.
ABC-type xenobiotic transporter activity - Ontology Report - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:ABC-type xenobiotic transporter activity
go back to main search page
Accession:GO:0008559 term browser browse the term
Definition:Catalysis of the reaction: ATP + H2O + xenobiotic(in) = ADP + phosphate + xenobiotic(out).
Synonyms:exact_synonym: ATP-dependent xenobiotic transmembrane transporter activity;   xenobiotic transmembrane transporting ATPase activity
 narrow_synonym: xenobiotic ABC transporter
 related_synonym: ATP phosphohydrolase (xenobiotic-exporting);   ATPase-coupled xenobiotic transmembrane transporter activity;   MDR protein;   P-glycoprotein;   PDR protein;   multidrug resistance exporter;   multidrug-resistance protein;   pleiotropic-drug-resistance protein
 alt_id: GO:0005226;   GO:0008560
 xref: EC:7.6.2.2;   MetaCyc:3.6.3.44-RXN;   Reactome:R-HSA-9757139 "ABCB1,ABCC2 transport ATVs from cytosol to extracellular region"

 Loading Annotations... 
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
X

show annotations for term's descendants           Sort by:
ABC-type xenobiotic transporter activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca3 ATP binding cassette subfamily A member 3 enables ISS
ISO
IEA		 GO_REF:0000024
(PMID:26903515)
GO_REF:0000003
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:26903515 GO_REF:0000003 GO_REF:0000024 GO_REF:0000107 NCBI chr10:13,886,948...13,944,286
Ensembl chr10:13,382,540...13,439,745 		JBrowse link
G Abca8 ATP binding cassette subfamily A member 8 enables ISO (PMID:12379217) RGD PMID:12379217 NCBI chr10:95,416,984...95,490,647
Ensembl chr10:94,917,520...94,990,988 		JBrowse link
G Abcb11 ATP binding cassette subfamily B member 11 enables ISO
ISS
IMP		 (PMID:18245269)
GO_REF:0000024		 RGD
UniProt		 PMID:18245269 PMID:18245269 GO_REF:0000024, RGD:30309924 NCBI chr 3:74,424,620...74,520,646
Ensembl chr 3:54,017,127...54,112,730 		JBrowse link
G Abcb1a ATP binding cassette subfamily B member 1A enables ISO
IEA		 RNAcentral:URS000021202F_9606|RNAcentral:URS00003496BE_9606 (PMID:23893241), (PMID:26850595), (PMID:28260112), (PMID:28411377), (PMID:28757552)
GO_REF:0000107		 RGD
Ensembl		 PMID:23893241 PMID:26850595 PMID:28260112 PMID:28411377 PMID:28757552 GO_REF:0000107 NCBI chr 4:26,312,403...26,488,456
Ensembl chr 4:25,158,362...25,442,709 		JBrowse link
G Abcb1b ATP-binding cassette, sub-family B member 1B enables IEA GO_REF:0000003
GO_REF:0000107		 UniProt
Ensembl		 GO_REF:0000003 GO_REF:0000107 NCBI chr 4:26,197,706...26,280,156
Ensembl chr 4:25,242,798...25,325,199 		JBrowse link
G Abcb4 ATP binding cassette subfamily B member 4 enables IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:26,106,895...26,164,440
Ensembl chr 4:25,151,953...25,209,202 		JBrowse link
G Abcc1 ATP binding cassette subfamily C member 1 enables IDA
IMP
IBA
IEA		 estrone 3-sulfate transport
GO_REF:0000033
GO_REF:0000116
GO_REF:0000003		 GO_Central
RHEA
UniProt
RGD		 PMID:12867490 PMID:12893836 GO_REF:0000003 GO_REF:0000033 GO_REF:0000116, RGD:2303048, RGD:2303061 NCBI chr10:1,022,041...1,162,431
Ensembl chr10:531,812...655,114 		JBrowse link
G Abcc10 ATP binding cassette subfamily C member 10 enables ISO
IEA		 (PMID:23087055)
GO_REF:0000107		 RGD
Ensembl		 PMID:23087055 GO_REF:0000107 NCBI chr 9:22,154,811...22,174,743
Ensembl chr 9:14,657,264...14,677,178 		JBrowse link
G Abcc2 ATP binding cassette subfamily C member 2 enables ISO
IMP
IEA		 (PMID:10220572), (PMID:18245269)
GO_REF:0000107
GO_REF:0000003		 RGD
Ensembl
UniProt		 PMID:10220572 PMID:18245269 PMID:10220572 GO_REF:0000003 GO_REF:0000107, RGD:42721988 NCBI chr 1:252,613,875...252,672,459
Ensembl chr 1:242,664,657...242,723,238 		JBrowse link
G Abcc3 ATP binding cassette subfamily C member 3 enables IEA
ISO		 GO_REF:0000107
(PMID:11581266), (PMID:18245269), (PMID:19334674)
GO_REF:0000003		 Ensembl
RGD
UniProt		 PMID:11581266 PMID:18245269 PMID:19334674 GO_REF:0000003 GO_REF:0000107 NCBI chr10:79,793,571...79,839,528
Ensembl chr10:79,296,693...79,342,595 		JBrowse link
G Abcc4 ATP binding cassette subfamily C member 4 enables IEA GO_REF:0000003 UniProt GO_REF:0000003 NCBI chr15:101,948,387...102,182,912
Ensembl chr15:95,542,315...95,774,283 		JBrowse link
G Abcc5 ATP binding cassette subfamily C member 5 enables ISO
ISS
IEA		 (PMID:12695538), (PMID:15899835)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:12695538 PMID:15899835 GO_REF:0000024 GO_REF:0000107 NCBI chr11:93,975,579...94,071,659
Ensembl chr11:80,473,872...80,567,253 		JBrowse link
G Abcc6 ATP binding cassette subfamily C member 6 enables IDA PMID:10692506 UniProt PMID:10692506 RGD:1549867 NCBI chr 1:105,583,681...105,637,895
Ensembl chr 1:96,447,251...96,501,464 		JBrowse link
G Abcg2 ATP binding cassette subfamily G member 2 enables ISO
IEA		 (PMID:9861027)
GO_REF:0000003		 RGD
UniProt		 PMID:9861027 GO_REF:0000003 NCBI chr 4:89,006,056...89,132,915
Ensembl chr 4:87,745,319...87,802,409 		JBrowse link
G Ralbp1 ralA binding protein 1 enables IEA GO_REF:0000003 UniProt GO_REF:0000003 NCBI chr 9:112,903,289...112,940,093
Ensembl chr 9:105,456,425...105,492,707 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 21102
    transporter activity 1395
      transmembrane transporter activity 1278
        xenobiotic transmembrane transporter activity 32
          ABC-type xenobiotic transporter activity 15
            ABC-type bacteriocin transporter activity 0
Path 2
Term Annotations click to browse term
  molecular_function 21102
    transporter activity 1395
      transmembrane transporter activity 1278
        active transmembrane transporter activity 449
          primary active transmembrane transporter activity 168
            ATPase-coupled transmembrane transporter activity 119
              ABC-type transporter activity 56
                ABC-type xenobiotic transporter activity 15
                  ABC-type bacteriocin transporter activity 0
paths to the root