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PATHWAY ONTOLOGY - ANNOTATIONS

The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:Wnt signaling, the planar cell polarity pathway
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Accession:PW:0000200 term browser browse the term
Definition:The planar cell polarity (PCP) Wnt signaling pathway plays an essential role in morphogenesis through the regulation of tissues patterning.
Synonyms:related_synonym: PCP Wnt signaling pathway;   Wnt signaling pathway, planar cell polarity pathway

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Wnt signaling, the planar cell polarity pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celsr1 cadherin, EGF LAG seven-pass G-type receptor 1 ISO RGD PMID:17226800 RGD:2293492 NCBI chr 7:116,987,616...117,125,035
Ensembl chr 7:116,987,605...117,125,164
JBrowse link
G Daam1 dishevelled associated activator of morphogenesis 1 ISO RGD PMID:17226800 RGD:2293492 NCBI chr 6:90,389,544...90,550,114
Ensembl chr 6:90,389,688...90,550,114
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 ISO RGD PMID:15608632 RGD:1581694 NCBI chr 5:166,456,989...166,468,733
Ensembl chr 5:166,456,686...166,468,664
JBrowse link
G Dvl2 dishevelled segment polarity protein 2 ISO RGD PMID:17226800 RGD:2293492 NCBI chr10:54,723,356...54,732,823
Ensembl chr10:54,723,411...54,732,820
JBrowse link
G Fzd3 frizzled class receptor 3 ISO RGD PMID:17226800 RGD:2293492 NCBI chr15:39,421,366...39,488,369
Ensembl chr15:39,421,355...39,488,369
JBrowse link
G Fzd6 frizzled class receptor 6 ISO RGD PMID:17226800 RGD:2293492 NCBI chr 7:70,055,012...70,086,781
Ensembl chr 7:70,055,068...70,086,776
JBrowse link
G Prickle1 prickle planar cell polarity protein 1 ISO RGD PMID:17226800 RGD:2293492 NCBI chr 7:124,639,142...124,735,027
Ensembl chr 7:124,639,142...124,658,113
JBrowse link
G Prickle2 prickle planar cell polarity protein 2 ISO RGD PMID:17226800 RGD:2293492 NCBI chr 4:124,869,655...125,214,862
Ensembl chr 4:124,869,552...125,214,824
JBrowse link
G Ptk7 protein tyrosine kinase 7 ISO RGD PMID:17226800 RGD:2293492 NCBI chr 9:14,352,155...14,418,473
Ensembl chr 9:14,351,202...14,418,494
JBrowse link
G Rac1 Rac family small GTPase 1 ISO RGD PMID:15608632 RGD:1581694 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
JBrowse link
G Rhoa ras homolog family member A ISO RGD PMID:15637299 RGD:2302030 NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746
JBrowse link
G Scrib scribble planar cell polarity protein ISO RGD PMID:17226800 RGD:2293492 NCBI chr 7:107,759,343...107,782,364
Ensembl chr 7:107,759,343...107,782,331
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 ISO RGD PMID:17226800 RGD:2293492 NCBI chr13:84,462,731...84,489,404
Ensembl chr13:84,465,527...84,489,378
JBrowse link
G Wnt7b Wnt family member 7B ISO
IMP
RGD PMID:15608632 PMID:18177422 RGD:1581694, RGD:2292645 NCBI chr 7:116,634,817...116,679,459
Ensembl chr 7:116,634,814...116,679,581
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  pathway 6092
    signaling pathway 2646
      signaling pathway pertinent to development 536
        Wnt signaling pathway 192
          Wnt signaling, non-canonical pathway 44
            Wnt signaling, the planar cell polarity pathway 14
              altered Wnt signaling, the planar cell polarity pathway 0
Path 2
Term Annotations click to browse term
  pathway 6092
    signaling pathway 2646
      glycoconjugated protein signaling pathway 416
        glycoprotein signaling pathway 300
          Wnt signaling pathway 192
            Wnt signaling, non-canonical pathway 44
              Wnt signaling, the planar cell polarity pathway 14
                altered Wnt signaling, the planar cell polarity pathway 0
paths to the root