Rps6ka1 (ribosomal protein S6 kinase polypeptide 1)

Gene: Rps6ka1 (ribosomal protein S6 kinase polypeptide 1) Mus musculus

Analyze

Symbol:

Rps6ka1

Name:

ribosomal protein S6 kinase polypeptide 1

RGD ID:

732452

MGI Page

MGI

Description:

Enables DNA-binding transcription factor binding activity and kinase activity. Involved in hepatocyte proliferation. Located in spindle. Is active in synapse. Is expressed in central nervous system; early conceptus; lumbar dorsal root ganglion; oocyte; and retina. Orthologous to human RPS6KA1 (ribosomal protein S6 kinase A1).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

90 kDa ribosomal protein S6 kinase 1; MAP kinase-activated protein kinase 1a; MAPK-activated protein kinase 1a; MAPKAP kinase 1a; Mapkapk-1a; p90-RSK 1; p90-Rsk1; p90rsk; p90Rsk1; p90S6K; ribosomal protein S6 kinase alpha-1; Ribosomal protein S6 kinase, 90kD, 1; ribosomal protein S6 kinase, 90kD, polypeptide 1; ribosomal S6 kinase 1; Rs; rsk; Rsk-1; Rsk1; S6K-alpha-1

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	RPS6KA1 (ribosomal protein S6 kinase A1)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OrthoDB, Panther, Treefam
Rattus norvegicus (Norway rat):	Rps6ka1 (ribosomal protein S6 kinase A1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Rps6ka1 (ribosomal protein S6 kinase A1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	RPS6KA1 (ribosomal protein S6 kinase A1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	RPS6KA1 (ribosomal protein S6 kinase A1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Rps6ka1 (ribosomal protein S6 kinase A1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	RPS6KA1 (ribosomal protein S6 kinase A1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	RPS6KA1 (ribosomal protein S6 kinase A1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Rps6ka1 (ribosomal protein S6 kinase A1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	RPS6KA2 (ribosomal protein S6 kinase A2)	HGNC	OrthoMCL
Homo sapiens (human):	RPS6KA6 (ribosomal protein S6 kinase A6)	HGNC	OrthoMCL
Homo sapiens (human):	RPS6KA3 (ribosomal protein S6 kinase A3)	HGNC	OrthoMCL
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Rps6ka1 (ribosomal protein S6 kinase A1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	RPS6KA1 (ribosomal protein S6 kinase A1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	rps6ka1 (ribosomal protein S6 kinase a, polypeptide 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	rps6ka3a (ribosomal protein S6 kinase a, polypeptide 3a)	Alliance	DIOPT (ZFIN)
Saccharomyces cerevisiae (baker's yeast):	KIN82	Alliance	DIOPT (Ensembl Compara\|InParanoid)
Caenorhabditis elegans (roundworm):	rskn-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	S6kII	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	FPK1	Alliance	DIOPT (Ensembl Compara\|InParanoid)
Xenopus tropicalis (tropical clawed frog):	rps6ka1	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	133,574,601 - 133,615,466 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	133,574,601 - 133,615,108 (-)	Ensembl		GRCm39 Ensembl
GRCm38	4	133,847,290 - 133,887,797 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	133,847,290 - 133,887,797 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	133,403,205 - 133,443,714 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	133,119,370 - 133,159,860 (-)	NCBI		MGSCv36	mm8
Celera	4	132,018,889 - 132,060,783 (-)	NCBI		Celera
Cytogenetic Map	4	D2.3	NCBI
cM Map	4	66.37	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

fetal alcohol spectrum disorder (ISO)

genetic disease (ISO)

retinitis pigmentosa 59 (ISO)

Sezary's disease (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (EXP)

(20R)-protopanaxadiol (ISO)

1,2-dimethylhydrazine (EXP)

1-chloro-2,4-dinitrobenzene (ISO)

15-deoxy-Delta(12,14)-prostaglandin J2 (EXP)

17alpha-ethynylestradiol (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-palmitoylglycerol (ISO)

6-propyl-2-thiouracil (ISO)

9-cis-retinoic acid (EXP)

acrolein (ISO)

acrylamide (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

alpha-pinene (ISO)

amitrole (ISO)

antirheumatic drug (ISO)

arsenite(3-) (EXP)

avermectin (ISO)

benzo[a]pyrene (EXP,ISO)

bis(2-chloroethyl) sulfide (ISO)

bis(2-ethylhexyl) phthalate (EXP)

bisphenol A (EXP,ISO)

butanal (ISO)

caffeine (ISO)

calcitriol (ISO)

cannabidiol (ISO)

carbamazepine (ISO)

carbon nanotube (EXP)

cisplatin (ISO)

cobalt dichloride (EXP)

cocaine (ISO)

copper atom (ISO)

copper(0) (ISO)

cyclosporin A (ISO)

deoxynivalenol (EXP)

dibutyl phthalate (EXP)

diclofenac (ISO)

doxorubicin (EXP)

elemental selenium (ISO)

enzacamene (ISO)

enzyme inhibitor (ISO)

epoxiconazole (EXP)

ethanol (EXP,ISO)

ethyl methanesulfonate (ISO)

fasudil (ISO)

fenthion (EXP)

flufenoxuron (EXP)

folic acid (EXP)

folpet (EXP)

formaldehyde (ISO)

FR900359 (ISO)

gallic acid (ISO)

inulin (EXP)

ivermectin (ISO)

letrozole (EXP)

lipopolysaccharide (EXP)

LY294002 (EXP)

lycopene (ISO)

methidathion (EXP)

methyl methanesulfonate (ISO)

myricetin (EXP)

N-methyl-4-phenylpyridinium (EXP)

N-nitrosodiethylamine (EXP)

N-nitrosodimethylamine (ISO)

nickel atom (ISO)

Nodularin (ISO)

ochratoxin A (ISO)

ozone (ISO)

paracetamol (EXP,ISO)

perfluorooctane-1-sulfonic acid (EXP)

phorbol 13-acetate 12-myristate (EXP)

pioglitazone (ISO)

pirinixic acid (EXP)

pregnenolone 16alpha-carbonitrile (EXP)

propiconazole (EXP,ISO)

quercetin (ISO)

resveratrol (ISO)

rotenone (ISO)

selenium atom (ISO)

selumetinib (EXP)

sirolimus (EXP,ISO)

sodium arsenite (ISO)

sodium dichromate (EXP,ISO)

Soman (ISO)

SU6656 (ISO)

sulfadimethoxine (ISO)

sunitinib (ISO)

temozolomide (ISO)

tert-butyl hydroperoxide (ISO)

testosterone (ISO)

tetrachloromethane (EXP,ISO)

titanium dioxide (EXP)

toluene (ISO)

tungsten (EXP)

vitamin E (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

hepatocyte proliferation (IDA)

intracellular signal transduction (IEA)

negative regulation of apoptotic process (ISO)

negative regulation of TOR signaling (ISO)

positive regulation of DNA-templated transcription (IBA,ISO)

positive regulation of hepatic stellate cell activation (ISO)

positive regulation of transcription by RNA polymerase II (ISO)

protein phosphorylation (ISO)

Cellular Component

cytoplasm (IBA)

cytosol (ISO)

glutamatergic synapse (ISO)

nucleoplasm (IBA,ISO)

nucleus (IEA)

postsynaptic density (ISO)

spindle (IDA)

synapse (EXP,IDA)

Molecular Function

ATP binding (IEA)

cysteine-type endopeptidase inhibitor activity involved in apoptotic process (ISO)

DNA-binding transcription factor binding (IPI)

kinase activity (IDA)

magnesium ion binding (IEA)

nucleotide binding (IEA)

protein binding (ISO)

protein kinase activity (IEA)

protein serine/threonine kinase activity (ISO)

protein serine/threonine/tyrosine kinase activity (ISO)

ribosomal protein S6 kinase activity (IBA)

transcription factor binding (ISO)

transferase activity (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

adenosine signaling pathway (ISO)

fibroblast growth factor signaling pathway (ISO)

long term potentiation (IEA)

mitogen activated protein kinase signaling pathway (IEA)

mTOR signaling pathway (IEA,ISO)

neurotrophic factor signaling pathway (IEA)

the extracellular signal-regulated Raf/Mek/Erk signaling pathway (ISO)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

decreased startle reflex (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	MAPKAP kinases - MKs - two's company, three's a crowd.	Gaestel M Nat Rev Mol Cell Biol. 2006 Feb;7(2):120-30.
2.	Functional annotation of a full-length mouse cDNA collection.	Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3.	Electronic Transfer of Homolog Data	MGD and Homologene mouse data transfer
4.	MGDs mouse GO annotations	MGD data from the GO Consortium
5.	Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
6.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
7.	PID Annotation Import Pipeline	Pipeline to import Pathway Interaction Database annotations from NCI into RGD
8.	SMPDB Annotation Import Pipeline	Pipeline to import SMPDB annotations from SMPDB into RGD
9.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
10.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:2779569	PMID:8262198	PMID:8524831	PMID:9560223	PMID:9858555	PMID:10349636	PMID:10635333	PMID:10862698	PMID:10922068	PMID:11042159	PMID:11076861	PMID:12393804
PMID:12477932	PMID:12520002	PMID:12618428	PMID:12769834	PMID:14610273	PMID:14622137	PMID:15009138	PMID:15107468	PMID:15226426	PMID:15305288	PMID:15327787	PMID:15509711
PMID:15741177	PMID:15782199	PMID:15893597	PMID:15895362	PMID:16141072	PMID:16141073	PMID:16602821	PMID:16738324	PMID:17043309	PMID:17494629	PMID:17664275	PMID:17938253
PMID:17967808	PMID:18799693	PMID:19114553	PMID:19570980	PMID:20515922	PMID:20557427	PMID:21148481	PMID:21267068	PMID:21421818	PMID:21609719	PMID:21677750	PMID:21873635
PMID:22006917	PMID:22041125	PMID:22130794	PMID:22794259	PMID:22797923	PMID:23209321	PMID:23243209	PMID:23624076	PMID:24307699	PMID:24416220	PMID:24457600	PMID:24552586
PMID:24967341	PMID:25211037	PMID:25332232	PMID:26401001	PMID:26410627	PMID:26848828	PMID:27063456	PMID:27246400	PMID:28162770	PMID:29229781	PMID:29473817	PMID:30586719
PMID:32325033	PMID:32581239	PMID:37068088

