AGO1 (argonaute RISC component 1) - Rat Genome Database

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Gene: AGO1 (argonaute RISC component 1) Canis lupus familiaris
Analyze
Symbol: AGO1
Name: argonaute RISC component 1
RGD ID: 12328735
Description: ENCODES a protein that exhibits RNA endonuclease activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN miRNA metabolic process (ortholog); miRNA-mediated gene silencing by mRNA destabilization (ortholog); positive regulation of gene expression (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH alcohol dependence (ortholog); Charcot-Marie-Tooth disease dominant intermediate C (ortholog); genetic disease (ortholog); FOUND IN nucleus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: argonaute 1, RISC catalytic component; argonaute RISC catalytic component 1; EIF2C1; eukaryotic translation initiation factor 2C, 1; LOC475337
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1156,258,359 - 6,294,911 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl156,263,882 - 6,295,338 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha156,501,590 - 6,538,192 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0156,394,522 - 6,431,156 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl156,395,742 - 6,431,512 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1156,247,517 - 6,284,126 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0156,321,049 - 6,352,856 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0156,330,625 - 6,367,229 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
AGO1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1156,258,359 - 6,294,911 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl156,263,882 - 6,295,338 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha156,501,590 - 6,538,192 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0156,394,522 - 6,431,156 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl156,395,742 - 6,431,512 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1156,247,517 - 6,284,126 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0156,321,049 - 6,352,856 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0156,330,625 - 6,367,229 (-)NCBIUU_Cfam_GSD_1.0
AGO1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38135,869,761 - 35,930,532 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl135,869,808 - 35,930,532 (+)EnsemblGRCh38hg38GRCh38
GRCh37136,335,362 - 36,396,133 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36136,121,397 - 36,162,486 (+)NCBINCBI36Build 36hg18NCBI36
Build 34136,017,902 - 36,058,992NCBI
Celera134,623,239 - 34,664,327 (+)NCBICelera
Cytogenetic Map1p34.3NCBI
HuRef134,466,263 - 34,506,900 (+)NCBIHuRef
CHM1_1136,465,187 - 36,506,280 (+)NCBICHM1_1
T2T-CHM13v2.0135,732,654 - 35,793,426 (+)NCBIT2T-CHM13v2.0
Ago1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394126,328,805 - 126,362,500 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4126,328,805 - 126,362,376 (-)EnsemblGRCm39 Ensembl
GRCm384126,435,012 - 126,468,707 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4126,435,012 - 126,468,583 (-)EnsemblGRCm38mm10GRCm38
MGSCv374126,112,256 - 126,145,665 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364125,941,807 - 125,970,725 (-)NCBIMGSCv36mm8
Celera4124,771,815 - 124,805,219 (-)NCBICelera
Cytogenetic Map4D2.2NCBI
cM Map460.76NCBI
Ago1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85144,006,618 - 144,064,740 (-)NCBIGRCr8
mRatBN7.25138,722,111 - 138,757,118 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5138,722,111 - 138,773,546 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5141,419,895 - 141,454,732 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05143,189,892 - 143,224,724 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05143,190,669 - 143,225,508 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05144,444,390 - 144,479,430 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5144,448,792 - 144,479,306 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05148,214,328 - 148,246,407 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45145,797,436 - 145,829,516 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15145,806,727 - 145,840,972 (-)NCBI
Celera5137,218,551 - 137,248,255 (-)NCBICelera
Cytogenetic Map5q36NCBI
Ago1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545213,934,346 - 13,968,624 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495545213,935,028 - 13,967,281 (+)NCBIChiLan1.0ChiLan1.0
AGO1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21190,922,849 - 190,963,905 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11190,038,742 - 190,085,087 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0135,148,984 - 35,196,252 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1136,324,733 - 36,370,798 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl136,324,733 - 36,360,832 (+)Ensemblpanpan1.1panPan2
AGO1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12096,929,985 - 96,971,074 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2096,934,659 - 96,971,014 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603319,754,613 - 19,801,453 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ago1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476418,904,639 - 18,940,594 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476418,904,607 - 18,940,594 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in AGO1
169 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 11 11 9
Low 5 5 11 6 6 6 6 6 1 8 1 6
