNACTDPMID:20106945|PMID:21632981

1 to 20 of 244 rows

Biological Process
1 to 20 of 33 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
FstRatameloblast differentiation acts_upstream_ofIEAUniProtKB:P47931|ensembl:ENSMUSP000000222871600115GO_REF:0000107EnsemblGO_REF:0000107
FstRatameloblast differentiation acts_upstream_ofISORGD:106031624291MGI:1857467|MGI:88180 PMID:15525533RGDPMID:15525533
FstRatBMP signaling pathway acts_upstream_of_or_withinISORGD:106031624291MGI:88180 PMID:15525533RGDPMID:15525533
FstRatBMP signaling pathway acts_upstream_of_or_withinIEAUniProtKB:P47931|ensembl:ENSMUSP000000222871600115GO_REF:0000107EnsemblGO_REF:0000107
FstRatcell differentiation involved_inIBAFB:FBgn0030439|FB:FBgn0037405|MGI:102793|MGI:95586|PANTHER:PTN000099219|UniProtKB:A0A8M9PKT2|UniProtKB:O95633|UniProtKB:P19883|UniProtKB:Q9NQ38|ZFIN:ZDB-GENE-030131-3029|ZFIN:ZDB-GENE-030131-41481600115GO_REF:0000033GO_CentralGO_REF:0000033
FstRatcellular response to growth factor stimulus  IEP 151893499GDF-9, activin ARGD 
FstRatfemale gonad development acts_upstream_of_or_withinISORGD:106031624291MGI:1857467 PMID:15162500RGDPMID:15162500
FstRatfemale gonad development acts_upstream_of_or_withinIEAUniProtKB:P47931|ensembl:ENSMUSP000000222871600115GO_REF:0000107EnsemblGO_REF:0000107
FstRatgamete generation acts_upstream_of_or_withinISORGD:106031624291MGI:98957 PMID:15162500RGDPMID:15162500
FstRatgamete generation acts_upstream_of_or_withinIEAUniProtKB:P47931|ensembl:ENSMUSP000000222871600115GO_REF:0000107EnsemblGO_REF:0000107
FstRathair follicle morphogenesis acts_upstream_of_or_withinISORGD:106031624291MGI:1857467 PMID:12514121RGDPMID:12514121
FstRathair follicle morphogenesis acts_upstream_of_or_withinIEAUniProtKB:P47931|ensembl:ENSMUSP000000222871600115GO_REF:0000107EnsemblGO_REF:0000107
FstRathematopoietic progenitor cell differentiation involved_inISORGD:7340081624291 PMID:15451575RGDPMID:15451575
FstRathematopoietic progenitor cell differentiation involved_inIEAUniProtKB:P19883|ensembl:ENSP000002567591600115GO_REF:0000107EnsemblGO_REF:0000107
FstRatkeratinocyte proliferation acts_upstream_of_or_withinISORGD:106031624291MGI:1857467 PMID:12514121RGDPMID:12514121
FstRatkeratinocyte proliferation acts_upstream_of_or_withinIEAUniProtKB:P47931|ensembl:ENSMUSP000000222871600115GO_REF:0000107EnsemblGO_REF:0000107
FstRatnegative regulation of activin receptor signaling pathway involved_inISORGD:7340081624291 PMID:11948405, PMID:12697670, PMID:12702211RGDPMID:11948405|PMID:12697670|PMID:12702211
FstRatnegative regulation of activin receptor signaling pathway involved_inIEAUniProtKB:P19883|ensembl:ENSP000002567591600115GO_REF:0000107EnsemblGO_REF:0000107
FstRatnegative regulation of activin receptor signaling pathway involved_inIBAPANTHER:PTN001657053|UniProtKB:O95633|UniProtKB:P198831600115GO_REF:0000033GO_CentralGO_REF:0000033
FstRatnegative regulation of epithelial cell differentiation acts_upstream_of_or_withinIEAUniProtKB:P47931|ensembl:ENSMUSP000000222871600115GO_REF:0000107EnsemblGO_REF:0000107
1 to 20 of 33 rows

