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ONTOLOGY REPORT - ANNOTATIONS

Term:respiratory system process
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Accession:GO:0003016 term browser browse the term
Definition:A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange.
Synonyms:exact_synonym: respiratory gaseous exchange
 alt_id: GO:0010802


show annotations for term's descendants           Sort by:
respiratory system process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADH5 alcohol dehydrogenase 5 (class III), chi polypeptide acts_upstream_of_or_within ISO (PMID:15919956) MGI PMID:15919956 NCBI chr 8:121,266,794...121,282,313
Ensembl chr 8:121,266,764...121,282,310 		JBrowse link
G AP3B1 adaptor related protein complex 3 subunit beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12777251) Ensembl
MGI		 PMID:12777251 GO_REF:0000107 NCBI chr 2:86,875,922...87,142,722
Ensembl chr 2:86,873,290...87,142,768 		JBrowse link
G BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19381131) Ensembl
MGI		 PMID:19381131 GO_REF:0000107 NCBI chr 1:126,168,944...126,184,813
Ensembl chr 1:126,165,994...126,184,858 		JBrowse link
G CCBE1 collagen and calcium binding EGF domains 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24733830) Ensembl
MGI		 PMID:24733830 GO_REF:0000107 NCBI chr 1:161,320,627...161,556,539
Ensembl chr 1:161,321,273...161,556,537 		JBrowse link
G ECEL1 endothelin converting enzyme like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:132,988,705...132,997,924
Ensembl chr15:132,988,657...132,997,825 		JBrowse link
G FKRP fukutin related protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29571322), (PMID:29625576), (PMID:30150693) Ensembl
MGI		 PMID:29571322 PMID:29625576 PMID:30150693 GO_REF:0000107 NCBI chr 6:52,627,466...52,639,255
Ensembl chr 6:52,627,471...52,639,253 		JBrowse link
G FLT4 fms related receptor tyrosine kinase 4 acts_upstream_of_or_within ISO (PMID:24733830) MGI PMID:24733830 NCBI chr 2:78,076,008...78,115,137
Ensembl chr 2:78,076,080...78,115,126 		JBrowse link
G HIPK2 homeodomain interacting protein kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:31582725) Ensembl
MGI		 PMID:31582725 GO_REF:0000107 NCBI chr18:9,940,535...10,141,815
Ensembl chr18:9,861,792...10,135,065 		JBrowse link
G HMGA1 high mobility group AT-hook 1 acts_upstream_of_or_within ISO (PMID:31582725) MGI PMID:31582725 NCBI chr 7:30,320,090...30,329,413
Ensembl chr 7:30,320,410...30,329,408 		JBrowse link
G HOXA5 homeobox A5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9441679) Ensembl
MGI		 PMID:9441679 GO_REF:0000107 NCBI chr18:45,429,691...45,432,723
Ensembl chr18:45,421,663...45,432,885 		JBrowse link
G HPS1 HPS1 biogenesis of lysosomal organelles complex 3 subunit 1 acts_upstream_of_or_within ISO (PMID:12777251) MGI PMID:12777251 NCBI chr14:109,730,597...109,755,288
Ensembl chr14:109,730,598...109,751,985 		JBrowse link
G JAG2 jagged canonical Notch ligand 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9531541) Ensembl
MGI		 PMID:9531541 GO_REF:0000107
G KDM6A lysine demethylase 6A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22949634) Ensembl
MGI		 PMID:22949634 GO_REF:0000107 NCBI chr  X:39,953,764...40,154,197
Ensembl chr  X:39,953,814...40,154,029 		JBrowse link
G LOC100623720 collagen alpha-1(VI) chain acts_upstream_of_or_within ISO (PMID:19114551) MGI PMID:19114551 NCBI chr13:208,295,245...208,321,789
Ensembl chr13:208,295,451...208,313,127 		JBrowse link
G NDN necdin, MAGE family member acts_upstream_of_or_within ISO (PMID:10508517) MGI PMID:10508517 NCBI chr 1:142,412,688...142,413,665
Ensembl chr 1:142,412,565...142,414,240 		JBrowse link
G NDUFS4 NADH:ubiquinone oxidoreductase subunit S4 acts_upstream_of_or_within ISO (PMID:28327638) MGI PMID:28327638 NCBI chr16:32,874,418...32,985,638
Ensembl chr16:32,874,450...32,987,828 		JBrowse link
G RAB3A RAB3A, member RAS oncogene family involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:11359932) AgBase
MGI
