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regulation of lysosome organization - Ontology Report - Rat Genome Database

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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of lysosome organization
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Accession:GO:1905671 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of lysosome organization.
Synonyms:exact_synonym: regulation of lysosome organisation
 related_synonym: regulation of lysosome organization and biogenesis


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show annotations for term's descendants           Sort by:
regulation of lysosome organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grn granulin acts_upstream_of_or_within IMP (PMID:28728022) MGI PMID:28728022 NCBI chr11:102,321,333...102,327,635
Ensembl chr11:102,321,141...102,327,874
JBrowse link
G Laptm4b lysosomal-associated protein transmembrane 4B involved_in ISS
ISO
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000119 NCBI chr15:34,238,279...34,284,448
Ensembl chr15:34,238,174...34,284,448
JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISS UniProt GO_REF:0000024 NCBI chr 4:148,533,039...148,642,142
Ensembl chr 4:148,533,068...148,642,140
JBrowse link
G Tfeb transcription factor EB involved_in ISO (PMID:22692423), (PMID:35662396) UniProt PMID:22692423 PMID:35662396 NCBI chr17:48,047,962...48,103,341
Ensembl chr17:48,047,955...48,103,344
JBrowse link
G Tmem106b transmembrane protein 106B acts_upstream_of_or_within IMP (PMID:28728022) MGI PMID:28728022 NCBI chr 6:13,069,758...13,089,268
Ensembl chr 6:13,069,758...13,089,268
JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within IMP (PMID:23160154) MGI PMID:23160154 NCBI chr 9:108,887,000...108,888,791
Ensembl chr 9:108,887,001...108,888,802
JBrowse link
negative regulation of lysosome organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Becn1 beclin 1, autophagy related involved_in ISO
IEA
RGD
GO_Central
Ensembl
PMID:25561470 GO_REF:0000096 GO_REF:0000107 RGD:11561937 NCBI chr11:101,179,084...101,193,112
Ensembl chr11:101,176,778...101,193,112
JBrowse link
G Flcn folliculin involved_in IEA
ISO
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 NCBI chr11:59,682,234...59,706,138
Ensembl chr11:59,682,234...59,700,842
JBrowse link
G Fnip1 folliculin interacting protein 1 involved_in ISS
ISO
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000119 NCBI chr11:54,328,071...54,409,067
Ensembl chr11:54,329,025...54,409,061
JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISO
ISS
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000119 NCBI chr 4:148,533,039...148,642,142
Ensembl chr 4:148,533,068...148,642,140
JBrowse link
positive regulation of lysosome organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grn granulin involved_in ISO
IDA
(PMID:28073925) GO_Central
UniProt
PMID:28073925 GO_REF:0000119 NCBI chr11:102,321,333...102,327,635
Ensembl chr11:102,321,141...102,327,874
JBrowse link
G Igtp interferon gamma induced GTPase involved_in ISO GO_Central GO_REF:0000119 NCBI chr11:58,090,382...58,098,418
Ensembl chr11:58,090,382...58,098,417
JBrowse link
G Irgm1 immunity-related GTPase family M member 1 involved_in ISO GO_Central GO_REF:0000119 NCBI chr11:48,756,072...48,762,247
Ensembl chr11:48,752,795...48,762,510
JBrowse link
G Irgm2 immunity-related GTPase family M member 2 involved_in ISO GO_Central GO_REF:0000119 NCBI chr11:58,105,803...58,113,609
Ensembl chr11:58,090,444...58,113,608
JBrowse link
G Mcoln1 mucolipin 1 involved_in ISS
ISO
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000119 NCBI chr 8:3,550,458...3,565,232
Ensembl chr 8:3,550,457...3,565,232
JBrowse link
G Ppp3cb protein phosphatase 3, catalytic subunit, beta isoform involved_in IEA
ISO
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 NCBI chr14:20,549,432...20,596,641
Ensembl chr14:20,549,432...20,596,641
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28636
    cellular process 18394
      regulation of cellular process 12633
        regulation of cellular component organization 2822
          regulation of organelle organization 1279
            regulation of vacuole organization 61
              regulation of lysosome organization 14
                negative regulation of lysosome organization 4
                positive regulation of lysosome organization 6
Path 2
Term Annotations click to browse term
  biological_process 28636
    cellular process 18394
      cellular component organization or biogenesis 7407
        cellular component organization 7211
          organelle organization 3739
            vacuole organization 245
              lytic vacuole organization 103
                lysosome organization 103
                  regulation of lysosome organization 14
                    negative regulation of lysosome organization 4
                    positive regulation of lysosome organization 6
paths to the root