AGO1 (argonaute RISC component 1) - Rat Genome Database

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Gene: AGO1 (argonaute RISC component 1) Homo sapiens
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Symbol: AGO1
Name: argonaute RISC component 1
RGD ID: 1312163
HGNC Page HGNC:3262
Description: Enables RNA binding activity; RNA polymerase II complex binding activity; and core promoter sequence-specific DNA binding activity. Involved in negative regulation of angiogenesis and regulation of gene expression. Located in cytoplasmic ribonucleoprotein granule and cytosol. Part of RISC complex and RISC-loading complex. Implicated in alcohol dependence.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: argonaute 1; argonaute 1, RISC catalytic component; argonaute RISC catalytic component 1; argonaute1; DKFZp686M13167; eIF-2C 1; EIF2C; eIF2C 1; EIF2C1; eukaryotic translation initiation factor 2C, 1; GERP95; Golgi Endoplasmic Reticulum protein 95 kDa; hAgo1; NEDLBAS; protein argonaute-1; putative RNA-binding protein Q99; Q99
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38135,869,761 - 35,930,532 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl135,869,808 - 35,930,532 (+)EnsemblGRCh38hg38GRCh38
GRCh37136,335,362 - 36,396,133 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36136,121,397 - 36,162,486 (+)NCBINCBI36Build 36hg18NCBI36
Build 34136,017,902 - 36,058,992NCBI
Celera134,623,239 - 34,664,327 (+)NCBICelera
Cytogenetic Map1p34.3NCBI
HuRef134,466,263 - 34,506,900 (+)NCBIHuRef
CHM1_1136,465,187 - 36,506,280 (+)NCBICHM1_1
T2T-CHM13v2.0135,732,654 - 35,793,426 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
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Original Reference(s)
AGO1Humanalcohol dependence susceptibilityIAGP 401900681DNA:SNP:intron:A>G(rs595961)(human)RGD 
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AGO1HumanCharcot-Marie-Tooth disease dominant intermediate C  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Charcot-Marie-Tooth disease dominant intermediate CClinVarPMID:28492532
AGO1Humangenetic disease  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:23809764 more ...
AGO1Humangenetic disease  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVar 
AGO1Humangenetic disease  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:25741868
AGO1Humanintellectual disability  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Intellectual disabilityClinVarPMID:25356899 more ...
AGO1Humanintellectual disability  IAGP (Homo sapiens) and (Homo sapiens)8554872ClinVar Annotator: match by term: Intellectual disabilityClinVarPMID:34930816
AGO1Humanintellectual disability  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Intellectual disabilityClinVar 
AGO1Humanintellectual disability  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Intellectual disabilityClinVarPMID:27620904 and PMID:34930816
AGO1HumanNEURODEVELOPMENTAL DISORDER WITH LANGUAGE DELAY AND BEHAVIORAL ABNORMALITIES, WITH OR WITHOUT SEIZURES  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Neurodevelopmental disorder with language delay and behavioral abnormalities and with or without seizuresClinVarPMID:23020937 more ...
AGO1HumanNEURODEVELOPMENTAL DISORDER WITH LANGUAGE DELAY AND BEHAVIORAL ABNORMALITIES, WITH OR WITHOUT SEIZURES  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Neurodevelopmental disorder with language delay and behavioral abnormalities and with or without seizuresClinVarPMID:25741868
AGO1HumanNEURODEVELOPMENTAL DISORDER WITH LANGUAGE DELAY AND BEHAVIORAL ABNORMALITIES, WITH OR WITHOUT SEIZURES  IAGP (Homo sapiens) and (Homo sapiens)8554872ClinVar Annotator: match by term: Neurodevelopmental disorder with language delay and behavioral abnormalities and with or without seizuresClinVarPMID:34930816
AGO1HumanNEURODEVELOPMENTAL DISORDER WITH LANGUAGE DELAY AND BEHAVIORAL ABNORMALITIES, WITH OR WITHOUT SEIZURES  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: AGO1-related conditionClinVarPMID:28492532
AGO1HumanNEURODEVELOPMENTAL DISORDER WITH LANGUAGE DELAY AND BEHAVIORAL ABNORMALITIES, WITH OR WITHOUT SEIZURES  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: AGO1-related conditionClinVarPMID:25741868 and PMID:28492532
AGO1HumanNEURODEVELOPMENTAL DISORDER WITH LANGUAGE DELAY AND BEHAVIORAL ABNORMALITIES, WITH OR WITHOUT SEIZURES  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Neurodevelopmental disorder with language delay and behavioral abnormalities and with or without seizuresClinVarPMID:27620904 and PMID:34930816
AGO1HumanNEURODEVELOPMENTAL DISORDER WITH LANGUAGE DELAY AND BEHAVIORAL ABNORMALITIES, WITH OR WITHOUT SEIZURES  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Neurodevelopmental disorder with language delay and behavioral abnormalities and with or without seizuresClinVarPMID:25356899 more ...
AGO1HumanNEURODEVELOPMENTAL DISORDER WITH LANGUAGE DELAY AND BEHAVIORAL ABNORMALITIES, WITH OR WITHOUT SEIZURES  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Neurodevelopmental disorder with language delay and behavioral abnormalities and with or without seizuresClinVar 
AGO1HumanNeurodevelopmental Disorders  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Neurodevelopmental abnormalityClinVarPMID:23020937 more ...
AGO1HumanNeurodevelopmental Disorders  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Neurodevelopmental disorderClinVarPMID:25741868 and PMID:30213762
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AGO1Humanmalignant mesothelioma  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:25756049
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AGO1HumanNEURODEVELOPMENTAL DISORDER WITH LANGUAGE DELAY AND BEHAVIORAL ABNORMALITIES, WITH OR WITHOUT SEIZURES  IAGP 7240710 OMIM 

