LOC119880472 (peptidyl-prolyl cis-trans isomerase FKBP1B)

Advanced Search (OLGA)

Gene: LOC119880472 (peptidyl-prolyl cis-trans isomerase FKBP1B) Canis lupus familiaris

Analyze

No known orthologs.

Symbol:

LOC119880472 (Ensembl: FKBP1B)

Name:

peptidyl-prolyl cis-trans isomerase FKBP1B (Ensembl:FKBP prolyl isomerase 1B)

RGD ID:

40911420

Description:

ENCODES a protein that exhibits calcium channel inhibitor activity (inferred); channel regulator activity (inferred); FK506 binding (inferred); INVOLVED IN calcium-mediated signaling (inferred); insulin secretion (inferred); insulin secretion involved in cellular response to glucose stimulus (inferred); FOUND IN calcium channel complex (inferred); cytoplasm (inferred); membrane (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

RGD Orthologs

Alliance Orthologs

More Info

homologs ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ROS_Cfam_1.0	17	18,704,709 - 18,715,350 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	17	18,705,120 - 18,715,320 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UNSW_CanFamBas_1.0	17	18,554,622 - 18,565,286 (+)	NCBI		UNSW_CanFamBas_1.0

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

calcium-mediated signaling (IEA)

insulin secretion (IEA)

insulin secretion involved in cellular response to glucose stimulus (IEA)

negative regulation of calcium-mediated signaling (IEA)

negative regulation of heart rate (IEA)

negative regulation of insulin secretion involved in cellular response to glucose stimulus (IEA)

negative regulation of release of sequestered calcium ion into cytosol (IEA)

neuronal action potential propagation (IEA)

positive regulation of cytosolic calcium ion concentration (IEA)

positive regulation of sequestering of calcium ion (IEA)

regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion (IEA)

regulation of heart rate (IEA)

regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum (IEA)

release of sequestered calcium ion into cytosol (IEA)

response to glucose (IEA)

response to redox state (IEA)

smooth muscle contraction (IEA)

T cell proliferation (IEA)

Cellular Component

calcium channel complex (IEA)

cytoplasm (IEA)

membrane (IEA)

sarcoplasmic reticulum (IEA)

sarcoplasmic reticulum membrane (IEA)

Z disc (IEA)

Molecular Function

calcium channel inhibitor activity (IEA)

channel regulator activity (IEA)

FK506 binding (IEA)

isomerase activity (IEA)

peptidyl-prolyl cis-trans isomerase activity (IEA)

signaling receptor binding (IEA)

transmembrane transporter binding (IEA)

References

Genomics

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_038624941	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038624942	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038624943	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038624944	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038624945	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038690833	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038690834	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038690835	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038690836	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038690837	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAAQRD010000035	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000359	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00845040000 ⟹ ENSCAFP00845031323

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	17	18,705,120 - 18,715,320 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845040044 ⟹ ENSCAFP00845031356

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	17	18,705,120 - 18,714,744 (+)	Ensembl

RefSeq Acc Id:

XM_038624941 ⟹ XP_038480869

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	17	18,555,065 - 18,565,286 (+)	NCBI

RefSeq Acc Id:

XM_038624942 ⟹ XP_038480870

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	17	18,554,732 - 18,565,286 (+)	NCBI

RefSeq Acc Id:

XM_038624943 ⟹ XP_038480871

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	17	18,555,062 - 18,565,286 (+)	NCBI

RefSeq Acc Id:

XM_038624944 ⟹ XP_038480872

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	17	18,555,059 - 18,564,773 (+)	NCBI

RefSeq Acc Id:

XM_038624945 ⟹ XP_038480873

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	17	18,554,622 - 18,565,286 (+)	NCBI

RefSeq Acc Id:

XM_038690833 ⟹ XP_038546761

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	17	18,705,117 - 18,715,350 (+)	NCBI

RefSeq Acc Id:

XM_038690834 ⟹ XP_038546762

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	17	18,704,787 - 18,715,350 (+)	NCBI

RefSeq Acc Id:

XM_038690835 ⟹ XP_038546763

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	17	18,705,113 - 18,715,350 (+)	NCBI

RefSeq Acc Id:

XM_038690836 ⟹ XP_038546764

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	17	18,705,111 - 18,714,837 (+)	NCBI

RefSeq Acc Id:

XM_038690837 ⟹ XP_038546765

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	17	18,704,709 - 18,715,350 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_038480869	(Get FASTA)	NCBI Sequence Viewer
	XP_038480870	(Get FASTA)	NCBI Sequence Viewer
	XP_038480871	(Get FASTA)	NCBI Sequence Viewer
	XP_038480872	(Get FASTA)	NCBI Sequence Viewer
	XP_038480873	(Get FASTA)	NCBI Sequence Viewer
	XP_038546761	(Get FASTA)	NCBI Sequence Viewer
	XP_038546762	(Get FASTA)	NCBI Sequence Viewer
	XP_038546763	(Get FASTA)	NCBI Sequence Viewer
	XP_038546764	(Get FASTA)	NCBI Sequence Viewer
	XP_038546765	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00845031323
	ENSCAFP00845031356

RefSeq Acc Id:	XP_038480873 ⟸ XM_038624945
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038480870 ⟸ XM_038624942
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038480872 ⟸ XM_038624944
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038480871 ⟸ XM_038624943
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038480869 ⟸ XM_038624941
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038546765 ⟸ XM_038690837
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038546762 ⟸ XM_038690834
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038546764 ⟸ XM_038690836
- Peptide Label:	isoform X4
- UniProtKB:	A0A8C0QGV0 (UniProtKB/TrEMBL), A0A8I3PGV2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038546763 ⟸ XM_038690835
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038546761 ⟸ XM_038690833
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0Q5S4 (UniProtKB/TrEMBL), A0A8C0LIQ8 (UniProtKB/TrEMBL), A0A8I3PCD4 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCAFP00845031323 ⟸ ENSCAFT00845040000

Ensembl Acc Id:

ENSCAFP00845031356 ⟸ ENSCAFT00845040044

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00845022652	Ensembl, ENTREZGENE
Ensembl Transcript	ENSCAFT00845040000	ENTREZGENE
	ENSCAFT00845040044	ENTREZGENE
NCBI Gene	LOC119880472	ENTREZGENE
UniProt	A0A8C0LIQ8	ENTREZGENE
	A0A8C0Q5S4	ENTREZGENE
	A0A8C0QGV0	ENTREZGENE
	A0A8I3PCD4	ENTREZGENE
	A0A8I3PGV2	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message