ONTOLOGY REPORT - ANNOTATIONS |
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Term: | RNA processing |
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Accession: | GO:0006396
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browse the term
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Definition: | Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules. |
Synonyms: | alt_id: | GO:0006394 |
| xref: | Wikipedia:Post-transcriptional_modification |
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AABR07061825.1 |
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involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
Ensembl chr 4:147,929,863...147,931,068
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Adad1 |
adenosine deaminase domain containing 1 |
involved_in |
IEA IBA |
GO_REF:0000002 PMID:21873635 |
InterPro |
PMID:21873635, PMID:21873635 |
GO_REF:0000002, RGD:13792537, RGD:13792537 |
NCBI chr 2:123,790,798...123,848,598
Ensembl chr 2:123,790,915...123,848,179
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Adad2 |
adenosine deaminase domain containing 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr19:52,258,908...52,263,031
Ensembl chr19:52,258,947...52,262,959
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Adar |
adenosine deaminase, RNA-specific |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 2:189,045,551...189,085,448
Ensembl chr 2:189,062,443...189,083,236
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Adarb1 |
adenosine deaminase, RNA-specific, B1 |
involved_in |
IEA ISO IBA ISS |
GO_REF:0000002 GO_REF:0000107 (PMID:9149227) (PMID:32220291) PMID:21873635 PMID:14759252 |
InterPro Ensembl RGD |
PMID:9149227 PMID:32220291, PMID:21873635, PMID:14759252, PMID:21873635, PMID:14759252 |
GO_REF:0000002 GO_REF:0000107, RGD:13792537, RGD:8553748, RGD:13792537, RGD:8553748 |
NCBI chr20:11,972,352...12,101,022
Ensembl chr20:11,972,381...12,101,047
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Adarb2 |
adenosine deaminase, RNA-specific, B2 |
involved_in |
IEA IBA |
GO_REF:0000002 PMID:21873635 |
InterPro |
PMID:21873635, PMID:21873635 |
GO_REF:0000002, RGD:13792537, RGD:13792537 |
NCBI chr17:58,098,979...58,653,137
Ensembl chr17:58,104,559...58,301,260
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Ccnl1 |
cyclin L1 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 2:157,747,295...157,759,838
Ensembl chr 2:157,747,542...157,759,838
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Cherp |
calcium homeostasis endoplasmic reticulum protein |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr16:19,068,783...19,081,837
Ensembl chr16:19,068,783...19,081,837
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Clp1 |
cleavage factor polyribonucleotide kinase subunit 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 3:72,125,269...72,137,122
Ensembl chr 3:72,125,273...72,128,973
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Crnkl1 |
crooked neck pre-mRNA splicing factor 1 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 6:18,349,226...18,351,540
Ensembl chr 6:18,349,167...18,351,536
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Ddx54 |
DEAD-box helicase 54 |
involved_in |
ISO |
(PMID:12466272) |
RGD |
PMID:12466272 |
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NCBI chr12:41,469,642...41,484,887
Ensembl chr12:41,470,557...41,485,122
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Dicer1 |
dicer 1 ribonuclease III |
acts_upstream_of_or_within |
ISO |
MGI:3589208 (MGI:2679763|PMID:14528307), (MGI:3775688|PMID:17804764) |
RGD |
PMID:14528307 PMID:17804764 |
MGI:2679763 MGI:3775688 |
NCBI chr 6:128,388,084...128,453,234
Ensembl chr 6:128,388,053...128,434,183
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Dkc1 |
dyskerin pseudouridine synthase 1 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr X:155,844,914...155,862,363
Ensembl chr X:155,844,857...155,862,475
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Drosha |
drosha ribonuclease III |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 2:62,887,267...63,000,307
Ensembl chr 2:62,887,267...62,999,572
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Elavl4 |
ELAV like RNA binding protein 4 |
involved_in |
ISO ISS |
(PMID:17035636) GO_REF:0000024 |
RGD UniProt |
PMID:17035636 |
GO_REF:0000024 |
NCBI chr 5:130,001,387...130,144,557
Ensembl chr 5:130,001,372...130,085,838
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Exosc1 |
exosome component 1 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 1:261,169,798...261,179,865
Ensembl chr 1:261,170,229...261,179,790
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Exosc9 |
exosome component 9 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 2:123,264,679...123,275,623
Ensembl chr 2:123,264,694...123,294,880
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Fastkd2 |
FAST kinase domains 2 |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (PMID:26370583) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:26370583 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 9:70,448,386...70,471,420
Ensembl chr 9:70,450,444...70,470,550
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Grsf1 |
G-rich RNA sequence binding factor 1 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr14:21,039,990...21,056,413
Ensembl chr14:21,039,990...21,056,452
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Hnrnph1 |
heterogeneous nuclear ribonucleoprotein H1 |
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TAS |
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RGD |
PMID:7512260 |
RGD:1302261 |
NCBI chr10:35,872,619...35,879,911
Ensembl chr10:35,870,232...35,879,910
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Hnrnpk |
heterogeneous nuclear ribonucleoprotein K |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr17:6,664,730...6,676,753
Ensembl chr17:6,665,659...6,676,654
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Hnrnpul1 |
heterogeneous nuclear ribonucleoprotein U-like 1 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 1:82,512,745...82,548,446
Ensembl chr 1:82,512,745...82,546,937
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Larp6 |
La ribonucleoprotein 6, translational regulator |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 8:65,611,570...65,632,706
Ensembl chr 8:65,611,570...65,632,706
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LOC100359916 |
heterogeneous nuclear ribonucleoprotein K-like |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 5:59,911,439...59,913,324
Ensembl chr 5:59,911,431...59,913,348
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LOC100909712 |
cyclin-L1-like |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 2:157,759,898...157,763,422
Ensembl chr 2:157,747,542...157,759,838
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LOC680385 |
similar to Sjogren syndrome antigen B |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 4:147,929,498...147,931,250
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Mrpl44 |
mitochondrial ribosomal protein L44 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 9:85,542,763...85,547,814
Ensembl chr 9:85,542,702...85,548,144
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Nol9 |
nucleolar protein 9 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 5:169,213,076...169,233,173
Ensembl chr 5:169,213,115...169,230,141
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Rnasel |
ribonuclease L |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr13:71,188,712...71,202,636
Ensembl chr13:71,192,142...71,202,625
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Rngtt |
RNA guanylyltransferase and 5'-phosphatase |
involved_in |
ISO |
(PMID:21636784) |
RGD |
PMID:21636784 |
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NCBI chr 5:48,561,325...48,779,214
Ensembl chr 5:48,561,339...48,779,207
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Rtca |
RNA 3'-terminal phosphate cyclase |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 2:219,537,213...219,558,489
Ensembl chr 2:219,537,206...219,558,675
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Sfswap |
splicing factor SWAP |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr12:30,740,563...30,811,015
Ensembl chr12:30,740,520...30,811,054
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Ssb |
small RNA binding exonuclease protection factor La |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 3:56,092,425...56,102,008
Ensembl chr 3:56,092,501...56,102,001
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Trmt2a |
tRNA methyltransferase 2 homolog A |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr11:86,885,671...86,890,482
Ensembl chr11:86,885,626...86,890,390
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U2surp |
U2 snRNP-associated SURP domain containing |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 8:103,242,095...103,299,082
Ensembl chr 8:103,246,558...103,298,927
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Wbp11 |
WW domain binding protein 11 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 4:170,772,166...170,785,613
Ensembl chr 4:170,772,163...170,810,080 Ensembl chr 4:170,772,163...170,810,080
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Wbp11l1 |
WW domain-binding protein 11-like 1 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 4:170,154,257...170,167,724
Ensembl chr 4:170,154,227...170,186,942
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Wdhd1 |
WD repeat and HMG-box DNA binding protein 1 |
acts_upstream_of_or_within |
ISO |
(MGI:5317038|PMID:21266480) |
RGD |
PMID:21266480 |
MGI:5317038 |
NCBI chr15:24,021,674...24,056,073
Ensembl chr15:24,021,674...24,056,073
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Tgs1 |
trimethylguanosine synthase 1 |
involved_in |
ISO IBA |
(PMID:16687569) PMID:21873635 |
RGD |
PMID:16687569, PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 5:16,413,356...16,446,881
Ensembl chr 5:16,413,356...16,446,881
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Cmtr1 |
cap methyltransferase 1 |
involved_in |
IEA IBA ISO ISS |
GO_REF:0000107 PMID:21873635 (PMID:20713356), (PMID:21310715) GO_REF:0000104 GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:20713356 PMID:21310715, PMID:21873635, PMID:21873635 |
GO_REF:0000024 GO_REF:0000104 GO_REF:0000107, RGD:13792537, RGD:13792537 |
NCBI chr20:8,324,968...8,385,174
Ensembl chr20:8,312,792...8,368,764
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Cmtr2 |
cap methyltransferase 2 |
involved_in |
ISO IBA |
(PMID:21310715) PMID:21873635 |
RGD |
PMID:21310715, PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr19:41,426,536...41,433,367
Ensembl chr19:41,427,504...41,433,346
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Ncbp1 |
nuclear cap binding protein subunit 1 |
involved_in |
ISO ISS |
(PMID:12434151) GO_REF:0000024 |
RGD UniProt |
PMID:12434151 |
GO_REF:0000024 |
NCBI chr 5:61,734,118...61,767,098
Ensembl chr 5:61,734,118...61,766,481
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Ramac |
RNA guanine-7 methyltransferase activating subunit |
involved_in |
ISO |
(PMID:22099306) |
RGD |
PMID:22099306 |
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NCBI chr 1:143,583,675...143,589,563
Ensembl chr 1:143,583,675...143,589,556
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Rngtt |
RNA guanylyltransferase and 5'-phosphatase |
involved_in |
ISO IBA |
(PMID:9473487) PMID:21873635 |
RGD |
PMID:9473487, PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 5:48,561,325...48,779,214
Ensembl chr 5:48,561,339...48,779,207
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Rnmt |
RNA (guanine-7-) methyltransferase |
involved_in |
ISS ISO IBA |
GO_REF:0000024 (PMID:27422871), (PMID:9790902) PMID:21873635 |
UniProt RGD |
PMID:9790902 PMID:27422871, PMID:21873635, PMID:21873635 |
GO_REF:0000024, RGD:13792537, RGD:13792537 |
NCBI chr18:64,084,746...64,108,246
Ensembl chr18:64,084,795...64,108,246
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Tgs1 |
trimethylguanosine synthase 1 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 5:16,413,356...16,446,881
Ensembl chr 5:16,413,356...16,446,881
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AABR07056845.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr 7:43,601,513...43,602,285
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Cdk13 |
cyclin-dependent kinase 13 |
involved_in |
ISO |
(MGI:3699439|PMID:17261272) |
RGD |
PMID:17261272 |
MGI:3699439 |
NCBI chr17:49,833,194...49,922,932
Ensembl chr17:49,833,400...49,921,550
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Celf4 |
CUGBP, Elav-like family member 4 |
involved_in |
ISO |
(PMID:19720736) |
RGD |
PMID:19720736 |
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NCBI chr18:17,689,090...18,079,835
Ensembl chr18:17,698,038...17,716,880
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Ddx17 |
DEAD-box helicase 17 |
involved_in |
ISO IBA |
(PMID:24275493), (PMID:24910439) (MGI:5883203|PMID:24910439) PMID:21873635 |
RGD |
PMID:24275493 PMID:24910439, PMID:21873635, PMID:21873635 |
MGI:5883203, RGD:13792537, RGD:13792537 |
NCBI chr 7:120,761,843...120,765,012
Ensembl chr 7:120,761,826...120,780,641
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Ddx5 |
DEAD-box helicase 5 |
involved_in |
ISO |
(PMID:24275493), (PMID:24910439) (MGI:5883203|PMID:24910439) |
RGD |
PMID:24275493 PMID:24910439 |
MGI:5883203 |
NCBI chr10:94,979,759...94,988,461
Ensembl chr10:94,980,928...94,988,461
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Dhx9 |
DExH-box helicase 9 |
involved_in |
ISO |
(PMID:28221134) |
RGD |
PMID:28221134 |
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NCBI chr13:70,885,503...70,922,278
Ensembl chr13:70,885,504...70,922,245
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Esrp1 |
epithelial splicing regulatory protein 1 |
acts_upstream_of_or_within |
ISO |
MGI:1924661 (MGI:5699497|PMID:26371508) |
RGD |
PMID:26371508 |
MGI:5699497 |
NCBI chr 5:24,576,988...24,631,758
Ensembl chr 5:24,576,991...24,631,698
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Esrp2 |
epithelial splicing regulatory protein 2 |
acts_upstream_of_or_within involved_in |
IEA ISO |
GO_REF:0000107 MGI:1917326 (MGI:5699497|PMID:26371508) |
Ensembl RGD |
PMID:26371508 |
GO_REF:0000107 MGI:5699497 |
NCBI chr19:38,113,412...38,120,578
Ensembl chr19:38,113,412...38,120,578
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Hnrnpa1 |
heterogeneous nuclear ribonucleoprotein A1 |
acts_upstream_of_or_within |
ISO |
(MGI:3575934|PMID:15798186) |
RGD |
PMID:15798186 |
MGI:3575934 |
NCBI chr 7:144,865,302...144,871,592
Ensembl chr 7:144,865,608...144,871,585
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Hnrnpm |
heterogeneous nuclear ribonucleoprotein M |
involved_in |
ISO IEA IBA |
(PMID:19874820) GO_REF:0000107 PMID:21873635 |
RGD Ensembl |
PMID:19874820, PMID:21873635, PMID:21873635 |
GO_REF:0000107, RGD:13792537, RGD:13792537 |
NCBI chr 7:18,516,253...18,554,536
Ensembl chr 7:18,516,512...18,554,227
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Insr |
insulin receptor |
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IEP |
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RGD |
PMID:23633480 |
RGD:9685423 |
NCBI chr12:1,682,527...1,816,414
Ensembl chr12:1,680,957...1,816,414
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Kdm1a |
lysine demethylase 1A |
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IEP |
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RGD |
PMID:20164337 |
RGD:9588288 |
NCBI chr 5:154,909,003...154,965,171
Ensembl chr 5:154,909,003...154,965,171
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Mbnl1 |
muscleblind-like splicing regulator 1 |
acts_upstream_of_or_within |
ISO |
MGI:3052922 (MGI:3821939|PMID:19075228), (MGI:5009479|PMID:19720736) |
RGD |
PMID:19075228 PMID:19720736 |
MGI:3821939 MGI:5009479 |
NCBI chr 2:150,698,248...150,867,791
Ensembl chr 2:150,756,185...150,869,690
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Pqbp1 |
polyglutamine binding protein 1 |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (MGI:5477858|PMID:23512658) GO_REF:0000024 (PMID:23512658) |
Ensembl RGD UniProt |
PMID:23512658 |
GO_REF:0000024 GO_REF:0000107 MGI:5477858 |
NCBI chr X:15,448,570...15,453,130
Ensembl chr X:15,348,138...15,453,130
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Puf60 |
poly-U binding splicing factor 60 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 7:117,129,237...117,140,234
Ensembl chr 7:117,129,237...117,140,214
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Rbfox2 |
RNA binding fox-1 homolog 2 |
acts_upstream_of_or_within |
ISO |
MGI:6442563 (MGI:6402838|PMID:32109384) |
RGD |
PMID:32109384 |
MGI:6402838 |
NCBI chr 7:118,157,093...118,396,733
Ensembl chr 7:118,156,946...118,396,728
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Rbm17 |
RNA binding motif protein 17 |
involved_in |
ISO IBA |
(PMID:17589525) PMID:21873635 |
RGD |
PMID:17589525, PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr17:70,586,345...70,603,289
Ensembl chr17:70,586,394...70,603,267
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Rsrc1 |
arginine and serine rich coiled-coil 1 |
acts_upstream_of_or_within involved_in |
ISO IBA |
(MGI:3575934|PMID:15798186) PMID:21873635 |
RGD |
PMID:15798186, PMID:21873635, PMID:21873635 |
MGI:3575934, RGD:13792537, RGD:13792537 |
NCBI chr 2:164,126,898...164,533,652
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Scnm1 |
sodium channel modifier 1 |
involved_in |
ISO |
(MGI:3770352|PMID:17656373) |
RGD |
PMID:17656373 |
MGI:3770352 |
NCBI chr 2:196,300,239...196,304,419
Ensembl chr 2:196,300,239...196,304,169
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Sfpq |
splicing factor proline and glutamine rich |
involved_in |
ISO IBA |
(PMID:19874820) PMID:21873635 |
RGD |
PMID:19874820, PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 5:145,079,803...145,088,517
Ensembl chr 5:145,079,803...145,088,498
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G |