Genomics

Comparative Map Data

Rps6ka1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	133,574,601 - 133,615,466 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	133,574,601 - 133,615,108 (-)	Ensembl		GRCm39 Ensembl
GRCm38	4	133,847,290 - 133,887,797 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	133,847,290 - 133,887,797 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	133,403,205 - 133,443,714 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	133,119,370 - 133,159,860 (-)	NCBI		MGSCv36	mm8
Celera	4	132,018,889 - 132,060,783 (-)	NCBI		Celera
Cytogenetic Map	4	D2.3	NCBI
cM Map	4	66.37	NCBI

RPS6KA1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	26,529,761 - 26,575,025 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	26,529,761 - 26,575,030 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	26,856,252 - 26,901,516 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	26,728,836 - 26,774,107 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	26,540,390 - 26,585,662	NCBI
Celera	1	25,253,435 - 25,298,712 (+)	NCBI		Celera
Cytogenetic Map	1	p36.11	NCBI
HuRef	1	25,110,498 - 25,155,787 (+)	NCBI		HuRef
CHM1_1	1	26,969,231 - 27,014,507 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	26,367,713 - 26,412,979 (+)	NCBI		T2T-CHM13v2.0

Rps6ka1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	151,362,819 - 151,402,064 (-)	NCBI		GRCr8
mRatBN7.2	5	146,079,018 - 146,118,272 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	146,079,021 - 146,118,272 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	148,781,620 - 148,820,794 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	150,551,233 - 150,590,407 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	150,537,805 - 150,576,980 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	152,078,217 - 152,122,684 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	152,078,220 - 152,122,684 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	155,760,609 - 155,805,563 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	151,274,666 - 151,288,007 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	5	151,284,704 - 151,298,043 (+)	NCBI
Celera	5	144,500,101 - 144,539,235 (-)	NCBI		Celera
Cytogenetic Map	5	q36	NCBI

Rps6ka1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955452	5,904,762 - 5,939,091 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955452	5,905,561 - 5,938,096 (+)	NCBI	ChiLan1.0	ChiLan1.0

RPS6KA1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	200,294,769 - 200,340,289 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	199,395,353 - 199,440,930 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	25,792,428 - 25,837,950 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	26,856,061 - 26,900,532 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	26,856,057 - 26,900,532 (+)	Ensembl	panpan1.1		panPan2

RPS6KA1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	73,497,128 - 73,533,853 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	2	73,497,473 - 73,534,378 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	70,074,045 - 70,110,763 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	74,060,131 - 74,097,008 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	74,060,131 - 74,097,510 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	2	70,884,942 - 70,921,656 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	71,890,665 - 71,927,571 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	72,894,123 - 72,930,845 (-)	NCBI		UU_Cfam_GSD_1.0

Rps6ka1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	45,171,987 - 45,205,720 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936474	10,996,813 - 11,030,557 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936474	10,996,867 - 11,030,504 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RPS6KA1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	83,905,077 - 83,950,963 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	83,905,124 - 83,947,189 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	77,443,084 - 77,480,448 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RPS6KA1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	106,180,708 - 106,226,636 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	106,180,418 - 106,226,552 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666033	10,197,449 - 10,243,985 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rps6ka1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624764	10,526,948 - 10,569,910 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624764	10,527,012 - 10,566,625 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Rps6ka1
1492 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	2154
Count of miRNA genes:	637
Interacting mature miRNAs:	775
Transcripts:	ENSMUST00000003741, ENSMUST00000105894, ENSMUST00000129636, ENSMUST00000137486, ENSMUST00000157067, ENSMUST00000168974, ENSMUST00000173961, ENSMUST00000173989, ENSMUST00000174481
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
11567249	Elorr3_m	ethanol induced loss of righting response 3 (mouse)					4	3722677	156268235	Mouse
1357895	Ctrcts_m	cataract severity (mouse)			Not determined		4	45709925	138342753	Mouse
26884437	Sklq13_m	skull length QTL 13, 16 week (mouse)					4	57700000	155684457	Mouse
25314312	Syncl2_m	synaptonemal complex length 2 (mouse)					4	65718237	146584457	Mouse
26884445	Sklq7_m	skull length QTL 7, 10 week (mouse)					4	68018237	150884457	Mouse
4141623	W6q13_m	weight 6 weeks QTL 13 (mouse)			Not determined			88982069	140468203	Mouse
4141549	W10q10_m	weight 10 weeks QTL 10 (mouse)			Not determined			88982069	140468203	Mouse
4141093	W3q17_m	weight 3 weeks QTL 17 (mouse)			Not determined			88982069	140468203	Mouse
39128212	Lwq21_m	liver weight QTL 21 (mouse)					4	88982069	140468203	Mouse
1301823	Bmd7_m	bone mineral density 7 (mouse)			Not determined		4	88982069	151654550	Mouse
13208562	Wght7_m	weight 7 (mouse)					4	90888237	148084457	Mouse
1301815	Sles2_m	systemic lupus erythmatosus suppressor 2 (mouse)			Not determined		4	94957579	150676858	Mouse
1301106	Skts7_m	skin tumor susceptibility 7 (mouse)			Not determined		4	100071971	134072206	Mouse
1301847	Fecq2_m	fecundity QTL 2 (mouse)			Not determined		4	100071971	134072206	Mouse
12880433	Fgf23lq1_m	FGF23 serum level QTL 1 (mouse)					4	101157197	135157197	Mouse
15039377	Bw45_m	body weight QTL 45 (mouse)					4	105705794	139705794	Mouse
15039378	Adip30_m	adiposity 30 (mouse)					4	105705794	139705794	Mouse
15039382	Ltgq7_m	liver triglyceride QTL 7 (mouse)					4	105705794	139705794	Mouse
12910794	Pwbwq8_m	post-weaning body weight QTL 8 (mouse)					4	105835310	141433838	Mouse
12910797	Pwgrq4_m	pre-weaning growth rate QTL 4 (mouse)					4	105835310	141433838	Mouse
12910808	Pwbwq9_m	post-weaning body weight QTL 9 (mouse)					4	105835310	141433838	Mouse
12910813	Pwbwq4_m	pre-weaning body weight QTL 4 (mouse)					4	105835310	141433838	Mouse
1357800	Tgq3_m	triglyceride QTL 3 (mouse)			Not determined		4	107055093	141055180	Mouse
1300809	Ccrs2_m	corpus callosum hemisphere surface size 2 (mouse)			Not determined		4	107264957	141265153	Mouse
1300781	Lith8_m	lithogenic gene 8 (mouse)			Not determined		4	107264957	141265153	Mouse
1300663	Start2_m	startle response 2 (mouse)			Not determined		4	107264957	141265153	Mouse
1301382	Arvm2_m	autoimmune renal vasculitis 2 (mouse)			Not determined		4	107791564	141791756	Mouse
10755522	Hgb1_m	hemoglobin 1 (mouse)					4	108477692	142477692	Mouse
10755521	Hct1_m	hematocrit 1 (mouse)					4	108477692	142477692	Mouse
10755520	Rbc1_m	red blood cell count 1 (mouse)					4	108477692	142477692	Mouse
1300839	Dyscalc2_m	dystrophic cardiac calcinosis 2 (mouse)			Not determined		4	111009051	145009280	Mouse
1300743	Skull6_m	skull morphology 6 (mouse)			Not determined		4	111009051	145009280	Mouse
15039385	Mvlq3_m	macrovesicular liver lesion QTL 3 (mouse)					4	112182386	146182386	Mouse
4141001	Tgq17_m	triglyceride QTL 17 (mouse)			Not determined			112523489	146523489	Mouse
10047132	Albq19_m	albuminuria QTL 19 (mouse)			Not determined		4	112824389	146824389	Mouse
4142493	Femwf13_m	femur work to failure 13 (mouse)			Not determined			116154678	150154782	Mouse
1302078	Sluc21_m	susceptibility to lung cancer 21 (mouse)			Not determined		4	117401141	151401275	Mouse
14746982	Manh56_m	mandible shape 56 (mouse)					4	117815917	151815917	Mouse
1302102	Bis1_m	beta-carboline-induced seizures 1 (mouse)			Not determined		4	119864433	153864536	Mouse
1301964	Bw8q2_m	body weight at 8 weeks QTL 2 (mouse)			Not determined		4	119864433	153864536	Mouse
13503348	Bntq18_m	bone traits QTL 18 (mouse)					4	120617848	154617995	Mouse
10412210	Cypr6_m	cytokine production 6 (mouse)			Not determined		4	120617848	154617995	Mouse
4141180	Ssic1_m	susceptibility to small intestinal cancer 1 (mouse)			Not determined			120674005	154674151	Mouse
1300803	Sluc6_m	susceptibility to lung cancer 6 (mouse)			Not determined		4	120674005	154674151	Mouse
10043985	Stheal12_m	soft tissue heal 12 (mouse)			Not determined		4	121342649	155342753	Mouse
4142061	Chlq16_m	circulating hormone level QTL 16 (mouse)			Not determined		4	121342649	155342753	Mouse
1301452	Elsgp1_m	elevated serum gp70 1 (mouse)			Not determined		4	121342649	155342753	Mouse
27226757	Femd1_m	femur midshaft diameter 1, 5 week (mouse)					4	123993793	144326570	Mouse
4141065	Shali2_m	survival time to hyperoxic acute lung injury 2 (mouse)			Not determined			124055093	141572792	Mouse
1300917	Gasa1_m	gastritis type A susceptibility locus 1 (mouse)			Not determined		4	124055093	142438020	Mouse
1302149	Tlsr2_m	thymic lymphoma suppressor region 2 (mouse)			Not determined		4	124264957	142230960	Mouse
1301525	Lmb1_m	lupus in MRL and B6 F2 cross (mouse)			Not determined		4	124264957	150676858	Mouse
10755531	Lymph3_m	lymphocyte differential 3 (mouse)					4	124553483	156860686	Mouse
1300858	Tafat_m	tally ho associated mesenteric fat pad weight (mouse)			Not determined		4	124621281	156860686	Mouse
4142139	Adip12_m	adiposity 12 (mouse)			Not determined		4	124621281	156860686	Mouse
1301982	Pltiq1_m	phospholipid transfer protein inducibility QTL 1 (mouse)			Not determined		4	124621281	156860686	Mouse
1300933	Cdcs9_m	cytokine deficiency colitis susceptibility 9 (mouse)			Not determined		4	125230872	156860686	Mouse
1300621	Tpnr1_m	thermal pain response 1 (mouse)			Not determined		4	125230872	156860686	Mouse
10045620	Heal22_m	wound healing/regeneration 22 (mouse)			Not determined		4	125230872	156860686	Mouse
11533916	Mts1_m	mammary tumor susceptibility 1 (mouse)					4	125289325	156860686	Mouse
10043996	Gct5_m	granulosa cell tumorigenesis 5 (mouse)			Not determined		4	127784226	156860686	Mouse
4142481	Gct1_m	granulosa cell tumorigenesis 1 (mouse)			Not determined		4	127784226	156860686	Mouse
1301793	Tlsr3_m	thymic lymphoma suppressor region 3 (mouse)			Not determined		4	129465811	136864536	Mouse
1301584	Lrdg2_m	light induced retinal degeneration 2 (mouse)			Not determined		4	129465811	151654550	Mouse
25394568	Skmw56_m	skeletal muscle weight 56, EDL (mouse)					4	129859344	133710576	Mouse
12904009	Cfq9_m	conditioned fear QTL 9 (mouse)					4	130036287	133772722	Mouse
25394567	Skmw55_m	skeletal muscle weight 55, gastroc (mouse)					4	131437804	133710576	Mouse
4141154	Nba1_m	New Zealand Black autoimmunity 1 (mouse)			Not determined			131650724	140879275	Mouse
14696808	Rbcn1_m	rod bipolar cell number 1 (mouse)					4	131947311	134047311	Mouse
1300874	Gasa2_m	gastritis type A susceptibility locus 2 (mouse)			Not determined		4	133010494	156860686	Mouse
4142082	Psds2_m	psoriasis-like skin disease severity 2 (mouse)			Not determined		4	133154678	137617995	Mouse
1301267	Bcmd2_m	B cell maturation defect 2 (mouse)			Not determined		4	133154678	150789451	Mouse

