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nervous system measurement - Ontology Report - Rat Genome Database

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CLINICAL MEASUREMENT - ANNOTATIONS

The Clinical Measurement Ontology (CMO), Measurement Methods Ontology (MMO), and Experimental Condition Ontology (XCO) are currently being developed at the Rat Genome Database. For more information about these vocabularies please see Shimoyama et al. Three ontologies to define phenotype measurement data. Front Genet. 2012;3:87. Epub 2012 May 28 or contact us (https://rgd.mcw.edu/rgdweb/contact/contactus.html).
Term:nervous system measurement
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Accession:CMO:0001232 term browser browse the term
Definition:Any measurement of the nervous system, the organ system which, along with the endocrine system, correlates the adjustments and reactions of the organism to its internal and external environment via transmission of information, in the form of electrochemical impulses, throughout the body.

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brain infarction volume term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bp49 Blood pressure QTL 49 IDA 16.6 RGD PMID:9241273 RGD:61056 NCBI chr 5:60,293,434...98,603,051 JBrowse link
brain neurotensin receptor 1 density term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Alcrsp12 Alcohol response QTL 12 IDA RGD PMID:15608595 RGD:1334439 NCBI chr 9:27,468,639...72,468,639 JBrowse link
Q Alcrsp13 Alcohol response QTL 13 IDA RGD PMID:15608595 RGD:1334439 NCBI chr 9:1...43,718,459 JBrowse link
Q Alcrsp14 Alcohol response QTL 14 IDA RGD PMID:15608595 RGD:1334439 NCBI chr15:1...42,356,671 JBrowse link
brain spike-and-wave discharge frequency term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Swd3 Spike wave discharge measurement QTL 3 IDA 2.4E-5 4.62 RGD PMID:15030491 RGD:1553898 NCBI chr 4:58,432,133...92,991,462 JBrowse link
Q Swd5 Spike wave discharge measurement QTL 5 IDA 3.6E-4 3.45 RGD PMID:15030491 RGD:1553898 NCBI chr 8:14,906,751...59,906,751 JBrowse link
brain spike-and-wave discharge rate term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Swd6 Spike wave discharge measurement QTL 6 IDA 0.01 5.8 RGD PMID:23903052 RGD:7794751 NCBI chr 2:39,223,937...48,793,699 JBrowse link
Q Swd7 Spike wave discharge measurement QTL 7 IDA 0.01 3.2 RGD PMID:23903052 RGD:7794751 NCBI chr 2:141,656,606...147,588,984 JBrowse link
brain spike-and-wave discharge severity grade term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Swd4 Spike wave discharge measurement QTL 4 IDA 2.0E-4 3.68 RGD PMID:15030491 RGD:1553898 NCBI chr 7:86,983,365...131,983,365 JBrowse link
brain total spike-and-wave discharge duration term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Swd2 Spike wave discharge measurement QTL 2 IDA 2.0E-4 3.64 RGD PMID:15270755 RGD:1302436 NCBI chr 5:151,113,452...164,465,185 JBrowse link
encephalitis incidence/prevalence measurement term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Vie1 Viral induced encephalitis QTL 1 IDA 26.4 RGD PMID:22761571 RGD:7240516 NCBI chr 4:34,430,484...82,490,359 JBrowse link
Q Vie2 Viral induced encephalitis QTL 2 IDA 4.1 RGD PMID:22761571 RGD:7240516 NCBI chr 3:145,956,084...169,034,231 JBrowse link
Q Vie3 Viral induced encephalitis QTL 3 IDA 2.6 RGD PMID:22761571 RGD:7240516 NCBI chr 6:96,833,997...140,994,061 JBrowse link
Q Vie4 Viral induced encephalitis QTL 4 IDA 7.3 RGD PMID:22761571 RGD:7240516 NCBI chr 4:62,933,508...82,490,359 JBrowse link
Q Vie5 Viral induced encephalitis QTL 5 IDA 25.3 RGD PMID:22761571 RGD:7240516 NCBI chr 4:34,430,484...82,490,359 JBrowse link
experimental autoimmune encephalomyelitis incidence/prevalence measurement term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Eae12 Experimental allergic encephalomyelitis QTL 12 IDA 9.0E-4 RGD PMID:10545597 RGD:69695 NCBI chr10:92,238,497...101,012,337 JBrowse link
Q Eae13 Experimental allergic encephalomyelitis QTL 13 IDA 0.032 RGD PMID:10545597 RGD:69695 NCBI chr12:24,139,202...36,638,073 JBrowse link