Sfswap |
splicing factor SWAP |
acts_upstream_of_or_within involved_in |
IEA ISO |
GO_REF:0000107 (MGI:84585|PMID:8940107) |
Ensembl RGD |
PMID:8940107 |
GO_REF:0000107 MGI:84585 |
NCBI chr12:30,740,563...30,811,015
Ensembl chr12:30,740,520...30,811,054
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G |
Slu7 |
SLU7 homolog, splicing factor |
involved_in |
ISO ISS |
(PMID:15728250) PMID:15181151 |
RGD |
PMID:15728250, PMID:15181151, PMID:15181151 |
RGD:1304333, RGD:1304333 |
NCBI chr10:29,029,556...29,044,919
Ensembl chr10:29,029,590...29,044,583
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G |
Smptb |
polypyrimidine tract-binding protein |
|
IDA |
|
RGD |
PMID:12578833 |
RGD:1299129 |
NCBI chr X:17,484,839...17,486,721
Ensembl chr X:17,484,839...17,486,721
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G |
Srsf1 |
serine and arginine rich splicing factor 1 |
involved_in |
ISO IBA IMP |
(PMID:8940107) PMID:21873635 |
RGD |
PMID:8940107, PMID:21873635, PMID:23462647 |
RGD:13792537, RGD:11038736 |
NCBI chr10:75,334,200...75,341,197
Ensembl chr10:75,335,146...75,341,197
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G |
Srsf6 |
serine and arginine rich splicing factor 6 |
involved_in |
ISO ISS IBA |
(PMID:22767602) GO_REF:0000024 PMID:21873635 |
RGD UniProt |
PMID:22767602, PMID:21873635, PMID:21873635 |
GO_REF:0000024, RGD:13792537, RGD:13792537 |
NCBI chr 3:159,305,345...159,310,668
Ensembl chr 3:159,305,345...159,310,668
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G |
Srsf9 |
serine and arginine rich splicing factor 9 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr12:47,039,714...47,046,022
Ensembl chr12:47,039,716...47,046,022
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G |
Strap |
serine/threonine kinase receptor associated protein |
involved_in |
ISO |
(MGI:6490747|PMID:33230114) |
RGD |
PMID:33230114 |
MGI:6490747 |
NCBI chr 4:171,730,629...171,744,877
Ensembl chr 4:171,730,635...171,745,377
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G |
Fbl |
fibrillarin |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 1:85,103,519...85,112,619
Ensembl chr 1:85,103,519...85,112,619
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G |
Fbll1 |
fibrillarin-like 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr10:20,620,957...20,622,600
Ensembl chr10:20,620,957...20,622,600
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G |
Larp7 |
La ribonucleoprotein 7, transcriptional regulator |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (MGI:6400674|PMID:32017896) GO_REF:0000107 (PMID:32017898) |
UniProt RGD Ensembl |
PMID:32017896 PMID:32017898 |
GO_REF:0000024 GO_REF:0000107 MGI:6400674 |
NCBI chr 2:231,866,888...231,882,002
Ensembl chr 2:231,867,135...231,881,939
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G |
Dkc1 |
dyskerin pseudouridine synthase 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr X:155,844,914...155,862,363
Ensembl chr X:155,844,857...155,862,475
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G |
Parn |
poly(A)-specific ribonuclease |
involved_in |
ISO |
(PMID:22442037) |
RGD |
PMID:22442037 |
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NCBI chr10:1,309,724...1,461,123
Ensembl chr10:1,308,414...1,461,269
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G |
Bop1 |
BOP1 ribosomal biogenesis factor |
involved_in |
ISO |
(MGI:3843427|PMID:17353269) |
RGD |
PMID:17353269 |
MGI:3843427 |
NCBI chr 7:117,514,529...117,538,342
Ensembl chr 7:117,514,533...117,538,342
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G |
Nol9 |
nucleolar protein 9 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 5:169,213,076...169,233,173
Ensembl chr 5:169,213,115...169,230,141
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G |
Npm1 |
nucleophosmin 1 |
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IDA |
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RGD |
PMID:9742256 |
RGD:11535027 |
NCBI chr10:18,080,949...18,091,062
Ensembl chr10:18,080,950...18,090,950
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G |
LOC103690013 |
H/ACA ribonucleoprotein complex subunit 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr10:37,069,387...37,072,758
Ensembl chr10:37,069,344...37,072,733
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G |
Nhp2 |
NHP2 ribonucleoprotein |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr10:34,975,701...34,979,082
Ensembl chr10:34,975,708...34,979,082
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G |
Nob1 |
NIN1 (RPN12) binding protein 1 homolog |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr19:38,397,466...38,409,924
Ensembl chr19:38,397,466...38,409,924
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G |
Rrp36 |
ribosomal RNA processing 36 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 9:16,618,853...16,627,128
Ensembl chr 9:16,619,040...16,625,609
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G |
Dicer1 |
dicer 1 ribonuclease III |
involved_in |
ISO |
(PMID:18325616) |
RGD |
PMID:18325616 |
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NCBI chr 6:128,388,084...128,453,234
Ensembl chr 6:128,388,053...128,434,183
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G |
Dicer1 |
dicer 1 ribonuclease III |
involved_in |
ISO |
(PMID:19701182) |
RGD |
PMID:19701182 |
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NCBI chr 6:128,388,084...128,453,234
Ensembl chr 6:128,388,053...128,434,183
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G |
Mtfmt |
mitochondrial methionyl-tRNA formyltransferase |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 8:70,952,209...70,986,393
Ensembl chr 8:70,952,203...70,986,408
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G |
Abt1 |
activator of basal transcription 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr17:43,946,118...43,948,224
Ensembl chr17:43,946,130...43,948,223
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G |
Fcf1 |
FCF1 rRNA-processing protein |
acts_upstream_of_or_within |
ISO |
(MGI:5617283|PMID:25190460) |
RGD |
PMID:25190460 |
MGI:5617283 |
NCBI chr 6:108,796,182...108,808,051
Ensembl chr 6:108,796,182...108,808,048
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G |
Nop9 |
NOP9 nucleolar protein |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr15:34,431,357...34,439,861
Ensembl chr15:34,431,357...34,439,861
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G |
Rcl1 |
RNA terminal phosphate cyclase-like 1 |
acts_upstream_of_or_within |
ISO |
(MGI:5617283|PMID:25190460) |
RGD |
PMID:25190460 |
MGI:5617283 |
NCBI chr 1:247,228,012...247,272,369
Ensembl chr 1:247,228,061...247,305,693
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G |
Tbl3 |
transducin (beta)-like 3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr10:14,066,984...14,072,197
Ensembl chr10:14,066,948...14,072,230
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G |
Utp23 |
UTP23, small subunit processome component |
acts_upstream_of_or_within |
ISO |
(MGI:5617283|PMID:25190460) |
RGD |
PMID:25190460 |
MGI:5617283 |
NCBI chr 7:91,384,329...91,389,605
Ensembl chr 7:91,384,187...91,389,598
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G |
Abt1 |
activator of basal transcription 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr17:43,946,118...43,948,224
Ensembl chr17:43,946,130...43,948,223
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G |
AC135409.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr 8:50,604,768...50,605,053
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G |
AC141489.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr 5:159,606,647...159,606,989
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G |
Fcf1 |
FCF1 rRNA-processing protein |
acts_upstream_of_or_within |
ISO |
(MGI:5617283|PMID:25190460) |
RGD |
PMID:25190460 |
MGI:5617283 |
NCBI chr 6:108,796,182...108,808,051
Ensembl chr 6:108,796,182...108,808,048
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G |
Kri1 |
KRI1 homolog |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 8:22,301,025...22,317,049
Ensembl chr 8:22,301,498...22,315,339
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G |
Nop9 |
NOP9 nucleolar protein |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr15:34,431,357...34,439,861
Ensembl chr15:34,431,357...34,439,861
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G |
Rcl1 |
RNA terminal phosphate cyclase-like 1 |
acts_upstream_of_or_within |
ISO |
(MGI:5617283|PMID:25190460) |
RGD |
PMID:25190460 |
MGI:5617283 |
NCBI chr 1:247,228,012...247,272,369
Ensembl chr 1:247,228,061...247,305,693
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G |
Rpp40 |
ribonuclease P/MRP subunit p40 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr17:29,638,647...29,647,709
Ensembl chr17:29,638,677...29,647,763
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G |
Rps21 |
ribosomal protein S21 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 3:175,629,176...175,630,198
Ensembl chr 3:175,629,374...175,630,048
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G |
Rps21-ps1 |
ribosomal protein S21, pseudogene 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 5:159,606,647...159,606,990
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G |
Rrs1 |
ribosome biogenesis regulator 1 homolog |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 5:9,430,710...9,432,343
Ensembl chr 5:9,430,728...9,432,343
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Rpp40 |
ribonuclease P/MRP subunit p40 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr17:29,638,647...29,647,709
Ensembl chr17:29,638,677...29,647,763
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G |
Bms1 |
BMS1 ribosome biogenesis factor |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 4:150,433,567...150,471,783
Ensembl chr 4:150,433,570...150,471,834
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G |
Rcl1 |
RNA terminal phosphate cyclase-like 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 1:247,228,012...247,272,369
Ensembl chr 1:247,228,061...247,305,693
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G |
Tsr1 |
TSR1, ribosome maturation factor |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr10:61,746,070...61,757,518
Ensembl chr10:61,746,059...61,757,518
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G |
AC135409.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr 8:50,604,768...50,605,053
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G |
AC141489.1 |
|
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr 5:159,606,647...159,606,989
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G |
Rps21 |
ribosomal protein S21 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 3:175,629,176...175,630,198
Ensembl chr 3:175,629,374...175,630,048
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G |
Rps21-ps1 |
ribosomal protein S21, pseudogene 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 5:159,606,647...159,606,990
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G |
Abt1 |
activator of basal transcription 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr17:43,946,118...43,948,224
Ensembl chr17:43,946,130...43,948,223
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G |
Nop9 |
NOP9 nucleolar protein |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr15:34,431,357...34,439,861
Ensembl chr15:34,431,357...34,439,861
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G |
Tbl3 |
transducin (beta)-like 3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr10:14,066,984...14,072,197
Ensembl chr10:14,066,948...14,072,230
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Ftsj3 |
FtsJ RNA 2'-O-methyltransferase 3 |
involved_in |
IEA |
GO_REF:0000104 |
UniProt |
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GO_REF:0000104 |
NCBI chr10:94,439,059...94,445,503
Ensembl chr10:94,439,077...94,445,503
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Dkc1 |
dyskerin pseudouridine synthase 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:25219674) |
UniProt RGD |
PMID:25219674 |
GO_REF:0000024 |
NCBI chr X:155,844,914...155,862,363
Ensembl chr X:155,844,857...155,862,475
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G |
LOC100911166 |
RNA pseudouridylate synthase domain-containing protein 2-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 3:112,519,789...112,524,281
Ensembl chr 3:112,519,808...112,525,575
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Rpusd1 |
RNA pseudouridine synthase domain containing 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr10:15,099,104...15,102,968
Ensembl chr10:15,099,009...15,102,960
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G |
Rpusd2 |
RNA pseudouridine synthase domain containing 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 3:110,835,654...110,840,903
Ensembl chr 3:110,835,683...110,840,068
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G |
Rpusd3 |
RNA pseudouridine synthase D3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 4:145,361,937...145,370,992
Ensembl chr 4:145,366,765...145,370,992
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G |
Rpusd4 |
RNA pseudouridine synthase D4 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 8:36,467,706...36,477,190
Ensembl chr 8:36,467,706...36,477,189
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G |
Tsr3 |
TSR3 ribosome maturation factor |
involved_in |
ISO |
(PMID:27084949) |
RGD |
PMID:27084949 |
|
NCBI chr10:14,598,014...14,600,576
Ensembl chr10:14,598,014...14,600,576
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Eri1 |
exoribonuclease 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr16:60,307,148...60,327,237
Ensembl chr16:60,307,148...60,327,236
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Eri2 |
ERI1 exoribonuclease family member 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 1:189,540,145...189,549,891
Ensembl chr 1:189,540,145...189,549,891
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Eri3 |
ERI1 exoribonuclease family member 3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 5:136,406,009...136,533,408
Ensembl chr 5:136,406,130...136,533,389
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G |
Exosc10 |
exosome component 10 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 5:165,374,964...165,398,195
Ensembl chr 5:165,374,951...165,398,217
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G |
Exosc2 |
exosome component 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 3:10,151,734...10,161,997
Ensembl chr 3:10,151,284...10,161,989
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G |
Exosc3 |
exosome component 3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 5:60,866,498...60,871,734
Ensembl chr 5:60,868,502...60,871,705
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G |
Exosc7 |
exosome component 7 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 8:132,204,628...132,229,968
Ensembl chr 8:132,204,604...132,229,969
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G |
Exosc8 |
exosome component 8 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 2:143,925,643...143,932,240
Ensembl chr 2:143,925,546...143,931,940
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G |
Exosc9 |
exosome component 9 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 2:123,264,679...123,275,623
Ensembl chr 2:123,264,694...123,294,880
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G |
AABR07024964.1 |
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involved_in |
IEA |
GO_REF:0000104 |
UniProt |
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GO_REF:0000104 |
Ensembl chr16:22,851,465...22,853,022
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G |
Prpf19 |
pre-mRNA processing factor 19 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 1:226,947,065...226,958,147
Ensembl chr 1:226,947,105...226,958,144
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G |
Xab2 |
XPA binding protein 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr12:2,158,391...2,170,397
Ensembl chr12:2,158,389...2,170,504
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G |
Yju2 |
YJU2 splicing factor homolog |
involved_in |
IEA |
GO_REF:0000104 |
UniProt |
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GO_REF:0000104 |
NCBI chr 9:11,098,914...11,108,806
Ensembl chr 9:11,098,924...11,108,741
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Isy1 |
ISY1 splicing factor homolog |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 4:119,721,659...119,742,349
Ensembl chr 4:119,721,660...119,742,349
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G |
Prpf18 |
pre-mRNA processing factor 18 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr17:77,601,914...77,632,507
Ensembl chr17:77,601,877...77,663,980
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G |
AABR07052587.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr 3:64,190,973...64,191,878
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G |
AABR07064102.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr 6:64,649,194...64,649,586
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G |
AABR07064998.2 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr 6:103,807,218...103,807,838
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G |
AABR07065012.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr 6:103,948,796...103,949,275
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G |
AABR07065013.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr 6:103,958,380...103,958,859
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G |
C1d |
C1D nuclear receptor corepressor |
involved_in |
ISO IBA |
(PMID:17412707) PMID:21873635 |
RGD |
PMID:17412707, PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr14:100,415,645...100,427,878
Ensembl chr14:100,415,668...100,427,260
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G |
Eif6 |
eukaryotic translation initiation factor 6 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 3:151,356,867...151,363,201
