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ONTOLOGY REPORT - ANNOTATIONS

Term:clathrin-coated endocytic vesicle
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Accession:GO:0045334 term browser browse the term
Definition:A clathrin-coated, membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance.
Synonyms:xref: NIF_Subcellular:sao1243595998


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clathrin-coated endocytic vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEMIP cell migration inducing hyaluronidase 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:56,726,605...56,786,176
Ensembl chr 3:56,726,493...56,876,026 		JBrowse link
G CLTC clathrin heavy chain is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 9:34,116,344...34,183,023
Ensembl chr 9:34,116,634...34,182,719 		JBrowse link
G CLTCL1 clathrin heavy chain like 1 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr26:29,907,235...30,002,136
Ensembl chr26:29,906,278...30,002,128 		JBrowse link
G CPNE2 copine 2 NOT|located_in ISO (PMID:21087455) UniProt PMID:21087455 NCBI chr 2:59,226,410...59,257,170
Ensembl chr 2:59,226,410...59,259,900 		JBrowse link
G CPNE6 copine 6 located_in ISO (PMID:21087455) UniProt PMID:21087455 NCBI chr 8:4,078,240...4,084,744
Ensembl chr 8:4,046,544...4,084,744 		JBrowse link
G CTLA4 cytotoxic T-lymphocyte associated protein 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr37:12,647,712...12,653,874
Ensembl chr37:12,634,563...12,653,874 		JBrowse link
G DNM2 dynamin 2 ISO RGD PMID:11925437 RGD:728683 NCBI chr20:50,398,866...50,487,303
Ensembl chr20:50,398,864...50,487,241 		JBrowse link
G INPP5F inositol polyphosphate-5-phosphatase F located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr28:29,878,489...29,945,598
Ensembl chr28:29,858,658...29,944,490 		JBrowse link
G LMBRD1 LMBR1 domain containing 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr12:32,274,056...32,383,737
Ensembl chr12:32,274,412...32,383,578 		JBrowse link
G MYO1E myosin IE located_in IEA Ensembl GO_REF:0000107 NCBI chr30:24,067,622...24,265,567
Ensembl chr30:24,068,283...24,265,311 		JBrowse link
G MYO6 myosin VI located_in IEA Ensembl GO_REF:0000107 NCBI chr12:37,359,200...37,502,342
Ensembl chr12:37,413,570...37,500,724 		JBrowse link
G NGFR nerve growth factor receptor ISO during receptor recycling in response to NGF binding RGD PMID:17897318 RGD:5508756 NCBI chr 9:25,598,468...25,621,021
Ensembl chr 9:25,601,074...25,623,274 		JBrowse link
G RAB35 RAB35, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chr26:16,061,872...16,078,489
Ensembl chr26:16,063,043...16,078,481 		JBrowse link
G SLC5A7 solute carrier family 5 member 7 ISO RGD PMID:15953352 RGD:9999386 NCBI chr10:35,879,880...35,908,203
Ensembl chr10:35,883,245...35,908,569 		JBrowse link
AP-2 adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AP2A1 adaptor related protein complex 2 subunit alpha 1 part_of IEA
IBA		 Ensembl
GO_Central
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr 1:106,752,326...106,784,803
Ensembl chr 1:106,751,800...106,784,663 		JBrowse link
G AP2A2 adaptor related protein complex 2 subunit alpha 2 part_of IEA
IBA		 InterPro
GO_Central
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr18:45,269,962...45,358,020
Ensembl chr18:45,253,772...45,358,018 		JBrowse link
G AP2B1 adaptor related protein complex 2 subunit beta 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr 9:37,946,761...38,078,074
Ensembl chr 9:37,946,788...38,078,041 		JBrowse link
G AP2M1 adaptor related protein complex 2 subunit mu 1 part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr34:17,071,199...17,080,445
Ensembl chr34:17,071,235...17,080,445 		JBrowse link
G AP2S1 adaptor related protein complex 2 subunit sigma 1 part_of ISO
IEA		 RGD
InterPro		 PMID:7593184 GO_REF:0000002 RGD:2306270 NCBI chr 1:109,094,098...109,105,233
Ensembl chr 1:109,082,221...109,105,230 		JBrowse link
G BTBD8 BTB domain containing 8 located_in ISO PMID:29262337 UniProt PMID:29262337 RGD:13601995 NCBI chr 6:56,756,682...56,849,849
Ensembl chr 6:56,698,320...56,900,173 		JBrowse link
G EPS15 epidermal growth factor receptor pathway substrate 15 part_of ISO (PMID:17626015) UniProt PMID:17626015 NCBI chr15:9,834,285...9,895,755
Ensembl chr15:9,787,260...9,893,540 		JBrowse link
G SGIP1 SH3GL interacting endocytic adaptor 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr 5:43,741,507...43,944,289
Ensembl chr 5:43,746,506...43,943,414 		JBrowse link
G SLC18A3 solute carrier family 18 member A3 part_of ISO
IBA		 RGD
GO_Central		 PMID:14724281 GO_REF:0000033 RGD:2317430 NCBI chr28:1,476,873...1,478,538
Ensembl chr28:1,476,774...1,478,505 		JBrowse link
G STON1 stonin 1 part_of IBA GO_Central GO_REF:0000033 NCBI chr10:50,421,635...50,470,302
Ensembl chr10:50,436,715...50,467,878 		JBrowse link
G STON2 stonin 2 part_of IBA GO_Central GO_REF:0000033 NCBI chr 8:53,591,194...53,725,710
Ensembl chr 8:53,597,780...53,725,688 		JBrowse link
G TBC1D5 TBC1 domain family member 5 part_of
located_in		 IEA
ISO		 (PMID:24603492) Ensembl
UniProt		 PMID:24603492 GO_REF:0000107 NCBI chr23:25,206,825...25,758,026
Ensembl chr23:25,254,448...25,757,385 		JBrowse link
clathrin coat of endocytic vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EPN2 epsin 2 ISO RGD PMID:10567358 RGD:708327 NCBI chr 5:40,871,157...40,951,772
Ensembl chr 5:40,872,006...40,919,416 		JBrowse link
clathrin-coated endocytic vesicle membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TYRP1 tyrosinase related protein 1 located_in ISO (PMID:19841138) UniProt PMID:19841138 NCBI chr11:33,317,084...33,336,029
Ensembl chr11:33,317,121...33,335,498 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 23074
    cellular anatomical structure 22784
      cytoplasm 11307
        cytoplasmic vesicle 1924
          endocytic vesicle 219
            clathrin-coated endocytic vesicle 28
              Syp1 complex 0
              clathrin-coated endocytic vesicle lumen 0
              clathrin-coated endocytic vesicle membrane + 14
              clathrin-coated phagocytic vesicle + 0
Path 2
Term Annotations click to browse term
  cellular_component 23074
    cellular anatomical structure 22784
      organelle 17402
        intracellular organelle 16967
          intracellular membrane-bounded organelle 15597
            intracellular vesicle 1933
              cytoplasmic vesicle 1924
                coated vesicle 240
                  clathrin-coated vesicle 145
                    clathrin-coated endocytic vesicle 28
                      Syp1 complex 0
                      clathrin-coated endocytic vesicle lumen 0
                      clathrin-coated endocytic vesicle membrane + 14
                      clathrin-coated phagocytic vesicle + 0
paths to the root