AGO1 (argonaute RISC component 1) - Rat Genome Database

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Gene: AGO1 (argonaute RISC component 1) Sus scrofa
Analyze
Symbol: AGO1 (Ensembl: AGO3)
Name: argonaute RISC component 1
RGD ID: 14144693
Description: ENCODES a protein that exhibits core promoter sequence-specific DNA binding (ortholog); double-stranded RNA binding (ortholog); RNA endonuclease activity (ortholog); INVOLVED IN miRNA processing (ortholog); miRNA-mediated gene silencing by mRNA destabilization (ortholog); negative regulation of angiogenesis (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH alcohol dependence (ortholog); Charcot-Marie-Tooth disease dominant intermediate C (ortholog); genetic disease (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); cytosol (ortholog); RISC-loading complex (ortholog)
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: argonaute 1, RISC catalytic component; argonaute RISC catalytic component 1; EIF2C1; eukaryotic translation initiation factor 2C, 1; protein argonaute-1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl691,984,303 - 92,215,149 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1692,038,104 - 92,076,477 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2685,325,648 - 85,365,454 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
AGO1Pigalcohol dependence susceptibilityISORGD:13121639068941DNA:SNP:intron:A>G(rs595961)(human)RGDPMID:25495208|REF_RGD_ID:401900681
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
AGO1PigCharcot-Marie-Tooth disease dominant intermediate C  ISORGD:13121638554872ClinVar Annotator: match by term: Charcot-Marie-Tooth disease dominant intermediate CClinVarPMID:28492532
AGO1Piggenetic disease  ISORGD:13121638554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:23809764|PMID:25356899|PMID:25741868|PMID:30213762|PMID:34930816
AGO1Pigintellectual disability  ISORGD:13121638554872ClinVar Annotator: match by term: Intellectual disabilityClinVarPMID:25356899|PMID:25741868|PMID:27620904|PMID:28492532|PMID:30213762|PMID:34930816
AGO1PigNEURODEVELOPMENTAL DISORDER WITH LANGUAGE DELAY AND BEHAVIORAL ABNORMALITIES, WITH OR WITHOUT SEIZURES  ISORGD:13121638554872ClinVar Annotator: match by term: AGO1-related condition | ClinVar Annotator: match by term: Neurodevelopmental disorder more ...ClinVarPMID:23020937|PMID:25356899|PMID:25741868|PMID:27620904|PMID:28492532|PMID:30213762|PMID:34930816
AGO1PigNeurodevelopmental Disorders  ISORGD:13121638554872ClinVar Annotator: match by term: Neurodevelopmental abnormality | ClinVar Annotator: match by term: Neurodevelopmental disorderClinVarPMID:23020937|PMID:25741868|PMID:30213762|PMID:34930816
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
AGO1Pigmalignant mesothelioma  ISORGD:13121639068941CTD Direct Evidence: marker/mechanismCTDPMID:25756049
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
AGO1PigNEURODEVELOPMENTAL DISORDER WITH LANGUAGE DELAY AND BEHAVIORAL ABNORMALITIES, WITH OR WITHOUT SEIZURES  ISORGD:13121637240710 OMIM 


Biological Process
1 to 14 of 14 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
AGO1PigmiRNA processing involved_inISORGD:13121639068941 PMID:22795694BHF-UCLPMID:22795694
AGO1PigmiRNA-mediated gene silencing by inhibition of translation involved_inIEAUniRule:UR000107558150520179 UniProtGO_REF:0000104