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Original Reference(s)
AGO1Human(+)-catechin multiple interactionsEXP 6480464[Catechin co-treated with Grape Seed Proanthocyanidins] results in increased expression of AGO1 mRNACTDPMID:24763279
AGO1Human(1->4)-beta-D-glucan multiple interactionsISOAgo1 (Mus musculus)6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in decreased expression of AGO1 mRNACTDPMID:36331819
AGO1Human1,2-dimethylhydrazine decreases expressionISOAgo1 (Mus musculus)64804641 and 2-Dimethylhydrazine results in decreased expression of AGO1 mRNACTDPMID:22206623
AGO1Human1-[(4-chlorophenyl)-phenylmethyl]-4-methylpiperazine decreases expressionISOAgo1 (Rattus norvegicus)6480464chlorcyclizine results in decreased expression of AGO1 mRNACTDPMID:21058326
AGO1Human17alpha-ethynylestradiol increases expressionISOAgo1 (Rattus norvegicus)6480464Ethinyl Estradiol results in increased expression of AGO1 mRNACTDPMID:29097150
AGO1Human17beta-estradiol affects expressionEXP 6480464Estradiol affects the expression of AGO1 mRNACTDPMID:22574217
AGO1Human17beta-estradiol increases expressionISOAgo1 (Mus musculus)6480464Estradiol results in increased expression of AGO1 mRNACTDPMID:39298647
AGO1Human17beta-estradiol multiple interactionsISOAgo1 (Rattus norvegicus)6480464[bisphenol A co-treated with Estradiol] results in decreased expression of AGO1 mRNACTDPMID:26496021
AGO1Human4,4'-diaminodiphenylmethane increases expressionISOAgo1 (Mus musculus)64804644 and 4'-diaminodiphenylmethane results in increased expression of AGO1 mRNACTDPMID:18648102
AGO1Human4,4'-sulfonyldiphenol decreases expressionISOAgo1 (Mus musculus)6480464bisphenol S results in decreased expression of AGO1 mRNACTDPMID:39298647
AGO1Human4,4'-sulfonyldiphenol multiple interactionsISOAgo1 (Rattus norvegicus)6480464[bisphenol A co-treated with bisphenol F co-treated with bisphenol S] results in increased expression of AGO1 mRNACTDPMID:36041667
AGO1Humanaconitine increases expressionISOAgo1 (Rattus norvegicus)6480464Aconitine results in increased expression of AGO1 proteinCTDPMID:33236894
AGO1Humanacrylamide decreases expressionEXP 6480464Acrylamide results in decreased expression of AGO1 mRNACTDPMID:32763439
AGO1Humanaflatoxin B1 decreases methylationEXP 6480464Aflatoxin B1 results in decreased methylation of AGO1 geneCTDPMID:27153756
AGO1Humanaflatoxin B1 increases methylationEXP 6480464Aflatoxin B1 results in increased methylation of AGO1 exonCTDPMID:30157460
AGO1Humanall-trans-retinoic acid increases expressionEXP 6480464Tretinoin results in increased expression of AGO1 mRNACTDPMID:16140955 and PMID:33167477
AGO1Humanamitrole decreases expressionISOAgo1 (Rattus norvegicus)6480464Amitrole results in decreased expression of AGO1 mRNACTDPMID:38685447
AGO1Humanamphetamine decreases expressionISOAgo1 (Rattus norvegicus)6480464Amphetamine results in decreased expression of AGO1 mRNACTDPMID:30779732
AGO1Humanarsenite(3-) increases expressionISOAgo1 (Mus musculus)6480464arsenite results in increased expression of AGO1 proteinCTDPMID:37955338
AGO1Humanbenzene increases expressionEXP 6480464Benzene results in increased expression of AGO1 mRNACTDPMID:19162166