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_014119391 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022427851 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022427852 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022427853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038495568 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038495569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038495570 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038495571 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038557920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038557921 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038557922 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038557923 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038621793 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038621794 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038621795 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038621796 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038687560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038687561 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038687562 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038687563 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_532563 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002633369 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005336362 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005370173 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005404398 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005437904 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000160 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000372 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSCAFT00000005625   ⟹   ENSCAFP00000005209
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl156,263,882 - 6,295,338 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000061971   ⟹   ENSCAFP00000046546
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl156,263,882 - 6,295,338 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000093476   ⟹   ENSCAFP00000058540
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl156,263,882 - 6,295,338 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845055087   ⟹   ENSCAFP00845043317
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl156,395,742 - 6,431,512 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845055093   ⟹   ENSCAFP00845043323
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl156,400,291 - 6,431,512 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845055097   ⟹   ENSCAFP00845043326
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl156,400,334 - 6,431,142 (-)Ensembl
RefSeq Acc Id: XM_014119391   ⟹   XP_013974866
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1156,258,359 - 6,294,905 (-)NCBI
Dog10K_Boxer_Tasha156,501,590 - 6,538,192 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022427851   ⟹   XP_022283559
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1156,258,359 - 6,294,911 (-)NCBI
Dog10K_Boxer_Tasha156,501,590 - 6,538,192 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022427852   ⟹   XP_022283560
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1156,258,359 - 6,294,911 (-)NCBI
Dog10K_Boxer_Tasha156,501,590 - 6,538,191 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038495568   ⟹   XP_038351496
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1156,247,517 - 6,284,126 (-)NCBI
RefSeq Acc Id: XM_038495569   ⟹   XP_038351497
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1156,247,517 - 6,284,125 (-)NCBI
RefSeq Acc Id: XM_038495570   ⟹   XP_038351498
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1156,247,517 - 6,284,126 (-)NCBI
RefSeq Acc Id: XM_038495571   ⟹   XP_038351499
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1156,247,517 - 6,284,126 (-)NCBI
RefSeq Acc Id: XM_038557920   ⟹   XP_038413848
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0156,330,625 - 6,367,229 (-)NCBI
RefSeq Acc Id: XM_038557921   ⟹   XP_038413849
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0156,330,625 - 6,367,228 (-)NCBI
RefSeq Acc Id: XM_038557922   ⟹   XP_038413850
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0156,330,625 - 6,367,229 (-)NCBI
RefSeq Acc Id: XM_038557923   ⟹   XP_038413851
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0156,330,625 - 6,367,229 (-)NCBI
RefSeq Acc Id: XM_038621793   ⟹   XP_038477721
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0156,321,049 - 6,352,856 (-)NCBI
RefSeq Acc Id: XM_038621794   ⟹   XP_038477722
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0156,321,050 - 6,352,855 (-)NCBI
RefSeq Acc Id: XM_038621795   ⟹   XP_038477723
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0156,321,049 - 6,352,856 (-)NCBI
RefSeq Acc Id: XM_038621796   ⟹   XP_038477724
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0156,321,049 - 6,352,856 (-)NCBI
RefSeq Acc Id: XM_038687560   ⟹   XP_038543488
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0156,394,522 - 6,431,156 (-)NCBI
RefSeq Acc Id: XM_038687561   ⟹   XP_038543489
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0156,394,522 - 6,431,155 (-)NCBI
RefSeq Acc Id: XM_038687562   ⟹   XP_038543490
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0156,394,522 - 6,431,156 (-)NCBI
RefSeq Acc Id: XM_038687563   ⟹   XP_038543491
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0156,394,522 - 6,431,156 (-)NCBI
RefSeq Acc Id: XM_532563   ⟹   XP_532563
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1156,258,359 - 6,294,905 (-)NCBI
Dog10K_Boxer_Tasha156,501,590 - 6,538,192 (-)NCBI
Sequence:
RefSeq Acc Id: XR_002633369
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1156,258,359 - 6,294,911 (-)NCBI