Ensembl chr 3:151,356,868...151,363,115
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G |
Exosc10 |
exosome component 10 |
involved_in |
ISO |
(PMID:17412707), (PMID:20368444) |
RGD |
PMID:17412707 PMID:20368444 |
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NCBI chr 5:165,374,964...165,398,195
Ensembl chr 5:165,374,951...165,398,217
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G |
Exosc4 |
exosome component 4 |
involved_in |
ISO |
(PMID:20368444) |
RGD |
PMID:20368444 |
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NCBI chr 7:117,390,302...117,393,044
Ensembl chr 7:117,390,285...117,393,719
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G |
Las1l |
LAS1-like, ribosome biogenesis factor |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr X:65,081,591...65,102,344
Ensembl chr X:65,081,591...65,102,380
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G |
Mak16 |
MAK16 homolog |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr16:64,729,254...64,737,807
Ensembl chr16:64,729,221...64,737,807
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Mphosph6 |
M phase phosphoprotein 6 |
involved_in |
ISO IBA |
(PMID:17412707) PMID:21873635 |
RGD |
PMID:17412707, PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr19:50,357,314...50,367,137
Ensembl chr19:50,357,338...50,367,187
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G |
Mtrex |
Mtr4 exosome RNA helicase |
involved_in |
ISO IBA |
(PMID:17412707) PMID:21873635 |
RGD |
PMID:17412707, PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 2:44,726,716...44,787,013
Ensembl chr 2:44,717,781...44,786,963
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Nol9 |
nucleolar protein 9 |
involved_in |
ISO |
(PMID:21063389) |
RGD |
PMID:21063389 |
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NCBI chr 5:169,213,076...169,233,173
Ensembl chr 5:169,213,115...169,230,141
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G |
Nsa2 |
NSA2 ribosome biogenesis factor |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 2:27,942,546...27,949,089
Ensembl chr 2:27,942,546...27,949,089
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G |
Prkdc |
protein kinase, DNA-activated, catalytic subunit |
involved_in |
ISO |
(PMID:32103174) |
RGD |
PMID:32103174 |
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NCBI chr11:89,293,547...89,510,948
Ensembl chr11:89,293,696...89,510,871
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G |
Rpf1 |
ribosome production factor 1 homolog |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 2:252,368,316...252,382,838
Ensembl chr 2:252,368,329...252,382,955
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G |
Rrp15 |
ribosomal RNA processing 15 homolog |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr13:105,155,824...105,178,907
Ensembl chr13:105,155,441...105,179,095
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G |
Ftsj3 |
FtsJ RNA 2'-O-methyltransferase 3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr10:94,439,059...94,445,503
Ensembl chr10:94,439,077...94,445,503
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G |
Pes1 |
pescadillo ribosomal biogenesis factor 1 |
involved_in |
ISO ISS |
(PMID:16738141) GO_REF:0000024 |
RGD UniProt |
PMID:16738141 |
GO_REF:0000024 |
NCBI chr14:84,211,600...84,227,980
Ensembl chr14:84,211,600...84,227,978
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G |
Urb1 |
URB1 ribosome biogenesis homolog |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr11:30,916,740...30,977,423
Ensembl chr11:30,916,730...30,977,483
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Wdr12 |
WD repeat domain 12 |
involved_in |
ISO IBA ISS |
(PMID:16043514) PMID:21873635 GO_REF:0000024 |
RGD UniProt |
PMID:16043514, PMID:21873635, PMID:21873635 |
GO_REF:0000024, RGD:13792537, RGD:13792537 |
NCBI chr 9:66,851,499...66,878,534
Ensembl chr 9:66,851,940...66,877,972
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Sart1 |
spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 1:220,762,496...220,771,158
Ensembl chr 1:220,762,349...220,771,181
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G |
AABR07007121.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr 1:282,063,929...282,064,741
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G |
AABR07018167.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr15:44,672,965...44,673,765
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G |
AABR07027819.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr17:45,286,135...45,286,923
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G |
AABR07029262.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr10:18,636,485...18,637,285
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G |
AABR07030630.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr10:96,661,696...96,662,166
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G |
AABR07042323.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr X:152,781,188...152,781,574
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G |
AABR07045321.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr20:42,842,233...42,843,033
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G |
AABR07049918.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr 5:144,927,759...144,928,559
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G |
AABR07052519.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr 3:59,165,353...59,166,356
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G |
AABR07052587.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr 3:64,190,973...64,191,878
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G |
AABR07054456.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr 3:154,437,571...154,438,322
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G |
AABR07057586.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr 7:79,138,925...79,139,725
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G |
AC094246.2 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr 1:255,710,658...255,711,417
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G |
AC128901.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr 4:147,121,260...147,122,060
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G |
Eif6 |
eukaryotic translation initiation factor 6 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 3:151,356,867...151,363,201
Ensembl chr 3:151,356,868...151,363,115
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G |
Las1l |
LAS1-like, ribosome biogenesis factor |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr X:65,081,591...65,102,344
Ensembl chr X:65,081,591...65,102,380
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G |
LOC100359574 |
NHP2 non-histone chromosome protein 2-like 1-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 1:281,863,115...281,864,546
Ensembl chr 1:281,863,918...281,864,304 Ensembl chr 7:281,863,918...281,864,304
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LOC100359687 |
mitochondrial ribosomal protein L1-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 8:56,411,909...56,502,073
Ensembl chr 8:56,411,911...56,502,069
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LOC102547076 |
60S ribosomal protein L7a-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr10:18,636,358...18,637,285
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LOC103690013 |
H/ACA ribonucleoprotein complex subunit 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr10:37,069,387...37,072,758
Ensembl chr10:37,069,344...37,072,733
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LOC103690888 |
60S ribosomal protein L10a-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr X:112,555,128...112,555,864
Ensembl chr X:112,555,173...112,555,826
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G |
LOC108348298 |
ribosomal L1 domain-containing protein 1-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr10:4,487,809...4,499,727
Ensembl chr10:4,487,882...4,499,230
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LOC108349080 |
60S ribosomal protein L7a pseudogene |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr20:42,842,233...42,843,033
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G |
LOC108349606 |
60S ribosomal protein L7a-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 1:166,282,044...166,282,845
Ensembl chr18:4,371,051...4,371,899
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LOC680700 |
similar to ribosomal protein L10a |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 5:139,933,423...139,933,794
Ensembl chr 5:139,932,988...139,933,764
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Mak16 |
MAK16 homolog |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr16:64,729,254...64,737,807
Ensembl chr16:64,729,221...64,737,807
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Mrpl1 |
mitochondrial ribosomal protein L1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr14:14,951,507...15,008,136
Ensembl chr14:14,951,495...15,008,150
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Nhp2 |
NHP2 ribonucleoprotein |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr10:34,975,701...34,979,082
Ensembl chr10:34,975,708...34,979,082
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Nop2 |
NOP2 nucleolar protein |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 4:157,646,759...157,658,502
Ensembl chr 4:157,647,082...157,658,390
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G |
Nsa2 |
NSA2 ribosome biogenesis factor |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 2:27,942,546...27,949,089
Ensembl chr 2:27,942,546...27,949,089
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G |
RGD1566078 |
similar to NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) (Sperm specific antigen 1) |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr X:152,781,177...152,781,621
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G |
Rpf1 |
ribosome production factor 1 homolog |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 2:252,368,316...252,382,838
Ensembl chr 2:252,368,329...252,382,955
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Rpl10a |
ribosomal protein L10A |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr20:7,908,309...7,910,867
Ensembl chr20:7,908,304...7,910,867
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Rpl7a |
ribosomal protein L7a |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 3:5,458,985...5,461,627
Ensembl chr 3:5,459,160...5,461,583 Ensembl chr 3:5,459,160...5,461,583
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G |
Rrp15 |
ribosomal RNA processing 15 homolog |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr13:105,155,824...105,178,907
Ensembl chr13:105,155,441...105,179,095
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G |
Rsl1d1 |
ribosomal L1 domain containing 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr10:4,375,329...4,387,195
Ensembl chr10:4,356,915...4,390,030
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G |
Rsl1d1l1 |
ribosomal L1 domain containing 1-like 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr10:4,447,239...4,459,125
Ensembl chr10:4,487,882...4,499,230 Ensembl chr10:4,487,882...4,499,230
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Snu13 |
small nuclear ribonucleoprotein 13 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 7:123,282,754...123,287,721
Ensembl chr 7:123,282,754...123,287,721
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AABR07013798.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr 2:257,295,193...257,295,534
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G |
AABR07030263.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr10:78,416,946...78,417,317
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G |
AABR07031666.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr18:24,312,582...24,312,950
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G |
AABR07037343.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr X:18,998,532...18,998,885
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G |
AABR07063704.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr 6:42,947,334...42,947,705
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G |
AABR07073381.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr 8:33,345,014...33,345,379
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G |
AC103056.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr 1:255,801,694...255,802,172
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AC121415.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr 2:178,212,156...178,212,785
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Bop1 |
BOP1 ribosomal biogenesis factor |
involved_in |
ISO ISS IBA |
(PMID:17353269) GO_REF:0000024 PMID:21873635 |
RGD UniProt |
PMID:17353269, PMID:21873635, PMID:21873635 |
GO_REF:0000024, RGD:13792537, RGD:13792537 |
NCBI chr 7:117,514,529...117,538,342
Ensembl chr 7:117,514,533...117,538,342
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Ddx18 |
DEAD-box helicase 18 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr13:37,522,558...37,536,066
Ensembl chr13:37,522,561...37,536,066
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Ftsj3 |
FtsJ RNA 2'-O-methyltransferase 3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr10:94,439,059...94,445,503
Ensembl chr10:94,439,077...94,445,503
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Gtpbp4 |
GTP binding protein 4 |
acts_upstream_of_or_within involved_in |
ISO IEA |
(MGI:5617283|PMID:25190460) GO_REF:0000107 |
RGD Ensembl |
PMID:25190460 |
GO_REF:0000107 MGI:5617283 |
NCBI chr17:63,111,086...63,145,618
Ensembl chr17:63,110,254...63,145,577
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LOC365827 |
similar to 60S ribosomal protein L7 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 2:178,212,078...178,213,029
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LOC367050 |
similar to 60S ribosomal protein L35 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 8:33,344,951...33,345,463
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LOC686074 |
similar to 60S ribosomal protein L35 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr18:24,312,539...24,312,985
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Nifk |
nucleolar protein interacting with the FHA domain of MKI67 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr13:34,267,442...34,277,543
Ensembl chr13:34,267,471...34,277,530
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Pes1 |
pescadillo ribosomal biogenesis factor 1 |
acts_upstream_of_or_within involved_in |
ISS ISO IBA |
GO_REF:0000024 (MGI:5617283|PMID:25190460) (PMID:16738141), (PMID:17353269) PMID:21873635 |
UniProt RGD |
PMID:16738141 PMID:17353269 PMID:25190460, PMID:21873635, PMID:21873635 |
GO_REF:0000024 MGI:5617283, RGD:13792537, RGD:13792537 |
NCBI chr14:84,211,600...84,227,980
Ensembl chr14:84,211,600...84,227,978
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RGD1562863 |
similar to 60S ribosomal protein L35 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr X:18,998,488...18,999,101
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RGD1563157 |
similar to 60S ribosomal protein L35 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 6:42,947,334...42,947,705
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Rpf2 |
ribosome production factor 2 homolog |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr20:45,321,381...45,342,865
Ensembl chr20:45,321,405...45,342,948
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Rpl35 |
ribosomal protein L35 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 3:23,294,813...23,297,774
Ensembl chr 3:23,294,814...23,297,774
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Rpl7 |
ribosomal protein L7 |
involved_in |
IBA IEA |
PMID:21873635 GO_REF:0000002 |
InterPro |
PMID:21873635, PMID:21873635 |
GO_REF:0000002, RGD:13792537, RGD:13792537 |
NCBI chr 5:2,633,517...2,636,525
Ensembl chr 5:2,632,712...2,640,021
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Rpl7l1 |
ribosomal protein L7-like 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 9:16,508,477...16,516,502
Ensembl chr 9:16,508,799...16,513,120
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Urb1 |
URB1 ribosome biogenesis homolog |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr11:30,916,740...30,977,423
Ensembl chr11:30,916,730...30,977,483
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Wdr12 |
WD repeat domain 12 |
involved_in |
ISS IBA ISO |
GO_REF:0000024 PMID:21873635 (PMID:16043514), (PMID:17353269) |
UniProt RGD |
PMID:16043514 PMID:17353269, PMID:21873635, PMID:21873635 |
GO_REF:0000024, RGD:13792537, RGD:13792537 |
NCBI chr 9:66,851,499...66,878,534
Ensembl chr 9:66,851,940...66,877,972
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Znhit3 |
zinc finger, HIT-type containing 3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr10:72,227,710...72,235,932
Ensembl chr10:72,228,222...72,235,888
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Znhit6 |
zinc finger, HIT-type containing 6 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 2:251,453,503...251,484,760
Ensembl chr 2:251,453,644...251,484,759
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G |
AABR07042323.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr X:152,781,188...152,781,574
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G |
Ddx52 |
DExD-box helicase 52 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr10:71,253,667...71,276,397
Ensembl chr10:71,253,598...71,277,277
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LOC100359503 |
ribosomal protein S28-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr16:70,644,459...70,644,750
Ensembl chr16:70,644,474...70,644,683
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G |
LOC100359574 |
NHP2 non-histone chromosome protein 2-like 1-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 1:281,863,115...281,864,546
Ensembl chr 1:281,863,918...281,864,304 Ensembl chr 7:281,863,918...281,864,304