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Biological Process
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Original Reference(s)
AGO1HumanmiRNA metabolic process acts_upstream_of_or_withinIEAUniProtKB:Q8CJG1 and ensembl:ENSMUSP00000095498150520179 EnsemblGO_REF:0000107
AGO1HumanmiRNA processing involved_inIMP 150520179 PMID:22795694BHF-UCLPMID:22795694
AGO1HumanmiRNA-mediated gene silencing by inhibition of translation involved_inIDA 150520179 PMID:18771919UniProtPMID:18771919
AGO1HumanmiRNA-mediated gene silencing by mRNA destabilization NOT|involved_inIDA 150520179 PMID:15260970BHF-UCLPMID:15260970
AGO1Humannegative regulation of angiogenesis involved_inIMP 150520179 PMID:23426184BHF-UCLPMID:23426184
AGO1Humannuclear-transcribed mRNA catabolic process involved_inIDA 150520179 PMID:18771919UniProtPMID:18771919
AGO1Humanpositive regulation of gene expression involved_inISOAgo1 (Mus musculus)9068941 PMID:26764146BHF-UCLPMID:26764146
AGO1Humanpositive regulation of gene expression acts_upstream_of_or_withinIEAUniProtKB:Q8CJG1 and ensembl:ENSMUSP00000095498150520179 EnsemblGO_REF:0000107
AGO1Humanpositive regulation of non-canonical NF-kappaB signal transduction involved_inIEAUniProtKB:Q8CJG1 and ensembl:ENSMUSP00000095498150520179 EnsemblGO_REF:0000107
AGO1Humanpositive regulation of transcription by RNA polymerase II involved_inIMP 150520179 PMID:25336585BHF-UCLPMID:25336585
AGO1Humanpositive regulation of transcription by RNA polymerase II acts_upstream_of_or_withinIEAUniProtKB:Q8CJG1 and ensembl:ENSMUSP00000095498150520179 EnsemblGO_REF:0000107
AGO1Humanpre-miRNA processing involved_inIDA 150520179 PMID:19966796BHF-UCLPMID:19966796
AGO1Humanpre-miRNA processing involved_inIBAMGI:2446632 more ...150520179 GO_CentralGO_REF:0000033
AGO1Humanregulation of mRNA stability  ISOAgo1 (Rattus norvegicus)9068941 RGDPMID:26846850 and REF_RGD_ID:11526737
AGO1Humanregulation of mRNA stability involved_inIEAUniProtKB:A0A8I5Y871 and ensembl:ENSRNOP00000077744150520179 EnsemblGO_REF:0000107
AGO1Humanregulation of translation involved_inIEAUniProtKB-KW:KW-0810150520179 UniProtGO_REF:0000043
AGO1Humanregulatory ncRNA-mediated gene silencing involved_inIEAUniProtKB-KW:KW-0943150520179 UniProtGO_REF:0000043
AGO1Humanregulatory ncRNA-mediated post-transcriptional gene silencing involved_inIBAFB:FBgn0087035 more ...150520179 GO_CentralGO_REF:0000033
AGO1HumanRISC complex assembly involved_inIDA 150520179 PMID:19966796BHF-UCLPMID:19966796
AGO1HumansiRNA-mediated gene silencing by mRNA destabilization NOT|involved_inIDA 150520179 PMID:15260970BHF-UCLPMID:15260970
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Cellular Component
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AGO1Humancytoplasm located_inIEAUniProtKB-KW:KW-0963150520179 UniProtGO_REF:0000043
AGO1Humancytoplasm is_active_inIBAFB:FBgn0087035 more ...150520179 GO_CentralGO_REF:0000033
AGO1Humancytoplasm located_inIDA 150520179 PMID:15260970 more ...MGIPMID:15260970 more ...
AGO1Humancytoplasmic ribonucleoprotein granule is_active_inIBAFB:FBgn0087035 more ...150520179 GO_CentralGO_REF:0000033
AGO1Humancytoplasmic ribonucleoprotein granule located_inIDA 150520179 HPAGO_REF:0000052
AGO1Humancytosol located_inIDA 150520179 HPAGO_REF:0000052
AGO1Humancytosol located_inIEAUniProtKB:Q8CJG1 and ensembl:ENSMUSP00000095498150520179 EnsemblGO_REF:0000107
AGO1Humancytosol located_inTAS 150520179 ReactomeReactome:R-HSA-1606561 more ...
AGO1Humannucleoplasm located_inTAS 150520179 ReactomeReactome:R-HSA-5578742
AGO1Humannucleus is_active_inIBAFB:FBgn0004872 more ...150520179 GO_CentralGO_REF:0000033
AGO1Humannucleus located_inIEAUniProtKB:Q8CJG1 and ensembl:ENSMUSP00000095498150520179 EnsemblGO_REF:0000107
AGO1Humannucleus located_inICGO:0001046150520179 PMID:25336585BHF-UCLPMID:25336585
AGO1HumanP-body located_inIEAUniProtKB:Q8CJG1 and ensembl:ENSMUSP00000095498150520179 EnsemblGO_REF:0000107
AGO1HumanP-body located_inIEAUniProtKB-SubCell:SL-0230150520179 UniProtGO_REF:0000044
AGO1Humanribonucleoprotein complex part_ofIEAUniProtKB-KW:KW-0687150520179 UniProtGO_REF:0000043
AGO1HumanRISC complex part_ofIBAFB:FBgn0087035 more ...150520179 GO_CentralGO_REF:0000033
AGO1HumanRISC complex part_ofIEAUniProtKB:Q8CJG1 and ensembl:ENSMUSP00000095498150520179 EnsemblGO_REF:0000107
AGO1HumanRISC complex part_ofIDA 150520179 PMID:15260970 more ...BHF-UCLPMID:15260970 more ...
AGO1HumanRISC complex part_ofIEAARBA:ARBA00044873150520179 UniProtGO_REF:0000117
AGO1HumanRISC-loading complex part_ofIDA 150520179 PMID:19966796BHF-UCLPMID:19966796
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Molecular Function
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AGO1Humancore promoter sequence-specific DNA binding enablesIMP 150520179 PMID:25336585BHF-UCLPMID:25336585
AGO1Humandouble-stranded RNA binding enablesIDA 150520179 PMID:19966796BHF-UCLPMID:19966796
AGO1HumanmiRNA binding enablesIDA 150520179 PMID:15260970BHF-UCLPMID:15260970
AGO1HumanmiRNA binding enablesIEAUniProtKB:Q8CJG1 and ensembl:ENSMUSP00000095498150520179 EnsemblGO_REF:0000107
AGO1HumanmiRNA binding enablesIBAFB:FBgn0262739 more ...150520179 GO_CentralGO_REF:0000033
AGO1Humannucleic acid binding enablesIEAInterPro:IPR003165 and InterPro:IPR036397150520179 InterProGO_REF:0000002
AGO1Humanprotein binding enablesIPIUniProtKB:Q8NDV7 more ...150520179 PMID:19383768IntActPMID:19383768
AGO1Humanprotein binding enablesIPIUniProtKB:Q66GS9150520179 PMID:35709258IntActPMID:35709258
AGO1Humanprotein binding enablesIPIUniProtKB:P08238 and UniProtKB:Q9UPY3150520179 PMID:17932509IntActPMID:17932509
AGO1Humanprotein binding enablesIPIUniProtKB:A6NIX2 more ...150520179 PMID:20616046UniProtPMID:20616046
AGO1Humanprotein binding enablesIPIUniProtKB:O15397150520179 PMID:19167051IntActPMID:19167051
AGO1Humanprotein binding enablesIPIUniProtKB:Q6NTF7 more ...150520179 PMID:22915799UniProtPMID:22915799
AGO1Humanprotein binding enablesIPIUniProtKB:P08238150520179 PMID:25036637IntActPMID:25036637
AGO1Humanprotein binding enablesIPIUniProtKB:Q9UPQ9-2150520179 PMID:17891150IntActPMID:17891150
AGO1Humanprotein binding enablesIPIUniProtKB:Q9UKV8150520179 PMID:16756390IntActPMID:16756390
AGO1Humanprotein binding enablesIPIUniProtKB:P20226150520179 PMID:25336585BHF-UCLPMID:25336585
AGO1Humanprotein binding enablesIPIUniProtKB:P04156 and UniProtKB:Q8NDV7150520179 PMID:22484317IntActPMID:22484317
AGO1Humanprotein binding enablesIPIUniProtKB:Q8NDV7 and UniProtKB:Q9UPY3150520179 PMID:19716330IntActPMID:19716330
AGO1Humanprotein binding enablesIPIUniProtKB:Q9UGP4150520179 PMID:28683311IntActPMID:28683311
AGO1Humanprotein binding enablesIPIUniProtKB:Q9HCE1150520179 PMID:16289642UniProtPMID:16289642
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RGD Manual Annotations