Ensembl		 PMID:11359932 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:59,603,090...59,609,773
Ensembl chr 2:59,603,117...59,609,767 		JBrowse link
G SELENON selenoprotein N involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23325319) Ensembl
MGI		 PMID:23325319 GO_REF:0000107 NCBI chr 6:83,246,934...83,262,748
Ensembl chr 6:83,246,934...83,262,743 		JBrowse link
G STK40 serine/threonine kinase 40 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23293024) Ensembl
MGI		 PMID:23293024 GO_REF:0000107 NCBI chr 6:92,441,231...92,484,363
Ensembl chr 6:92,441,233...92,484,336 		JBrowse link
G TCF15 transcription factor 15 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8955271) Ensembl
MGI		 PMID:8955271 GO_REF:0000107 NCBI chr17:34,626,682...34,632,881
Ensembl chr17:34,626,670...34,633,263 		JBrowse link
G YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta involved_in ISO (PMID:29118970) MGI PMID:29118970 NCBI chr 4:35,975,513...36,009,909
Ensembl chr 4:35,975,508...36,009,887 		JBrowse link
G ZFAND5 zinc finger AN1-type containing 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17143286) Ensembl
MGI		 PMID:17143286 GO_REF:0000107 NCBI chr 1:225,703,027...225,714,522
Ensembl chr 1:225,703,200...225,714,365 		JBrowse link
diaphragm contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRB2 adrenoceptor beta 2 ISO RGD PMID:17362795 RGD:4145100 NCBI chr 2:150,032,649...150,035,591
Ensembl chr 2:150,033,579...150,040,731 		JBrowse link
G GAA alpha glucosidase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15169761) Ensembl
MGI		 PMID:15169761 GO_REF:0000107 NCBI chr12:2,315,807...2,339,867
Ensembl chr12:2,314,591...2,336,988 		JBrowse link
G TNNC1 troponin C1, slow skeletal and cardiac type ISO RGD PMID:14985239 RGD:1598612 NCBI chr13:34,591,571...34,594,320
Ensembl chr13:34,591,386...34,594,337 		JBrowse link
mucociliary clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CFAP221 cilia and flagella associated protein 221 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18039845), (PMID:24360193)
(PMID:32704025)		 Ensembl
MGI		 PMID:18039845 PMID:24360193 PMID:32704025 GO_REF:0000107 NCBI chr15:31,585,043...31,685,867
Ensembl chr15:31,585,488...31,685,630 		JBrowse link
G CFAP43 cilia and flagella associated protein 43 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:31884020) Ensembl
MGI		 PMID:31884020 GO_REF:0000107 NCBI chr14:115,073,529...115,201,965
Ensembl chr14:115,073,366...115,174,043 		JBrowse link
G CFAP54 cilia and flagella associated protein 54 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:32704025) Ensembl
MGI		 PMID:32704025 GO_REF:0000107 NCBI chr 5:86,792,443...87,102,621
Ensembl chr 5:86,792,450...87,102,623 		JBrowse link
G DNAH9 dynein axonemal heavy chain 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:33347437) Ensembl
MGI		 PMID:33347437 GO_REF:0000107 NCBI chr12:56,045,079...56,366,327
Ensembl chr12:56,045,381...56,358,236 		JBrowse link
G NEK10 NIMA related kinase 10 involved_in ISO (PMID:31959991) UniProt PMID:31959991 NCBI chr13:13,751,178...13,931,896
Ensembl chr13:13,752,467...13,930,483 		JBrowse link
G ODAD4 outer dynein arm docking complex subunit 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:20,766,088...20,791,527
Ensembl chr12:20,766,884...20,791,476 		JBrowse link
G SPAG16 sperm associated antigen 16 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17323374) Ensembl
MGI		 PMID:17323374 GO_REF:0000107 NCBI chr15:115,809,152...116,760,976
Ensembl chr15:115,809,187...116,761,791 		JBrowse link
G SPEF2 sperm flagellar 2 acts_upstream_of_or_within ISO (PMID:32704025)
(PMID:24360193)		 MGI PMID:24360193 PMID:32704025 NCBI chr16:21,088,463...21,264,591
Ensembl chr16:21,088,386...21,265,592 		JBrowse link
G STARD7 StAR related lipid transfer domain containing 7 acts_upstream_of_or_within ISO (PMID:25980009) MGI PMID:25980009 NCBI chr 3:46,992,708...47,017,668
Ensembl chr 3:46,992,777...47,019,206 		JBrowse link
G TTLL1 TTL family tubulin polyglutamylase complex subunit L1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29440671) Ensembl