Markers in Region

Rps6ka1

Mouse Assembly	Chr	Position (strand)	Source
Celera	4	132,019,243 - 132,019,638	UniSTS
Cytogenetic Map	4	D3	UniSTS
cM Map	4		UniSTS

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001285505	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001285506	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001378880	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_009097	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_036163924	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AF084468	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK132856	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK148208	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK160571	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK167790	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK179546	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK187369	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK187954	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK210375	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK213589	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK214145	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL837508	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC049076	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC094470	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BY226173	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BY737295	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CA547794	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466552	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	M28489	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSMUST00000003741 ⟹ ENSMUSP00000003741

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	4	133,574,605 - 133,615,095 (-)	Ensembl
GRCm38.p6 Ensembl	4	133,847,294 - 133,887,784 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000105894 ⟹ ENSMUSP00000101514

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	4	133,574,601 - 133,615,108 (-)	Ensembl
GRCm38.p6 Ensembl	4	133,847,290 - 133,887,797 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000129636

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	4	133,587,476 - 133,588,353 (-)	Ensembl
GRCm38.p6 Ensembl	4	133,860,165 - 133,861,042 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000137486 ⟹ ENSMUSP00000119328

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	4	133,575,363 - 133,600,350 (-)	Ensembl
GRCm38.p6 Ensembl	4	133,848,052 - 133,873,039 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000157067 ⟹ ENSMUSP00000121341

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	4	133,575,136 - 133,599,624 (-)	Ensembl
GRCm38.p6 Ensembl	4	133,847,825 - 133,872,313 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000168974 ⟹ ENSMUSP00000126774

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	4	133,574,605 - 133,602,042 (-)	Ensembl
GRCm38.p6 Ensembl	4	133,847,294 - 133,874,731 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000173961

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	4	133,599,275 - 133,614,885 (-)	Ensembl
GRCm38.p6 Ensembl	4	133,871,964 - 133,887,574 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000173989

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	4	133,577,868 - 133,588,241 (-)	Ensembl
GRCm38.p6 Ensembl	4	133,850,557 - 133,860,930 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000174481 ⟹ ENSMUSP00000134507

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	4	133,575,274 - 133,613,594 (-)	Ensembl
GRCm38.p6 Ensembl	4	133,847,963 - 133,886,283 (-)	Ensembl

RefSeq Acc Id:

NM_001285505 ⟹ NP_001272434

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	4	133,574,601 - 133,615,108 (-)	NCBI
GRCm38	4	133,847,290 - 133,887,797 (-)	NCBI
Celera	4	132,018,889 - 132,060,781 (-)	NCBI

Sequence:

show sequence

AGCGAGCCGAAGTGCGAGTGCCGCGGCGGCGGCGGACGGCCCATCCAGAGCGCGAGGGGCTCAG
GGGCGTGCGGGGGTCTCGGTGTAGCAGCAGGGACCCCGTGGCCCAGAGGCAGCGCTGCCCGGGG
CCGCCGGGAGGAGCGCGGGCGGTCCGGCAGCGGCGCGATGCCGCTCGCCCAGCTCAAGGAGCCC
TGGCCGCTCATGGAGCTGGTGCCGCTGGACCCGGAGAATGGCCAGACTTCAGGGGAAGAAGCTG
GACTTCAGCCATCCAAGGATGAGGCCATCCTCAAGGAGATCTCCATCACACACCACGTCAAGGC
TGGCTCTGAGAAGGCCGATCCATCCCAGTTTGAGCTCCTCAAGGTTCTGGGCCAAGGATCCTTT
GGCAAAGTCTTCCTGGTACGCAAGGTCACCCGGCCTGACAGTGGGCACTTGTATGCCATGAAAG
TATTAAAGAAGGCCACGCTGAAAGTGCGTGACCGTGTTCGGACCAAGATGGAGAGAGACATCCT
CGCTGACGTGAACCACCCGTTCGTGGTGAAGCTACATTATGCCTTCCAGACCGAGGGCAAGCTC
TATCTTATTCTGGACTTCCTGCGTGGTGGAGACCTGTTCACACGGCTCTCAAAGGAGGTCATGT
TTACAGAGGAGGATGTGAAGTTTTACCTGGCTGAGCTGGCACTGGGCCTGGACCACCTGCACAG
CTTGGGCATTATTTACAGAGACCTCAAGCCTGAGAATATCCTTTTGGATGAGGAGGGCCACATC
AAACTCACTGACTTTGGCCTGAGCAAGGAGGCCATAGACCATGAGAAGAAGGCTTACTCCTTCT
GCGGGACAGTGGAGTACATGGCGCCCGAGGTTGTCAACCGCCAGGGTCACACCCACAGTGCAGA
CTGGTGGTCCTATGGGGTGCTGATGGGGAAGGACCGGAAGGAGACCATGACCTTGATTTTGAAG
GCGAAGCTAGGCATGCCCCAGTTTCTGAGCACGGAAGCCCAGAGCCTCCTGCGGGCCCTGTTCA
AGAGGAATCCTGCCAATCGGCTTGGCTCGGGCCCTGATGGGGCAGAGGAAATTAAGAGACATAT
CTTCTACTCCACCATTGACTGGAATAAGCTCTACCGGCGTGAGATCAAGCCCCCTTTCAAGCCG
GCTGTGGCCCAGCCCGACGACACCTTCTACTTTGATACCGAGTTCACGTCACGCACACCCAGGG
ATTCGCCAGGCATCCCTCCCAGTGCTGGTGCCCATCAGCTGTTCCGTGGCTTCAGCTTCGTGGC
CACTGGTCTGATGGAGGACGACGGCAAGCCTCGGACCACTCAGGCCCCCCTACACTCGGTGGTA
CAGCAACTCCACGGGAAGAACTTGGTTTTCAGTGACGGCTACGTAGTAAAGGAGACGATCGGCG
TGGGCTCCTACTCTGTGTGTAAGCGTTGTGTCCACAAGGCCACCAACATGGAGTATGCTGTCAA
GGTCATCGACAAGAGCAAAAGAGATCCCTCAGAAGAGATTGAGATTCTTCTGCGGTATGGCCAG
CACCCCAACATCATCACCCTGAAAGATGTGTACGATGATGGTAAGCACGTGTACCTGGTGACAG
AGCTGATGAGGGGCGGCGAGCTGCTGGATAAGATCCTACGGCAGAAATTCTTCTCAGAGCGGGA
GGCCAGCTTCGTCCTGCACACGATCAGCAAGACTGTGGAATACTTGCACTCTCAAGGGGTTGTC
CACAGAGATCTCAAACCCAGTAACATCCTCTATGTGGATGAGTCTGGGAACCCCGAGTGCCTGC
GCATCTGCGACTTTGGCTTTGCCAAGCAGCTACGGGCCGAGAACGGACTCCTCATGACACCTTG
CTACACAGCCAACTTTGTGGCACCTGAGGTGCTGAAGCGCCAGGGCTACGATGAAGGCTGTGAC
ATATGGAGCCTGGGCATTCTGCTGTACACGATGCTGGCAGGATACACTCCATTTGCCAATGGGC
CCAGTGACACCCCAGAGGAGATCCTCACCCGGATCGGCAGCGGGAAGTTCACCCTCAGTGGGGG
AAACTGGAACACGGTTTCAGAGACAGCCAAGGACTTGGTATCTAAGATGCTGCATGTGGACCCC
CACCAGCGCCTCACAGCCAAGCAGGTCCTGCAGCACCCATGGATCACCCAGAAAGACAAGCTTC
CCCAGAGCCAGTTGTCCCACCAAGACCTGCAGCTCGTGAAGGGAGCCATGGCGGCTACATACTC
TGCTCTCAATAGCTCCAAACCCACCCCTCAGCTCAAGCCAATTGAGTCGTCTATCCTGGCCCAG
CGGCGGGTGAGGAAGCTGCCATCCACCACCCTGTGAGCCGCAGACGAACTCCTCAGAGGCAGAG
TCCTTCCCAGAGACAGCAAGCCTGGGTCACAGGACCAAGTGGAATGGAGTTCTAAAGGAAGTAA
CCAGCCCAGATCACCCGTGAGGGTGTGACGTGCCTTCCTCCCCGGGACGGGCTCTTCTGGGCTC
AGGCTCCACCGTGTGAAAGCCACTCACTGTACAAACTATTTTTTAAGGAAAAAAAAATGGCGTC
ATCTCCCATGAATTTTTTACAAGATCCATTTGCCTTCTTGGCCATCGCAGTCCCAGCAGTCCCA
GGAGGAACGACGAGTCACATGTGTGGCCGAGACTCCCTTGGTAGCTTTGGGGCCCTCTCCGCTG
TTGGCCGTGGGGCCATCTGCACATGACTTCGAGCAGGTCCAGCGTCGCCTCTCAGAGCTGTCTC
CTGGCTCCTCAGCAGAACTTGGTCCCCAGCCATCTCTTTTTCCGTTCTGTTCTGGGGTTCTAGA
ACCACTTTCTGCTAGAGCAAGGGACCCCACCCTGTCAGCTCTTGGCTCCAGGCACCAGCATCCA
CAACGCCCATCCTCGGTGGGTCCCTGCGGTGGGATCGGACAACCCCATGGAGAGGAAGCAGAAA
GCACTTTTGGGGAAACCTGCTGTCTGCCGCTAGACAGAGTTCACAGGAGACCAGGGAGGCGGTC
CCCGGGCGATGAGGGCTTTTTCATTTCCTCCTCAGCTGGTAACTCAGGGTTCATCTGTCCAAGG
CCTTTCTAATAAACTTACAATCCAGTTAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NM_001285506 ⟹ NP_001272435

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	4	133,574,601 - 133,602,042 (-)	NCBI
GRCm38	4	133,847,290 - 133,874,731 (-)	NCBI
Celera	4	132,018,889 - 132,060,781 (-)	NCBI

Sequence:

show sequence

AGGCTAAAAAAAGCAGAAGTTGTAGGAGTCAGAGGCCCCTCTGGTCACCGGCCTGAGCCCCACC
ATGCAAACACCCGCCGATTTCCCTAGGGTTGAGAGAGACTCCGGCTTCTATCCCAGAAAGGATG
AGGCCATCCTCAAGGAGATCTCCATCACACACCACGTCAAGGCTGGCTCTGAGAAGGCCGATCC
ATCCCAGTTTGAGCTCCTCAAGGTTCTGGGCCAAGGATCCTTTGGCAAAGTCTTCCTGGTACGC
AAGGTCACCCGGCCTGACAGTGGGCACTTGTATGCCATGAAAGTATTAAAGAAGGCCACGCTGA
AAGTGCGTGACCGTGTTCGGACCAAGATGGAGAGAGACATCCTCGCTGACGTGAACCACCCGTT
CGTGGTGAAGCTACATTATGCCTTCCAGACCGAGGGCAAGCTCTATCTTATTCTGGACTTCCTG
CGTGGTGGAGACCTGTTCACACGGCTCTCAAAGGAGGTCATGTTTACAGAGGAGGATGTGAAGT
TTTACCTGGCTGAGCTGGCACTGGGCCTGGACCACCTGCACAGCTTGGGCATTATTTACAGAGA
CCTCAAGCCTGAGAATATCCTTTTGGATGAGGAGGGCCACATCAAACTCACTGACTTTGGCCTG
AGCAAGGAGGCCATAGACCATGAGAAGAAGGCTTACTCCTTCTGCGGGACAGTGGAGTACATGG
CGCCCGAGGTTGTCAACCGCCAGGGTCACACCCACAGTGCAGACTGGTGGTCCTATGGGGTGCT
GATGTTTGAGATGCTGACGGGCTCCCTGCCCTTCCAGGGGAAGGACCGGAAGGAGACCATGACC
TTGATTTTGAAGGCGAAGCTAGGCATGCCCCAGTTTCTGAGCACGGAAGCCCAGAGCCTCCTGC
GGGCCCTGTTCAAGAGGAATCCTGCCAATCGGCTTGGCTCGGGCCCTGATGGGGCAGAGGAAAT
TAAGAGACATATCTTCTACTCCACCATTGACTGGAATAAGCTCTACCGGCGTGAGATCAAGCCC
CCTTTCAAGCCGGCTGTGGCCCAGCCCGACGACACCTTCTACTTTGATACCGAGTTCACGTCAC
GCACACCCAGGGATTCGCCAGGCATCCCTCCCAGTGCTGGTGCCCATCAGCTGTTCCGTGGCTT
CAGCTTCGTGGCCACTGGTCTGATGGAGGACGACGGCAAGCCTCGGACCACTCAGGCCCCCCTA
CACTCGGTGGTACAGCAACTCCACGGGAAGAACTTGGTTTTCAGTGACGGCTACGTAGTAAAGG
AGACGATCGGCGTGGGCTCCTACTCTGTGTGTAAGCGTTGTGTCCACAAGGCCACCAACATGGA
GTATGCTGTCAAGGTCATCGACAAGAGCAAAAGAGATCCCTCAGAAGAGATTGAGATTCTTCTG
CGGTATGGCCAGCACCCCAACATCATCACCCTGAAAGATGTGTACGATGATGGTAAGCACGTGT
ACCTGGTGACAGAGCTGATGAGGGGCGGCGAGCTGCTGGATAAGATCCTACGGCAGAAATTCTT
CTCAGAGCGGGAGGCCAGCTTCGTCCTGCACACGATCAGCAAGACTGTGGAATACTTGCACTCT
CAAGGGGTTGTCCACAGAGATCTCAAACCCAGTAACATCCTCTATGTGGATGAGTCTGGGAACC
CCGAGTGCCTGCGCATCTGCGACTTTGGCTTTGCCAAGCAGCTACGGGCCGAGAACGGACTCCT
CATGACACCTTGCTACACAGCCAACTTTGTGGCACCTGAGGTGCTGAAGCGCCAGGGCTACGAT
GAAGGCTGTGACATATGGAGCCTGGGCATTCTGCTGTACACGATGCTGGCAGGATACACTCCAT
TTGCCAATGGGCCCAGTGACACCCCAGAGGAGATCCTCACCCGGATCGGCAGCGGGAAGTTCAC
CCTCAGTGGGGGAAACTGGAACACGGTTTCAGAGACAGCCAAGGACTTGGTATCTAAGATGCTG
CATGTGGACCCCCACCAGCGCCTCACAGCCAAGCAGGTCCTGCAGCACCCATGGATCACCCAGA
AAGACAAGCTTCCCCAGAGCCAGTTGTCCCACCAAGACCTGCAGCTCGTGAAGGGAGCCATGGC
GGCTACATACTCTGCTCTCAATAGCTCCAAACCCACCCCTCAGCTCAAGCCAATTGAGTCGTCT
ATCCTGGCCCAGCGGCGGGTGAGGAAGCTGCCATCCACCACCCTGTGAGCCGCAGACGAACTCC
TCAGAGGCAGAGTCCTTCCCAGAGACAGCAAGCCTGGGTCACAGGACCAAGTGGAATGGAGTTC
TAAAGGAAGTAACCAGCCCAGATCACCCGTGAGGGTGTGACGTGCCTTCCTCCCCGGGACGGGC
TCTTCTGGGCTCAGGCTCCACCGTGTGAAAGCCACTCACTGTACAAACTATTTTTTAAGGAAAA
AAAAATGGCGTCATCTCCCATGAATTTTTTACAAGATCCATTTGCCTTCTTGGCCATCGCAGTC
CCAGCAGTCCCAGGAGGAACGACGAGTCACATGTGTGGCCGAGACTCCCTTGGTAGCTTTGGGG
CCCTCTCCGCTGTTGGCCGTGGGGCCATCTGCACATGACTTCGAGCAGGTCCAGCGTCGCCTCT
CAGAGCTGTCTCCTGGCTCCTCAGCAGAACTTGGTCCCCAGCCATCTCTTTTTCCGTTCTGTTC
TGGGGTTCTAGAACCACTTTCTGCTAGAGCAAGGGACCCCACCCTGTCAGCTCTTGGCTCCAGG
CACCAGCATCCACAACGCCCATCCTCGGTGGGTCCCTGCGGTGGGATCGGACAACCCCATGGAG
AGGAAGCAGAAAGCACTTTTGGGGAAACCTGCTGTCTGCCGCTAGACAGAGTTCACAGGAGACC
AGGGAGGCGGTCCCCGGGCGATGAGGGCTTTTTCATTTCCTCCTCAGCTGGTAACTCAGGGTTC
ATCTGTCCAAGGCCTTTCTAATAAACTTACAATCCAGTTAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NM_001378880 ⟹ NP_001365809