  
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Original Reference(s)
AGO1HumanmicroRNA pathway   TAS 4144862 RGD 
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Original Reference(s)
AGO1HumanAggressive behavior  IAGP 8699517 HPOMIM:620292 and PMID:34930816
AGO1HumanAlmond-shaped palpebral fissure  IAGP 8699517 HPOMIM:620292 and PMID:34930816
AGO1HumanAnxiety  IAGP 8699517 HPOMIM:620292 and PMID:34930816
AGO1HumanAttention deficit hyperactivity disorder  IAGP 8699517 HPOMIM:620292 and PMID:34930816
AGO1HumanAutistic behavior  IAGP 8699517 HPOMIM:620292 and PMID:34930816
AGO1HumanAutosomal dominant inheritance  IAGP 8699517 HPOMIM:620292 and PMID:23020937
AGO1HumanBilateral tonic-clonic seizure  IAGP 8699517 HPOMIM:620292 and PMID:30213762
AGO1HumanBulbous nose  IAGP 8699517 HPOMIM:620292 and PMID:30213762
AGO1HumanDelayed ability to walk  IAGP 8699517 HPOMIM:620292 and PMID:25356899
AGO1HumanDelayed speech and language development  IAGP 8699517 HPOMIM:620292 more ...
AGO1HumanDownslanted palpebral fissures  IAGP 8699517 HPOMIM:620292 and PMID:30213762
AGO1HumanEpicanthus  IAGP 8699517 HPOMIM:620292 and PMID:27620904
AGO1HumanFebrile seizure (within the age range of 3 months to 6 years)  IAGP 8699517 HPOMIM:620292 and PMID:30213762
AGO1HumanFeeding difficulties  IAGP 8699517 HPOMIM:620292 and PMID:34930816
AGO1HumanFocal impaired awareness seizure  IAGP 8699517 HPOMIM:620292 and PMID:30213762
AGO1HumanGastroesophageal reflux  IAGP 8699517 HPOMIM:620292 and PMID:34930816
AGO1HumanGlobal developmental delay  IAGP 8699517 HPOMIM:620292 more ...
AGO1HumanGlobus pallidus calcification  IAGP 8699517 HPOMIM:620292 and PMID:30213762
AGO1HumanHigh forehead  IAGP 8699517 HPOMIM:620292 and PMID:34930816
AGO1HumanHyperactivity  IAGP 8699517 HPOMIM:620292 and PMID:27620904
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Original Reference(s)
AGO1HumanIntellectual disability  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Intellectual disabilityClinVar 
AGO1HumanIntellectual disability  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Intellectual disabilityClinVar 
AGO1HumanIntellectual disability  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Mental deficiencyClinVar 
AGO1HumanIntellectual disability  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Intellectual disabilityClinVar 
AGO1HumanIntellectual disability  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Intellectual disabilityClinVarPMID:25356899 more ...
AGO1HumanIntellectual disability  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Intellectual disabilityClinVarPMID:34930816
AGO1HumanIntellectual disability  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Intellectual disabilityClinVarPMID:27620904 and PMID:34930816
AGO1HumanIntellectual disability  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Intellectual disabilityClinVarPMID:34930816
AGO1HumanNeurodevelopmental abnormality  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Neurodevelopmental abnormalityClinVarPMID:23020937 more ...
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#
Reference Title
Reference Citation
1. Argonaute proteins at a glance. Ender C and Meister G, J Cell Sci. 2010 Jun 1;123(Pt 11):1819-23.
2. Association of microRNA biogenesis pathway gene variants and alcohol dependence risk. Gedik H, etal., DNA Cell Biol. 2015 Mar;34(3):220-6. doi: 10.1089/dna.2014.2549. Epub 2014 Dec 11.
3. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
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PMID:9417904   PMID:10512872   PMID:10534406   PMID:11726686   PMID:12230974   PMID:12414724   PMID:12477932   PMID:12526743   PMID:12906857   PMID:14702039   PMID:15152257   PMID:15260970  
PMID:15489334   PMID:15908945   PMID:15937477   PMID:16196087   PMID:16289642   PMID:16710414   PMID:16756390   PMID:16936726   PMID:16936728   PMID:17267406   PMID:17400507   PMID:17482383  
PMID:17891150   PMID:17932509   PMID:18345015   PMID:18482256   PMID:18771919   PMID:18779327   PMID:19047128   PMID:19138993   PMID:19167051   PMID:19269368   PMID:19324964   PMID:19380743  
PMID:19383768   PMID:19393748   PMID:19470757   PMID:19716330   PMID:19723326   PMID:19767416   PMID:19851984   PMID:19913121   PMID:19946268   PMID:19966796   PMID:20014101   PMID:20211803  
PMID:20308539   PMID:20616046   PMID:20628086   PMID:20671708   PMID:20721975   PMID:20732906   PMID:20819778   PMID:21145461   PMID:21244100   PMID:21846468   PMID:21873635   PMID:21906983  
PMID:21948796   PMID:21963094   PMID:21988832   PMID:22025453   PMID:22231398   PMID:22474261   PMID:22484317   PMID:22647351   PMID:22658674   PMID:22681889   PMID:22795694   PMID:22858679  
PMID:22915799   PMID:22961379   PMID:23019594   PMID:23426184   PMID:23535175   PMID:23665583   PMID:23696926   PMID:23746446   PMID:23748378   PMID:23809764   PMID:24086155   PMID:24457600  
PMID:24778252   PMID:24816145   PMID:24949972   PMID:25036637   PMID:25313066   PMID:25336585   PMID:25595906   PMID:25656609   PMID:25963833   PMID:26242502   PMID:26318153   PMID:26344197  
PMID:27518285   PMID:27542412   PMID:27669275   PMID:28330616   PMID:28363942   PMID:28555645   PMID:28683311   PMID:28718761   PMID:28781232   PMID:28813667   PMID:29256262   PMID:29395067  
PMID:29487329   PMID:29507755   PMID:29509190   PMID:29845934   PMID:30213762   PMID:30770397   PMID:30858133   PMID:30995489   PMID:30997501   PMID:31330067   PMID:31343991   PMID:31586073  
1 to 10 of 14 rows