AGO1PigmiRNA-mediated gene silencing by mRNA destabilization NOT|involved_inISORGD:13121639068941 PMID:15260970BHF-UCLPMID:15260970
AGO1Pignegative regulation of angiogenesis involved_inISORGD:13121639068941 PMID:23426184BHF-UCLPMID:23426184
AGO1Pignuclear-transcribed mRNA catabolic process involved_inISORGD:13121639068941 PMID:18771919UniProtPMID:18771919
AGO1Pigpositive regulation of transcription by RNA polymerase II involved_inISORGD:13121639068941 PMID:25336585BHF-UCLPMID:25336585
AGO1Pigpre-miRNA processing involved_inIBAMGI:2446632|PANTHER:PTN000527278|UniProtKB:A0A8M3AKD0|UniProtKB:Q9H9G7|UniProtKB:Q9HCK5|UniProtKB:Q9UKV8|UniProtKB:Q9UL18150520179 GO_CentralGO_REF:0000033
AGO1Pigregulation of stem cell proliferation involved_inIEAInterPro:IPR028603150520179 InterProGO_REF:0000002
AGO1Pigregulation of translation involved_inIEAUniProtKB-KW:KW-0810150520179 UniProtGO_REF:0000043
AGO1Pigregulatory ncRNA-mediated gene silencing involved_inIEAInterPro:IPR028603150520179 InterProGO_REF:0000002
AGO1Pigregulatory ncRNA-mediated gene silencing involved_inIEAUniProtKB-KW:KW-0943150520179 UniProtGO_REF:0000043
AGO1Pigregulatory ncRNA-mediated post-transcriptional gene silencing involved_inIBAFB:FBgn0087035|FB:FBgn0262739|MGI:2446632|PANTHER:PTN001113179|UniProtKB:Q9H9G7|UniProtKB:Q9HCK5|UniProtKB:Q9UKV8|UniProtKB:Q9UL18|WB:WBGene00000105|WB:WBGene00000106|WB:WBGene00004323|WB:WBGene00007624|WB:WBGene00017641|WB:WBGene00019862|WB:WBGene00019971150520179 GO_CentralGO_REF:0000033
AGO1PigRISC complex assembly involved_inISORGD:13121639068941 PMID:19966796BHF-UCLPMID:19966796
AGO1PigsiRNA-mediated gene silencing by mRNA destabilization NOT|involved_inISORGD:13121639068941 PMID:15260970BHF-UCLPMID:15260970
1 to 14 of 14 rows

Cellular Component
1 to 12 of 12 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
AGO1Pigcytoplasm is_active_inIBAFB:FBgn0087035|FB:FBgn0262739|MGI:1924100|MGI:2446630|MGI:2446632|PANTHER:PTN000527275|RGD:621255|TAIR:locus:2007111|TAIR:locus:2007760|TAIR:locus:2057851|TAIR:locus:2170897|TAIR:locus:2179008|TAIR:locus:2197545|UniProtKB:Q69VD5|UniProtKB:Q9H9G7|UniProtKB:Q9HCK5|UniProtKB:Q9UKV8|UniProtKB:Q9UL18|WB:WBGene00000105|WB:WBGene00000106|WB:WBGene00011061|WB:WBGene00011910|WB:WBGene00011945|WB:WBGene00017641|WB:WBGene00019971150520179 GO_CentralGO_REF:0000033
AGO1Pigcytoplasm located_inIEAUniProtKB-KW:KW-0963150520179 UniProtGO_REF:0000043
AGO1Pigcytoplasmic ribonucleoprotein granule is_active_inIBAFB:FBgn0087035|FB:FBgn0262739|MGI:1924100|MGI:2446630|MGI:2446632|PANTHER:PTN001113179|RGD:621255|UniProtKB:Q9H9G7|UniProtKB:Q9HCK5|UniProtKB:Q9UKV8|UniProtKB:Q9UL18|WB:WBGene00000105|WB:WBGene00011061|WB:WBGene00011910|WB:WBGene00011945|WB:WBGene00017641150520179 GO_CentralGO_REF:0000033
AGO1Pigcytoplasmic ribonucleoprotein granule located_inISORGD:13121639068941 HPAGO_REF:0000052
AGO1Pigcytosol located_inISORGD:13121639068941 HPAGO_REF:0000052
AGO1Pignucleus is_active_inIBAFB:FBgn0004872|FB:FBgn0087035|FB:FBgn0262739|MGI:1924100|MGI:1928897|MGI:1930036|MGI:2446630|MGI:2446632|MGI:2446634|MGI:3041167|PANTHER:PTN001875625|PomBase:SPCC736.11|TAIR:locus:2007760|TAIR:locus:2059258|TAIR:locus:2059370|TAIR:locus:2179008|TAIR:locus:2197545|UniProtKB:Q7Z3Z3|UniProtKB:Q7Z3Z4|UniProtKB:Q851R2|UniProtKB:Q8TC59|UniProtKB:Q9H9G7|UniProtKB:Q9UKV8|WB:WBGene00007624|WB:WBGene00017641|WB:WBGene00019862|ZFIN:ZDB-GENE-060526-345|dictyBase:DDB_G0276299|dictyBase:DDB_G0290377150520179 GO_CentralGO_REF:0000033