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	4	133,574,601 - 133,600,346 (-)	NCBI
GRCm38	4	133,847,290 - 133,873,035 (-)	NCBI

Sequence:

show sequence

ACCTCCTTGGCAGCCCCAGTGGGTTGTTGCTTACCCTTGCCATGGTGCTGTGGCCCTGCCGGGC
GGATGGAGCAGGACCCCAAGCTGCCCCGTCTGCGGCTCAGGACCCTGCTCCCTTGGCTGCTCGG
GAAACAGCGGTCCAGGATCAGCCAGACTCTGCCTGGCCCTGGCCCTGGTCCCCAGCAGGACTCG
GATGAGGCCATCCTCAAGGAGATCTCCATCACACACCACGTCAAGGCTGGCTCTGAGAAGGCCG
ATCCATCCCAGTTTGAGCTCCTCAAGGTTCTGGGCCAAGGATCCTTTGGCAAAGTCTTCCTGGT
ACGCAAGGTCACCCGGCCTGACAGTGGGCACTTGTATGCCATGAAAGTATTAAAGAAGGCCACG
CTGAAAGTGCGTGACCGTGTTCGGACCAAGATGGAGAGAGACATCCTCGCTGACGTGAACCACC
CGTTCGTGGTGAAGCTACATTATGCCTTCCAGACCGAGGGCAAGCTCTATCTTATTCTGGACTT
CCTGCGTGGTGGAGACCTGTTCACACGGCTCTCAAAGGAGGTCATGTTTACAGAGGAGGATGTG
AAGTTTTACCTGGCTGAGCTGGCACTGGGCCTGGACCACCTGCACAGCTTGGGCATTATTTACA
GAGACCTCAAGCCTGAGAATATCCTTTTGGATGAGGAGGGCCACATCAAACTCACTGACTTTGG
CCTGAGCAAGGAGGCCATAGACCATGAGAAGAAGGCTTACTCCTTCTGCGGGACAGTGGAGTAC
ATGGCGCCCGAGGTTGTCAACCGCCAGGGTCACACCCACAGTGCAGACTGGTGGTCCTATGGGG
TGCTGATGTTTGAGATGCTGACGGGCTCCCTGCCCTTCCAGGGGAAGGACCGGAAGGAGACCAT
GACCTTGATTTTGAAGGCGAAGCTAGGCATGCCCCAGTTTCTGAGCACGGAAGCCCAGAGCCTC
CTGCGGGCCCTGTTCAAGAGGAATCCTGCCAATCGGCTTGGCTCGGGCCCTGATGGGGCAGAGG
AAATTAAGAGACATATCTTCTACTCCACCATTGACTGGAATAAGCTCTACCGGCGTGAGATCAA
GCCCCCTTTCAAGCCGGCTGTGGCCCAGCCCGACGACACCTTCTACTTTGATACCGAGTTCACG
TCACGCACACCCAGGGATTCGCCAGGCATCCCTCCCAGTGCTGGTGCCCATCAGCTGTTCCGTG
GCTTCAGCTTCGTGGCCACTGGTCTGATGGAGGACGACGGCAAGCCTCGGACCACTCAGGCCCC
CCTACACTCGGTGGTACAGCAACTCCACGGGAAGAACTTGGTTTTCAGTGACGGCTACGTAGTA
AAGGAGACGATCGGCGTGGGCTCCTACTCTGTGTGTAAGCGTTGTGTCCACAAGGCCACCAACA
TGGAGTATGCTGTCAAGGTCATCGACAAGAGCAAAAGAGATCCCTCAGAAGAGATTGAGATTCT
TCTGCGGTATGGCCAGCACCCCAACATCATCACCCTGAAAGATGTGTACGATGATGGTAAGCAC
GTGTACCTGGTGACAGAGCTGATGAGGGGCGGCGAGCTGCTGGATAAGATCCTACGGCAGAAAT
TCTTCTCAGAGCGGGAGGCCAGCTTCGTCCTGCACACGATCAGCAAGACTGTGGAATACTTGCA
CTCTCAAGGGGTTGTCCACAGAGATCTCAAACCCAGTAACATCCTCTATGTGGATGAGTCTGGG
AACCCCGAGTGCCTGCGCATCTGCGACTTTGGCTTTGCCAAGCAGCTACGGGCCGAGAACGGAC
TCCTCATGACACCTTGCTACACAGCCAACTTTGTGGCACCTGAGGTGCTGAAGCGCCAGGGCTA
CGATGAAGGCTGTGACATATGGAGCCTGGGCATTCTGCTGTACACGATGCTGGCAGGATACACT
CCATTTGCCAATGGGCCCAGTGACACCCCAGAGGAGATCCTCACCCGGATCGGCAGCGGGAAGT
TCACCCTCAGTGGGGGAAACTGGAACACGGTTTCAGAGACAGCCAAGGACTTGGTATCTAAGAT
GCTGCATGTGGACCCCCACCAGCGCCTCACAGCCAAGCAGGTCCTGCAGCACCCATGGATCACC
CAGAAAGACAAGCTTCCCCAGAGCCAGTTGTCCCACCAAGACCTGCAGCTCGTGAAGGGAGCCA
TGGCGGCTACATACTCTGCTCTCAATAGCTCCAAACCCACCCCTCAGCTCAAGCCAATTGAGTC
GTCTATCCTGGCCCAGCGGCGGGTGAGGAAGCTGCCATCCACCACCCTGTGAGCCGCAGACGAA
CTCCTCAGAGGCAGAGTCCTTCCCAGAGACAGCAAGCCTGGGTCACAGGACCAAGTGGAATGGA
GTTCTAAAGGAAGTAACCAGCCCAGATCACCCGTGAGGGTGTGACGTGCCTTCCTCCCCGGGAC
GGGCTCTTCTGGGCTCAGGCTCCACCGTGTGAAAGCCACTCACTGTACAAACTATTTTTTAAGG
AAAAAAAAATGGCGTCATCTCCCATGAATTTTTTACAAGATCCATTTGCCTTCTTGGCCATCGC
AGTCCCAGCAGTCCCAGGAGGAACGACGAGTCACATGTGTGGCCGAGACTCCCTTGGTAGCTTT
GGGGCCCTCTCCGCTGTTGGCCGTGGGGCCATCTGCACATGACTTCGAGCAGGTCCAGCGTCGC
CTCTCAGAGCTGTCTCCTGGCTCCTCAGCAGAACTTGGTCCCCAGCCATCTCTTTTTCCGTTCT
GTTCTGGGGTTCTAGAACCACTTTCTGCTAGAGCAAGGGACCCCACCCTGTCAGCTCTTGGCTC
CAGGCACCAGCATCCACAACGCCCATCCTCGGTGGGTCCCTGCGGTGGGATCGGACAACCCCAT
GGAGAGGAAGCAGAAAGCACTTTTGGGGAAACCTGCTGTCTGCCGCTAGACAGAGTTCACAGGA
GACCAGGGAGGCGGTCCCCGGGCGATGAGGGCTTTTTCATTTCCTCCTCAGCTGGTAACTCAGG
GTTCATCTGTCCAAGGCCTTTCTAATAAACTTACAATCCAGTTAAA

hide sequence

RefSeq Acc Id:

NM_009097 ⟹ NP_033123

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	4	133,574,601 - 133,615,108 (-)	NCBI
GRCm38	4	133,847,290 - 133,887,797 (-)	NCBI
MGSCv37	4	133,403,205 - 133,443,714 (-)	RGD
Celera	4	132,018,889 - 132,060,781 (-)	NCBI
cM Map	4		ENTREZGENE

Sequence:

show sequence

AGCGAGCCGAAGTGCGAGTGCCGCGGCGGCGGCGGACGGCCCATCCAGAGCGCGAGGGGCTCAG
GGGCGTGCGGGGGTCTCGGTGTAGCAGCAGGGACCCCGTGGCCCAGAGGCAGCGCTGCCCGGGG
CCGCCGGGAGGAGCGCGGGCGGTCCGGCAGCGGCGCGATGCCGCTCGCCCAGCTCAAGGAGCCC
TGGCCGCTCATGGAGCTGGTGCCGCTGGACCCGGAGAATGGCCAGACTTCAGGGGAAGAAGCTG
GACTTCAGCCATCCAAGGATGAGGCCATCCTCAAGGAGATCTCCATCACACACCACGTCAAGGC
TGGCTCTGAGAAGGCCGATCCATCCCAGTTTGAGCTCCTCAAGGTTCTGGGCCAAGGATCCTTT
GGCAAAGTCTTCCTGGTACGCAAGGTCACCCGGCCTGACAGTGGGCACTTGTATGCCATGAAAG
TATTAAAGAAGGCCACGCTGAAAGTGCGTGACCGTGTTCGGACCAAGATGGAGAGAGACATCCT
CGCTGACGTGAACCACCCGTTCGTGGTGAAGCTACATTATGCCTTCCAGACCGAGGGCAAGCTC
TATCTTATTCTGGACTTCCTGCGTGGTGGAGACCTGTTCACACGGCTCTCAAAGGAGGTCATGT
TTACAGAGGAGGATGTGAAGTTTTACCTGGCTGAGCTGGCACTGGGCCTGGACCACCTGCACAG
CTTGGGCATTATTTACAGAGACCTCAAGCCTGAGAATATCCTTTTGGATGAGGAGGGCCACATC
AAACTCACTGACTTTGGCCTGAGCAAGGAGGCCATAGACCATGAGAAGAAGGCTTACTCCTTCT
GCGGGACAGTGGAGTACATGGCGCCCGAGGTTGTCAACCGCCAGGGTCACACCCACAGTGCAGA
CTGGTGGTCCTATGGGGTGCTGATGTTTGAGATGCTGACGGGCTCCCTGCCCTTCCAGGGGAAG
GACCGGAAGGAGACCATGACCTTGATTTTGAAGGCGAAGCTAGGCATGCCCCAGTTTCTGAGCA
CGGAAGCCCAGAGCCTCCTGCGGGCCCTGTTCAAGAGGAATCCTGCCAATCGGCTTGGCTCGGG
CCCTGATGGGGCAGAGGAAATTAAGAGACATATCTTCTACTCCACCATTGACTGGAATAAGCTC
TACCGGCGTGAGATCAAGCCCCCTTTCAAGCCGGCTGTGGCCCAGCCCGACGACACCTTCTACT
TTGATACCGAGTTCACGTCACGCACACCCAGGGATTCGCCAGGCATCCCTCCCAGTGCTGGTGC
CCATCAGCTGTTCCGTGGCTTCAGCTTCGTGGCCACTGGTCTGATGGAGGACGACGGCAAGCCT
CGGACCACTCAGGCCCCCCTACACTCGGTGGTACAGCAACTCCACGGGAAGAACTTGGTTTTCA
GTGACGGCTACGTAGTAAAGGAGACGATCGGCGTGGGCTCCTACTCTGTGTGTAAGCGTTGTGT
CCACAAGGCCACCAACATGGAGTATGCTGTCAAGGTCATCGACAAGAGCAAAAGAGATCCCTCA
GAAGAGATTGAGATTCTTCTGCGGTATGGCCAGCACCCCAACATCATCACCCTGAAAGATGTGT
ACGATGATGGTAAGCACGTGTACCTGGTGACAGAGCTGATGAGGGGCGGCGAGCTGCTGGATAA
GATCCTACGGCAGAAATTCTTCTCAGAGCGGGAGGCCAGCTTCGTCCTGCACACGATCAGCAAG
ACTGTGGAATACTTGCACTCTCAAGGGGTTGTCCACAGAGATCTCAAACCCAGTAACATCCTCT
ATGTGGATGAGTCTGGGAACCCCGAGTGCCTGCGCATCTGCGACTTTGGCTTTGCCAAGCAGCT
ACGGGCCGAGAACGGACTCCTCATGACACCTTGCTACACAGCCAACTTTGTGGCACCTGAGGTG
CTGAAGCGCCAGGGCTACGATGAAGGCTGTGACATATGGAGCCTGGGCATTCTGCTGTACACGA
TGCTGGCAGGATACACTCCATTTGCCAATGGGCCCAGTGACACCCCAGAGGAGATCCTCACCCG
GATCGGCAGCGGGAAGTTCACCCTCAGTGGGGGAAACTGGAACACGGTTTCAGAGACAGCCAAG
GACTTGGTATCTAAGATGCTGCATGTGGACCCCCACCAGCGCCTCACAGCCAAGCAGGTCCTGC
AGCACCCATGGATCACCCAGAAAGACAAGCTTCCCCAGAGCCAGTTGTCCCACCAAGACCTGCA
GCTCGTGAAGGGAGCCATGGCGGCTACATACTCTGCTCTCAATAGCTCCAAACCCACCCCTCAG
CTCAAGCCAATTGAGTCGTCTATCCTGGCCCAGCGGCGGGTGAGGAAGCTGCCATCCACCACCC
TGTGAGCCGCAGACGAACTCCTCAGAGGCAGAGTCCTTCCCAGAGACAGCAAGCCTGGGTCACA
GGACCAAGTGGAATGGAGTTCTAAAGGAAGTAACCAGCCCAGATCACCCGTGAGGGTGTGACGT
GCCTTCCTCCCCGGGACGGGCTCTTCTGGGCTCAGGCTCCACCGTGTGAAAGCCACTCACTGTA
CAAACTATTTTTTAAGGAAAAAAAAATGGCGTCATCTCCCATGAATTTTTTACAAGATCCATTT
GCCTTCTTGGCCATCGCAGTCCCAGCAGTCCCAGGAGGAACGACGAGTCACATGTGTGGCCGAG
ACTCCCTTGGTAGCTTTGGGGCCCTCTCCGCTGTTGGCCGTGGGGCCATCTGCACATGACTTCG
AGCAGGTCCAGCGTCGCCTCTCAGAGCTGTCTCCTGGCTCCTCAGCAGAACTTGGTCCCCAGCC
ATCTCTTTTTCCGTTCTGTTCTGGGGTTCTAGAACCACTTTCTGCTAGAGCAAGGGACCCCACC
CTGTCAGCTCTTGGCTCCAGGCACCAGCATCCACAACGCCCATCCTCGGTGGGTCCCTGCGGTG
GGATCGGACAACCCCATGGAGAGGAAGCAGAAAGCACTTTTGGGGAAACCTGCTGTCTGCCGCT
AGACAGAGTTCACAGGAGACCAGGGAGGCGGTCCCCGGGCGATGAGGGCTTTTTCATTTCCTCC
TCAGCTGGTAACTCAGGGTTCATCTGTCCAAGGCCTTTCTAATAAACTTACAATCCAGTTAAAA
AAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_036163924 ⟹ XP_036019817

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	4	133,574,601 - 133,615,466 (-)	NCBI

