AP2B1 (adaptor related protein complex 2 subunit beta 1) - Rat Genome Database

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Gene: AP2B1 (adaptor related protein complex 2 subunit beta 1) Canis lupus familiaris
Analyze
Symbol: AP2B1
Name: adaptor related protein complex 2 subunit beta 1
RGD ID: 12242466
Description: ENCODES a protein that exhibits clathrin binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN aorta development (ortholog); cardiac septum development (ortholog); clathrin coat assembly (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH genetic disease (ortholog); middle cerebral artery infarction (ortholog); peroxisome biogenesis disorder 3A (ortholog); FOUND IN clathrin coat (ortholog); extrinsic component of presynaptic endocytic zone membrane (ortholog); glutamatergic synapse (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: adaptor related protein complex 2 beta 1 subunit; AP-2 complex subunit beta
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1937,946,761 - 38,078,074 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl937,946,788 - 38,078,041 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha937,170,891 - 37,302,120 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0938,758,380 - 38,889,742 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl938,756,039 - 38,889,684 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1937,541,221 - 37,673,744 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0937,826,684 - 37,958,055 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0937,914,210 - 38,045,500 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
AP2B1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1937,946,761 - 38,078,074 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl937,946,788 - 38,078,041 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha937,170,891 - 37,302,120 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0938,758,380 - 38,889,742 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl938,756,039 - 38,889,684 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1937,541,221 - 37,673,744 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0937,826,684 - 37,958,055 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0937,914,210 - 38,045,500 (-)NCBIUU_Cfam_GSD_1.0
AP2B1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381735,587,322 - 35,726,413 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1735,578,046 - 35,726,413 (+)EnsemblGRCh38hg38GRCh38
GRCh371733,914,341 - 34,053,432 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361730,938,395 - 31,077,549 (+)NCBINCBI36Build 36hg18NCBI36
Build 341730,938,405 - 31,077,541NCBI
Celera1730,824,398 - 30,963,574 (+)NCBICelera
Cytogenetic Map17q12NCBI
HuRef1730,099,253 - 30,238,599 (+)NCBIHuRef
CHM1_11733,978,907 - 34,118,050 (+)NCBICHM1_1
T2T-CHM13v2.01736,535,193 - 36,674,326 (+)NCBIT2T-CHM13v2.0
Ap2b1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391183,189,545 - 83,295,861 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1183,189,850 - 83,295,861 (+)EnsemblGRCm39 Ensembl
GRCm381183,298,719 - 83,405,035 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1183,299,024 - 83,405,035 (+)EnsemblGRCm38mm10GRCm38
MGSCv371183,116,199 - 83,218,537 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361183,118,892 - 83,221,230 (+)NCBIMGSCv36mm8
Celera1192,894,853 - 92,999,587 (+)NCBICelera
Cytogenetic Map11CNCBI
cM Map1150.3NCBI
Ap2b1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81068,596,925 - 68,702,547 (+)NCBIGRCr8
mRatBN7.21068,099,397 - 68,205,023 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1068,099,547 - 68,205,013 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1072,723,218 - 72,825,030 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01072,228,605 - 72,330,413 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01067,692,649 - 67,794,463 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01070,516,462 - 70,621,973 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1070,520,206 - 70,621,977 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01071,035,406 - 71,067,828 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01071,068,935 - 71,083,997 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41071,386,233 - 71,488,000 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11071,399,684 - 71,502,555 (+)NCBI
Celera1067,045,800 - 67,146,677 (+)NCBICelera
Cytogenetic Map10q26NCBI
Ap2b1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495548110,064,220 - 10,175,627 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495548110,061,021 - 10,175,070 (+)NCBIChiLan1.0ChiLan1.0
AP2B1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21928,750,972 - 28,892,336 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11730,632,528 - 30,769,787 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01721,070,132 - 21,208,610 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11721,363,115 - 21,501,720 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1721,363,121 - 21,501,721 (-)Ensemblpanpan1.1panPan2