Dog10K_Boxer_Tasha156,501,590 - 6,538,192 (-)NCBI
Sequence:
RefSeq Acc Id: XR_005336362
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1156,247,517 - 6,284,126 (-)NCBI
RefSeq Acc Id: XR_005370173
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0156,330,625 - 6,367,229 (-)NCBI
RefSeq Acc Id: XR_005404398
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0156,321,049 - 6,352,856 (-)NCBI
RefSeq Acc Id: XR_005437904
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0156,394,522 - 6,431,156 (-)NCBI
RefSeq Acc Id: XP_532563   ⟸   XM_532563
- Peptide Label: isoform X4
- UniProtKB: A0A8C0QY26 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013974866   ⟸   XM_014119391
- Peptide Label: isoform X3
- UniProtKB: A0A8C0QY26 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022283560   ⟸   XM_022427852
- Peptide Label: isoform X2
- UniProtKB: A0A8C0K8V9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022283559   ⟸   XM_022427851
- Peptide Label: isoform X1
- UniProtKB: A0A8C0K8V9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000005209   ⟸   ENSCAFT00000005625
RefSeq Acc Id: ENSCAFP00000058540   ⟸   ENSCAFT00000093476
RefSeq Acc Id: ENSCAFP00000046546   ⟸   ENSCAFT00000061971
RefSeq Acc Id: XP_038351499   ⟸   XM_038495571
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038351498   ⟸   XM_038495570
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038351496   ⟸   XM_038495568
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038351497   ⟸   XM_038495569
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038477724   ⟸   XM_038621796
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038477723   ⟸   XM_038621795
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038477721   ⟸   XM_038621793
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038477722   ⟸   XM_038621794
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038543491   ⟸   XM_038687563
- Peptide Label: isoform X4
- UniProtKB: A0A8C0QY26 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038543490   ⟸   XM_038687562
- Peptide Label: isoform X3
- UniProtKB: A0A8C0QY26 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038543488   ⟸   XM_038687560
- Peptide Label: isoform X1
- UniProtKB: A0A8C0K8V9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038543489   ⟸   XM_038687561
- Peptide Label: isoform X2
- UniProtKB: A0A8C0K8V9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038413851   ⟸   XM_038557923
- Peptide Label: isoform X4
- UniProtKB: A0A8C0QY26 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038413850   ⟸   XM_038557922
- Peptide Label: isoform X3
- UniProtKB: A0A8C0QY26 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038413848   ⟸   XM_038557920
- Peptide Label: isoform X1
- UniProtKB: A0A8C0K8V9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038413849   ⟸   XM_038557921
- Peptide Label: isoform X2
- UniProtKB: A0A8C0K8V9 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845043317   ⟸   ENSCAFT00845055087
RefSeq Acc Id: ENSCAFP00845043326   ⟸   ENSCAFT00845055097
RefSeq Acc Id: ENSCAFP00845043323   ⟸   ENSCAFT00845055093
Protein Domains
PAZ   Piwi

Promoters
RGD ID:13685871
Promoter ID:EPDNEW_C3938
Type:initiation region
Name:AGO1_1
Description:argonaute 1, RISC catalytic component
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1156,295,008 - 6,295,068EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000003443 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030017792 UniProtKB/TrEMBL
  ENSCAFG00040007398 UniProtKB/TrEMBL
  ENSCAFG00845030992 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000005625.5 UniProtKB/TrEMBL
  ENSCAFT00000061971.2 UniProtKB/TrEMBL
  ENSCAFT00000093476.2 UniProtKB/TrEMBL
  ENSCAFT00030032844.1 UniProtKB/TrEMBL
  ENSCAFT00030032997.1 UniProtKB/TrEMBL
  ENSCAFT00040013776.1 UniProtKB/TrEMBL
  ENSCAFT00040013856.1 UniProtKB/TrEMBL
  ENSCAFT00845055087 ENTREZGENE
  ENSCAFT00845055087.1 UniProtKB/TrEMBL
  ENSCAFT00845055093.1 UniProtKB/TrEMBL
  ENSCAFT00845055097.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.420.10 UniProtKB/TrEMBL
  3.40.50.2300 UniProtKB/TrEMBL
  paz domain UniProtKB/TrEMBL
InterPro ArgoL1 UniProtKB/TrEMBL
  ArgoL2 UniProtKB/TrEMBL
  Argonaute_Mid_dom UniProtKB/TrEMBL
  Argonaute_N UniProtKB/TrEMBL
  PAZ_dom UniProtKB/TrEMBL
  PAZ_dom_sf UniProtKB/TrEMBL
  Piwi UniProtKB/TrEMBL
  Piwi_ago-like UniProtKB/TrEMBL
  RNaseH-like_sf UniProtKB/TrEMBL
  RNaseH_sf UniProtKB/TrEMBL
NCBI Gene LOC475337 ENTREZGENE
PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C UniProtKB/TrEMBL
  PROTEIN ARGONAUTE-1 UniProtKB/TrEMBL
Pfam ArgoL1 UniProtKB/TrEMBL
  ArgoL2 UniProtKB/TrEMBL
  ArgoMid UniProtKB/TrEMBL
  ArgoN UniProtKB/TrEMBL
  PAZ UniProtKB/TrEMBL
  Piwi UniProtKB/TrEMBL
PROSITE PAZ UniProtKB/TrEMBL
  PIWI UniProtKB/TrEMBL
SMART DUF1785 UniProtKB/TrEMBL
  PAZ UniProtKB/TrEMBL
  Piwi UniProtKB/TrEMBL
Superfamily-SCOP SSF101690 UniProtKB/TrEMBL
  SSF53098 UniProtKB/TrEMBL
UniProt A0A8C0K8V9 ENTREZGENE
  A0A8C0NSF4_CANLF UniProtKB/TrEMBL
  A0A8C0QY26 ENTREZGENE
  A0A8C0RZU0_CANLF UniProtKB/TrEMBL
  A0A8I3Q611_CANLF UniProtKB/TrEMBL
  A0A8I3QBC2_CANLF UniProtKB/TrEMBL
  A0A8I3QZI2_CANLF UniProtKB/TrEMBL
  A0A8P0S988_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:54192 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-04-16 AGO1  argonaute RISC component 1    argonaute RISC catalytic component 1  Symbol and/or name change 5135510 APPROVED
2019-01-22 AGO1  argonaute RISC catalytic component 1    argonaute 1, RISC catalytic component  Symbol and/or name change 5135510 APPROVED
2018-04-17 AGO1  argonaute 1, RISC catalytic component  LOC475337  protein argonaute-1  Symbol and/or name change 5135510 APPROVED