AGO1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38135,869,761 - 35,930,532 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl135,869,808 - 35,930,532 (+)EnsemblGRCh38hg38GRCh38
GRCh37136,335,362 - 36,396,133 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36136,121,397 - 36,162,486 (+)NCBINCBI36Build 36hg18NCBI36
Build 34136,017,902 - 36,058,992NCBI
Celera134,623,239 - 34,664,327 (+)NCBICelera
Cytogenetic Map1p34.3NCBI
HuRef134,466,263 - 34,506,900 (+)NCBIHuRef
CHM1_1136,465,187 - 36,506,280 (+)NCBICHM1_1
T2T-CHM13v2.0135,732,654 - 35,793,426 (+)NCBIT2T-CHM13v2.0
Ago1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394126,328,805 - 126,362,500 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4126,328,805 - 126,362,376 (-)EnsemblGRCm39 Ensembl
GRCm384126,435,012 - 126,468,707 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4126,435,012 - 126,468,583 (-)EnsemblGRCm38mm10GRCm38
MGSCv374126,112,256 - 126,145,665 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364125,941,807 - 125,970,725 (-)NCBIMGSCv36mm8
Celera4124,771,815 - 124,805,219 (-)NCBICelera
Cytogenetic Map4D2.2NCBI
cM Map460.76NCBI
Ago1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85144,006,618 - 144,064,740 (-)NCBIGRCr8
mRatBN7.25138,722,111 - 138,757,118 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5138,722,111 - 138,773,546 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5141,419,895 - 141,454,732 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05143,189,892 - 143,224,724 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05143,190,669 - 143,225,508 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05144,444,390 - 144,479,430 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5144,448,792 - 144,479,306 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05148,214,328 - 148,246,407 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45145,797,436 - 145,829,516 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15145,806,727 - 145,840,972 (-)NCBI
Celera5137,218,551 - 137,248,255 (-)NCBICelera
Cytogenetic Map5q36NCBI
Ago1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545213,934,346 - 13,968,624 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495545213,935,028 - 13,967,281 (+)NCBIChiLan1.0ChiLan1.0
AGO1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21190,922,849 - 190,963,905 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11190,038,742 - 190,085,087 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0135,148,984 - 35,196,252 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1136,324,733 - 36,370,798 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl136,324,733 - 36,360,832 (+)Ensemblpanpan1.1panPan2
AGO1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1156,258,359 - 6,294,911 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl156,263,882 - 6,295,338 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha156,501,590 - 6,538,192 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0156,394,522 - 6,431,156 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl156,395,742 - 6,431,512 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1156,247,517 - 6,284,126 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0156,321,049 - 6,352,856 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0156,330,625 - 6,367,229 (-)NCBIUU_Cfam_GSD_1.0
AGO1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl691,984,303 - 92,215,149 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1692,038,104 - 92,076,477 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2685,325,648 - 85,365,454 (+)NCBISscrofa10.2Sscrofa10.2susScr3
AGO1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12096,929,985 - 96,971,074 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2096,934,659 - 96,971,014 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603319,754,613 - 19,801,453 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ago1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476418,904,639 - 18,940,594 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476418,904,607 - 18,940,594 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in AGO1
121 total Variants