Ap2b1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560236,949,807 - 37,069,908 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649012,233 - 127,715 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364905,156 - 127,666 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AP2B1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1239,800,972 - 39,932,643 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11239,803,105 - 39,940,801 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
AP2B1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11629,061,662 - 29,198,942 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1629,061,568 - 29,201,464 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666075774,355 - 913,998 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ap2b1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248753,090,656 - 3,208,593 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248753,085,518 - 3,206,930 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in AP2B1
1259 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 5 5 22 6 6 6 6 12 8 10 6
Low 6
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005624797 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038486269 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038486270 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038486271 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038486272 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038548091 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038548092 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038548093 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038548094 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609395 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609409 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038612061 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038612062 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038612063 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038612064 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038677309 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038677310 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038677311 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038677312 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_848630 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000094 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000313 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000028998   ⟹   ENSCAFP00000026968
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl937,946,788 - 38,077,989 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000068206   ⟹   ENSCAFP00000061054
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl937,953,972 - 38,077,989 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000069402   ⟹   ENSCAFP00000055402
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl937,946,788 - 38,077,989 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000072392   ⟹   ENSCAFP00000046335
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl937,946,788 - 38,077,989 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000073748   ⟹   ENSCAFP00000059031
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl937,946,788 - 38,077,989 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000084994   ⟹   ENSCAFP00000062820
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl938,062,569 - 38,078,041 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845017077   ⟹   ENSCAFP00845013299
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl938,756,039 - 38,889,649 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845017130   ⟹   ENSCAFP00845013343
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl938,758,398 - 38,889,684 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845017201   ⟹   ENSCAFP00845013406
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl938,874,207 - 38,889,325 (-)Ensembl
RefSeq Acc Id: XM_005624797   ⟹   XP_005624854
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1937,946,761 - 38,078,074 (-)NCBI
Dog10K_Boxer_Tasha937,170,891 - 37,302,119 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038486269   ⟹   XP_038342197
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1937,541,221 - 37,673,743 (-)NCBI
RefSeq Acc Id: XM_038486270   ⟹   XP_038342198
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1937,541,221 - 37,673,397 (-)NCBI
RefSeq Acc Id: XM_038486271   ⟹   XP_038342199
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1937,541,221 - 37,673,743 (-)NCBI
RefSeq Acc Id: XM_038486272   ⟹   XP_038342200
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1937,548,534 - 37,673,744 (-)NCBI
RefSeq Acc Id: XM_038548091   ⟹   XP_038404019
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0937,914,210 - 38,045,499 (-)NCBI