AGO1PigP-body located_inIEAUniProtKB-SubCell:SL-0230150520179 UniProtGO_REF:0000044
AGO1Pigribonucleoprotein complex part_ofIEAUniProtKB-KW:KW-0687150520179 UniProtGO_REF:0000043
AGO1PigRISC complex part_ofIBAFB:FBgn0087035|FB:FBgn0262739|MGI:1924100|MGI:2446630|MGI:2446632|MGI:2446634|PANTHER:PTN001113179|RGD:621255|UniProtKB:Q9H9G7|UniProtKB:Q9HCK5|UniProtKB:Q9UKV8|UniProtKB:Q9UL18|WB:WBGene00000105|WB:WBGene00000106|WB:WBGene00004323150520179 GO_CentralGO_REF:0000033
AGO1PigRISC complex part_ofIEAUniRule:UR000107558150520179 UniProtGO_REF:0000104
AGO1PigRISC complex part_ofIEAARBA:ARBA00044873150520179 UniProtGO_REF:0000117
AGO1PigRISC-loading complex part_ofISORGD:13121639068941 PMID:19966796BHF-UCLPMID:19966796
1 to 12 of 12 rows

Molecular Function
1 to 20 of 33 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
AGO1Pigcore promoter sequence-specific DNA binding enablesISORGD:13121639068941 PMID:25336585BHF-UCLPMID:25336585
AGO1Pigdouble-stranded RNA binding enablesISORGD:13121639068941 PMID:19966796BHF-UCLPMID:19966796
AGO1Pigendonuclease activity enablesIEAUniProtKB-KW:KW-0255150520179 UniProtGO_REF:0000043
AGO1PigmiRNA binding enablesIEAUniRule:UR000107558150520179 UniProtGO_REF:0000104
AGO1PigmiRNA binding enablesIBAFB:FBgn0262739|MGI:2446630|MGI:2446632|PANTHER:PTN001113179|UniProtKB:A0A8M3AKD0|UniProtKB:Q9H9G7|UniProtKB:Q9HCK5|UniProtKB:Q9UKV8|UniProtKB:Q9UL18|WB:WBGene00000105|WB:WBGene00000106150520179 GO_CentralGO_REF:0000033
AGO1Pignuclease activity enablesIEAUniProtKB-KW:KW-0540150520179 UniProtGO_REF:0000043
AGO1Pignucleic acid binding enablesIEAInterPro:IPR003165|InterPro:IPR036397150520179 InterProGO_REF:0000002
AGO1Pigprotein binding enablesISOUniProtKB:P08238|UniProtKB:Q8NDV7|UniProtKB:Q9UKV8|UniProtKB:Q9UPY39068941 PMID:33961781IntActPMID:33961781
AGO1Pigprotein binding enablesISOUniProtKB:Q66GS99068941 PMID:35709258IntActPMID:35709258
AGO1Pigprotein binding enablesISOUniProtKB:Q8NDV7|UniProtKB:Q9UPY39068941 PMID:19716330IntActPMID:19716330
AGO1Pigprotein binding enablesISOUniProtKB:P041569068941 PMID:18482256IntActPMID:18482256
AGO1Pigprotein binding enablesISOUniProtKB:Q9UGP49068941 PMID:28683311IntActPMID:28683311
AGO1Pigprotein binding enablesISOUniProtKB:P04156|UniProtKB:Q8NDV79068941 PMID:22484317IntActPMID:22484317
AGO1Pigprotein binding enablesISOUniProtKB:P082389068941 PMID:25036637IntActPMID:25036637
AGO1Pigprotein binding enablesISOUniProtKB:P08238|UniProtKB:Q9UPY39068941 PMID:17932509IntActPMID:17932509
AGO1Pigprotein binding enablesISOUniProtKB:Q8NDV79068941 PMID:19324964IntActPMID:19324964
AGO1Pigprotein binding enablesISOUniProtKB:Q9UPY39068941 PMID:12526743IntActPMID:12526743
AGO1Pigprotein binding enablesISOUniProtKB:P11940|UniProtKB:P17844|UniProtKB:P43243|UniProtKB:P52597|UniProtKB:P67809|UniProtKB:Q12906|UniProtKB:Q15020|UniProtKB:Q15717|UniProtKB:Q16531|UniProtKB:Q7L2E3|UniProtKB:Q92900|UniProtKB:Q9H0S4|UniProtKB:Q9H2U1|UniProtKB:Q9NZI89068941 PMID:17932509UniProtPMID:17932509
AGO1Pigprotein binding enablesISOUniProtKB:Q9UPQ9-29068941 PMID:17891150IntActPMID:17891150
AGO1Pigprotein binding enablesISOUniProtKB:A6NIX2|UniProtKB:Q96IF1|UniProtKB:Q9UGP49068941 PMID:20616046UniProtPMID:20616046
1 to 20 of 33 rows

RGD Manual Annotations


  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