MGI		 PMID:29440671 GO_REF:0000107 NCBI chr 5:5,793,760...5,827,622
Ensembl chr 5:5,793,780...5,827,633 		JBrowse link
regulation of respiratory gaseous exchange by nervous system process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADORA1 adenosine A1 receptor ISO downregulates hypoxia-induced hyperventilation RGD PMID:16352472 RGD:1625230 NCBI chr 9:113,835,279...113,875,899
Ensembl chr 9:113,835,921...113,872,365 		JBrowse link
G ATP1A2 ATPase Na+/K+ transporting subunit alpha 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12458206)
(PMID:15564586)		 Ensembl
MGI		 PMID:12458206 PMID:15564586 GO_REF:0000107 NCBI chr 4:90,341,316...90,371,040
Ensembl chr 4:90,341,322...90,370,996 		JBrowse link
G CC2D1A coiled-coil and C2 domain containing 1A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26720614) Ensembl
MGI		 PMID:26720614 GO_REF:0000107 NCBI chr 2:65,235,757...65,252,481
Ensembl chr 2:65,235,758...65,252,506 		JBrowse link
G GLRA1 glycine receptor alpha 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16800867) Ensembl
MGI		 PMID:16800867 GO_REF:0000107 NCBI chr16:71,140,751...71,236,867
Ensembl chr16:71,142,198...71,230,344 		JBrowse link
G GLS glutaminase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16641247) Ensembl
MGI		 PMID:16641247 GO_REF:0000107 NCBI chr15:95,513,414...95,606,029
Ensembl chr15:95,513,446...95,598,311 		JBrowse link
G GSX2 GS homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9398437) Ensembl
MGI		 PMID:9398437 GO_REF:0000107 NCBI chr 8:40,880,093...40,883,928
Ensembl chr 8:40,881,552...40,883,995 		JBrowse link
G MECP2 methyl-CpG binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16354910)
(PMID:18321864)		 Ensembl
MGI		 PMID:16354910 PMID:18321864 GO_REF:0000107 NCBI chr  X:124,735,523...124,789,063
Ensembl chr  X:124,735,656...124,738,659 		JBrowse link
G NLGN1 neuroligin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16982420) Ensembl
MGI		 PMID:16982420 GO_REF:0000107 NCBI chr13:111,851,007...112,727,202
Ensembl chr13:112,035,854...112,725,618 		JBrowse link
G NLGN3 neuroligin 3 acts_upstream_of_or_within ISO (PMID:16982420) MGI PMID:16982420 NCBI chr  X:57,174,506...57,204,770
Ensembl chr  X:57,176,103...57,201,461 		JBrowse link
G PBX3 PBX homeobox 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15527896) Ensembl
MGI		 PMID:15527896 GO_REF:0000107 NCBI chr 1:266,383,311...266,610,646
Ensembl chr 1:266,382,640...266,610,640 		JBrowse link
G PHOX2B paired like homeobox 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:32,841,425...32,846,133
Ensembl chr 8:32,842,145...32,846,127 		JBrowse link
G TLX3 T cell leukemia homeobox 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15527896) Ensembl
MGI		 PMID:15527896 GO_REF:0000107 NCBI chr16:52,823,839...52,826,717
Ensembl chr16:52,823,657...52,826,804 		JBrowse link
G TSHZ3 teashirt zinc finger homeobox 3 involved_in ISO (MGI:4819308|PMID:20631175) UniProt PMID:20631175 MGI:4819308 NCBI chr 6:41,345,466...41,429,239
Ensembl chr 6:41,345,470...41,423,700 		JBrowse link
regulation of respiratory system process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FTO FTO alpha-ketoglutarate dependent dioxygenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:31,177,112...31,564,674
Ensembl chr 6:31,174,569...31,564,718 		JBrowse link
G MTG1 mitochondrial ribosome associated GTPase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:141,372,244...141,384,314
Ensembl chr14:141,372,246...141,384,315 		JBrowse link
G MTG2 mitochondrial ribosome associated GTPase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:61,598,216...61,614,699
Ensembl chr17:61,604,971...61,614,691 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17800
    multicellular organismal process 8697
      respiratory gaseous exchange by respiratory system 79
        respiratory system process 51
          diaphragm contraction 3
          mucociliary clearance 10
          regulation of respiratory system process + 16
paths to the root