1 to 10 of 150 rows
Name
Type
Condition(s)
Position(s)
Clinical significance
NM_012199.2(AGO1):c.1021-1826G>T single nucleotide variant Lung cancer [RCV000090818] Chr1:35899648 [GRCh38]
Chr1:36365249 [GRCh37]
Chr1:1p34.3
uncertain significance
GRCh38/hg38 1p34.3(chr1:34753938-36055310)x1 copy number loss See cases [RCV000137966] Chr1:34753938..36055310 [GRCh38]
Chr1:35219539..36520911 [GRCh37]
Chr1:34992126..36293498 [NCBI36]
Chr1:1p34.3
likely pathogenic
GRCh38/hg38 1p36.11-34.2(chr1:24381206-41401517)x3 copy number gain See cases [RCV000138891] Chr1:24381206..41401517 [GRCh38]
Chr1:24707696..41886350 [GRCh37]
Chr1:24580283..41658937 [NCBI36]
Chr1:1p36.11-34.2
pathogenic
NM_012199.5(AGO1):c.2530G>C (p.Val844Leu) single nucleotide variant not provided [RCV003321241] Chr1:35919563 [GRCh38]
Chr1:36385164 [GRCh37]
Chr1:1p34.3
uncertain significance
NM_012199.5(AGO1):c.73C>G (p.Arg25Gly) single nucleotide variant not provided [RCV000420638] Chr1:35888474 [GRCh38]
Chr1:36354075 [GRCh37]
Chr1:1p34.3
uncertain significance
GRCh37/hg19 1p34.3(chr1:34830287-36945093)x1 copy number loss See cases [RCV000448022] Chr1:34830287..36945093 [GRCh37]
Chr1:1p34.3
pathogenic
GRCh37/hg19 1p34.3(chr1:35950860-36465764)x1 copy number loss See cases [RCV000448765] Chr1:35950860..36465764 [GRCh37]
Chr1:1p34.3
uncertain significance
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684)x3 copy number gain See cases [RCV000510383] Chr1:849467..249224684 [GRCh37]
Chr1:1p36.33-q44
pathogenic
NC_000001.10:g.(?_33241563)_(46663513_?)dup duplication Charcot-Marie-Tooth disease dominant intermediate C [RCV000708276] Chr1:33241563..46663513 [GRCh37]
Chr1:1p35.1-34.1
uncertain significance
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684) copy number gain See cases [RCV000510926] Chr1:849467..249224684 [GRCh37]
Chr1:1p36.33-q44
pathogenic
1 to 10 of 150 rows

Confirmed Target Of
miRNA GeneMature miRNAMethod NameResult TypeData TypeSupport TypePMID
MIR107hsa-miR-107Mirecordsexternal_info{changed}NA20042474

Predicted Target Of
Summary Value
Count of predictions:5878
Count of miRNA genes:1388
Interacting mature miRNAs:1864
Transcripts:ENST00000373204, ENST00000373206
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597255838GWAS1351912_Hschizophrenia QTL GWAS1351912 (human)4e-10schizophrenia13590822235908223Human