AGO1PigmicroRNA pathway   ISORGD:13121639068941 RGDPMID:20484662|REF_RGD_ID:4144862
PMID:14681463   PMID:17145712   PMID:20454920   PMID:22301074  



AGO1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl691,984,303 - 92,215,149 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1692,038,104 - 92,076,477 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2685,325,648 - 85,365,454 (+)NCBISscrofa10.2Sscrofa10.2susScr3
AGO1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38135,869,761 - 35,930,532 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl135,869,808 - 35,930,532 (+)EnsemblGRCh38hg38GRCh38
GRCh37136,335,362 - 36,396,133 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36136,121,397 - 36,162,486 (+)NCBINCBI36Build 36hg18NCBI36
Build 34136,017,902 - 36,058,992NCBI
Celera134,623,239 - 34,664,327 (+)NCBICelera
Cytogenetic Map1p34.3NCBI
HuRef134,466,263 - 34,506,900 (+)NCBIHuRef
CHM1_1136,465,187 - 36,506,280 (+)NCBICHM1_1
T2T-CHM13v2.0135,732,654 - 35,793,426 (+)NCBIT2T-CHM13v2.0
Ago1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394126,328,805 - 126,362,500 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4126,328,805 - 126,362,376 (-)EnsemblGRCm39 Ensembl
GRCm384126,435,012 - 126,468,707 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4126,435,012 - 126,468,583 (-)EnsemblGRCm38mm10GRCm38
MGSCv374126,112,256 - 126,145,665 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364125,941,807 - 125,970,725 (-)NCBIMGSCv36mm8
Celera4124,771,815 - 124,805,219 (-)NCBICelera
Cytogenetic Map4D2.2NCBI
cM Map460.76NCBI
Ago1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85144,006,618 - 144,064,740 (-)NCBIGRCr8
mRatBN7.25138,722,111 - 138,757,118 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5138,722,111 - 138,773,546 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5141,419,895 - 141,454,732 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05143,189,892 - 143,224,724 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05143,190,669 - 143,225,508 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05144,444,390 - 144,479,430 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5144,448,792 - 144,479,306 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05148,214,328 - 148,246,407 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45145,797,436 - 145,829,516 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15145,806,727 - 145,840,972 (-)NCBI
Celera5137,218,551 - 137,248,255 (-)NCBICelera
Cytogenetic Map5q36NCBI
Ago1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545213,934,346 - 13,968,624 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495545213,935,028 - 13,967,281 (+)NCBIChiLan1.0ChiLan1.0
AGO1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21190,922,849 - 190,963,905 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11190,038,742 - 190,085,087 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0135,148,984 - 35,196,252 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1136,324,733 - 36,370,798 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl136,324,733 - 36,360,832 (+)Ensemblpanpan1.1panPan2
