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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum
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Accession:GO:0010880 term browser browse the term
Definition:Any process that modulates the rate, frequency or extent of release of sequestered calcium ion into cytosol by the sarcoplasmic reticulum, the process in which the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol occurs via calcium release channels.


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regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CALM1 calmodulin 1 IEA Ensembl GO_REF:0000107 NCBI chr 8:61,398,231...61,408,874
Ensembl chr 8:61,398,244...61,406,195
JBrowse link
G CALM2 calmodulin 2 IEA Ensembl GO_REF:0000107 NCBI chr10:49,299,698...49,314,533 JBrowse link
G CALM3 calmodulin 3 IEA Ensembl GO_REF:0000107 NCBI chr 1:109,284,729...109,294,491
Ensembl chr 1:109,286,155...109,294,391
JBrowse link
G CAMK2D calcium/calmodulin dependent protein kinase II delta ISO PMID:12676813 BHF-UCL PMID:12676813 RGD:10047271 NCBI chr32:33,223,093...33,525,783
Ensembl chr32:33,224,716...33,525,371
JBrowse link
G CASQ1 calsequestrin 1 ISO (MGI:MGI:2449410|PMID:12419813)
(MGI:MGI:3814667|PMID:17627988)
MGI PMID:12419813, PMID:17627988 MGI:MGI:2449410, MGI:MGI:3814667 NCBI chr38:22,012,060...22,020,430
Ensembl chr38:22,011,060...22,020,383
JBrowse link
G CASQ2 calsequestrin 2 IDA (PMID:15041652) BHF-UCL PMID:15041652 NCBI chr17:53,233,966...53,299,093
Ensembl chr17:53,224,438...53,299,708
JBrowse link
G CHD7 chromodomain helicase DNA binding protein 7 IEA Ensembl GO_REF:0000107 NCBI chr29:11,115,865...11,284,713
Ensembl chr29:11,156,340...11,283,627
JBrowse link
G CLIC2 chloride intracellular channel 2 IEA Ensembl GO_REF:0000107 NCBI chr  X:123,268,867...123,291,467
Ensembl chr  X:123,268,867...123,291,467
JBrowse link
G DHRS7C dehydrogenase/reductase 7C IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:34,224,699...34,239,847
Ensembl chr 5:34,224,700...34,239,798
JBrowse link
G DMD dystrophin ISO (MGI:MGI:4420848|PMID:20080623), (MGI:MGI:5487906|PMID:23263329) BHF-UCL PMID:20080623, PMID:23263329 MGI:MGI:4420848, MGI:MGI:5487906 NCBI chr  X:26,290,903...28,444,635
Ensembl chr  X:26,290,910...28,333,576
JBrowse link
G FKBP1B FKBP prolyl isomerase 1B ISO (PMID:20431056)
(MGI:MGI:3639647|PMID:16672364)
(MGI:MGI:3028710|PMID:14592808), (MGI:MGI:5007884|PMID:19578067)
BHF-UCL
MGI
PMID:14592808, PMID:16672364, PMID:19578067, PMID:20431056 MGI:MGI:3028710, MGI:MGI:3639647, MGI:MGI:5007884 NCBI chr17:18,534,295...18,544,973
Ensembl chr17:18,534,741...18,544,943
JBrowse link
G GSTO1 glutathione S-transferase omega 1 IEA Ensembl GO_REF:0000107 NCBI chr28:16,569,421...16,579,239
Ensembl chr28:16,569,066...16,619,880
JBrowse link
G HRC histidine rich calcium binding protein IEA Ensembl GO_REF:0000107 NCBI chr 1:107,304,718...107,308,741
Ensembl chr 1:107,304,924...107,308,740
JBrowse link
G METTL21C methyltransferase like 21C IEA Ensembl GO_REF:0000107 NCBI chr22:52,181,222...52,194,859
Ensembl chr22:52,182,115...52,190,163
JBrowse link
G PDE4D phosphodiesterase 4D IEA Ensembl GO_REF:0000107 NCBI chr 2:45,843,767...47,245,263
Ensembl chr 2:45,846,294...46,949,912
JBrowse link
G PLN phospholamban ISO (MGI:MGI:3655341|PMID:9118481) MGI PMID:9118481 MGI:MGI:3655341 NCBI chr 1:58,579,095...58,590,541
Ensembl chr 1:58,579,145...58,590,535
JBrowse link
G TRDN triadin IDA
IBA
(PMID:15041652)
(PMID:21873635)
BHF-UCL
GO_Central
PMID:15041652, PMID:21873635 NCBI chr 1:62,402,763...62,762,717
Ensembl chr 1:62,402,642...62,762,722
JBrowse link
regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANK2 ankyrin 2 IEA Ensembl GO_REF:0000107 NCBI chr32:32,484,196...33,143,295