Q Eae14 Experimental allergic encephalomyelitis QTL 14 IDA 0.0024 RGD PMID:10545597 RGD:69695 NCBI chr13:23,203,448...68,203,448 JBrowse link
Q Eae15 Experimental allergic encephalomyelitis QTL 15 IDA 0.001 RGD PMID:10545597 RGD:69695 NCBI chr18:76,477,814...77,209,844 JBrowse link
Q Eae16 Experimental allergic encephalomyelitis QTL 16 IDA 3.8 RGD PMID:12517974 RGD:629629 NCBI chr 8:8,462,195...110,921,472 JBrowse link
Q Eae17 Experimental allergic encephalomyelitis QTL 17 IDA 4.1 RGD PMID:12517974 RGD:629629 NCBI chr13:8,897,350...101,631,289 JBrowse link
Q Eae2 Experimental allergic encephalomyelitis QTL 2 IDA 4.3 RGD PMID:9973459 RGD:69694 NCBI chr 4:21,333,343...39,505,420 JBrowse link
Q Eae3 Experimental allergic encephalomyelitis QTL 3 IDA 4.1 RGD PMID:9973459 RGD:69694 NCBI chr10:26,521,957...61,345,413 JBrowse link
Q Eae4 Experimental allergic encephalomyelitis QTL 4 IDA RGD PMID:10072499 RGD:69712 NCBI chr 9:1...25,661,317 JBrowse link
logarithm of the ratio of the lesioned side motor neuron count to contralateral side motor neuron count term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Neudeg1 Neurodegradation QTL 1 IDA 0.0 5.5 RGD PMID:14586010 RGD:1358788 NCBI chr 8:30,188,867...94,457,446 JBrowse link
mean duration of a single type I spike-and-wave discharge train term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Swd1 Spike wave discharge measurement QTL 1 IDA 1.2E-4 3.91 RGD PMID:15270755 RGD:1302436 NCBI chr 9:101,597,509...102,302,863 JBrowse link
MHC Class II RT1A-positive spinal cord ventral horn area to total spinal cord ventral horn area ratio term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Neuinf2 Neuroinflammation QTL 2 IDA 0.0 27.0 RGD PMID:14586010 RGD:1358788 NCBI chr10:6,154,377...6,357,896 JBrowse link
Q Neuinf3 Neuroinflammation QTL 3 IDA 26.4 RGD PMID:14586010 RGD:1358788 NCBI chr10:3,406,320...5,387,112 JBrowse link
percentage of study population developing cerebrovascular lesions during a period of time term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Strs4 Sensitivity to stroke QTL 4 IDA 8.7 RGD PMID:23690346 RGD:7411685 NCBI chr 1:78,430,536...123,430,536 JBrowse link
Q Strs5 Sensitivity to stroke QTL 5 IDA 9.4 RGD PMID:23690346 RGD:7411685 NCBI chr18:49,999,958...65,845,095 JBrowse link
Q Strs6 Sensitivity to stroke QTL 6 IDA 3.9 RGD PMID:23690346 RGD:7411685 NCBI chr 5:134,972,980...138,113,556 JBrowse link
Q Strs7 Sensitivity to stroke QTL 7 IDA 3.8 RGD PMID:23690346 RGD:7411685 NCBI chr15:40,289,901...49,308,583 JBrowse link
percentage of study population developing experimental autoimmune encephalomyelitis during a period of time term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Eae20 Experimental allergic encephalomyelitis QTL 20 IDA 7.8 RGD PMID:15634914 RGD:1547849 NCBI chr 4:153,031,106...158,841,762 JBrowse link
Q Eae24 Experimental allergic encephalomyelitis QTL 24 IDA RGD PMID:19675581 RGD:2317591 NCBI chr 4:66,993,185...72,752,834 JBrowse link
Q Eae25 Experimental allergic encephalomyelitis QTL 25 IDA 9.300000190734863 RGD PMID:19675581 RGD:2317591 NCBI chr 4:78,882,817...83,007,655 JBrowse link
Q Eae27 Experimental allergic encephalomyelitis QTL 27 IDA RGD PMID:19675581 RGD:2317591 NCBI chr 4:103,194,805...112,478,794 JBrowse link
Q Eae8 Experimental allergic encephalomyelitis QTL 8 IDA 4.0 RGD PMID:10640775 RGD:61031 NCBI chr19:24,816,041...33,061,905 JBrowse link
percentage of study population developing relapsing-remitting experimental autoimmune encephalomyelitis during a period of time term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Eae10 Experimental allergic encephalomyelitis QTL 10 IDA 3.5 RGD PMID:10640775 RGD:61031 NCBI chr14:17,622,685...18,274,498 JBrowse link
Q Eae5 Experimental allergic encephalomyelitis QTL 5 IDA 14.0 RGD PMID:10640775 RGD:61031 NCBI chr12:19,610,870...46,669,029 JBrowse link
percentage of study population developing trigeminal nerve neurilemmomas during a period of time term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Schws1 Schwannoma susceptibility QTL 1 IDA 0.0041 RGD PMID:16003739 RGD:1559300 NCBI chr10:40,035,094...102,359,817 JBrowse link