AGO1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1156,258,359 - 6,294,911 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl156,263,882 - 6,295,338 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha156,501,590 - 6,538,192 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0156,394,522 - 6,431,156 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl156,395,742 - 6,431,512 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1156,247,517 - 6,284,126 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0156,321,049 - 6,352,856 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0156,330,625 - 6,367,229 (-)NCBIUU_Cfam_GSD_1.0
LOC103225124
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12096,929,985 - 96,971,074 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2096,934,659 - 96,971,014 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603319,754,613 - 19,801,453 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ago1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476418,904,639 - 18,940,594 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476418,904,607 - 18,940,594 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in AGO1
497 total Variants






Ensembl Acc Id: ENSSSCT00000004026   ⟹   ENSSSCP00000003935
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl692,037,519 - 92,076,468 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000004027   ⟹   ENSSSCP00000003936
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl692,038,017 - 92,215,149 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000030097   ⟹   ENSSSCP00000019410
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl692,102,226 - 92,215,149 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000038526   ⟹   ENSSSCP00000057743
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl692,042,817 - 92,076,468 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000056463   ⟹   ENSSSCP00000055926
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl692,042,388 - 92,076,468 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000064566   ⟹   ENSSSCP00000034205
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl692,042,399 - 92,215,149 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000066730   ⟹   ENSSSCP00000062649
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl692,043,182 - 92,076,468 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000080755   ⟹   ENSSSCP00000073605
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl692,042,627 - 92,076,468 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000083850   ⟹   ENSSSCP00000064735
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl692,042,962 - 92,076,468 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000093277   ⟹   ENSSSCP00000079147
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl691,984,303 - 92,076,468 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000097037   ⟹   ENSSSCP00000075585
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl692,042,728 - 92,076,468 (+)Ensembl
RefSeq Acc Id: NM_001194976   ⟹   NP_001181905
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1692,038,216 - 92,070,538 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005665209   ⟹   XP_005665266
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1692,038,104 - 92,076,477 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021093293   ⟹   XP_020948952
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1692,047,270 - 92,076,477 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001309295
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1692,038,104 - 92,069,663 (+)NCBI