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LOC100360750 |
Sm protein F-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr13:47,380,376...47,382,933
Ensembl chr13:47,380,406...47,382,955 Ensembl chr19:47,380,406...47,382,955
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G |
LOC108353424 |
40S ribosomal protein S28 pseudogene |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
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Lsm6 |
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr19:32,770,640...32,785,215
Ensembl chr19:32,770,655...32,785,215
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Nob1 |
NIN1 (RPN12) binding protein 1 homolog |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr19:38,397,466...38,409,924
Ensembl chr19:38,397,466...38,409,924
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G |
Nol11 |
nucleolar protein 11 |
involved_in |
ISO IBA |
(PMID:22916032) PMID:21873635 |
RGD |
PMID:22916032, PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr10:95,388,223...95,408,053
Ensembl chr10:95,388,888...95,407,997
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Nop14 |
NOP14 nucleolar protein |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr14:81,340,141...81,361,277
Ensembl chr14:81,340,041...81,362,441
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G |
RGD1566078 |
similar to NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) (Sperm specific antigen 1) |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr X:152,781,177...152,781,621
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Riok1 |
RIO kinase 1 |
involved_in |
ISO IBA |
(PMID:22072790) PMID:21873635 |
RGD |
PMID:22072790, PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr17:27,429,421...27,452,353
Ensembl chr17:27,429,416...27,452,314
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G |
Riok2 |
RIO kinase 2 |
involved_in |
ISO IBA |
(PMID:19564402) PMID:21873635 |
RGD |
PMID:19564402, PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 1:59,130,008...59,146,457
Ensembl chr 1:59,129,951...59,146,776
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Riok3 |
RIO kinase 3 |
involved_in |
ISO IBA |
(PMID:22418843) PMID:21873635 |
RGD |
PMID:22418843, PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr18:3,565,166...3,590,739
Ensembl chr18:3,565,166...3,590,739
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G |
Rps14 |
ribosomal protein S14 |
involved_in |
ISS |
GO_REF:0000024 |
UniProt |
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GO_REF:0000024 |
NCBI chr18:56,042,532...56,047,316
Ensembl chr18:56,044,369...56,047,316
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G |
Rps19 |
ribosomal protein S19 |
involved_in |
ISO |
(PMID:16990592), (PMID:17053056) |
RGD |
PMID:16990592 PMID:17053056 |
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NCBI chr 1:81,750,873...81,756,629
Ensembl chr 1:81,750,928...81,756,627
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Rps28 |
ribosomal protein S28 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 7:18,682,071...18,683,440
Ensembl chr 7:18,682,071...18,683,440
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G |
Snu13 |
small nuclear ribonucleoprotein 13 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 7:123,282,754...123,287,721
Ensembl chr 7:123,282,754...123,287,721
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G |
Srfbp1 |
serum response factor binding protein 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr18:47,456,406...47,478,967
Ensembl chr18:47,456,327...47,480,587
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G |
Tsr3 |
TSR3 ribosome maturation factor |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr10:14,598,014...14,600,576
Ensembl chr10:14,598,014...14,600,576
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Utp4 |
UTP4 small subunit processome component |
involved_in |
ISO |
(PMID:22916032) |
RGD |
PMID:22916032 |
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NCBI chr19:39,087,995...39,116,124
Ensembl chr19:39,087,990...39,116,125
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G |
Wdr3 |
WD repeat domain 3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 2:202,447,749...202,470,398
Ensembl chr 2:202,447,745...202,470,399
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G |
AABR07005506.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr 1:183,629,450...183,630,695
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G |
AABR07019341.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr15:100,303,346...100,303,807
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G |
AABR07021945.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr13:99,981,052...99,982,358
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G |
AABR07051796.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr 3:21,983,841...21,984,332
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G |
AABR07053635.2 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr 3:117,853,999...117,854,481
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G |
AABR07056611.1 |
|
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr 7:32,193,086...32,193,418
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G |
Bms1 |
BMS1 ribosome biogenesis factor |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 4:150,433,567...150,471,783
Ensembl chr 4:150,433,570...150,471,834
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G |
Bysl |
bystin-like |
acts_upstream_of_or_within involved_in |
IEA ISO |
GO_REF:0000107 (MGI:3700849|PMID:17242206) |
Ensembl RGD |
PMID:17242206 |
GO_REF:0000107 MGI:3700849 |
NCBI chr 9:15,393,461...15,403,212
Ensembl chr 9:15,393,330...15,403,117
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G |
Dcaf13 |
DDB1 and CUL4 associated factor 13 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 7:78,005,232...78,040,220
Ensembl chr 7:78,005,232...78,040,214
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G |
Dhx37 |
DEAH-box helicase 37 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr12:36,594,058...36,614,165
Ensembl chr12:36,594,047...36,614,210
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Ercc2 |
ERCC excision repair 2, TFIIH core complex helicase subunit |
acts_upstream_of_or_within |
ISO |
MGI:2183949 (MGI:5496981|PMID:23562818) |
RGD |
PMID:23562818 |
MGI:5496981 |
NCBI chr 1:80,293,574...80,307,334
Ensembl chr 1:80,293,566...80,307,344
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Fam207a |
family with sequence similarity 207, member A |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr20:11,863,145...11,896,833
Ensembl chr20:11,863,082...11,896,774
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G |
Gtf2h5 |
general transcription factor IIH subunit 5 |
acts_upstream_of_or_within |
ISO |
MGI:5514340 (MGI:5496981|PMID:23562818) |
RGD |
PMID:23562818 |
MGI:5496981 |
NCBI chr 1:46,978,345...46,985,032
Ensembl chr 1:46,978,458...46,985,032
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G |
Heatr1 |
HEAT repeat containing 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr17:66,446,135...66,488,303
Ensembl chr17:66,446,162...66,619,250
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G |
Helb |
DNA helicase B |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 7:64,860,641...64,888,146
Ensembl chr 7:64,860,666...64,887,448
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G |
LOC100363452 |
ribosomal protein S8-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 3:103,192,670...103,193,343
Ensembl chr 3:103,192,683...103,193,333
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LOC100911847 |
40S ribosomal protein S14-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 5:144,083,030...144,083,602
Ensembl chr18:56,044,369...56,047,316
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LOC102548369 |
40S ribosomal protein S16-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr15:100,303,331...100,303,838
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LOC108348069 |
HEAT repeat-containing protein 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr17:66,578,885...66,619,465
Ensembl chr17:66,446,162...66,619,250
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LOC297756 |
ribosomal protein S8-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 5:2,799,565...2,803,855
Ensembl chr 5:2,799,565...2,803,855
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Mrps11 |
mitochondrial ribosomal protein S11 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 1:140,477,645...140,487,249
Ensembl chr 1:140,477,868...140,487,248
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NEWGENE_1562416 |
TSR2, ribosome maturation factor |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr X:20,224,112...20,232,647
Ensembl chr X:20,144,432...20,232,639
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Ngdn |
neuroguidin |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr15:33,677,333...33,684,840
Ensembl chr15:33,677,597...33,684,840
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Nol10 |
nucleolar protein 10 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 6:42,656,661...42,745,099
Ensembl chr 6:42,656,616...42,745,098
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Pwp2 |
PWP2, small subunit processome component |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr20:11,228,892...11,243,204
Ensembl chr20:11,228,844...11,243,205
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RGD1561137 |
similar to 40S ribosomal protein S16 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 3:21,983,880...21,984,383
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RGD1566369 |
similar to ribosomal protein S8 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr17:88,139,926...88,156,732
Ensembl chr17:88,139,962...88,140,588
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Rps14 |
ribosomal protein S14 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr18:56,042,532...56,047,316
Ensembl chr18:56,044,369...56,047,316
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Rps16 |
ribosomal protein S16 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 1:85,405,499...85,408,444
Ensembl chr 1:85,405,512...85,408,444
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Rps19 |
ribosomal protein S19 |
involved_in |
ISO |
(PMID:16990592), (PMID:17053056) |
RGD |
PMID:16990592 PMID:17053056 |
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NCBI chr 1:81,750,873...81,756,629
Ensembl chr 1:81,750,928...81,756,627
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Rps8 |
ribosomal protein S8 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 5:136,020,941...136,023,511
Ensembl chr 5:136,020,941...136,023,511
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Rrp36 |
ribosomal RNA processing 36 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 9:16,618,853...16,627,128
Ensembl chr 9:16,619,040...16,625,609
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Tsr1 |
TSR1, ribosome maturation factor |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr10:61,746,070...61,757,518
Ensembl chr10:61,746,059...61,757,518
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Tsr2 |
TSR2, ribosome maturation factor |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr X:20,141,406...20,146,082
Ensembl chr X:20,144,432...20,232,639
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Utp25 |
UTP25, small subunit processor component |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr13:111,828,052...111,849,654
Ensembl chr13:111,828,043...111,849,653
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Utp3 |
UTP3, small subunit processome component |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr14:21,153,998...21,155,652
Ensembl chr14:21,154,000...21,155,652
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Utp4 |
UTP4 small subunit processome component |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr19:39,087,995...39,116,124
Ensembl chr19:39,087,990...39,116,125
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Utp6 |
UTP6 small subunit processome component |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr10:67,255,177...67,285,754
Ensembl chr10:67,257,161...67,285,617
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Wdr46 |
WD repeat domain 46 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr20:5,447,860...5,455,632
Ensembl chr20:5,447,860...5,455,632
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Pnpt1 |
polyribonucleotide nucleotidyltransferase 1 |
involved_in |
ISO |
(PMID:18083837) |
RGD |
PMID:18083837 |
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NCBI chr14:113,530,470...113,561,645
Ensembl chr14:113,530,470...113,561,645
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Tbrg4 |
transforming growth factor beta regulator 4 |
involved_in |
ISO ISS |
(PMID:28335001) GO_REF:0000024 |
RGD UniProt |
PMID:28335001 |
GO_REF:0000024 |
NCBI chr14:86,876,800...86,885,603
Ensembl chr14:86,877,627...86,885,584
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Pnpt1 |
polyribonucleotide nucleotidyltransferase 1 |
involved_in |
ISO IBA |
(PMID:18083837) PMID:21873635 |
RGD |
PMID:18083837, PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr14:113,530,470...113,561,645
Ensembl chr14:113,530,470...113,561,645
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Supv3l1 |
Suv3 like RNA helicase |
involved_in |
IEA IBA ISO ISS |
GO_REF:0000107 PMID:21873635 (PMID:19864255) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:19864255, PMID:21873635, PMID:21873635 |
GO_REF:0000024 GO_REF:0000107, RGD:13792537, RGD:13792537 |
NCBI chr20:32,057,530...32,080,170
Ensembl chr20:32,057,454...32,080,088
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Pnpt1 |
polyribonucleotide nucleotidyltransferase 1 |
involved_in |
ISO |
(PMID:18083837) |
RGD |
PMID:18083837 |
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NCBI chr14:113,530,470...113,561,645
Ensembl chr14:113,530,470...113,561,645
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Trmt10c |
tRNA methyltransferase 10C, mitochondrial RNase P subunit |
involved_in |
ISO ISS |
(PMID:21593607) GO_REF:0000024 |
RGD UniProt |
PMID:21593607 |
GO_REF:0000024 |
NCBI chr11:47,047,342...47,052,420
Ensembl chr11:47,047,342...47,052,418
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Fastkd5 |
FAST kinase domains 5 |
involved_in |
ISO |
(PMID:25683715) |
RGD |
PMID:25683715 |
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NCBI chr 3:123,154,263...123,170,615
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Hsd17b10 |
hydroxysteroid (17-beta) dehydrogenase 10 |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (PMID:29040705) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:29040705 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr X:21,696,796...21,699,241
Ensembl chr X:21,696,772...21,699,241
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Trmt10c |
tRNA methyltransferase 10C, mitochondrial RNase P subunit |
involved_in |
ISO |
(PMID:29040705) |
RGD |
PMID:29040705 |
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NCBI chr11:47,047,342...47,052,420
Ensembl chr11:47,047,342...47,052,418
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Trnt1 |
tRNA nucleotidyl transferase 1 |
involved_in |
ISO |
(PMID:11504732) |
RGD |
PMID:11504732 |
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NCBI chr 4:138,855,497...138,869,217
Ensembl chr 4:138,855,641...138,869,217
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Elac2 |
elaC ribonuclease Z 2 |
involved_in |
IEA ISS ISO IBA |
GO_REF:0000107 GO_REF:0000024 (PMID:21593607) PMID:21873635 |
Ensembl UniProt RGD |
PMID:21593607, PMID:21873635, PMID:21873635 |
GO_REF:0000024 GO_REF:0000107, RGD:13792537, RGD:13792537 |
NCBI chr10:51,478,378...51,501,167
Ensembl chr10:51,478,378...51,501,165
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Hsd17b10 |
hydroxysteroid (17-beta) dehydrogenase 10 |
involved_in |
IEA ISS ISO |
GO_REF:0000107 GO_REF:0000024 (PMID:24549042), (PMID:25925575), (PMID:28888424), (PMID:29040705) |
Ensembl UniProt RGD |
PMID:24549042 PMID:25925575 PMID:28888424 PMID:29040705 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr X:21,696,796...21,699,241
Ensembl chr X:21,696,772...21,699,241
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Prorp |
protein only RNase P catalytic subunit |
involved_in |
ISO ISS IBA |
(PMID:25953853) GO_REF:0000024 PMID:21873635 |
RGD UniProt |
PMID:25953853, PMID:21873635, PMID:21873635 |
GO_REF:0000024, RGD:13792537, RGD:13792537 |
NCBI chr 6:76,079,880...76,171,298
Ensembl chr 6:76,079,880...76,171,296
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Trmt10c |
tRNA methyltransferase 10C, mitochondrial RNase P subunit |
involved_in |
ISO ISS |
(PMID:29040705) GO_REF:0000024 |
RGD UniProt |
PMID:29040705 |
GO_REF:0000024 |
NCBI chr11:47,047,342...47,052,420
Ensembl chr11:47,047,342...47,052,418
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Hsd17b10 |
hydroxysteroid (17-beta) dehydrogenase 10 |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (PMID:25925575), (PMID:28888424) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:25925575 PMID:28888424 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr X:21,696,796...21,699,241
Ensembl chr X:21,696,772...21,699,241
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Trmt5 |
tRNA methyltransferase 5 |
involved_in |
ISO IBA |
(PMID:26189817) PMID:21873635 |
RGD |
PMID:26189817, PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 6:96,164,579...96,171,680
Ensembl chr 6:96,153,014...96,171,779
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Cdk5rap1 |
CDK5 regulatory subunit associated protein 1 |
acts_upstream_of_or_within |
ISO |
MGI:5750452 (MGI:5635958|PMID:25738458) |
RGD |
PMID:25738458 |
MGI:5635958 |
NCBI chr 3:149,835,953...149,870,429
Ensembl chr 3:149,703,848...149,870,413
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Trmt10a |
tRNA methyltransferase 10A |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 2:243,422,811...243,437,533