Cellular Component
1 to 9 of 9 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
FstRatcytoplasm located_inISORGD:106031624291 PMID:20032047RGDPMID:20032047
FstRatcytoplasm located_inIEAUniProtKB:P47931|ensembl:ENSMUSP000000222871600115GO_REF:0000107EnsemblGO_REF:0000107
FstRatextracellular region located_inIEAUniProtKB-SubCell:SL-02431600115GO_REF:0000044UniProtGO_REF:0000044
FstRatextracellular region located_inIEAUniProtKB-KW:KW-09641600115GO_REF:0000043UniProtGO_REF:0000043
FstRatextracellular region is_active_inIBAFB:FBgn0259878|MGI:1890391|PANTHER:PTN000099217|RGD:621811|UniProtKB:O95633|UniProtKB:Q9NQ38|ZFIN:ZDB-GENE-030131-41481600115GO_REF:0000033GO_CentralGO_REF:0000033
FstRatextracellular space is_active_inIBAMGI:1890391|PANTHER:PTN001657053|RGD:621811|UniProtKB:O956331600115GO_REF:0000033GO_CentralGO_REF:0000033
FstRatnucleolus located_inIEAUniProtKB-SubCell:SL-01881600115GO_REF:0000044UniProtGO_REF:0000044
FstRatnucleus located_inISORGD:106031624291 PMID:20032047RGDPMID:20032047
FstRatnucleus located_inIEAUniProtKB:P47931|ensembl:ENSMUSP000000222871600115GO_REF:0000107EnsemblGO_REF:0000107
1 to 9 of 9 rows

Molecular Function
1 to 10 of 10 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
FstRatactivin binding  TAS 728764 RGD 
FstRatactivin binding enablesIBAMGI:1890391|PANTHER:PTN001657053|UniProtKB:O95633|UniProtKB:P198831600115GO_REF:0000033GO_CentralGO_REF:0000033
FstRatactivin binding enablesIEAUniProtKB:P19883|ensembl:ENSP000002567591600115GO_REF:0000107EnsemblGO_REF:0000107
FstRatactivin binding enablesISORGD:7340081624291UniProtKB:P08476|UniProtKB:P09529 PMID:12697670RGDPMID:12697670
FstRatactivin receptor antagonist activity enablesISORGD:7340081624291 PMID:12702211RGDPMID:12702211
FstRatactivin receptor antagonist activity enablesIEAUniProtKB:P19883|ensembl:ENSP000002567591600115GO_REF:0000107EnsemblGO_REF:0000107
FstRatheparan sulfate proteoglycan binding  IDA 1601260 RGD 
FstRatprotein binding enablesIPIUniProtKB:P084768554128PMID:16482217IntAct 
FstRatprotein binding enablesISORGD:7340081624291UniProtKB:P03950|UniProtKB:P08476|UniProtKB:P10599|UniProtKB:P49639|UniProtKB:Q02930-3|UniProtKB:Q14689|UniProtKB:Q8NEC5|UniProtKB:Q8TAU3|UniProtKB:Q96SQ5|UniProtKB:Q9BXY8 PMID:16198295, PMID:17991437, PMID:20860622, PMID:32296183RGDPMID:16198295|PMID:17991437|PMID:20860622|PMID:32296183
FstRatprotein binding enablesISORGD:734008,UniProtKB:P19883-21624291UniProtKB:O95390 PMID:28257634RGDPMID:28257634
1 to 10 of 10 rows

Imported Annotations - KEGG (archival)

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
FstRattransforming growth factor-beta superfamily mediated signaling pathway  IEA 6907045 KEGGrno:04350

Imported Annotations - PID (archival)

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
FstRatBone morphogenetic proteins signaling pathway  ISORGD:7340086484113 PIDPID:200144