Ensembl chr32:32,671,281...33,141,036
JBrowse link
G ASPH aspartate beta-hydroxylase IDA (PMID:17400717) BHF-UCL PMID:17400717 NCBI chr29:11,812,275...12,022,755
Ensembl chr29:11,814,554...12,022,680
JBrowse link
G CASQ2 calsequestrin 2 IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr17:53,233,966...53,299,093
Ensembl chr17:53,224,438...53,299,708
JBrowse link
G DMD dystrophin IEA Ensembl GO_REF:0000107 NCBI chr  X:26,290,903...28,444,635
Ensembl chr  X:26,290,910...28,333,576
JBrowse link
G FKBP1B FKBP prolyl isomerase 1B IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:18,534,295...18,544,973
Ensembl chr17:18,534,741...18,544,943
JBrowse link
G PLN phospholamban IEA Ensembl GO_REF:0000107 NCBI chr 1:58,579,095...58,590,541
Ensembl chr 1:58,579,145...58,590,535
JBrowse link
G RYR2 ryanodine receptor 2 IEA Ensembl GO_REF:0000107 NCBI chr 4:2,371,868...2,908,132
Ensembl chr 4:2,373,114...2,907,875
JBrowse link
G SLC8A1 solute carrier family 8 member A1 ISO PMID:21779914 BHF-UCL PMID:21779914 RGD:8554732 NCBI chr17:32,004,207...32,381,399
Ensembl chr17:32,005,245...32,307,700
JBrowse link
G TMEM38A transmembrane protein 38A IEA Ensembl GO_REF:0000107 NCBI chr20:45,876,642...45,895,054
Ensembl chr20:45,877,524...45,894,986
JBrowse link
G TMEM38B transmembrane protein 38B IEA Ensembl GO_REF:0000107 NCBI chr11:61,511,756...61,561,987
Ensembl chr11:61,511,750...61,560,556
JBrowse link
regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASQ1 calsequestrin 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr38:22,012,060...22,020,430
Ensembl chr38:22,011,060...22,020,383
JBrowse link
G DMD dystrophin IEA Ensembl GO_REF:0000107 NCBI chr  X:26,290,903...28,444,635
Ensembl chr  X:26,290,910...28,333,576
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16187
    biological regulation 11555
      regulation of biological quality 4007
        regulation of calcium ion transport into cytosol 113
          regulation of release of sequestered calcium ion into cytosol 84
            regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum 23
              regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion 10
              regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion + 2
Path 2
Term Annotations click to browse term
  biological_process 16187
    biological regulation 11555
      regulation of biological quality 4007
        homeostatic process 1960
          chemical homeostasis 1249
            ion homeostasis 831
              cellular ion homeostasis 673
                cellular cation homeostasis 660
                  cellular metal ion homeostasis 594
                    cellular calcium ion homeostasis 484
                      regulation of cytosolic calcium ion concentration 384
                        positive regulation of cytosolic calcium ion concentration 335
                          calcium ion transport into cytosol 174
                            calcium ion transmembrane import into cytosol 150
                              release of sequestered calcium ion into cytosol 122
                                release of sequestered calcium ion into cytosol by endoplasmic reticulum 28
                                  release of sequestered calcium ion into cytosol by sarcoplasmic reticulum 27
                                    regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum 23
                                      regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion 10
                                      regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion + 2
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.