Ensembl chr 2:243,422,811...243,438,050
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Trmt10b |
tRNA methyltransferase 10B |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 5:60,841,517...60,866,480
Ensembl chr 5:60,850,852...60,865,207
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Trmt10c |
tRNA methyltransferase 10C, mitochondrial RNase P subunit |
involved_in |
ISO ISS IBA |
(PMID:27132592) GO_REF:0000024 PMID:21873635 |
RGD UniProt |
PMID:27132592, PMID:21873635, PMID:21873635 |
GO_REF:0000024, RGD:13792537, RGD:13792537 |
NCBI chr11:47,047,342...47,052,420
Ensembl chr11:47,047,342...47,052,418
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Rpusd4 |
RNA pseudouridine synthase D4 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:28082677) |
Ensembl RGD |
PMID:28082677 |
GO_REF:0000107 |
NCBI chr 8:36,467,706...36,477,190
Ensembl chr 8:36,467,706...36,477,189
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Mto1 |
mitochondrial tRNA translation optimization 1 |
acts_upstream_of_or_within involved_in |
ISO IBA |
SGD:S000003205 (MGI:2677576|PMID:14522080) PMID:21873635 |
RGD |
PMID:14522080, PMID:21873635, PMID:21873635 |
MGI:2677576, RGD:13792537, RGD:13792537 |
NCBI chr 8:85,807,703...85,832,263
Ensembl chr 8:85,808,125...85,831,937
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Rprd1a |
regulation of nuclear pre-mRNA domain containing 1A |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr18:16,450,160...16,497,913
Ensembl chr18:16,453,369...16,497,886
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Rprd1b |
regulation of nuclear pre-mRNA domain containing 1B |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 3:154,507,029...154,553,312
Ensembl chr 3:154,507,035...154,553,312
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Rprd2 |
regulation of nuclear pre-mRNA domain containing 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 2:197,882,666...197,937,844
Ensembl chr 2:197,886,160...197,935,567
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Zc3h3 |
zinc finger CCCH type containing 3 |
acts_upstream_of_or_within |
ISO |
(MGI:3619747|PMID:16115198) |
RGD |
PMID:16115198 |
MGI:3619747 |
NCBI chr 7:116,787,762...116,872,536
Ensembl chr 7:116,787,766...116,872,511
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Cpsf2 |
cleavage and polyadenylation specific factor 2 |
involved_in |
ISO IBA |
(PMID:18688255) PMID:21873635 |
RGD |
PMID:18688255, PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 6:125,870,372...125,898,039
Ensembl chr 6:125,870,372...125,898,874
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Cpsf3 |
cleavage and polyadenylation specific factor 3 |
involved_in |
ISO IBA |
(PMID:18688255) (MGI:4418605|PMID:18955505) PMID:21873635 |
RGD |
PMID:18688255 PMID:18955505, PMID:21873635, PMID:21873635 |
MGI:4418605, RGD:13792537, RGD:13792537 |
NCBI chr 6:43,363,792...43,391,712
Ensembl chr 6:43,363,792...43,391,712
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LOC100363294 |
stem-loop binding protein-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr18:27,550,426...27,557,699
Ensembl chr18:27,554,062...27,557,699
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Lsm11 |
LSM11, U7 small nuclear RNA associated |
involved_in |
ISO IBA |
(MGI:2676509|PMID:12975319) PMID:21873635 |
RGD |
PMID:12975319, PMID:21873635, PMID:21873635 |
MGI:2676509, RGD:13792537, RGD:13792537 |
NCBI chr10:31,023,561...31,041,700
Ensembl chr10:31,028,697...31,041,626
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Slbp |
stem-loop binding protein |
involved_in |
ISO IBA |
(MGI:4353869|PMID:19470752) PMID:21873635 |
RGD |
PMID:19470752, PMID:21873635, PMID:21873635 |
MGI:4353869, RGD:13792537, RGD:13792537 |
NCBI chr14:82,356,916...82,366,368
Ensembl chr14:82,356,916...82,366,368
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Zfp473 |
zinc finger protein 473 |
involved_in |
ISO |
(PMID:16714279) |
RGD |
PMID:16714279 |
|
NCBI chr 1:100,736,319...100,755,498
Ensembl chr 1:100,736,243...100,746,021
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Isy1 |
ISY1 splicing factor homolog |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 4:119,721,659...119,742,349
Ensembl chr 4:119,721,660...119,742,349
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Slu7 |
SLU7 homolog, splicing factor |
involved_in |
ISO ISS |
(PMID:15728250) PMID:15181151 |
RGD |
PMID:15728250, PMID:15181151, PMID:15181151 |
RGD:1304333, RGD:1304333 |
NCBI chr10:29,029,556...29,044,919
Ensembl chr10:29,029,590...29,044,583
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Prpf39 |
pre-mRNA processing factor 39 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 6:86,785,793...86,810,806
Ensembl chr 6:86,785,771...86,810,316
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Psip1 |
PC4 and SFRS1 interacting protein 1 |
involved_in |
ISO IEA ISS |
(PMID:9885563) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:9885563 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 5:101,555,691...101,588,659
Ensembl chr 5:101,555,694...101,588,598
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Sfswap |
splicing factor SWAP |
acts_upstream_of_or_within involved_in |
IEA ISO IBA |
GO_REF:0000107 (MGI:84585|PMID:8940107) PMID:21873635 |
Ensembl RGD |
PMID:8940107, PMID:21873635, PMID:21873635 |
GO_REF:0000107 MGI:84585, RGD:13792537, RGD:13792537 |
NCBI chr12:30,740,563...30,811,015
Ensembl chr12:30,740,520...30,811,054
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Snrpc |
small nuclear ribonucleoprotein polypeptide C |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr20:7,409,401...7,427,581
Ensembl chr20:7,409,401...7,427,581
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G |
Srsf1 |
serine and arginine rich splicing factor 1 |
involved_in |
ISO |
(PMID:8940107), (PMID:9885563) |
RGD |
PMID:8940107 PMID:9885563 |
|
NCBI chr10:75,334,200...75,341,197
Ensembl chr10:75,335,146...75,341,197
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G |
Srsf12 |
serine and arginine rich splicing factor 12 |
involved_in |
ISO |
(PMID:11684676) |
RGD |
PMID:11684676 |
|
NCBI chr 5:48,456,777...48,484,017
Ensembl chr 5:48,456,757...48,485,912
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G |
Cpsf6 |
cleavage and polyadenylation specific factor 6 |
involved_in |
ISO |
(PMID:20695905), (PMID:23187700), (PMID:29276085) |
RGD |
PMID:20695905 PMID:23187700 PMID:29276085 |
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NCBI chr 7:60,385,688...60,417,661
Ensembl chr 7:60,385,688...60,416,925
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G |
Cpsf7 |
cleavage and polyadenylation specific factor 7 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:29276085) |
UniProt RGD |
PMID:29276085 |
GO_REF:0000024 |
NCBI chr 1:226,572,399...226,596,185
Ensembl chr 1:226,573,105...226,596,131
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G |
Nudt21 |
nudix hydrolase 21 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:17098938), (PMID:20695905), (PMID:23187700), (PMID:29276085) |
UniProt RGD |
PMID:17098938 PMID:20695905 PMID:23187700 PMID:29276085 |
GO_REF:0000024 |
NCBI chr19:11,451,366...11,470,637
Ensembl chr19:11,450,760...11,467,644
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G |
Virma |
vir like m6A methyltransferase associated |
involved_in |
ISO |
(PMID:29507755) |
RGD |
PMID:29507755 |
|
NCBI chr 5:25,042,743...25,121,403
Ensembl chr 5:25,042,710...25,120,264
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G |
Ythdc1 |
YTH domain containing 1 |
acts_upstream_of_or_within |
ISO IEA |
(MGI:6161521|PMID:29799838) GO_REF:0000107 |
RGD Ensembl |
PMID:29799838 |
GO_REF:0000107 MGI:6161521 |
NCBI chr14:22,971,834...23,002,326
Ensembl chr14:22,971,836...23,002,011
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G |
AABR07008904.1 |
|
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr 2:77,783,851...77,784,522
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G |
AABR07055789.1 |
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IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
Ensembl chr 7:10,064,414...10,068,532
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G |
Cactin |
cactin, spliceosome C complex subunit |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 7:11,258,526...11,266,509
Ensembl chr 7:11,261,201...11,266,630
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G |
Cwc15 |
CWC15 spliceosome-associated protein |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 8:12,994,131...13,004,958
Ensembl chr 8:12,994,155...13,004,957
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G |
Dcps |
decapping enzyme, scavenger |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (PMID:18426921) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:18426921 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 8:36,321,992...36,374,665
Ensembl chr 8:36,321,993...36,374,673
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G |
LOC310177 |
similar to RIKEN cDNA 0610040D20 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 2:77,783,788...77,784,626
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G |
Ncbp1 |
nuclear cap binding protein subunit 1 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 5:61,734,118...61,767,098
Ensembl chr 5:61,734,118...61,766,481
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G |
Ncbp2 |
nuclear cap binding protein subunit 2 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:18426921) |
UniProt RGD |
PMID:18426921 |
GO_REF:0000024 |
NCBI chr11:72,071,838...72,103,087
Ensembl chr11:72,921,282...72,929,003
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G |
Prpf40a |
pre-mRNA processing factor 40 homolog A |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 3:38,680,583...38,741,570
Ensembl chr 3:38,682,146...38,741,113
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G |
Prpf40b |
pre-mRNA processing factor 40 homolog B |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 7:140,958,952...140,981,588
Ensembl chr 7:140,967,282...140,981,583
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G |
Prpf4b |
pre-mRNA processing factor 4B |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr17:30,680,454...30,714,542
Ensembl chr17:30,683,640...30,714,495
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G |
Rbm19 |
RNA binding motif protein 19 |
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IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr12:41,907,978...41,993,969
Ensembl chr12:41,907,740...41,993,957
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G |
Rbm22 |
RNA binding motif protein 22 |
involved_in |
ISO ISS |
(PMID:22246180) GO_REF:0000024 |
RGD UniProt |
PMID:22246180 |
GO_REF:0000024 |
NCBI chr18:55,828,158...55,839,421
Ensembl chr18:55,828,158...55,838,966
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G |
Rbm4b |
RNA binding motif protein 4B |
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IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 1:220,009,397...220,019,488
Ensembl chr 1:220,009,397...220,019,486
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G |
Sart1 |
spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 1:220,762,496...220,771,158
Ensembl chr 1:220,762,349...220,771,181
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G |
Srsf1 |
serine and arginine rich splicing factor 1 |
|
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr10:75,334,200...75,341,197
Ensembl chr10:75,335,146...75,341,197
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G |
Srsf10 |
serine and arginine rich splicing factor 10 |
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IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 5:154,205,358...154,219,550
Ensembl chr 5:154,205,402...154,213,801
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G |
Srsf12 |
serine and arginine rich splicing factor 12 |
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IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 5:48,456,777...48,484,017
Ensembl chr 5:48,456,757...48,485,912
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G |
Srsf2 |
serine and arginine rich splicing factor 2 |
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IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr10:105,792,779...105,795,986
Ensembl chr10:105,792,779...105,795,958
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G |
Srsf3 |
serine and arginine rich splicing factor 3 |
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IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:6,288,285...6,298,218
Ensembl chr20:6,288,267...6,298,213
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G |
Srsf4 |
serine and arginine rich splicing factor 4 |
|
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 5:150,032,999...150,060,769
Ensembl chr 5:150,032,999...150,060,765
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G |
Srsf5 |
serine and arginine rich splicing factor 5 |
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IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 6:104,611,026...104,640,033
Ensembl chr 6:104,611,026...104,615,302
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G |
Srsf6 |
serine and arginine rich splicing factor 6 |
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IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 3:159,305,345...159,310,668
Ensembl chr 3:159,305,345...159,310,668
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G |
Srsf7 |
serine and arginine rich splicing factor 7 |
|
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 6:2,879,312...2,886,505
Ensembl chr 6:2,880,518...2,886,465
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G |
Srsf8 |
serine and arginine rich splicing factor 8 |
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IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr X:49,529,525...49,530,166 NCBI chr X:49,644,973...49,705,870
Ensembl chr X:49,529,318...49,530,166
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G |
Srsf9 |
serine and arginine rich splicing factor 9 |
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IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr12:47,039,714...47,046,022
Ensembl chr12:47,039,716...47,046,022
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G |
Wbp11 |
WW domain binding protein 11 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 4:170,772,166...170,785,613
Ensembl chr 4:170,772,163...170,810,080 Ensembl chr 4:170,772,163...170,810,080
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G |
Wbp11l1 |
WW domain-binding protein 11-like 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 4:170,154,257...170,167,724
Ensembl chr 4:170,154,227...170,186,942
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G |
Wbp4 |
WW domain binding protein 4 |
involved_in |
ISO ISS |
(PMID:19592703) GO_REF:0000024 |
RGD UniProt |
PMID:19592703 |
GO_REF:0000024 |
NCBI chr15:61,745,989...61,772,516
Ensembl chr15:61,745,989...61,772,516
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G |
Ern1 |
endoplasmic reticulum to nucleus signaling 1 |
involved_in |
ISO |
(PMID:21317875) |
RGD |
PMID:21317875 |
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NCBI chr10:94,588,555...94,682,072
Ensembl chr10:94,588,555...94,681,914
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G |
Ahcyl1 |
adenosylhomocysteinase-like 1 |
acts_upstream_of_or_within involved_in |
ISO |
(PMID:19224921) (MGI:3848108|PMID:19224921) |
RGD |
PMID:19224921 |
MGI:3848108 |
NCBI chr 2:210,438,884...210,474,350
Ensembl chr 2:210,438,893...210,473,761
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G |
Aplp1 |
amyloid beta precursor like protein 1 |
acts_upstream_of_or_within |
ISO |
(MGI:3610697|PMID:16314516) |
RGD |
PMID:16314516 |
MGI:3610697 |
NCBI chr 1:88,897,525...88,908,750
Ensembl chr 1:88,897,532...88,908,750
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G |
App |
amyloid beta precursor protein |
acts_upstream_of_or_within involved_in |
ISS ISO |
GO_REF:0000024 (MGI:3610697|PMID:16314516) |
UniProt RGD |
PMID:16314516 |
GO_REF:0000024 MGI:3610697 |
NCBI chr11:24,425,013...24,641,872
Ensembl chr11:24,425,005...24,641,858
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G |
Cdc73 |
cell division cycle 73 |
involved_in |
ISO ISS IEA |
(PMID:21329879) GO_REF:0000024 GO_REF:0000107 |
RGD UniProt Ensembl |
PMID:21329879 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr13:60,403,771...60,496,511
Ensembl chr13:60,403,771...60,496,511
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G |
Clp1 |
cleavage factor polyribonucleotide kinase subunit 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 3:72,125,269...72,137,122
Ensembl chr 3:72,125,273...72,128,973
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G |
Cpsf1 |
cleavage and polyadenylation specific factor 1 |
involved_in |
ISO IBA |
(PMID:7590244) PMID:21873635 |
RGD |
PMID:7590244, PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 7:117,661,779...117,672,373
Ensembl chr 7:117,661,661...117,672,373
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G |
Cpsf2 |
cleavage and polyadenylation specific factor 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 6:125,870,372...125,898,039
Ensembl chr 6:125,870,372...125,898,874
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G |
Cpsf3 |
cleavage and polyadenylation specific factor 3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 6:43,363,792...43,391,712
Ensembl chr 6:43,363,792...43,391,712
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G |
Cstf2 |
cleavage stimulation factor subunit 2 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr X:104,882,726...104,909,746
Ensembl chr X:104,882,704...104,909,739
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G |
Fip1l1 |
factor interacting with PAPOLA and CPSF1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr14:36,150,381...36,208,395
Ensembl chr14:36,150,399...36,208,373
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G |
Leo1 |
LEO1 homolog, Paf1/RNA polymerase II complex component |
involved_in |