1 to 20 of 27 rows
#
Reference Title
Reference Citation
1. Dynamics of messenger RNAs encoding inhibin/activin subunits and follistatin in the ovary during the rat estrous cycle. Arai KY, etal., Biol Reprod. 2002 Apr;66(4):1119-26.
2. Rat anterior pituitary folliculostellate cells are targets of interleukin-1beta and a major source of intrapituitary follistatin. Bilezikjian LM, etal., Endocrinology 2003 Feb;144(2):732-40.
3. GnRH pulse frequency modulation of gonadotropin subunit gene transcription in normal gonadotropes-assessment by primary transcript assay provides evidence for roles of GnRH and follistatin. Burger LL, etal., Endocrinology 2002 Sep;143(9):3243-9.
4. Mapping of rat chromosome 2 markers generated from chromosome-sorted DNA. Deng AY, etal., Mamm Genome 1997 Oct;8(10):731-5.
5. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
6. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
7. betaA- and betaC-activin, follistatin, activin receptor mRNA and betaC-activin peptide expression during rat liver regeneration. Gold EJ, etal., J Mol Endocrinol. 2005 Apr;34(2):505-15.
8. Structural basis for the inhibition of activin signalling by follistatin. Harrington AE, etal., EMBO J. 2006 Mar 8;25(5):1035-45. Epub 2006 Feb 16.
9. Crystal structures of the heparan sulfate-binding domain of follistatin. Insights into ligand binding. Innis CA and Hyvonen M, J Biol Chem. 2003 Oct 10;278(41):39969-77. Epub 2003 Jul 16.
10. Multiple defects and perinatal death in mice deficient in follistatin. Matzuk MM, etal., Nature 1995 Mar 23;374(6520):360-3.
11. Granulosa cell tumor mutant FOXL2C134W suppresses GDF-9 and activin A-induced follistatin transcription in primary granulosa cells. McTavish KJ, etal., Mol Cell Endocrinol. 2013 Jun 15;372(1-2):57-64. doi: 10.1016/j.mce.2013.03.021. Epub 2013 Apr 6.
12. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
13. Differential expression of the pituitary gonadotropin subunit genes during male rat sexual maturation: reciprocal relationship between hypothalamic pituitary adenylate cyclase-activating polypeptide and follicle-stimulating hormone beta expression. Moore JP Jr, etal., Biol Reprod. 2003 Jul;69(1):234-41. Epub 2003 Mar 19.
14. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
15. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
16. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
17. Pituitary follistatin gene expression in female rats: evidence that inhibin regulates transcription. Prendergast KA, etal., Biol Reprod. 2004 Feb;70(2):364-70. Epub 2003 Oct 15.
18. GOA pipeline RGD automated data pipeline
19. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
20. Comprehensive gene review and curation RGD comprehensive gene curation
1 to 20 of 27 rows
PMID:8472873   PMID:11948405   PMID:12088867   PMID:12514121   PMID:12697670   PMID:12702211   PMID:15162500   PMID:15305290   PMID:15451575   PMID:15525533   PMID:16123203   PMID:16935389  
PMID:17344471   PMID:18184649   PMID:18781389   PMID:19103603   PMID:20002838   PMID:20032047   PMID:20801187   PMID:21826650   PMID:22033906   PMID:22206666   PMID:22332899   PMID:22464481  
PMID:24006456   PMID:24019467   PMID:27128567   PMID:28277126   PMID:29113826   PMID:32014555   PMID:36899937  



Fst
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8247,856,345 - 47,863,670 (-)NCBIGRCr8
mRatBN7.2246,123,260 - 46,130,584 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl246,123,439 - 46,130,571 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx253,226,536 - 53,233,459 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0251,284,901 - 51,291,822 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0246,164,805 - 46,171,742 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0246,537,589 - 46,544,813 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl246,538,700 - 46,544,457 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0265,576,721 - 65,583,918 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4246,542,246 - 46,550,678 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1246,470,478 - 46,478,911 (-)NCBI
Celera241,883,386 - 41,889,989 (-)NCBICelera
Cytogenetic Map2q14NCBI
FST
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38553,480,629 - 53,487,134 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl553,480,626 - 53,487,134 (+)EnsemblGRCh38hg38GRCh38
GRCh37552,776,459 - 52,782,964 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36552,812,352 - 52,817,680 (+)NCBINCBI36Build 36hg18NCBI36
Build 34552,812,351 - 52,817,659NCBI
Celera549,730,217 - 49,735,545 (+)NCBICelera
Cytogenetic Map5q11.2NCBI
HuRef549,748,385 - 49,754,428 (+)NCBIHuRef
CHM1_1552,779,193 - 52,785,231 (+)NCBICHM1_1
T2T-CHM13v2.0554,308,436 - 54,314,946 (+)NCBIT2T-CHM13v2.0
Fst
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3913114,588,798 - 114,595,522 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl13114,588,826 - 114,595,487 (-)EnsemblGRCm39 Ensembl
GRCm3813114,452,262 - 114,458,989 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl13114,452,290 - 114,458,951 (-)EnsemblGRCm38mm10GRCm38
MGSCv3713115,242,470 - 115,248,938 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3613115,574,219 - 115,579,464 (-)NCBIMGSCv36mm8
Celera13118,786,092 - 118,792,681 (-)NCBICelera
Cytogenetic Map13D2.2NCBI
cM Map1364.15NCBI
Fst
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544613,925,776 - 13,932,104 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495544613,925,833 - 13,932,104 (-)NCBIChiLan1.0ChiLan1.0
FST
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2460,454,897 - 60,462,481 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1558,608,522 - 58,616,019 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0560,544,495 - 60,550,516 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1562,163,655 - 62,168,218 (-)NCBIpanpan1.1PanPan1.1panPan2
FST
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1461,779,252 - 61,785,666 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl461,779,259 - 61,783,260 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha461,544,683 - 61,551,112 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0462,270,843 - 62,277,297 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl462,271,936 - 62,277,253 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1462,049,664 - 62,056,089 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0462,178,184 - 62,184,600 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0462,695,162 - 62,701,588 (-)NCBIUU_Cfam_GSD_1.0
Fst
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213205,054,434 - 205,060,754 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648013,990,929 - 13,997,248 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648013,990,967 - 13,997,248 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FST
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1632,805,932 - 32,811,421 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11632,806,341 - 32,811,382 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21634,779,040 - 34,784,066 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FST
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1449,773,646 - 49,780,343 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl449,773,980 - 49,780,333 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660821,343,148 - 1,349,927 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fst
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247595,798,067 - 5,805,254 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247595,799,127 - 5,804,802 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Fst
43 total Variants