Sequence:

show sequence

CCACGCCTCAGTCGGGATCAGGCCCAGGACGTCCCATGTAAATGTGGGGTGGCAGCCCCTCCCC
CTGGAGGGAGAAGGCACATCTGGGTTAACATCCCAAAGGCTGCTAGGACAGGACAACGGAGGCC
CCAGCGAGGTCTGCAAAGCGGCACAAAGCCCGGGAAAACGGAACCCGCGGAGCCTCCGGTAGCC
AATGGGCGCGGCGGCGCCGGGTGACGGAGCGAGCCGAAGTGCGAGTGCCGCGGCGGCGGCGGAC
GGCCCATCCAGAGCGCGAGGGGCTCAGGGGCGTGCGGGGGTCTCGGTGTAGCAGCAGGGACCCC
GTGGCCCAGAGGCAGCGCTGCCCGGGGCCGCCGGGAGGAGCGCGGGCGGTCCGGCAGCGGCGCG
ATGCCGCTCGCCCAGCTCAAGGAGCCCTGGCCGCTCATGGAGCTGGTGCCGCTGGACCCGGAGA
ATGGCCAGACTTCAGGGGAAGAAGCTGGACTTCAGCCATCCAAGGATGAGGCCATCCTCAAGGA
GATCTCCATCACACACCACGTCAAGGCTGGCTCTGAGAAGGCCGATCCATCCCAGTTTGAGCTC
CTCAAGGTTCTGGGCCAAGGATCCTTTGGCAAAGTCTTCCTGGTACGCAAGGTCACCCGGCCTG
ACAGTGGGCACTTGTATGCCATGAAAGTATTAAAGAAGGCCACGCTGAAAGTGCGTGACCGTGT
TCGGACCAAGATGGAGAGAGACATCCTCGCTGACGTGAACCACCCGTTCGTGGTGAAGCTACAT
TATGCCTTCCAGACCGAGGGCAAGCTCTATCTTATTCTGGACTTCCTGCGTGGTGGAGACCTGT
TCACACGGCTCTCAAAGGAGGTCATGTTTACAGAGGAGGATGTGAAGTTTTACCTGGCTGAGCT
GGCACTGGGCCTGGACCACCTGCACAGCTTGGGCATTATTTACAGAGACCTCAAGCCTGAGAAT
ATCCTTTTGGATGAGGAGGGCCACATCAAACTCACTGACTTTGGCCTGAGCAAGGAGGCCATAG
ACCATGAGAAGAAGGCTTACTCCTTCTGCGGGACAGTGGAGTACATGGCGCCCGAGGTTGTCAA
CCGCCAGGGTCACACCCACAGTGCAGACTGGTGGTCCTATGGGGTGCTGATGTTTGAGATGCTG
ACGGGCTCCCTGCCCTTCCAGGGGAAGGACCGGAAGGAGACCATGACCTTGATTTTGAAGGCGA
AGCTAGGCATGCCCCAGTTTCTGAGCACGGAAGCCCAGAGCCTCCTGCGGGCCCTGTTCAAGAG
GAATCCTGCCAATCGGCTTGGCTCGGGCCCTGATGGGGCAGAGGAAATTAAGAGACATATCTTC
TACTCCACCATTGACTGGAATAAGCTCTACCGGCGTGAGATCAAGCCCCCTTTCAAGCCGGCTG
TGGCCCAGCCCGACGACACCTTCTACTTTGATACCGAGTTCACGTCACGCACACCCAGGGATTC
GCCAGGCATCCCTCCCAGTGCTGGTGCCCATCAGCTGTTCCGTGGCTTCAGCTTCGTGGCCACT
GGTCTGATGGAGGACGACGGCAAGCCTCGGACCACTCAGGCCCCCCTACACTCGGTGGTACAGC
AACTCCACGGGAAGAACTTGGTTTTCAGTGACGGCTACGTAGTAAAGGAGACGATCGGCGTGGG
CTCCTACTCTGTGTGTAAGCGTTGTGTCCACAAGGCCACCAACATGGAGTATGCTGTCAAGGTC
ATCGACAAGAGCAAAAGAGATCCCTCAGAAGAGATTGAGATTCTTCTGCGGTATGGCCAGCACC
CCAACATCATCACCCTGAAAGATGTGTACGATGATGGTAAGCACGTGTACCTGGTGACAGAGCT
GATGAGGGGCGGCGAGCTGCTGGATAAGATCCTACGGCAGAAATTCTTCTCAGAGCGGGAGGCC
AGCTTCGTCCTGCACACGATCAGCAAGACTGTGGAATACTTGCACTCTCAAGGGGTTGTCCACA
GAGATCTCAAACCCAGTAACATCCTCTATGTGGATGAGTCTGGGAACCCCGAGTGCCTGCGCAT
CTGCGACTTTGGCTTTGCCAAGCAGCTACGGGCCGAGAACGGACTCCTCATGACACCTTGCTAC
ACAGCCAACTTTGTGGCACCTGAGGTGCTGAAGCGCCAGGGCTACGATGAAGGCTGTGACATAT
GGAGCCTGGGCATTCTGCTGTACACGATGCTGGCAGGATACACTCCATTTGCCAATGGGCCCAG
TGACACCCCAGAGGAGATCCTCACCCGGATCGGCAGCGGGAAGTTCACCCTCAGTGGGGGAAAC
TGGAACACGGTTTCAGAGACAGCCAAGGACTTGGTATCTAAGATGCTGCATGTGGACCCCCACC
AGCGCCTCACAGCCAAGCAGGTCCTGCAGCACCCATGGATCACCCAGAAAGACAAGCTTCCCCA
GAGCCAGTTGTCCCACCAAGACCTGCAGCTCGTGAAGGGAGCCATGGCGGCTACATACTCTGCT
CTCAATAGCTCCAAACCCACCCCTCAGCTCAAGCCAATTGAGTCGTCTATCCTGGCCCAGCGGC
GGGTGAGGAAGCTGCCATCCACCACCCTGTGAGCCGCAGACGAACTCCTCAGAGGCAGAGTCCT
TCCCAGAGACAGCAAGCCTGGGTCACAGGACCAAGTGGAATGGAGTTCTAAAGGAAGTAACCAG
CCCAGATCACCCGTGAGGGTGTGACGTGCCTTCCTCCCCGGGACGGGCTCTTCTGGGCTCAGGC
TCCACCGTGTGAAAGCCACTCACTGTACAAACTATTTTTTAAGGAAAAAAAAATGGCGTCATCT
CCCATGAATTTTTTACAAGATCCATTTGCCTTCTTGGCCATCGCAGTCCCAGCAGTCCCAGGAG
GAACGACGAGTCACATGTGTGGCCGAGACTCCCTTGGTAGCTTTGGGGCCCTCTCCGCTGTTGG
CCGTGGGGCCATCTGCACATGACTTCGAGCAGGTCCAGCGTCGCCTCTCAGAGCTGTCTCCTGG
CTCCTCAGCAGAACTTGGTCCCCAGCCATCTCTTTTTCCGTTCTGTTCTGGGGTTCTAGAACCA
CTTTCTGCTAGAGCAAGGGACCCCACCCTGTCAGCTCTTGGCTCCAGGCACCAGCATCCACAAC
GCCCATCCTCGGTGGGTCCCTGCGGTGGGATCGGACAACCCCATGGAGAGGAAGCAGAAAGCAC
TTTTGGGGAAACCTGCTGTCTGCCGCTAGACAGAGTTCACAGGAGACCAGGGAGGCGGTCCCCG
GGCGATGAGGGCTTTTTCATTTCCTCCTCAGCTGGTAACTCAGGGTTCATCTGTCCAAGGCCTT
TCTAATAAACTTACAATCCAGTTAAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001272434	(Get FASTA)	NCBI Sequence Viewer
	NP_001272435	(Get FASTA)	NCBI Sequence Viewer
	NP_001365809	(Get FASTA)	NCBI Sequence Viewer
	NP_033123	(Get FASTA)	NCBI Sequence Viewer
	XP_036019817	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAA50300	(Get FASTA)	NCBI Sequence Viewer
	AAD11415	(Get FASTA)	NCBI Sequence Viewer
	AAH49076	(Get FASTA)	NCBI Sequence Viewer
	AAH94470	(Get FASTA)	NCBI Sequence Viewer
	BAE28414	(Get FASTA)	NCBI Sequence Viewer
	BAE39820	(Get FASTA)	NCBI Sequence Viewer
	EDL30047	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000003741
	ENSMUSP00000003741.10
	ENSMUSP00000101514
	ENSMUSP00000101514.5
	ENSMUSP00000119328
	ENSMUSP00000119328.3
	ENSMUSP00000121341.3
	ENSMUSP00000126774
	ENSMUSP00000126774.3
	ENSMUSP00000134507.2
GenBank Protein	P18653	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_033123 ⟸ NM_009097
- Peptide Label:	isoform a
- UniProtKB:	Q505N6 (UniProtKB/TrEMBL), Q3UFZ5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPLAQLKEPWPLMELVPLDPENGQTSGEEAGLQPSKDEAILKEISITHHVKAGSEKADPSQFEL LKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKLH YAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPEN ILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHTHSADWWSYGVLMFEML TGSLPFQGKDRKETMTLILKAKLGMPQFLSTEAQSLLRALFKRNPANRLGSGPDGAEEIKRHIF YSTIDWNKLYRREIKPPFKPAVAQPDDTFYFDTEFTSRTPRDSPGIPPSAGAHQLFRGFSFVAT GLMEDDGKPRTTQAPLHSVVQQLHGKNLVFSDGYVVKETIGVGSYSVCKRCVHKATNMEYAVKV IDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREA SFVLHTISKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGN WNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWITQKDKLPQSQLSHQDLQLVKGAMAATYSA LNSSKPTPQLKPIESSILAQRRVRKLPSTTL hide sequence