ISO ISS |
(PMID:21329879) GO_REF:0000024 |
RGD UniProt |
PMID:21329879 |
GO_REF:0000024 |
NCBI chr 8:82,380,906...82,405,293
Ensembl chr 8:82,380,757...82,405,644
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G |
Mtpap |
mitochondrial poly(A) polymerase |
involved_in |
ISO IBA |
(PMID:21292163) PMID:21873635 |
RGD |
PMID:21292163, PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr17:56,046,507...56,068,185
Ensembl chr17:56,046,509...56,068,125
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G |
Nudt21 |
nudix hydrolase 21 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr19:11,451,366...11,470,637
Ensembl chr19:11,450,760...11,467,644
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G |
Pabpc1l |
poly(A) binding protein, cytoplasmic 1-like |
acts_upstream_of_or_within |
ISO |
MGI:5437740 (MGI:5437387|PMID:22621333) |
RGD |
PMID:22621333 |
MGI:5437387 |
NCBI chr 3:160,410,733...160,447,073
Ensembl chr 3:160,410,757...160,444,940
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G |
Paf1 |
PAF1 homolog, Paf1/RNA polymerase II complex component |
involved_in |
ISO ISS |
(PMID:21329879) GO_REF:0000024 |
RGD UniProt |
PMID:21329879 |
GO_REF:0000024 |
NCBI chr 1:85,362,421...85,367,999
Ensembl chr 1:85,362,268...85,368,031
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G |
Papola |
poly (A) polymerase alpha |
involved_in |
ISO IBA |
(PMID:19224921), (PMID:7590244) PMID:21873635 |
RGD |
PMID:7590244 PMID:19224921, PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 6:129,609,068...129,662,002
Ensembl chr 6:129,609,074...129,661,531
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G |
Papolg |
poly(A) polymerase gamma |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr14:108,624,359...108,658,371
Ensembl chr14:108,624,359...108,658,371
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G |
Pcf11 |
PCF11 cleavage and polyadenylation factor subunit |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 1:157,463,014...157,494,134
Ensembl chr 1:157,468,626...157,494,008
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G |
Scaf8 |
SR-related CTD-associated factor 8 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 1:44,017,801...44,120,619
Ensembl chr 1:44,019,059...44,120,615
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G |
Ssu72 |
SSU72 homolog, RNA polymerase II CTD phosphatase |
involved_in |
ISO ISS IBA |
(PMID:20861839) GO_REF:0000024 PMID:21873635 |
RGD UniProt |
PMID:20861839, PMID:21873635, PMID:21873635 |
GO_REF:0000024, RGD:13792537, RGD:13792537 |
NCBI chr 5:173,152,964...173,182,720
Ensembl chr 5:173,152,964...173,182,719
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G |
Sympk |
symplekin |
involved_in |
ISO IBA |
(PMID:20861839) PMID:21873635 |
RGD |
PMID:20861839, PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 1:79,931,097...79,959,461
Ensembl chr 1:79,931,156...79,959,461
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G |
Tent2 |
terminal nucleotidyltransferase 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 2:22,746,290...22,798,252
Ensembl chr 2:22,747,547...22,798,214
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G |
Tent4b |
terminal nucleotidyltransferase 4B |
involved_in |
ISO |
(PMID:28383716) |
RGD |
PMID:28383716 |
|
NCBI chr19:19,771,289...19,834,759
Ensembl chr19:19,771,677...19,832,812
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G |
Tut1 |
terminal uridylyl transferase 1, U6 snRNA-specific |
involved_in |
ISS IBA ISO |
GO_REF:0000024 PMID:21873635 (PMID:18288197), (PMID:21102410) |
UniProt RGD |
PMID:18288197 PMID:21102410, PMID:21873635, PMID:21873635 |
GO_REF:0000024, RGD:13792537, RGD:13792537 |
NCBI chr 1:225,151,462...225,162,445
Ensembl chr 1:225,151,404...225,162,595
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G |
Tut4 |
terminal uridylyl transferase 4 |
|
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 5:128,063,880...128,168,726
Ensembl chr 5:128,083,118...128,168,207
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G |
Tut7 |
terminal uridylyl transferase 7 |
|
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr17:5,225,854...5,279,674
Ensembl chr17:5,225,835...5,271,794
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|
G |
Wdr33 |
WD repeat domain 33 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr18:24,584,832...24,689,681
Ensembl chr18:24,584,900...24,689,636
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|
|
G |
A1cf |
APOBEC1 complementation factor |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 1:250,426,027...250,514,245
Ensembl chr 1:250,426,158...250,514,866
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|
G |
AABR07031533.1 |
|
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
Ensembl chr18:18,003,537...18,079,560
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|
G |
AABR07035787.1 |
|
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
Ensembl chr12:22,466,601...22,470,972
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|
G |
AABR07051190.1 |
|
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
Ensembl chr 3:260,653...262,124
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|
G |
AABR07065078.1 |
|
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
Ensembl chr 6:107,156,263...107,164,033
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|
G |
Adar |
adenosine deaminase, RNA-specific |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 2:189,045,551...189,085,448
Ensembl chr 2:189,062,443...189,083,236
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|
G |
Adarb1 |
adenosine deaminase, RNA-specific, B1 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr20:11,972,352...12,101,022
Ensembl chr20:11,972,381...12,101,047
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G |
Adarb2 |
adenosine deaminase, RNA-specific, B2 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr17:58,098,979...58,653,137
Ensembl chr17:58,104,559...58,301,260
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|
G |
Akap8l |
A-kinase anchoring protein 8 like |
involved_in |
ISO |
(PMID:17594903) |
RGD |
PMID:17594903 |
|
NCBI chr 7:14,340,168...14,369,835
Ensembl chr 7:14,340,170...14,369,821
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|
G |
Alkbh5 |
alkB homolog 5, RNA demethylase |
involved_in |
ISO IBA ISS |
(PMID:23177736) PMID:21873635 GO_REF:0000024 |
RGD UniProt |
PMID:23177736, PMID:21873635, PMID:21873635 |
GO_REF:0000024, RGD:13792537, RGD:13792537 |
NCBI chr10:46,906,314...46,927,759
Ensembl chr10:46,906,115...46,930,579
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|
G |
Apobec1 |
apolipoprotein B mRNA editing enzyme catalytic subunit 1 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 4:155,386,367...155,414,034
Ensembl chr 4:155,386,711...155,401,480
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|
G |
Apobec4 |
apolipoprotein B mRNA editing enzyme catalytic polypeptide like 4 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr13:70,157,098...70,165,686
Ensembl chr13:70,157,522...70,165,568
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|
G |
Arl6ip4 |
ADP-ribosylation factor like GTPase 6 interacting protein 4 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr12:37,904,376...37,906,521
Ensembl chr12:37,904,379...37,906,521
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|
G |
Brdt |
bromodomain testis associated |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr14:3,437,876...3,462,613
Ensembl chr14:3,405,995...3,462,629
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|
G |
C1qbp |
complement C1q binding protein |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr10:57,613,876...57,618,527
Ensembl chr10:57,613,879...57,618,527
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|
G |
Carm1 |
coactivator-associated arginine methyltransferase 1 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 8:22,577,723...22,622,555
Ensembl chr 8:22,577,715...22,622,560
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|
G |
Cdk12 |
cyclin-dependent kinase 12 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr10:86,157,186...86,210,657
Ensembl chr10:86,157,608...86,222,707
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G |
Cir1 |
corepressor interacting with RBPJ, CIR1 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 3:59,994,547...60,023,843
Ensembl chr 3:59,994,181...60,023,913
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|
G |
Clasrp |
CLK4-associating serine/arginine rich protein |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 1:80,491,520...80,515,761
Ensembl chr 1:80,491,480...80,515,694
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|
G |
Cpeb1 |
cytoplasmic polyadenylation element binding protein 1 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 1:143,171,457...143,278,485
Ensembl chr 1:143,171,264...143,278,485
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|
G |
Cpsf6 |
cleavage and polyadenylation specific factor 6 |
involved_in |
ISO |
(PMID:14690600) |
RGD |
PMID:14690600 |
|
NCBI chr 7:60,385,688...60,417,661
Ensembl chr 7:60,385,688...60,416,925
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|
G |
Csdc2 |
cold shock domain containing C2 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 7:123,168,811...123,183,336
Ensembl chr 7:123,168,811...123,183,335
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|
G |
Cstf1 |
cleavage stimulation factor subunit 1 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 3:170,380,413...170,392,162
Ensembl chr 3:170,380,719...170,392,160
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|
G |
Cstf3 |
cleavage stimulation factor subunit 3 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr 3:94,530,586...94,603,378
Ensembl chr 3:94,530,586...94,607,588
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|
G |
Ctnnbl1 |
catenin, beta like 1 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 3:154,212,245...154,373,170
Ensembl chr 3:154,212,202...154,373,169
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|
G |
Da2-19 |
uncharacterized LOC302729 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr X:48,196,789...48,213,506
Ensembl chr X:48,196,916...48,213,505
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|
G |
Ddx1 |
DEAD-box helicase 1 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 6:38,422,892...38,453,762
Ensembl chr 6:38,422,888...38,453,797
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|
G |
Elavl4 |
ELAV like RNA binding protein 4 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 5:130,001,387...130,144,557
Ensembl chr 5:130,001,372...130,085,838
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|
G |
Ern2 |
endoplasmic reticulum to nucleus signaling 2 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr 1:192,126,023...192,142,865
Ensembl chr 1:192,126,023...192,142,854
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|
G |
Fam172a |
family with sequence similarity 172, member A |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 2:4,942,795...5,547,744
Ensembl chr 2:4,942,775...5,545,144
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|
G |
Fblim1 |
filamin binding LIM protein 1 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr 5:160,122,466...160,158,921
Ensembl chr 5:160,122,425...160,158,386
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|
G |
Fmr1 |
FMRP translational regulator 1 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr X:154,684,924...154,722,369
Ensembl chr X:154,684,935...154,722,314
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|
G |
Gpatch1 |
G patch domain containing 1 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr 1:91,529,096...91,578,032
Ensembl chr 1:91,529,112...91,578,048
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|
G |
H2ab3 |
H2A.B variant histone 3 |
involved_in |
ISO |
(PMID:22795134) |
RGD |
PMID:22795134 |
|
NCBI chr X:88,602,135...88,602,485
Ensembl chr X:88,602,135...88,602,485
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|
G |
Habp4 |
hyaluronan binding protein 4 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr17:1,679,561...1,702,245
Ensembl chr17:1,679,627...1,701,623
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|
G |
Hnrnpa1 |
heterogeneous nuclear ribonucleoprotein A1 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 7:144,865,302...144,871,592
Ensembl chr 7:144,865,608...144,871,585
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|
G |
Hnrnpa2b1 |
heterogeneous nuclear ribonucleoprotein A2/B1 |
involved_in |
ISO IEA |
(PMID:2557628) GO_REF:0000002 |
RGD InterPro |
PMID:2557628 |
GO_REF:0000002 |
NCBI chr 4:81,237,496...81,241,281
Ensembl chr 4:81,237,496...81,241,282
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|
G |
Hnrnpa3 |
heterogeneous nuclear ribonucleoprotein A3 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 3:62,481,222...62,491,356
Ensembl chr 3:62,481,323...62,487,227
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|
G |
Hnrnpf |
heterogeneous nuclear ribonucleoprotein F |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 4:149,957,143...149,978,896
Ensembl chr 4:149,957,206...149,978,895
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|
G |
Hnrnph1 |
heterogeneous nuclear ribonucleoprotein H1 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr10:35,872,619...35,879,911
Ensembl chr10:35,870,232...35,879,910
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|
G |
Hnrnpk |
heterogeneous nuclear ribonucleoprotein K |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr17:6,664,730...6,676,753
Ensembl chr17:6,665,659...6,676,654
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|
G |
Hnrnpl |
heterogeneous nuclear ribonucleoprotein L |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr 1:86,994,090...87,006,776
Ensembl chr 1:86,996,093...87,006,776
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|
G |
Hnrnpll |
heterogeneous nuclear ribonucleoprotein L-like |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr 6:2,698,983...2,729,715
Ensembl chr 6:2,699,961...2,729,394
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G |
Hnrnpu |
heterogeneous nuclear ribonucleoprotein U |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr13:96,222,093...96,238,845
Ensembl chr13:96,225,912...96,238,572
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|
G |
Hspa8 |
heat shock protein family A (Hsp70) member 8 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 8:44,989,401...44,993,261
Ensembl chr 8:44,990,014...44,993,179
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|
G |
Iws1 |
interacts with SUPT6H, CTD assembly factor 1 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr18:24,849,508...24,891,339
Ensembl chr18:24,849,545...24,880,317
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|
G |
Jmjd6 |
jumonji domain containing 6, arginine demethylase and lysine hydroxylase |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr10:105,781,752...105,787,803
Ensembl chr10:105,781,753...105,787,803
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|
G |
Khdrbs1 |
KH RNA binding domain containing, signal transduction associated 1 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 5:147,927,145...147,953,093
Ensembl chr 5:147,927,152...147,953,093
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|
G |
Khdrbs2 |
KH RNA binding domain containing, signal transduction associated 2 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 9:39,501,431...40,008,707
Ensembl chr 9:39,539,530...40,008,680
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|
G |
Khdrbs3 |
KH RNA binding domain containing, signal transduction associated 3 |
|
IDA |
|
RGD |
PMID:11118435 |
RGD:632715 |
NCBI chr 7:110,031,819...110,179,475
Ensembl chr 7:110,031,696...110,179,468
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|
G |
Khsrp |
KH-type splicing regulatory protein |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 9:10,013,795...10,023,670
Ensembl chr 9:10,013,854...10,022,924
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|
G |
Larp7 |
La ribonucleoprotein 7, transcriptional regulator |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 2:231,866,888...231,882,002
Ensembl chr 2:231,867,135...231,881,939
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G |
Lgals3 |
galectin 3 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr15:24,153,602...24,165,537
Ensembl chr15:24,141,651...24,165,537
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|
G |
LOC100910882 |
RNA-binding protein 39-like |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr 3:152,226,011...152,259,236
Ensembl chr 3:151,691,514...151,724,654 Ensembl chr 3:151,691,514...151,724,654
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|
G |
LOC108348175 |
protein quaking-like |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 1:50,828,585...50,936,459
|
|
G |
LOC679894 |
similar to THO complex subunit 2 (Tho2) |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr14:6,561,962...6,601,906
Ensembl chr14:6,581,983...6,587,141
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|
G |
Lsm1 |
LSM1 homolog, mRNA degradation associated |
involved_in |
IEA |
GO_REF:0000104 |
UniProt |
|
GO_REF:0000104 |
NCBI chr16:71,046,475...71,057,883
Ensembl chr16:71,046,475...71,057,883
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|
G |
Magoh |
mago homolog, exon junction complex subunit |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 5:127,480,465...127,487,617
Ensembl chr 5:127,480,485...127,487,603
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|
G |
Mbnl2 |
muscleblind-like splicing regulator 2 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr15:105,640,097...105,797,933
Ensembl chr15:105,640,097...105,797,932
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|
G |
Mettl3 |
methyltransferase-like 3 |
involved_in |
ISO |
(MGI:5527005|PMID:24209618) |
RGD |
PMID:24209618 |
MGI:5527005 |
NCBI chr15:28,710,299...28,721,491
Ensembl chr15:28,710,300...28,721,127
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|
G |
Mtpap |