L18179  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37136,388,020 - 36,388,264UniSTSGRCh37
Build 36136,160,607 - 36,160,851RGDNCBI36
Celera134,662,448 - 34,662,692RGD
Cytogenetic Map1p34.3UniSTS
HuRef134,505,021 - 34,505,265UniSTS
RH104023  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37136,386,210 - 36,386,370UniSTSGRCh37
Build 36136,158,797 - 36,158,957RGDNCBI36
Celera134,660,638 - 34,660,798RGD
Cytogenetic Map1p34.3UniSTS
HuRef134,503,211 - 34,503,371UniSTS
GeneMap99-GB4 RH Map1111.15UniSTS
G64298  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37136,389,763 - 36,389,896UniSTSGRCh37
Build 36136,162,350 - 36,162,483RGDNCBI36
Celera134,664,191 - 34,664,324RGD
Cytogenetic Map1p34.3UniSTS
HuRef134,506,764 - 34,506,897UniSTS
G20793  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37136,389,636 - 36,389,884UniSTSGRCh37
Build 36136,162,223 - 36,162,471RGDNCBI36
Celera134,664,064 - 34,664,312RGD
Cytogenetic Map1p34.3UniSTS
HuRef134,506,637 - 34,506,885UniSTS
A006G35  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37136,389,636 - 36,389,884UniSTSGRCh37
Build 36136,162,223 - 36,162,471RGDNCBI36
Celera134,664,064 - 34,664,312RGD
Cytogenetic Map1p34.3UniSTS
HuRef134,506,637 - 34,506,885UniSTS
GeneMap99-GB4 RH Map1108.11UniSTS
NCBI RH Map1230.0UniSTS
SHGC-74590  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37136,387,865 - 36,387,965UniSTSGRCh37
Build 36136,160,452 - 36,160,552RGDNCBI36
Celera134,662,293 - 34,662,393RGD
Cytogenetic Map1p34.3UniSTS
HuRef134,504,866 - 34,504,966UniSTS
TNG Radiation Hybrid Map117156.0UniSTS
GeneMap99-GB4 RH Map1110.22UniSTS
NCBI RH Map1221.8UniSTS
SHGC-74594  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37136,389,367 - 36,389,514UniSTSGRCh37
Build 36136,161,954 - 36,162,101RGDNCBI36
Celera134,663,795 - 34,663,942RGD
Cytogenetic Map1p34.3UniSTS
HuRef134,506,368 - 34,506,515UniSTS
TNG Radiation Hybrid Map117156.0UniSTS
GeneMap99-GB4 RH Map1110.58UniSTS
NCBI RH Map1251.9UniSTS
EIF2C1_617  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37136,385,677 - 36,386,574UniSTSGRCh37
Build 36136,158,264 - 36,159,161RGDNCBI36
Celera134,660,105 - 34,661,002RGD
HuRef134,502,678 - 34,503,575UniSTS




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
visual system
1204 2439 2788 2253 4973 1726 2351 6 624 1951 465 2269 7306 6472 53 3734 1 852 1744 1617 175 1


1 to 25 of 25 rows
RefSeq Transcripts NM_001317122 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001317123 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_012199 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011541236 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017001016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017001017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017001018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017001019 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054335969 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF093097 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK000326 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK001622 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK002003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK025726 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK027611 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK125879 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK314148 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL139286 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC063275 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR936823 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CX781765 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HY052874 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U92986 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 25 of 25 rows

Ensembl Acc Id: ENST00000373204   ⟹   ENSP00000362300
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl135,883,209 - 35,930,532 (+)Ensembl
Ensembl Acc Id: ENST00000373206   ⟹   ENSP00000362302
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl135,869,808 - 35,920,958 (+)Ensembl
Ensembl Acc Id: ENST00000635259   ⟹   ENSP00000489254
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl135,892,580 - 35,920,019 (+)Ensembl
Ensembl Acc Id: ENST00000674304   ⟹   ENSP00000501450
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl135,883,209 - 35,924,298 (+)Ensembl
Ensembl Acc Id: ENST00000674426   ⟹   ENSP00000501372
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl135,883,209 - 35,930,532 (+)Ensembl
Ensembl Acc Id: ENST00000699841   ⟹   ENSP00000514639
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl135,883,311 - 35,921,177 (+)Ensembl
Ensembl Acc Id: ENST00000699842   ⟹   ENSP00000514640
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl135,883,352 - 35,920,939 (+)Ensembl
Ensembl Acc Id: ENST00000699843   ⟹   ENSP00000514641
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl135,883,362 - 35,920,877 (+)Ensembl
Ensembl Acc Id: ENST00000699844   ⟹   ENSP00000514642
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl135,888,605 - 35,921,149 (+)Ensembl
RefSeq Acc Id: NM_001317122   ⟹   NP_001304051
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38135,883,209 - 35,930,532 (+)NCBI
CHM1_1136,465,173 - 36,506,281 (+)NCBI
T2T-CHM13v2.0135,746,102 - 35,793,426 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001317123   ⟹   NP_001304052
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38135,869,761 - 35,930,532 (+)NCBI
CHM1_1136,451,786 - 36,506,281 (+)NCBI
T2T-CHM13v2.0135,732,654 - 35,793,426 (+)NCBI
Sequence:
RefSeq Acc Id: NM_012199   ⟹   NP_036331
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38135,883,209 - 35,930,532 (+)NCBI
GRCh37136,335,412 - 36,395,211 (+)NCBI
Build 36136,121,397 - 36,162,486 (+)NCBI Archive
HuRef134,466,263 - 34,506,900 (+)ENTREZGENE
CHM1_1136,465,173 - 36,506,281 (+)NCBI
T2T-CHM13v2.0135,746,102 - 35,793,426 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011541236   ⟹   XP_011539538
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38135,883,209 - 35,930,532 (+)NCBI
Sequence:
RefSeq Acc Id: XM_054335969   ⟹   XP_054191944
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0135,746,102 - 35,793,426 (+)NCBI
1 to 5 of 14 rows
1 to 5 of 14 rows
RefSeq Acc Id: NP_036331   ⟸   NM_012199
- Peptide Label: isoform 1
- UniProtKB: Q5TA57 (UniProtKB/Swiss-Prot),   Q6P4S0 (UniProtKB/Swiss-Prot),   Q9UL18 (UniProtKB/Swiss-Prot),   B2RAD8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011539538   ⟸   XM_011541236
- Peptide Label: isoform X1
- UniProtKB: B2RAD8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001304052   ⟸   NM_001317123
- Peptide Label: isoform 2
- UniProtKB: B3KME0 (UniProtKB/TrEMBL),   Q5TA58 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001304051   ⟸   NM_001317122
- Peptide Label: isoform 1x
- UniProtKB: B2RAD8 (UniProtKB/TrEMBL),   A0A6I8PTZ8 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSP00000501372   ⟸   ENST00000674426
PAZ   Piwi   Protein argonaute N-terminal