RefSeq Acc Id:	NP_001272434 ⟸ NM_001285505
- Peptide Label:	isoform b
- UniProtKB:	P18653 (UniProtKB/Swiss-Prot), Q3UFZ5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPLAQLKEPWPLMELVPLDPENGQTSGEEAGLQPSKDEAILKEISITHHVKAGSEKADPSQFEL LKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKLH YAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPEN ILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHTHSADWWSYGVLMGKDR KETMTLILKAKLGMPQFLSTEAQSLLRALFKRNPANRLGSGPDGAEEIKRHIFYSTIDWNKLYR REIKPPFKPAVAQPDDTFYFDTEFTSRTPRDSPGIPPSAGAHQLFRGFSFVATGLMEDDGKPRT TQAPLHSVVQQLHGKNLVFSDGYVVKETIGVGSYSVCKRCVHKATNMEYAVKVIDKSKRDPSEE IEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTISKTV EYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLK RQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDL VSKMLHVDPHQRLTAKQVLQHPWITQKDKLPQSQLSHQDLQLVKGAMAATYSALNSSKPTPQLK PIESSILAQRRVRKLPSTTL hide sequence

RefSeq Acc Id:	NP_001272435 ⟸ NM_001285506
- Peptide Label:	isoform c
- UniProtKB:	E9PWV3 (UniProtKB/TrEMBL), Q3TIM6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MQTPADFPRVERDSGFYPRKDEAILKEISITHHVKAGSEKADPSQFELLKVLGQGSFGKVFLVR KVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKLHYAFQTEGKLYLILDFL RGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGL SKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHTHSADWWSYGVLMFEMLTGSLPFQGKDRKETMT LILKAKLGMPQFLSTEAQSLLRALFKRNPANRLGSGPDGAEEIKRHIFYSTIDWNKLYRREIKP PFKPAVAQPDDTFYFDTEFTSRTPRDSPGIPPSAGAHQLFRGFSFVATGLMEDDGKPRTTQAPL HSVVQQLHGKNLVFSDGYVVKETIGVGSYSVCKRCVHKATNMEYAVKVIDKSKRDPSEEIEILL RYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTISKTVEYLHS QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYD EGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKML HVDPHQRLTAKQVLQHPWITQKDKLPQSQLSHQDLQLVKGAMAATYSALNSSKPTPQLKPIESS ILAQRRVRKLPSTTL hide sequence

RefSeq Acc Id:	NP_001365809 ⟸ NM_001378880
- Peptide Label:	isoform d
- UniProtKB:	F6Q8A4 (UniProtKB/TrEMBL), Q3TIM6 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSMUSP00000101514 ⟸ ENSMUST00000105894

RefSeq Acc Id:

ENSMUSP00000134507 ⟸ ENSMUST00000174481

RefSeq Acc Id:

ENSMUSP00000003741 ⟸ ENSMUST00000003741

RefSeq Acc Id:

ENSMUSP00000126774 ⟸ ENSMUST00000168974

RefSeq Acc Id:

ENSMUSP00000119328 ⟸ ENSMUST00000137486

RefSeq Acc Id:

ENSMUSP00000121341 ⟸ ENSMUST00000157067

RefSeq Acc Id:	XP_036019817 ⟸ XM_036163924
- Peptide Label:	isoform X1
- UniProtKB:	Q505N6 (UniProtKB/TrEMBL), Q3UFZ5 (UniProtKB/TrEMBL)

Protein Domains

AGC-kinase C-terminal Protein kinase

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-P18653-F1-model_v2	AlphaFold	P18653	1-724	view protein structure

Promoters

RGD ID:

6836323

Promoter ID:

MM_KWN:40043

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

BoneMarrow_0Hour, Brain, Kidney, Lung

Transcripts:

OTTMUST00000022378

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	4	133,416,509 - 133,417,009 (-)	MPROMDB

RGD ID:

6836324

Promoter ID:

MM_KWN:40045

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

BoneMarrow_0Hour, BoneMarrow_4Hour, Liver

Transcripts:

UC008VDL.1

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	4	133,428,021 - 133,429,032 (-)	MPROMDB

RGD ID:

6836321

Promoter ID:

MM_KWN:40046

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Lung, Spleen

Transcripts:

OTTMUST00000022377

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	4	133,428,771 - 133,429,572 (-)	MPROMDB

RGD ID:

6836325

Promoter ID:

MM_KWN:40047

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain

Transcripts:

OTTMUST00000022376, UC008VDM.1

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	4	133,430,084 - 133,430,584 (-)	MPROMDB

RGD ID:

6836326

Promoter ID:

MM_KWN:40048

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

Kidney

Transcripts:

UC008VDP.1

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	4	133,436,861 - 133,437,712 (-)	MPROMDB

RGD ID:

6836318

Promoter ID:

MM_KWN:40050

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, 3T3L1_Day2, 3T3L1_Day3, 3T3L1_Day6, BoneMarrow_0Hour, BoneMarrow_2Hour, Brain, ES_Cell, Kidney, Liver, Lung, MEF_B4, Spleen

Transcripts:

OTTMUST00000022181, OTTMUST00000022256, UC008VDK.1

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	4	133,443,556 - 133,444,237 (-)	MPROMDB

RGD ID:

6884976

Promoter ID:

EPDNEW_M5939

Type:

initiation region

Name:

Rps6ka1_3

Description:

Mus musculus ribosomal protein S6 kinase polypeptide 1 , transcriptvariant 2, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_M5940 EPDNEW_M5941

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	4	133,873,035 - 133,873,095	EPDNEW

RGD ID:

6884978

Promoter ID:

EPDNEW_M5940

Type:

initiation region

Name:

Rps6ka1_2

Description:

Mus musculus ribosomal protein S6 kinase polypeptide 1 , transcriptvariant 2, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_M5939 EPDNEW_M5941

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	4	133,874,701 - 133,874,761	EPDNEW

RGD ID:

6884986

Promoter ID:

EPDNEW_M5941

Type:

initiation region

Name:

Rps6ka1_1

Description:

Mus musculus ribosomal protein S6 kinase polypeptide 1 , transcriptvariant 2, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_M5939 EPDNEW_M5940

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	4	133,887,789 - 133,887,849	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:104558	AgrOrtholog
Ensembl Genes	ENSMUSG00000003644	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000003741	ENTREZGENE
	ENSMUST00000003741.16	UniProtKB/Swiss-Prot
	ENSMUST00000105894	ENTREZGENE
	ENSMUST00000105894.11	UniProtKB/TrEMBL
	ENSMUST00000137486	ENTREZGENE
	ENSMUST00000137486.3	UniProtKB/TrEMBL
	ENSMUST00000157067.9	UniProtKB/TrEMBL
	ENSMUST00000168974	ENTREZGENE
	ENSMUST00000168974.9	UniProtKB/TrEMBL
	ENSMUST00000174481.8	UniProtKB/TrEMBL
Gene3D-CATH	Transferase(Phosphotransferase) domain 1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	AGC-kinase_C	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Kinase-like_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Pkinase_C	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Prot_kinase_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Protein_kinase_ATP_BS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Ribosomal_S6_kinase_II	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	RSK_N	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Ser/Thr_kinase_AS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:20111	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD	MGI:104558	ENTREZGENE
NCBI Gene	20111	ENTREZGENE
PANTHER	CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE	UniProtKB/TrEMBL
	RIBOSOMAL PROTEIN S6 KINASE	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	RIBOSOMAL PROTEIN S6 KINASE ALPHA-1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	Pkinase	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Pkinase_C	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Rps6ka1	PhenoGen
PIRSF	Ribsml_S6_kin_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	AGC_KINASE_CTER	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PROTEIN_KINASE_ATP	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PROTEIN_KINASE_DOM	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PROTEIN_KINASE_ST	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	S_TK_X	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	S_TKc	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF56112	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	E9PWV3	ENTREZGENE, UniProtKB/TrEMBL
	F6Q8A4	ENTREZGENE, UniProtKB/TrEMBL
	F6RQA2_MOUSE	UniProtKB/TrEMBL
	G3UZI3_MOUSE	UniProtKB/TrEMBL
	KS6A1_MOUSE	UniProtKB/Swiss-Prot, ENTREZGENE
	Q3TIM6	ENTREZGENE, UniProtKB/TrEMBL
	Q3UFZ5	ENTREZGENE, UniProtKB/TrEMBL
	Q505N6	ENTREZGENE, UniProtKB/TrEMBL
	Q810V8_MOUSE	UniProtKB/TrEMBL
	Q9Z278_MOUSE	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

RGD Manual Annotations

Imported Annotations - SMPDB

Imported Annotations - KEGG (archival)

Imported Annotations - PID (archival)

Mammalian Phenotype

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

RGD Manual Annotations

Imported Annotations - SMPDB

Imported Annotations - KEGG (archival)

Imported Annotations - PID (archival)

Mammalian Phenotype