mitochondrial poly(A) polymerase |
|
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr17:56,046,507...56,068,185
Ensembl chr17:56,046,509...56,068,125
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|
G |
Nsrp1 |
nuclear speckle splicing regulatory protein 1 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr10:63,098,115...63,131,779
Ensembl chr10:63,098,116...63,133,185
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|
G |
Nudt21 |
nudix hydrolase 21 |
involved_in |
ISO ISS IBA |
(PMID:8626397) GO_REF:0000024 PMID:21873635 |
RGD UniProt |
PMID:8626397, PMID:21873635, PMID:21873635 |
GO_REF:0000024, RGD:13792537, RGD:13792537 |
NCBI chr19:11,451,366...11,470,637
Ensembl chr19:11,450,760...11,467,644
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G |
Pabpc1 |
poly(A) binding protein, cytoplasmic 1 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 7:75,409,581...75,421,874
Ensembl chr 7:75,409,581...75,422,268
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G |
Pan2 |
poly(A) specific ribonuclease subunit PAN2 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 7:2,717,021...2,736,541
Ensembl chr 7:2,718,700...2,736,157
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G |
Pan3 |
poly(A) specific ribonuclease subunit PAN3 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr12:9,214,116...9,331,901
Ensembl chr12:9,216,536...9,331,195
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G |
Pdcd11 |
programmed cell death 11 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr 1:266,866,931...266,908,042
Ensembl chr 1:266,866,931...266,908,042
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G |
Pde12 |
phosphodiesterase 12 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr16:2,357,028...2,367,069
Ensembl chr16:2,357,028...2,367,253
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G |
Phrf1 |
PHD and ring finger domains 1 |
|
IMP |
|
RGD |
PMID:8692929 |
RGD:1299392 |
NCBI chr 1:214,215,673...214,248,906
Ensembl chr 1:214,215,992...214,248,901
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G |
Pnn |
pinin, desmosome associated protein |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 6:80,159,364...80,167,677
Ensembl chr 6:80,159,364...80,167,677
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|
G |
Ppil3 |
peptidylprolyl isomerase like 3 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 9:65,315,407...65,329,145
Ensembl chr 9:65,315,410...65,329,066
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|
G |
Prkaca |
protein kinase cAMP-activated catalytic subunit alpha |
involved_in |
ISO IEA |
(PMID:17594903) GO_REF:0000107 |
RGD Ensembl |
PMID:17594903 |
GO_REF:0000107 |
NCBI chr19:25,095,089...25,118,869
Ensembl chr19:25,095,089...25,118,860
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|
G |
Prmt9 |
protein arginine methyltransferase 9 |
involved_in |
ISO |
(PMID:25737013) |
RGD |
PMID:25737013 |
|
NCBI chr19:34,067,008...34,105,626
Ensembl chr19:34,070,632...34,105,610
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|
G |
Prpf18 |
pre-mRNA processing factor 18 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr17:77,601,914...77,632,507
Ensembl chr17:77,601,877...77,663,980
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|
G |
Prpf38b |
pre-mRNA processing factor 38B |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 2:211,706,245...211,715,271
Ensembl chr 2:211,706,228...211,715,311
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|
G |
Ptbp1 |
polypyrimidine tract binding protein 1 |
involved_in |
IMP IEA |
GO_REF:0000043 |
UniProt |
PMID:16177139 |
GO_REF:0000043, RGD:10045980 |
NCBI chr 7:12,663,965...12,673,723
Ensembl chr 7:12,663,965...12,673,718
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G |
Ptbp3 |
polypyrimidine tract binding protein 3 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 5:76,670,074...76,756,196
Ensembl chr 5:76,673,990...76,756,147
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G |
Puf60 |
poly-U binding splicing factor 60 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 7:117,129,237...117,140,234
Ensembl chr 7:117,129,237...117,140,214
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G |
Qk |
quaking |
|
IMP |
|
RGD |
PMID:21253564 |
RGD:10045996 |
NCBI chr 1:50,983,647...51,050,692
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|
G |
Rbbp6 |
RB binding protein 6, ubiquitin ligase |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr 1:192,933,264...192,965,160
Ensembl chr 1:192,933,540...192,965,158
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G |
Rbfox1 |
RNA binding fox-1 homolog 1 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr10:8,312,961...10,437,778
Ensembl chr10:8,312,961...8,654,892
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|
G |
Rbfox2 |
RNA binding fox-1 homolog 2 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 7:118,157,093...118,396,733
Ensembl chr 7:118,156,946...118,396,728
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G |
Rbfox3 |
RNA binding fox-1 homolog 3 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr10:107,517,916...107,850,764
Ensembl chr10:107,516,995...107,539,658
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G |
Rbm20 |
RNA binding motif protein 20 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 1:274,391,932...274,589,816
Ensembl chr 1:274,391,932...274,589,816
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G |
Rbm25l1 |
RNA binding motif protein 25-like 1 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr10:10,457,316...10,460,540
Ensembl chr10:10,457,320...10,460,756
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G |
Rbm26 |
RNA binding motif protein 26 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr15:89,262,683...89,339,323
Ensembl chr15:89,266,710...89,339,323
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G |
Rbm27 |
RNA binding motif protein 27 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr18:36,596,568...36,657,157
Ensembl chr18:36,596,585...36,656,314
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G |
Rbm39 |
RNA binding motif protein 39 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr 3:151,691,498...151,724,723
Ensembl chr 3:151,691,514...151,724,654
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G |
Rbm4 |
RNA binding motif protein 4 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 1:220,038,403...220,049,756
Ensembl chr 1:220,039,734...220,048,966
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G |
Rbmxl1b |
RNA binding motif protein, X-linked-like 1B |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 4:42,186,612...42,188,294
Ensembl chr 4:42,186,612...42,188,289
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G |
Rnasel |
ribonuclease L |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr13:71,188,712...71,202,636
Ensembl chr13:71,192,142...71,202,625
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G |
Scaf1 |
SR-related CTD-associated factor 1 |
|
IMP |
|
RGD |
PMID:8692929 |
RGD:1299392 |
NCBI chr 1:100,997,724...101,010,855
Ensembl chr 1:100,997,745...101,008,266
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G |
Scaf4 |
SR-related CTD-associated factor 4 |
|
IMP |
|
RGD |
PMID:8692929 |
RGD:1299392 |
NCBI chr11:30,371,713...30,428,073
Ensembl chr11:30,371,713...30,428,073
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G |
Scaf8 |
SR-related CTD-associated factor 8 |
|
IMP |
|
RGD |
PMID:8692929 |
RGD:1299392 |
NCBI chr 1:44,017,801...44,120,619
Ensembl chr 1:44,019,059...44,120,615
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G |
Sf3a1 |
splicing factor 3a, subunit 1 |
involved_in |
ISO |
(PMID:15647371) |
RGD |
PMID:15647371 |
|
NCBI chr14:84,393,182...84,413,931
Ensembl chr14:84,393,182...84,413,931
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G |
Sf3a2 |
splicing factor 3a, subunit 2 |
involved_in |
ISO |
(PMID:15647371) |
RGD |
PMID:15647371 |
|
NCBI chr 7:11,777,826...11,784,373
Ensembl chr 7:11,777,826...11,783,849
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G |
Sf3a3 |
splicing factor 3a, subunit 3 |
involved_in |
ISO |
(PMID:15647371) |
RGD |
PMID:15647371 |
|
NCBI chr 5:142,702,721...142,722,350
Ensembl chr 5:142,702,685...142,722,341
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G |
Smn1 |
survival of motor neuron 1, telomeric |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr 2:30,360,101...30,371,147
Ensembl chr 2:30,360,100...30,371,147
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G |
Smndc1 |
survival motor neuron domain containing 1 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 1:274,096,068...274,107,138
Ensembl chr 1:274,096,068...274,107,138
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G |
Snrnp27 |
small nuclear ribonucleoprotein U4/U6.U5 subunit 27 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 4:118,478,075...118,487,633
Ensembl chr 4:118,478,075...118,534,280
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G |
Son |
SON DNA and RNA binding protein |
involved_in |
ISO |
(PMID:21504830) |
RGD |
PMID:21504830 |
|
NCBI chr11:31,806,598...31,837,769
Ensembl chr11:31,806,618...31,837,763
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G |
Srek1 |
splicing regulatory glutamic acid and lysine rich protein 1 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 2:33,806,035...33,841,594
Ensembl chr 2:33,809,807...33,841,499
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G |
Srek1ip1 |
SREK1-interacting protein 1 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 2:34,923,187...34,940,410
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G |
Srrm1 |
serine and arginine repetitive matrix 1 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 5:153,675,619...153,708,187
Ensembl chr 5:153,675,624...153,708,170
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G |
Srrm4 |
serine/arginine repetitive matrix 4 |
involved_in |
ISO IBA |
(MGI:4414616|PMID:19737518) PMID:21873635 |
RGD |
PMID:19737518, PMID:21873635, PMID:21873635 |
MGI:4414616, RGD:13792537, RGD:13792537 |
NCBI chr12:45,726,192...45,884,644
Ensembl chr12:45,727,112...45,882,548
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G |
Sugp1 |
SURP and G patch domain containing 1 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr16:21,100,923...21,131,795
Ensembl chr16:21,100,924...21,131,795
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G |
Sugp2 |
SURP and G patch domain containing 2 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr16:20,908,162...20,939,574
Ensembl chr16:20,910,177...20,939,545
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G |
Supt4h1 |
SPT4 homolog, DSIF elongation factor subunit |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr10:75,032,365...75,038,547
Ensembl chr10:75,032,365...75,038,547
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G |
Syncrip |
synaptotagmin binding, cytoplasmic RNA interacting protein |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 8:96,100,692...96,266,342
Ensembl chr 8:96,105,025...96,266,342
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G |
Tardbp |
TAR DNA binding protein |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 5:165,432,089...165,442,232
Ensembl chr 5:165,432,095...165,442,048
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G |
Tcerg1 |
transcription elongation regulator 1 |
involved_in |
ISO |
(PMID:20215116) |
RGD |
PMID:20215116 |
|
NCBI chr18:36,796,290...36,889,966
Ensembl chr18:36,829,062...36,889,966
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G |
Tdrd3 |
tudor domain containing 3 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr15:70,732,164...70,864,855
Ensembl chr15:70,790,125...70,859,185
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G |
Tent2 |
terminal nucleotidyltransferase 2 |
|
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 2:22,746,290...22,798,252
Ensembl chr 2:22,747,547...22,798,214
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G |
Thoc2 |
THO complex 2 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr X:128,153,824...128,268,327
Ensembl chr X:128,161,895...128,268,322
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G |
Thoc5 |
THO complex 5 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr14:85,138,219...85,171,729
Ensembl chr14:85,142,279...85,171,726
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G |
Thoc6 |
THO complex 6 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr10:12,989,135...12,994,495
Ensembl chr10:12,989,135...12,994,495
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G |
Thoc7 |
THO complex 7 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr15:12,569,235...12,584,101
Ensembl chr15:12,569,235...12,584,094
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G |
Thrap3 |
thyroid hormone receptor associated protein 3 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 5:144,178,248...144,221,318
Ensembl chr 5:144,179,023...144,221,263
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G |
Trub2 |
TruB pseudouridine synthase family member 2 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 3:8,338,479...8,348,746
Ensembl chr 3:8,338,484...8,348,746
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G |
Tsen15 |
tRNA splicing endonuclease subunit 15 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr13:69,765,093...69,781,019
Ensembl chr13:69,765,091...69,781,019
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G |
Tsen2 |
tRNA splicing endonuclease subunit 2 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 4:147,455,506...147,490,869
Ensembl chr 4:147,455,533...147,490,733
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G |
Tsen34 |
tRNA splicing endonuclease subunit 34 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 1:64,023,924...64,031,756
Ensembl chr 1:64,024,240...64,030,175 Ensembl chr 1:64,024,240...64,030,175
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G |
Tsen34l1 |
tRNA splicing endonuclease subunit 34-like 1 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 1:64,092,224...64,100,061
Ensembl chr 1:64,092,226...64,099,277
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G |
Tut1 |
terminal uridylyl transferase 1, U6 snRNA-specific |
|
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 1:225,151,462...225,162,445
Ensembl chr 1:225,151,404...225,162,595
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G |
Tut4 |
terminal uridylyl transferase 4 |
|
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 5:128,063,880...128,168,726
Ensembl chr 5:128,083,118...128,168,207
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G |
Tut7 |
terminal uridylyl transferase 7 |
|
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr17:5,225,854...5,279,674
Ensembl chr17:5,225,835...5,271,794
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G |
Virma |
vir like m6A methyltransferase associated |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 5:25,042,743...25,121,403
Ensembl chr 5:25,042,710...25,120,264
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G |
Wtap |
WT1 associated protein |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 1:47,942,500...47,967,633
Ensembl chr 1:47,942,500...47,967,631
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G |
Xrn2 |
5'-3' exoribonuclease 2 |
involved_in |
IEA |
GO_REF:0000104 |
UniProt |
|
GO_REF:0000104 |
NCBI chr 3:141,224,858...141,298,272
Ensembl chr 3:141,225,290...141,298,265
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G |
Ybx1 |
Y box binding protein 1 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 5:138,319,754...138,336,721
Ensembl chr 5:138,319,762...138,336,475
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G |
Zfp36l1 |
zinc finger protein 36, C3H type-like 1 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 6:103,308,032...103,313,074
Ensembl chr 6:103,308,045...103,313,074
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G |
Zfp830 |
zinc finger protein 830 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr10:70,118,250...70,119,714
Ensembl chr10:70,118,250...70,119,716
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G |
Zranb2 |
zinc finger RANBP2-type containing 2 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 2:263,864,088...263,877,872
Ensembl chr 2:263,864,331...263,877,821
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Celf1 |
CUGBP, Elav-like family member 1 |
acts_upstream_of_or_within involved_in |
ISO IBA |
(PMID:11158314) (MGI:1930458|PMID:11158314) PMID:21873635 |
RGD |
PMID:11158314, PMID:21873635, PMID:21873635 |
MGI:1930458, RGD:13792537, RGD:13792537 |
NCBI chr 3:79,768,900...79,844,548
Ensembl chr 3:79,823,945...79,842,082
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G |
Celf2 |
CUGBP, Elav-like family member 2 |
acts_upstream_of_or_within involved_in |
IEA ISO IBA |
GO_REF:0000107 (MGI:1930458|PMID:11158314) PMID:21873635 (PMID:11158314) |
Ensembl RGD |
PMID:11158314, PMID:21873635, PMID:21873635 |
GO_REF:0000107 MGI:1930458, RGD:13792537, RGD:13792537 |
NCBI chr17:75,259,269...75,660,154
Ensembl chr17:75,352,389...75,654,951
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G |
Celf3 |
CUGBP, Elav-like family member 3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 2:195,716,373...195,732,872
Ensembl chr 2:195,719,543...195,730,274
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G |
Celf4 |
CUGBP, Elav-like family member 4 |
acts_upstream_of_or_within involved_in |
ISO IBA |
(MGI:1930458|PMID:11158314) PMID:21873635 |
RGD |
PMID:11158314, PMID:21873635, PMID:21873635 |
MGI:1930458, RGD:13792537, RGD:13792537 |
NCBI chr18:17,689,090...18,079,835
Ensembl chr18:17,698,038...17,716,880
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G |
Celf5 |
CUGBP, Elav-like family member 5 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 7:11,095,449...11,119,941
Ensembl chr 7:11,095,468...11,119,941
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G |
Celf6 |
CUGBP, Elav-like family member 6 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 8:64,364,491...64,428,452