Predicted Target Of
Summary Value
Count of predictions:48
Count of miRNA genes:46
Interacting mature miRNAs:47
Transcripts:ENSRNOT00000015680
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 49 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2293671Bss44Bone structure and strength QTL 4410.970.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)243162366148478373Rat
1298074Bp164Blood pressure QTL 1640.003arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242804607202447032Rat
2293676Bmd19Bone mineral density QTL 1910.70.0001femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)243162366111362592Rat
10755499Bp389Blood pressure QTL 3892.61arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)218960362228801039Rat
2293682Bmd24Bone mineral density QTL 248.90.0001femur mineral mass (VT:0010011)compact volumetric bone mineral density (CMO:0001730)243162366111362592Rat
731167Glom4Glomerulus QTL 42.40.0082kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)22030467265304672Rat
152025242Bw191Body weight QTL 1913.62body mass (VT:0001259)238573329122609194Rat
1302794Stl27Serum triglyceride level QTL 274.40.0001blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)225413423143657569Rat
61467Bp14Blood pressure QTL 142.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)243154682202446871Rat
10402051Gdil2Gastrointestinal dilation QTL 2enteric ganglion morphology trait (VT:0001045)length of intestine affected by colonic aganglionosis to total length of colon ratio (CMO:0001836)22490385374786777Rat

1 to 10 of 49 rows
D2Wox13  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8247,863,756 - 47,863,910 (+)Marker Load Pipeline
mRatBN7.2246,130,672 - 46,130,826 (+)MAPPERmRatBN7.2
Rnor_6.0246,544,917 - 46,545,070NCBIRnor6.0
Rnor_5.0265,584,009 - 65,584,162UniSTSRnor5.0
RGSC_v3.4246,551,143 - 46,551,296UniSTSRGSC3.4
RGSC_v3.4246,551,142 - 46,551,296RGDRGSC3.4
RGSC_v3.1246,479,375 - 46,479,529RGD
RH 3.4 Map2297.6UniSTS
RH 3.4 Map2297.6RGD
RH 2.0 Map2267.2RGD
Cytogenetic Map2q16UniSTS
D2Arb3  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2246,130,674 - 46,130,822 (+)MAPPERmRatBN7.2
Rnor_6.0246,544,919 - 46,545,066NCBIRnor6.0
Rnor_5.0265,584,011 - 65,584,158UniSTSRnor5.0
RGSC_v3.4246,551,144 - 46,551,292RGDRGSC3.4
RGSC_v3.4246,551,145 - 46,551,292UniSTSRGSC3.4
RGSC_v3.1246,479,377 - 46,479,525RGD
Cytogenetic Map2q16UniSTS
AA858520  
Rat AssemblyChrPosition (strand)SourceJBrowse
RH 3.4 Map2293.1UniSTS
Cytogenetic Map2q16UniSTS
Fst  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.0246,539,696 - 46,541,189NCBIRnor6.0
Rnor_5.0265,578,828 - 65,580,216UniSTSRnor5.0
RGSC_v3.4246,543,186 - 46,544,783UniSTSRGSC3.4
Cytogenetic Map2q16UniSTS






alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 89 88 57 24 57 6 215 96 93 45 60 31



