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ONTOLOGY REPORT - ANNOTATIONS

Term:pre-miRNA processing
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Accession:GO:0031054 term browser browse the term
Definition:A process involved in the conversion of a pre-microRNA transcript into a mature microRNA molecule.
Synonyms:exact_synonym: pre-microRNA processing


show annotations for term's descendants           Sort by:
pre-miRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adar adenosine deaminase, RNA-specific acts_upstream_of_or_within ISO MGI GO_REF:0000008 NCBI chr 3:89,622,321...89,660,756
Ensembl chr 3:89,622,329...89,660,753 		JBrowse link
G Ago1 argonaute RISC catalytic subunit 1 involved_in ISO
IBA		 GO_Central GO_REF:0000033 GO_REF:0000119 NCBI chr 4:126,328,805...126,362,500
Ensembl chr 4:126,328,805...126,362,376 		JBrowse link
G Ago2 argonaute RISC catalytic subunit 2 involved_in ISO
IDA
ISS
IBA		 (PMID:16357216) GO_Central
BHF-UCL
ComplexPortal
UniProt		 PMID:16357216 GO_REF:0000024 GO_REF:0000033 GO_REF:0000114 GO_REF:0000119 NCBI chr15:72,967,693...73,056,777
Ensembl chr15:72,967,693...73,056,784 		JBrowse link
G Ago3 argonaute RISC catalytic subunit 3 involved_in ISO
IBA
IEA		 GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119 NCBI chr 4:126,220,797...126,323,360
Ensembl chr 4:126,225,497...126,323,349 		JBrowse link
G Ago4 argonaute RISC catalytic subunit 4 involved_in ISO
IEA
IBA		 GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119 NCBI chr 4:126,383,280...126,427,379
Ensembl chr 4:126,383,334...126,427,265 		JBrowse link
G Bcdin3d BCDIN3 domain containing involved_in IEA
ISO		 Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr15:99,367,965...99,372,611
Ensembl chr15:99,367,960...99,372,611 		JBrowse link
G Dicer1 dicer 1, ribonuclease type III acts_upstream_of_or_within
involved_in		 IDA
IBA
ISO
ISS		 (PMID:18604195) MGI
GO_Central
ComplexPortal
UniProt		 PMID:18604195 GO_REF:0000024 GO_REF:0000033 GO_REF:0000114 GO_REF:0000119 NCBI chr12:104,654,001...104,718,331
Ensembl chr12:104,654,001...104,718,211 		JBrowse link
G Drosha drosha, ribonuclease type III acts_upstream_of_or_within
involved_in		 IDA
IBA		 (PMID:18604195) MGI
GO_Central		 PMID:18604195 GO_REF:0000033 NCBI chr15:12,824,893...12,935,377
Ensembl chr15:12,824,901...12,935,377 		JBrowse link
G Lin28a lin-28 homolog A acts_upstream_of_or_within
involved_in		 IDA
IBA
IMP
ISO		 (PMID:18604195)
(PMID:18292307), (PMID:18604195)		 MGI
GO_Central
UniProt		 PMID:18292307 PMID:18604195 GO_REF:0000033 GO_REF:0000119 NCBI chr 4:133,730,641...133,746,504
Ensembl chr 4:133,730,641...133,746,152 		JBrowse link
G Lin28b lin-28 homolog B involved_in ISS
IBA
ISO		 UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000119 NCBI chr10:45,252,713...45,362,410
Ensembl chr10:45,252,716...45,362,491 		JBrowse link
G Prkra protein kinase, interferon inducible double stranded RNA dependent activator involved_in ISO ComplexPortal
GO_Central		 GO_REF:0000114 GO_REF:0000119 NCBI chr 2:76,436,385...76,478,614
Ensembl chr 2:76,460,242...76,478,359 		JBrowse link
G Tarbp2 TARBP2, RISC loading complex RNA binding subunit involved_in ISO
ISS		 ComplexPortal
GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000114 GO_REF:0000119 NCBI chr15:102,423,327...102,432,112
Ensembl chr15:102,426,627...102,432,111 		JBrowse link
G Tut4 terminal uridylyl transferase 4 involved_in ISO
ISS		 GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000119 NCBI chr 4:108,316,607...108,416,612
Ensembl chr 4:108,316,623...108,416,618 		JBrowse link
G Tut7 terminal uridylyl transferase 7 involved_in ISS
ISO		 UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000119 NCBI chr13:59,919,690...59,971,060
Ensembl chr13:59,919,375...59,970,961 		JBrowse link
negative regulation of pre-miRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcdin3d BCDIN3 domain containing involved_in IBA
ISO
ISS		 GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000119 NCBI chr15:99,367,965...99,372,611
Ensembl chr15:99,367,960...99,372,611 		JBrowse link
G Lin28a lin-28 homolog A involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr 4:133,730,641...133,746,504
Ensembl chr 4:133,730,641...133,746,152 		JBrowse link
G Lin28b lin-28 homolog B involved_in IEA
ISO		 Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr10:45,252,713...45,362,410
Ensembl chr10:45,252,716...45,362,491 		JBrowse link
positive regulation of pre-miRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dgcr8 DGCR8, microprocessor complex subunit involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr16:18,071,812...18,107,115
Ensembl chr16:18,071,812...18,107,110 		JBrowse link
G Trub1 TruB pseudouridine (psi) synthase family member 1 involved_in ISO
ISS		 GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000119 NCBI chr19:57,441,323...57,479,437
Ensembl chr19:57,441,344...57,479,437 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28635
    cellular process 18392
      metabolic process 11624
        primary metabolic process 10232
          RNA processing 955
            regulatory ncRNA processing 69
              miRNA processing 44
                pre-miRNA processing 16
                  negative regulation of pre-miRNA processing 3
                  positive regulation of pre-miRNA processing 2
                  pre-miRNA 3'-end processing 0
                  regulation of pre-miRNA processing + 5
Path 2
Term Annotations click to browse term
  biological_process 28635
    biological regulation 13450
      regulation of biological process 13009
        regulation of cellular process 12632
          regulation of metabolic process 6975
            regulation of biosynthetic process 5711
              regulation of macromolecule biosynthetic process 5492
                regulation of gene expression 5373
                  negative regulation of gene expression 1530
                    regulatory ncRNA-mediated gene silencing 406
                      regulatory ncRNA processing 69
                        miRNA processing 44
                          pre-miRNA processing 16
                            negative regulation of pre-miRNA processing 3
                            positive regulation of pre-miRNA processing 2
                            pre-miRNA 3'-end processing 0
                            regulation of pre-miRNA processing + 5
paths to the root