Ensembl chr 8:64,364,741...64,428,386
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G |
Khdc4 |
KH domain containing 4, pre-mRNA splicing factor |
involved_in |
ISO |
(PMID:19641227) |
RGD |
PMID:19641227 |
|
NCBI chr 2:188,051,657...188,080,280
Ensembl chr 2:188,052,236...188,080,301
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G |
Luc7l |
LUC7-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr10:15,538,878...15,572,651
Ensembl chr10:15,538,872...15,568,638
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G |
Luc7l2 |
LUC7-like 2 pre-mRNA splicing factor |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 4:66,290,319...66,357,970
Ensembl chr 4:66,290,389...66,354,711
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G |
Luc7l3 |
LUC7-like 3 pre-mRNA splicing factor |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr10:81,991,147...82,027,119
Ensembl chr10:81,991,147...82,027,119
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G |
Mbnl1 |
muscleblind-like splicing regulator 1 |
acts_upstream_of_or_within |
ISO |
MGI:3052922 (MGI:2682447|PMID:14671308), (MGI:3655436|PMID:16717059) |
RGD |
PMID:14671308 PMID:16717059 |
MGI:2682447 MGI:3655436 |
NCBI chr 2:150,698,248...150,867,791
Ensembl chr 2:150,756,185...150,869,690
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G |
Nol3 |
nucleolar protein 3 |
involved_in |
ISO ISS IEA |
(PMID:10196175) GO_REF:0000024 GO_REF:0000107 |
RGD UniProt Ensembl |
PMID:10196175 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr19:37,232,567...37,236,668
Ensembl chr19:37,235,001...37,236,649
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G |
Ptbp2 |
polypyrimidine tract binding protein 2 |
acts_upstream_of_or_within |
ISO |
MGI:4124189 (MGI:1859428|PMID:10829067), (MGI:5430666|PMID:22802532) |
RGD |
PMID:10829067 PMID:22802532 |
MGI:1859428 MGI:5430666 |
NCBI chr 2:223,261,444...223,323,075
Ensembl chr 2:223,262,852...223,322,585
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G |
Puf60 |
poly-U binding splicing factor 60 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 7:117,129,237...117,140,234
Ensembl chr 7:117,129,237...117,140,214
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G |
Rbmx |
RNA binding motif protein, X-linked |
|
IMP |
|
RGD |
PMID:19282290 |
RGD:2316827 |
NCBI chr X:159,881,835...159,891,405
Ensembl chr X:159,884,885...159,891,326
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G |
Rbmxl1 |
RBMX like 1 |
involved_in |
IDA |
PMID:19282290 |
UniProt |
PMID:19282290, PMID:19282290 |
RGD:2316827, RGD:2316827 |
NCBI chr19:33,081,473...33,084,988
Ensembl chr19:33,083,412...33,084,915
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G |
Setx |
senataxin |
involved_in |
ISO |
(PMID:19515850) |
RGD |
PMID:19515850 |
|
NCBI chr 3:7,680,430...7,731,815
Ensembl chr 3:7,686,503...7,730,539
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G |
Srsf10 |
serine and arginine rich splicing factor 10 |
involved_in |
ISO |
(PMID:9774382) |
RGD |
PMID:9774382 |
|
NCBI chr 5:154,205,358...154,219,550
Ensembl chr 5:154,205,402...154,213,801
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G |
Srsf6 |
serine and arginine rich splicing factor 6 |
involved_in |
ISO ISS IBA |
(PMID:12549914) GO_REF:0000024 PMID:21873635 |
RGD UniProt |
PMID:12549914, PMID:21873635, PMID:21873635 |
GO_REF:0000024, RGD:13792537, RGD:13792537 |
NCBI chr 3:159,305,345...159,310,668
Ensembl chr 3:159,305,345...159,310,668
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G |
Ythdc1 |
YTH domain containing 1 |
involved_in |
ISO ISS |
(PMID:20167602) GO_REF:0000024 |
RGD UniProt |
PMID:20167602 |
GO_REF:0000024 |
NCBI chr14:22,971,834...23,002,326
Ensembl chr14:22,971,836...23,002,011
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G |
Ern1 |
endoplasmic reticulum to nucleus signaling 1 |
involved_in |
ISO |
(PMID:11779464), (PMID:19328063), (PMID:19622636), (PMID:20625543), (PMID:21317875) |
RGD |
PMID:11779464 PMID:19328063 PMID:19622636 PMID:20625543 PMID:21317875 |
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NCBI chr10:94,588,555...94,682,072
Ensembl chr10:94,588,555...94,681,914
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G |
AABR07008911.1 |
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involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
Ensembl chr 2:78,282,959...78,283,473
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G |
AABR07037800.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr X:31,054,394...31,055,344
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G |
AABR07042226.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr X:150,660,743...150,666,309
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G |
AABR07042323.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr X:152,781,188...152,781,574
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G |
AABR07054367.1 |
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involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
Ensembl chr 3:150,135,821...150,153,775
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G |
AABR07055789.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
Ensembl chr 7:10,064,414...10,068,532
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G |
AC113901.1 |
|
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
Ensembl chr 2:78,427,178...78,427,751
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G |
AC126899.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
Ensembl chr19:44,396,248...44,396,610
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G |
Aqr |
aquarius intron-binding spliceosomal factor |
involved_in |
ISO |
(PMID:28076346) |
RGD |
PMID:28076346 |
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NCBI chr 3:105,570,399...105,640,431
Ensembl chr 3:105,570,292...105,640,463
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G |
Bcas2 |
BCAS2, pre-mRNA processing factor |
involved_in |
ISO |
(PMID:28076346) |
RGD |
PMID:28076346 |
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NCBI chr 2:205,662,633...205,670,514
Ensembl chr 2:205,662,588...205,670,511
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G |
Bud13 |
BUD13 homolog |
involved_in |
ISS IBA IEA ISO |
GO_REF:0000024 PMID:21873635 GO_REF:0000107 (PMID:29360106) |
UniProt Ensembl RGD |
PMID:29360106, PMID:21873635, PMID:21873635 |
GO_REF:0000024 GO_REF:0000107, RGD:13792537, RGD:13792537 |
NCBI chr 8:50,573,026...50,588,860
Ensembl chr 8:50,573,026...50,588,858
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G |
Bud31 |
BUD31 homolog |
involved_in |
ISO IBA |
(PMID:28076346) PMID:21873635 |
RGD |
PMID:28076346, PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr12:11,232,963...11,240,449
Ensembl chr12:11,232,964...11,240,400
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G |
Casc3 |
CASC3 exon junction complex subunit |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (PMID:29301961) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:29301961 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr10:86,724,534...86,744,485
Ensembl chr10:86,724,427...86,745,927
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G |
Cdc40 |
cell division cycle 40 |
involved_in |
ISO |
(PMID:28076346) |
RGD |
PMID:28076346 |
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NCBI chr20:48,503,973...48,574,546
Ensembl chr20:48,503,973...48,574,546
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G |
Cdc5l |
cell division cycle 5-like |
involved_in |
ISO IBA ISS |
(PMID:28076346) PMID:21873635 GO_REF:0000024 |
RGD UniProt |
PMID:28076346, PMID:21873635, PMID:21873635 |
GO_REF:0000024, RGD:13792537, RGD:13792537 |
NCBI chr 9:17,949,764...17,988,514
Ensembl chr 9:17,949,764...17,988,509
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G |
Crnkl1 |
crooked neck pre-mRNA splicing factor 1 |
involved_in |
ISS ISO IBA |
GO_REF:0000024 (PMID:28076346) PMID:21873635 |
UniProt RGD |
PMID:28076346, PMID:21873635, PMID:21873635 |
GO_REF:0000024, RGD:13792537, RGD:13792537 |
NCBI chr 6:18,349,226...18,351,540
Ensembl chr 6:18,349,167...18,351,536
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G |
Cwc15 |
CWC15 spliceosome-associated protein |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:28076346) |
UniProt RGD |
PMID:28076346 |
GO_REF:0000024 |
NCBI chr 8:12,994,131...13,004,958
Ensembl chr 8:12,994,155...13,004,957
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G |
Cwc22 |
CWC22 spliceosome associated protein homolog |
involved_in |
ISO IBA |
(PMID:29360106) PMID:21873635 |
RGD |
PMID:29360106, PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 3:64,731,145...64,780,127
Ensembl chr 3:64,731,381...64,766,472
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G |
Cwc25 |
CWC25 spliceosome-associated protein homolog |
involved_in |
ISO IBA |
(PMID:29301961) PMID:21873635 |
RGD |
PMID:29301961, PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr10:85,684,898...85,709,568
Ensembl chr10:85,684,898...85,709,568
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G |
Cwf19l1 |
CWF19 like cell cycle control factor 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 1:263,887,014...263,910,251
Ensembl chr 1:263,887,015...263,910,251
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G |
Cwf19l2 |
CWF19 like cell cycle control factor 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 6:18,970,616...19,037,176
Ensembl chr 6:18,970,564...19,055,924
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G |
Dbr1 |
debranching RNA lariats 1 |
acts_upstream_of_or_within involved_in |
ISO IBA |
(MGI:1890021|PMID:10982890) PMID:21873635 |
RGD |
PMID:10982890, PMID:21873635, PMID:21873635 |
MGI:1890021, RGD:13792537, RGD:13792537 |
NCBI chr 8:107,826,690...107,838,186
Ensembl chr 8:107,826,424...107,838,339
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G |
Ddx23 |
DEAD-box helicase 23 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 7:140,325,453...140,342,730
Ensembl chr 7:140,325,431...140,342,727
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G |
Ddx39a |
DExD-box helicase 39A |
involved_in |
ISO IBA |
UniProtKB:Q07478 (PMID:15047853) PMID:21873635 |
RGD |
PMID:15047853, PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr19:24,846,530...24,854,886
Ensembl chr19:24,846,938...24,854,953
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G |
Ddx39b |
DExD-box helicase 39B |
involved_in |
ISO IBA |
UniProtKB:Q07478 (PMID:15047853) PMID:21873635 |
RGD |
PMID:15047853, PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr20:4,806,103...4,818,600
Ensembl chr20:4,806,108...4,818,568
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G |
Ddx41 |
DEAD-box helicase 41 |
involved_in |
ISO IBA |
(PMID:25920683) PMID:21873635 |
RGD |
PMID:25920683, PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr17:9,631,925...9,637,317
Ensembl chr17:9,631,925...9,637,316
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G |
Ddx46 |
DEAD-box helicase 46 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr17:9,475,275...9,519,545
Ensembl chr17:9,475,538...9,519,595
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G |
Dhx16 |
DEAH-box helicase 16 |
involved_in |
ISO |
(PMID:20423332), (PMID:25296192), (PMID:29360106) |
RGD |
PMID:20423332 PMID:25296192 PMID:29360106 |
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NCBI chr20:3,368,971...3,386,087
Ensembl chr20:3,367,150...3,386,106
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G |
Dhx38 |
DEAH-box helicase 38 |
involved_in |
ISO IBA |
(PMID:9524131) PMID:21873635 |
RGD |
PMID:9524131, PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr19:42,110,291...42,127,540
Ensembl chr19:42,110,327...42,127,542
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G |
Dhx8 |
DEAH-box helicase 8 |
involved_in |
ISO |
(PMID:28076346) |
RGD |
PMID:28076346 |
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NCBI chr10:89,645,979...89,683,839
Ensembl chr10:89,645,973...89,683,446
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G |
Eftud2 |
elongation factor Tu GTP binding domain containing 2 |
involved_in |
ISO IBA |
(PMID:28076346) PMID:21873635 |
RGD |
PMID:28076346, PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr10:90,932,071...90,983,971
Ensembl chr10:90,932,075...90,983,928
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G |
Eif4a3 |
eukaryotic translation initiation factor 4A3 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:29301961) |
UniProt RGD |
PMID:29301961 |
GO_REF:0000024 |
NCBI chr10:108,415,201...108,425,195
Ensembl chr10:108,415,202...108,425,206
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G |
Gcfc2 |
GC-rich sequence DNA-binding factor 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 4:112,662,556...112,700,505
Ensembl chr 4:112,662,609...112,699,711
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G |
Gpkow |
G patch domain and KOW motifs |
involved_in |
ISO IBA |
(PMID:25296192) PMID:21873635 |
RGD |
PMID:25296192, PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr X:15,636,567...15,651,332
Ensembl chr X:15,636,563...15,651,332
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G |
Hnrnpa2b1 |
heterogeneous nuclear ribonucleoprotein A2/B1 |
involved_in |
ISO ISS IEA |
(PMID:26321680) GO_REF:0000024 GO_REF:0000107 |
RGD UniProt Ensembl |
PMID:26321680 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 4:81,237,496...81,241,281
Ensembl chr 4:81,237,496...81,241,282
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G |
Hnrnpc |
heterogeneous nuclear ribonucleoprotein C |
involved_in |
ISO ISS |
(PMID:25719671) GO_REF:0000024 |
RGD UniProt |
PMID:25719671 |
GO_REF:0000024 |
NCBI chr15:28,486,605...28,517,353
Ensembl chr15:28,486,617...28,517,353
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G |
Hnrnpm |
heterogeneous nuclear ribonucleoprotein M |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 7:18,516,253...18,554,536
Ensembl chr 7:18,516,512...18,554,227
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G |
Htatsf1 |
HIV-1 Tat specific factor 1 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr X:159,514,053...159,528,281
Ensembl chr X:159,513,800...159,528,281
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G |
Ik |
IK cytokine |
involved_in |
ISS IBA ISO |
GO_REF:0000024 PMID:21873635 (PMID:28781166) |
UniProt RGD |
PMID:28781166, PMID:21873635 |
GO_REF:0000024, RGD:13792537 |
NCBI chr18:29,587,901...29,602,705
Ensembl chr18:29,587,901...29,608,338
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G |
Isy1 |
ISY1 splicing factor homolog |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:29301961) |
UniProt RGD |
PMID:29301961 |
GO_REF:0000024 |
NCBI chr 4:119,721,659...119,742,349
Ensembl chr 4:119,721,660...119,742,349
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G |
LOC100359574 |
NHP2 non-histone chromosome protein 2-like 1-like |
involved_in |
ISS IBA |
GO_REF:0000024 PMID:21873635 |
UniProt |
PMID:21873635, PMID:21873635 |
GO_REF:0000024, RGD:13792537, RGD:13792537 |
NCBI chr 1:281,863,115...281,864,546
Ensembl chr 1:281,863,918...281,864,304 Ensembl chr 7:281,863,918...281,864,304
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G |
LOC100360750 |
Sm protein F-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr13:47,380,376...47,382,933
Ensembl chr13:47,380,406...47,382,955 Ensembl chr19:47,380,406...47,382,955
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G |
LOC102548514 |
crooked neck-like protein 1-like |
involved_in |
ISS IBA |
GO_REF:0000024 PMID:21873635 |
UniProt |
PMID:21873635, PMID:21873635 |
GO_REF:0000024, RGD:13792537, RGD:13792537 |
NCBI chr 3:140,125,232...140,141,730
Ensembl chr 3:140,126,797...140,141,679
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G |
LOC108348453 |
calsequestrin-1-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr16:6,440,153...6,467,211
Ensembl chr16:6,434,468...6,478,396
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G |
LOC500684 |
hypothetical protein LOC500684 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 6:103,932,428...103,935,122
Ensembl chr 6:103,932,428...103,935,122
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G |
LOC687679 |
similar to small nuclear ribonucleoprotein polypeptide G |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 1:91,588,215...91,588,629
Ensembl chr 4:118,167,294...118,174,842 Ensembl chr 1:118,167,294...118,174,842
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G |
Lsm2 |
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated |
involved_in |
ISO IBA |
(PMID:28781166) PMID:21873635 |
RGD |
PMID:28781166, PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr20:4,966,817...4,970,567
Ensembl chr20:4,966,817...4,970,568
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G |
Lsm3 |
LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated |
involved_in |
ISO IBA |
(PMID:10369684), (PMID:10523320), (PMID:28781166) PMID:21873635 |
RGD |
PMID:10369684 PMID:10523320 PMID:28781166, PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 4:123,162,086...123,168,330
Ensembl chr 4:123,162,086...123,168,330
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G |
Lsm4 |
LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated |
involved_in |
ISO |
(PMID:28781166) |
RGD |
PMID:28781166 |
|
NCBI chr16:20,506,399...20,511,818
Ensembl chr16:20,506,399...20,511,818
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G |
Lsm5 |
LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated |
involved_in |
ISO IBA |
(PMID:28781166) PMID:21873635 |
RGD |
PMID:28781166, PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr 4:87,016,003...87,019,219
Ensembl chr 4:87,016,003...87,019,219 Ensembl chr 6:87,016,003...87,019,219
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G |
Lsm6 |
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated |
involved_in |
ISO IBA |
(PMID:28781166) PMID:21873635 |
RGD |
PMID:28781166, PMID:21873635, PMID:21873635 |
RGD:13792537, RGD:13792537 |
NCBI chr19:32,770,640...32,785,215
Ensembl chr19:32,770,655...32,785,215
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G |
| |