Q Schws2 Schwannoma susceptibility QTL 2 IDA 0.029 RGD PMID:16003739 RGD:1559300
Q Schws3 Schwannoma susceptibility QTL 3 IDA 0.001 RGD PMID:16003739 RGD:1559300 NCBI chr 3:118,839,124...163,839,124 JBrowse link
Q Schws4 Schwannoma susceptibility QTL 4 IDA 0.0078 RGD PMID:16003739 RGD:1559300 NCBI chr 6:83,190,345...106,747,639 JBrowse link
Q Schws7 Schwannoma susceptibility QTL 7 IDA 0.0115 RGD PMID:16003739 RGD:1559300 NCBI chr10:4,765,527...19,816,042 JBrowse link
Q Schws8 Schwannoma susceptibility QTL 8 IDA RGD PMID:25303613 RGD:11566050 NCBI chr 6:94,968,928...139,968,928 JBrowse link
Q Schws9 Schwannoma susceptibility QTL 9 IDA RGD PMID:25303613 RGD:11566050 NCBI chr 6:61,747,639...106,747,639 JBrowse link
post-insult time to onset of cerebrovascular lesion term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Strs1 Sensitivity to stroke QTL 1 IDA 7.4 RGD PMID:8696337 RGD:61093 NCBI chr 1:121,767,634...166,767,634 JBrowse link
Q Strs2 Sensitivity to stroke QTL 2 IDA 4.7 RGD PMID:8696337 RGD:61093 NCBI chr 5:135,929,696...166,875,058 JBrowse link
Q Strs3 Sensitivity to stroke QTL 3 IDA 3.0 RGD PMID:8696337 RGD:61093 NCBI chr 4:40,433,388...85,433,388 JBrowse link
post-insult time to onset of experimental autoimmune encephalomyelitis term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Eae11 Experimental allergic encephalomyelitis QTL 11 IDA 2.9 RGD PMID:10640775 RGD:61031 NCBI chr 4:1...39,505,420 JBrowse link
Q Eae22 Experimental allergic encephalomyelitis QTL 22 IDA RGD PMID:15634914 RGD:1547849
Q Eae24 Experimental allergic encephalomyelitis QTL 24 IDA RGD PMID:19675581 RGD:2317591 NCBI chr 4:66,993,185...72,752,834 JBrowse link
Q Eae25 Experimental allergic encephalomyelitis QTL 25 IDA 9.300000190734863 RGD PMID:19675581 RGD:2317591 NCBI chr 4:78,882,817...83,007,655 JBrowse link
Q Eaex Experimental allergic encephalomyelitis QTL x IDA 3.0 RGD PMID:10640775 RGD:61031 NCBI chr 5:55,715,622...100,715,622 JBrowse link
post-insult time to trigeminal nerve neurilemmoma formation term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Schws5 Schwannoma susceptibility QTL 5 IDA 0.0351 RGD PMID:16003739 RGD:1559300
spinal cord beta-2 microglobulin mRNA level term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Neuinf10 Neuroinflammation QTL 10 IDA 3.7 RGD PMID:19525015 RGD:2311085 NCBI chr11:31,239,134...78,851,519 JBrowse link
Q Neuinf12 Neuroinflammation QTL 12 IDA 3.5 RGD PMID:19525015 RGD:2311085 NCBI chr15:1...55,302,115 JBrowse link
Q Neuinf8 Neuroinflammation QTL 8 IDA 4.6 RGD PMID:19525015 RGD:2311085 NCBI chr 1:57,336,763...151,090,257 JBrowse link
spinal cord Cd74 protein level term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Neuinf5 Neuroinflammation QTL 5 IDA 3.7 RGD PMID:19525015 RGD:2311085 NCBI chr 7:9,462,246...58,265,113 JBrowse link
spinal cord complement component 1, q subcomponent, B chain mRNA level term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Neuinf11 Neuroinflammation QTL 11 IDA 3.9 RGD PMID:19525015 RGD:2311085 NCBI chr 3:15,005,422...76,927,699 JBrowse link
Q Neuinf9 Neuroinflammation QTL 9 IDA 4.6 RGD PMID:19525015 RGD:2311085 NCBI chr10:5,801,990...62,146,030 JBrowse link
spinal cord RT1-B protein level term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Neuinf4 Neuroinflammation QTL 4 IDA 5.1 RGD PMID:19525015 RGD:2311085 NCBI chr 1:1...28,736,750 JBrowse link
Q Neuinf6 Neuroinflammation QTL 6 IDA 3.3 RGD PMID:19525015 RGD:2311085 NCBI chr 7:1...27,829,089 JBrowse link
Q Neuinf7 Neuroinflammation QTL 7 IDA 3.4 RGD PMID:19525015 RGD:2311085 NCBI chr10:72,224,939...107,211,142 JBrowse link
stimulated renal sympathetic nerve activity to basal renal sympathetic nerve activity ratio term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Stresp23 Stress response QTL 23 IDA RGD PMID:16239369 RGD:1578503 NCBI chr 1:123,350,408...182,418,476 JBrowse link
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