Name Modeler Protein Id AA Range Protein Structure
AF-Q9UL18-F1-model_v2 AlphaFold Q9UL18 1-857 view protein structure

RGD ID:6854956
Promoter ID:EPDNEW_H643
Type:initiation region
Name:AGO1_2
Description:argonaute 1, RISC catalytic component
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H644  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38135,869,807 - 35,869,867EPDNEW
RGD ID:6854958
Promoter ID:EPDNEW_H644
Type:initiation region
Name:AGO1_1
Description:argonaute 1, RISC catalytic component
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H643  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38135,883,215 - 35,883,275EPDNEW
RGD ID:6785105
Promoter ID:HG_KWN:1987
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   K562,   Lymphoblastoid,   NB4
Transcripts:OTTHUMT00000019337
Position:
Human AssemblyChrPosition (strand)Source
Build 36136,121,134 - 36,121,634 (+)MPROMDB
RGD ID:6785108
Promoter ID:HG_KWN:1988
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lymphoblastoid
Transcripts:UC009VUY.1
Position:
Human AssemblyChrPosition (strand)Source
Build 36136,132,254 - 36,132,754 (+)MPROMDB


1 to 40 of 55 rows
Database
Acc Id
Source(s)
COSMIC AGO1 COSMIC
Ensembl Genes ENSG00000092847 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000373204 ENTREZGENE
  ENST00000373204.6 UniProtKB/Swiss-Prot
  ENST00000373206 ENTREZGENE
  ENST00000674426 ENTREZGENE
Gene3D-CATH 3.30.420.10 UniProtKB/Swiss-Prot
  3.40.50.2300 UniProtKB/Swiss-Prot
  paz domain UniProtKB/Swiss-Prot
GTEx ENSG00000092847 GTEx
HGNC ID HGNC:3262 ENTREZGENE
Human Proteome Map AGO1 Human Proteome Map
InterPro ArgoL1 UniProtKB/Swiss-Prot
  ArgoL2 UniProtKB/Swiss-Prot
  Argonaute_Mid_dom UniProtKB/Swiss-Prot
  Argonaute_N UniProtKB/Swiss-Prot
  PAZ_dom UniProtKB/Swiss-Prot
  PAZ_dom_sf UniProtKB/Swiss-Prot
  Piwi UniProtKB/Swiss-Prot
  Piwi_ago-like UniProtKB/Swiss-Prot
  RNaseH-like_sf UniProtKB/Swiss-Prot
  RNaseH_sf UniProtKB/Swiss-Prot
KEGG Report hsa:26523 UniProtKB/Swiss-Prot
NCBI Gene 26523 ENTREZGENE
OMIM 606228 OMIM
PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C UniProtKB/Swiss-Prot
Pfam ArgoL1 UniProtKB/Swiss-Prot
  ArgoL2 UniProtKB/Swiss-Prot
  ArgoMid UniProtKB/Swiss-Prot
  ArgoN UniProtKB/Swiss-Prot
  PAZ UniProtKB/Swiss-Prot
  Piwi UniProtKB/Swiss-Prot
PharmGKB PA27693 PharmGKB
PROSITE PAZ UniProtKB/Swiss-Prot
  PIWI UniProtKB/Swiss-Prot
SMART DUF1785 UniProtKB/Swiss-Prot
  PAZ UniProtKB/Swiss-Prot
  Piwi UniProtKB/Swiss-Prot
Superfamily-SCOP SSF101690 UniProtKB/Swiss-Prot
  SSF53098 UniProtKB/Swiss-Prot
1 to 40 of 55 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-02-19 AGO1  argonaute RISC component 1  AGO1  argonaute RISC catalytic component 1  Symbol and/or name change 5135510 APPROVED
2018-11-29 AGO1  argonaute RISC catalytic component 1  AGO1  argonaute 1, RISC catalytic component  Symbol and/or name change 5135510 APPROVED
2015-12-01 AGO1  argonaute 1, RISC catalytic component  AGO1  argonaute RISC catalytic component 1  Symbol and/or name change 5135510 APPROVED
2013-02-20 AGO1  argonaute RISC catalytic component 1  EIF2C1  eukaryotic translation initiation factor 2C, 1  Symbol and/or name change 5135510 APPROVED