RefSeq Acc Id: XM_038548092   ⟹   XP_038404020
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0937,914,210 - 38,045,152 (-)NCBI
RefSeq Acc Id: XM_038548093   ⟹   XP_038404021
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0937,914,210 - 38,045,499 (-)NCBI
RefSeq Acc Id: XM_038548094   ⟹   XP_038404022
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0937,921,526 - 38,045,500 (-)NCBI
RefSeq Acc Id: XM_038609395   ⟹   XP_038465323
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha937,170,891 - 37,301,774 (-)NCBI
RefSeq Acc Id: XM_038609409   ⟹   XP_038465337
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha937,178,207 - 37,302,120 (-)NCBI
RefSeq Acc Id: XM_038612061   ⟹   XP_038467989
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0937,826,684 - 37,958,054 (-)NCBI
RefSeq Acc Id: XM_038612062   ⟹   XP_038467990
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0937,826,684 - 37,957,710 (-)NCBI
RefSeq Acc Id: XM_038612063   ⟹   XP_038467991
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0937,826,684 - 37,958,054 (-)NCBI
RefSeq Acc Id: XM_038612064   ⟹   XP_038467992
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0937,833,992 - 37,958,055 (-)NCBI
RefSeq Acc Id: XM_038677309   ⟹   XP_038533237
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0938,758,380 - 38,889,741 (-)NCBI
RefSeq Acc Id: XM_038677310   ⟹   XP_038533238
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0938,758,380 - 38,889,397 (-)NCBI
RefSeq Acc Id: XM_038677311   ⟹   XP_038533239
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0938,758,380 - 38,889,741 (-)NCBI
RefSeq Acc Id: XM_038677312   ⟹   XP_038533240
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0938,765,699 - 38,889,742 (-)NCBI
RefSeq Acc Id: XM_848630   ⟹   XP_853723
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1937,946,761 - 38,078,074 (-)NCBI
Dog10K_Boxer_Tasha937,170,891 - 37,302,119 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005624854 (Get FASTA)   NCBI Sequence Viewer  
  XP_038342197 (Get FASTA)   NCBI Sequence Viewer  
  XP_038342198 (Get FASTA)   NCBI Sequence Viewer  
  XP_038342199 (Get FASTA)   NCBI Sequence Viewer  
  XP_038342200 (Get FASTA)   NCBI Sequence Viewer  
  XP_038404019 (Get FASTA)   NCBI Sequence Viewer  
  XP_038404020 (Get FASTA)   NCBI Sequence Viewer  
  XP_038404021 (Get FASTA)   NCBI Sequence Viewer  
  XP_038404022 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465323 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465337 (Get FASTA)   NCBI Sequence Viewer  
  XP_038467989 (Get FASTA)   NCBI Sequence Viewer  
  XP_038467990 (Get FASTA)   NCBI Sequence Viewer  
  XP_038467991 (Get FASTA)   NCBI Sequence Viewer  
  XP_038467992 (Get FASTA)   NCBI Sequence Viewer  
  XP_038533237 (Get FASTA)   NCBI Sequence Viewer  
  XP_038533238 (Get FASTA)   NCBI Sequence Viewer  
  XP_038533239 (Get FASTA)   NCBI Sequence Viewer  
  XP_038533240 (Get FASTA)   NCBI Sequence Viewer  
  XP_853723 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000026968.3
  ENSCAFP00000046335.2
  ENSCAFP00000062820.1
  ENSCAFP00030031253.1
  ENSCAFP00030031371.1
  ENSCAFP00030031492.1
  ENSCAFP00030031630.1
  ENSCAFP00030031753.1
  ENSCAFP00040008488.1
  ENSCAFP00040008563.1
  ENSCAFP00040008642.1
  ENSCAFP00040008716.1
  ENSCAFP00040008798.1
  ENSCAFP00845013299
  ENSCAFP00845013299.1
  ENSCAFP00845013343
  ENSCAFP00845013343.1
  ENSCAFP00845013406.1
Reference Protein Sequences
RefSeq Acc Id: XP_853723   ⟸   XM_848630
- Peptide Label: isoform X1
- UniProtKB: A0A8C0NRZ9 (UniProtKB/TrEMBL),   A0A8I3NCI2 (UniProtKB/TrEMBL),   A0A8C0NU37 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005624854   ⟸   XM_005624797
- Peptide Label: isoform X2
- UniProtKB: A0A8C0Q5V5 (UniProtKB/TrEMBL),   A0A8I3ND36 (UniProtKB/TrEMBL),   A0A8C0NS87 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000055402   ⟸   ENSCAFT00000069402
RefSeq Acc Id: ENSCAFP00000062820   ⟸   ENSCAFT00000084994
RefSeq Acc Id: ENSCAFP00000026968   ⟸   ENSCAFT00000028998
RefSeq Acc Id: ENSCAFP00000059031   ⟸   ENSCAFT00000073748
RefSeq Acc Id: ENSCAFP00000061054   ⟸   ENSCAFT00000068206
RefSeq Acc Id: ENSCAFP00000046335   ⟸   ENSCAFT00000072392
RefSeq Acc Id: XP_038342199   ⟸   XM_038486271
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038342197   ⟸   XM_038486269
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038342198   ⟸   XM_038486270
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038342200   ⟸   XM_038486272
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038467991   ⟸   XM_038612063
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038467989   ⟸   XM_038612061
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038467990   ⟸   XM_038612062
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038467992   ⟸   XM_038612064
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038533239   ⟸   XM_038677311
- Peptide Label: isoform X2