Sequence:
1 to 30 of 72 rows
Protein RefSeqs NP_001181905 (Get FASTA)   NCBI Sequence Viewer  
  XP_005665266 (Get FASTA)   NCBI Sequence Viewer  
  XP_020948952 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein ADH59735 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00000003935
  ENSSSCP00000003935.3
  ENSSSCP00000003936.5
  ENSSSCP00000034205.3
  ENSSSCP00000055926.2
  ENSSSCP00000057743.2
  ENSSSCP00000062649.2
  ENSSSCP00000064735.1
  ENSSSCP00000073605.1
  ENSSSCP00000075585.1
  ENSSSCP00000079147.1
  ENSSSCP00015008504.1
  ENSSSCP00015010341.1
  ENSSSCP00015010463.1
  ENSSSCP00015010512.1
  ENSSSCP00015010862.1
  ENSSSCP00015010953.1
  ENSSSCP00015010993.1
  ENSSSCP00015011134.1
  ENSSSCP00025018732.1
  ENSSSCP00025018893.1
  ENSSSCP00025019005.1
  ENSSSCP00025019155.1
  ENSSSCP00025019213.1
  ENSSSCP00025019338.1
  ENSSSCP00025019410.1
1 to 30 of 72 rows
1 to 5 of 14 rows
1 to 5 of 14 rows
RefSeq Acc Id: XP_005665266   ⟸   XM_005665209
- Peptide Label: isoform X1
- UniProtKB: A0A8D1FXA8 (UniProtKB/TrEMBL),   A0A8D0RXU0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001181905   ⟸   NM_001194976
- UniProtKB: D9YJ44 (UniProtKB/TrEMBL),   A0A8D1FXA8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020948952   ⟸   XM_021093293
- Peptide Label: isoform X2
- UniProtKB: A0A8D0N0N1 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000034205   ⟸   ENSSSCT00000064566
Ensembl Acc Id: ENSSSCP00000064735   ⟸   ENSSSCT00000083850
PAZ   Piwi



1 to 40 of 135 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSSSCG00000003630 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015014799 UniProtKB/TrEMBL
  ENSSSCG00025031134 UniProtKB/TrEMBL
  ENSSSCG00030034015 UniProtKB/TrEMBL
  ENSSSCG00035027354 UniProtKB/TrEMBL
  ENSSSCG00040064481 UniProtKB/TrEMBL
  ENSSSCG00045007963 UniProtKB/TrEMBL
  ENSSSCG00050041152 UniProtKB/TrEMBL
  ENSSSCG00055023592 UniProtKB/TrEMBL
  ENSSSCG00060012822 UniProtKB/TrEMBL
  ENSSSCG00065005393 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000004026 ENTREZGENE
  ENSSSCT00000004026.5 UniProtKB/TrEMBL
  ENSSSCT00000004027.5 UniProtKB/TrEMBL
  ENSSSCT00000038526.2 UniProtKB/TrEMBL
  ENSSSCT00000056463.2 UniProtKB/TrEMBL
  ENSSSCT00000064566.3 UniProtKB/TrEMBL
  ENSSSCT00000066730.2 UniProtKB/TrEMBL
  ENSSSCT00000080755.1 UniProtKB/TrEMBL
  ENSSSCT00000083850.1 UniProtKB/TrEMBL
  ENSSSCT00000093277.1 UniProtKB/TrEMBL
  ENSSSCT00000097037.1 UniProtKB/TrEMBL
  ENSSSCT00015021652.1 UniProtKB/TrEMBL
  ENSSSCT00015026420.1 UniProtKB/TrEMBL
  ENSSSCT00015026735.1 UniProtKB/TrEMBL
  ENSSSCT00015026853.1 UniProtKB/TrEMBL
  ENSSSCT00015027728.1 UniProtKB/TrEMBL
  ENSSSCT00015027970.1 UniProtKB/TrEMBL
  ENSSSCT00015028085.1 UniProtKB/TrEMBL
  ENSSSCT00015028430.1 UniProtKB/TrEMBL
  ENSSSCT00025044038.1 UniProtKB/TrEMBL
  ENSSSCT00025044373.1 UniProtKB/TrEMBL
  ENSSSCT00025044625.1 UniProtKB/TrEMBL
  ENSSSCT00025044962.1 UniProtKB/TrEMBL
  ENSSSCT00025045095.1 UniProtKB/TrEMBL
  ENSSSCT00025045361.1 UniProtKB/TrEMBL
  ENSSSCT00025045534.1 UniProtKB/TrEMBL
  ENSSSCT00025045631.1 UniProtKB/TrEMBL
  ENSSSCT00025045799.1 UniProtKB/TrEMBL
  ENSSSCT00030048888.1 UniProtKB/TrEMBL
1 to 40 of 135 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-05-28 AGO1  argonaute RISC component 1  AGO1  argonaute RISC catalytic component 1  Symbol and/or name change 5135510 APPROVED