Ensembl Acc Id: ENSRNOT00000015680   ⟹   ENSRNOP00000015680
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl246,123,439 - 46,130,571 (-)Ensembl
Rnor_6.0 Ensembl246,538,700 - 46,544,457 (-)Ensembl
RefSeq Acc Id: NM_012561   ⟹   NP_036693
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8247,856,345 - 47,863,292 (-)NCBI
mRatBN7.2246,123,260 - 46,130,208 (-)NCBI
Rnor_6.0246,537,589 - 46,544,452 (-)NCBI
Rnor_5.0265,576,721 - 65,583,918 (-)NCBI
RGSC_v3.4246,542,246 - 46,550,678 (-)RGD
Celera241,883,386 - 41,889,989 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006231953   ⟹   XP_006232015
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8247,856,345 - 47,863,670 (-)NCBI
mRatBN7.2246,123,260 - 46,130,583 (-)NCBI
Rnor_6.0246,537,589 - 46,544,813 (-)NCBI
Rnor_5.0265,576,721 - 65,583,918 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006231954   ⟹   XP_006232016
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8247,856,345 - 47,863,669 (-)NCBI
mRatBN7.2246,123,260 - 46,130,582 (-)NCBI
Rnor_6.0246,538,745 - 46,544,813 (-)NCBI
Rnor_5.0265,576,721 - 65,583,918 (-)NCBI
Sequence:
1 to 9 of 9 rows
Protein RefSeqs NP_036693 (Get FASTA)   NCBI Sequence Viewer  
  XP_006232015 (Get FASTA)   NCBI Sequence Viewer  
  XP_006232016 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAB60704 (Get FASTA)   NCBI Sequence Viewer  
  AAP34393 (Get FASTA)   NCBI Sequence Viewer  
  EDM10382 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000015680
  ENSRNOP00000015680.1
GenBank Protein P21674 (Get FASTA)   NCBI Sequence Viewer  
1 to 9 of 9 rows
RefSeq Acc Id: NP_036693   ⟸   NM_012561
- Peptide Label: precursor
- UniProtKB: Q80XW7 (UniProtKB/Swiss-Prot),   P21674 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006232015   ⟸   XM_006231953
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006232016   ⟸   XM_006231954
- Peptide Label: isoform X2
- Sequence:
Ensembl Acc Id: ENSRNOP00000015680   ⟸   ENSRNOT00000015680
Follistatin-like   Kazal-like   TB

Name Modeler Protein Id AA Range Protein Structure
AF-P21674-F1-model_v2 AlphaFold P21674 1-344 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



1 to 33 of 33 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-54336 BioCyc
Ensembl Genes ENSRNOG00000011631 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000015680 ENTREZGENE
  ENSRNOT00000015680.5 UniProtKB/Swiss-Prot
Gene3D-CATH 3.30.60.30 UniProtKB/Swiss-Prot
  3.90.290.10 UniProtKB/Swiss-Prot
InterPro Fol_N UniProtKB/Swiss-Prot
  Follistatin/Osteonectin_EGF UniProtKB/Swiss-Prot
  Kazal_dom UniProtKB/Swiss-Prot
  Kazal_dom_sf UniProtKB/Swiss-Prot
  Prot_Inhib_GrowthFact_Antg UniProtKB/Swiss-Prot
  TB_dom UniProtKB/Swiss-Prot
  TB_dom_sf UniProtKB/Swiss-Prot
KEGG Report rno:24373 UniProtKB/Swiss-Prot
NCBI Gene 24373 ENTREZGENE
PANTHER AGRIN UniProtKB/Swiss-Prot
  FOLLISTATIN-RELATED UniProtKB/Swiss-Prot
Pfam FOLN UniProtKB/Swiss-Prot
  FST_N UniProtKB/Swiss-Prot
  Kazal_2 UniProtKB/Swiss-Prot
PhenoGen Fst PhenoGen
PROSITE KAZAL_2 UniProtKB/Swiss-Prot
  PS51364 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000011631 RatGTEx
SMART FOLN UniProtKB/Swiss-Prot
  KAZAL UniProtKB/Swiss-Prot
Superfamily-SCOP SSF100895 UniProtKB/Swiss-Prot
  SSF57581 UniProtKB/Swiss-Prot
TIGR TC201576
UniProt A6I5S4_RAT UniProtKB/TrEMBL
  FST_RAT UniProtKB/Swiss-Prot, ENTREZGENE
  Q80XW7 ENTREZGENE
UniProt Secondary Q80XW7 UniProtKB/Swiss-Prot
1 to 33 of 33 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-03-29 Fst  follistatin  LOC686745  similar to follistatin  Data merged from RGD:1593716 737654 PROVISIONAL
2006-11-20 LOC686745  similar to follistatin      Symbol and Name status set to provisional 70820 PROVISIONAL
2002-06-10 Fst  follistatin      Symbol and Name status set to approved 70586 APPROVED

Note Type Note Reference
gene_disease mRNA is overexpressed in some hepatocellular carcinomas 728764