- UniProtKB: A0A8C0Q5V5 (UniProtKB/TrEMBL),   A0A8I3ND36 (UniProtKB/TrEMBL),   A0A8C0NS87 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038533237   ⟸   XM_038677309
- Peptide Label: isoform X1
- UniProtKB: A0A8C0NRZ9 (UniProtKB/TrEMBL),   A0A8I3NCI2 (UniProtKB/TrEMBL),   A0A8C0NU37 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038533238   ⟸   XM_038677310
- Peptide Label: isoform X1
- UniProtKB: A0A8C0NRZ9 (UniProtKB/TrEMBL),   A0A8I3NCI2 (UniProtKB/TrEMBL),   A0A8C0NU37 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038533240   ⟸   XM_038677312
- Peptide Label: isoform X3
- UniProtKB: A0A8C0RP16 (UniProtKB/TrEMBL),   A0A8C0NU37 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038465323   ⟸   XM_038609395
- Peptide Label: isoform X1
- UniProtKB: A0A8C0NRZ9 (UniProtKB/TrEMBL),   A0A8I3NCI2 (UniProtKB/TrEMBL),   A0A8C0NU37 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038465337   ⟸   XM_038609409
- Peptide Label: isoform X3
- UniProtKB: A0A8C0RP16 (UniProtKB/TrEMBL),   A0A8C0NU37 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038404021   ⟸   XM_038548093
- Peptide Label: isoform X2
- UniProtKB: A0A8C0NS87 (UniProtKB/TrEMBL),   A0A8C0Q5V5 (UniProtKB/TrEMBL),   A0A8I3ND36 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038404019   ⟸   XM_038548091
- Peptide Label: isoform X1
- UniProtKB: A0A8C0NRZ9 (UniProtKB/TrEMBL),   A0A8C0NU37 (UniProtKB/TrEMBL),   A0A8I3NCI2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038404020   ⟸   XM_038548092
- Peptide Label: isoform X1
- UniProtKB: A0A8C0NRZ9 (UniProtKB/TrEMBL),   A0A8C0NU37 (UniProtKB/TrEMBL),   A0A8I3NCI2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038404022   ⟸   XM_038548094
- Peptide Label: isoform X3
- UniProtKB: A0A8C0NU37 (UniProtKB/TrEMBL),   A0A8C0RP16 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845013343   ⟸   ENSCAFT00845017130
RefSeq Acc Id: ENSCAFP00845013299   ⟸   ENSCAFT00845017077
RefSeq Acc Id: ENSCAFP00845013406   ⟸   ENSCAFT00845017201
Protein Domains
Beta-adaptin appendage C-terminal subdomain   Clathrin adaptor alpha/beta/gamma-adaptin appendage

Promoters
RGD ID:13684649
Promoter ID:EPDNEW_C2716
Type:initiation region
Name:AP2B1_1
Description:adaptor related protein complex 2 beta 1 subunit
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1938,078,001 - 38,078,061EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000018246 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030019436 UniProtKB/TrEMBL
  ENSCAFG00040005203 UniProtKB/TrEMBL
  ENSCAFG00845009662 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000028998.5 UniProtKB/TrEMBL
  ENSCAFT00000072392.2 UniProtKB/TrEMBL
  ENSCAFT00000084994.2 UniProtKB/TrEMBL
  ENSCAFT00030035835.1 UniProtKB/TrEMBL
  ENSCAFT00030035966.1 UniProtKB/TrEMBL
  ENSCAFT00030036100.1 UniProtKB/TrEMBL
  ENSCAFT00030036258.1 UniProtKB/TrEMBL
  ENSCAFT00030036398.1 UniProtKB/TrEMBL
  ENSCAFT00040009798.1 UniProtKB/TrEMBL
  ENSCAFT00040009878.1 UniProtKB/TrEMBL
  ENSCAFT00040009969.1 UniProtKB/TrEMBL
  ENSCAFT00040010056.1 UniProtKB/TrEMBL
  ENSCAFT00040010142.1 UniProtKB/TrEMBL
  ENSCAFT00845017077 ENTREZGENE
  ENSCAFT00845017077.1 UniProtKB/TrEMBL
  ENSCAFT00845017130 ENTREZGENE
  ENSCAFT00845017130.1 UniProtKB/TrEMBL
  ENSCAFT00845017201.1 UniProtKB/TrEMBL
Gene3D-CATH 1.25.10.10 UniProtKB/TrEMBL
  2.60.40.1150 UniProtKB/TrEMBL
  3.30.310.10 UniProtKB/TrEMBL
InterPro AP_beta UniProtKB/TrEMBL
  AP_complex_bsu_1_2_4 UniProtKB/TrEMBL
  ARM-like UniProtKB/TrEMBL
  ARM-type_fold UniProtKB/TrEMBL
  Armadillo UniProtKB/TrEMBL
  B-adaptin_app_sub_C UniProtKB/TrEMBL
  Clathrin/coatomer_adapt-like_N UniProtKB/TrEMBL
  Clathrin_a/b/g-adaptin_app_Ig UniProtKB/TrEMBL
  Clathrin_app_Ig-like_sf UniProtKB/TrEMBL
  Clathrin_b-adaptin_app_Ig-like UniProtKB/TrEMBL
  Coatomer/calthrin_app_sub_C UniProtKB/TrEMBL
  TBP_dom_sf UniProtKB/TrEMBL
KEGG Report cfa:480605 UniProtKB/TrEMBL
NCBI Gene AP2B1 ENTREZGENE
PANTHER AP-2 COMPLEX SUBUNIT BETA UniProtKB/TrEMBL
  PTHR11134 UniProtKB/TrEMBL
Pfam Adaptin_N UniProtKB/TrEMBL
  Alpha_adaptinC2 UniProtKB/TrEMBL
  B2-adapt-app_C UniProtKB/TrEMBL
PIRSF AP_complex_beta UniProtKB/TrEMBL
SMART Alpha_adaptinC2 UniProtKB/TrEMBL
  ARM UniProtKB/TrEMBL
  B2-adapt-app_C UniProtKB/TrEMBL
Superfamily-SCOP SSF48371 UniProtKB/TrEMBL
  SSF49348 UniProtKB/TrEMBL
  SSF55711 UniProtKB/TrEMBL
UniProt A0A8C0NRZ9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0NS87 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0NU37 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0Q4I9_CANLF UniProtKB/TrEMBL
  A0A8C0Q5V5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0RP16 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NCI2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3ND36 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NP72_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:37960 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-05-01 AP2B1  adaptor related protein complex 2 subunit beta 1    adaptor related protein complex 2 beta 1 subunit  Symbol and/or name change 5135510 APPROVED